Rmu_sc0009208.1_g000009

Serine carboxypeptidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009208.1
Physical Location & Seq
Reverse (-)
16634 .. 21685
5052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009208.1_g000009.1.cds

Sequence Viewer

Length: 633 bp
atgggcctagttcttattcttgctgggtctggtttgggctgtggccttagggtttccataccttgggctctttggatcaggcttgctttggatggtgatgtgggcgtcatggactcgggtagaattggaaggggagtctgctactcctcttctgaaaagtacattggggttgatgagaaagatgatgtgcagttcttctattactttgttgaatctgaaagaaatcccagggatgatcctcttttgctctggctcactggtggtccttcttgctctgctctaagtggacttgcttttgagataggccccataaagttcaacatggttgagtataatggtagcttgccgacctttgttcttaatcccaactcatggacaaaggtaaccacttgcgccaccagtggcgacgatcctaagcctgcgcttgccgaggctggcggggaccttgcaggcattgtgggggaggtcggtggagaaggaggcggtgttgattatgtcgtgaacggaggagaaggatctagggatgcagggattgggctcggaagggagagagtgggctggaggatgaagaaggtggagccgaaaagaatgccaacgaggatgaagaggaggtgttgctctttgaagatgtag
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

210

Amino Acids

22.49

Weight (kDa)

5.65

Isoelectric Point (pI)

31.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 63, 372
AciI CCGC 2 cut(s) 438, 483
AclWI GGATC 4 cut(s) 83, 230, 404, 523
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 1 cut(s) 161
AfiI CCNNNNNNNGG 2 cut(s) 63, 372
AgsI TTSAA 3 cut(s) 212, 319, 625
AjnI CCWGG 1 cut(s) 227
AjuI GAANNNNNNNTTGG 2 cut(s) 147, 179
AluBI AGCT 1 cut(s) 342
AluI AGCT 1 cut(s) 342
AlwI GGATC 4 cut(s) 83, 230, 404, 523
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 3 cut(s) 4, 43, 304
AspLEI GCGC 2 cut(s) 395, 424
AspS9I GGNCC 4 cut(s) 4, 263, 305, 442
AsuHPI GGTGA 1 cut(s) 107
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 2 cut(s) 263, 442
AxyI CCTNAGG 1 cut(s) 47
BanII GRGCYC 2 cut(s) 70, 540
BccI CCATC 1 cut(s) 86
BcgI CGANNNNNNTGC 2 cut(s) 571, 605
BciT130I CCWGG 1 cut(s) 229
BfaI CTAG 2 cut(s) 8, 519
Bme1390I CCNGG 1 cut(s) 229
Bme18I GGWCC 2 cut(s) 263, 442
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 4 cut(s) 4, 263, 305, 442
BmiI GGNNCC 3 cut(s) 307, 443, 579
BmrFI CCNGG 1 cut(s) 229
BmsI GCATC 1 cut(s) 514
BpmI CTGGAG 1 cut(s) 580
Bpu10I CCTNAGC 1 cut(s) 414
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 4 cut(s) 62, 227, 228, 429
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 2 cut(s) 63, 372
Bse1I ACTGG 2 cut(s) 262, 399
Bse21I CCTNAGG 1 cut(s) 47
BseBI CCWGG 1 cut(s) 229
BseDI CCNNGG 4 cut(s) 62, 227, 228, 429
BseGI GGATG 5 cut(s) 97, 238, 529, 570, 606
BseLI CCNNNNNNNGG 2 cut(s) 63, 372
BseNI ACTGG 2 cut(s) 262, 399
BseRI GAGGAG 3 cut(s) 136, 522, 622
BseYI CCCAGC 1 cut(s) 23
BsgI GTGCAG 1 cut(s) 209
BshFI GGCC 3 cut(s) 6, 45, 306
BsiHKCI CYCGRG 1 cut(s) 115
BslFI GGGAC 1 cut(s) 455
BslI CCNNNNNNNGG 2 cut(s) 63, 372
BsmFI GGGAC 1 cut(s) 455
BsmI GAATGC 1 cut(s) 594
BsnI GGCC 3 cut(s) 6, 45, 306
BsoBI CYCGRG 1 cut(s) 115
Bsp1286I GDGCHC 2 cut(s) 70, 540
Bsp143I GATC 4 cut(s) 75, 235, 409, 515
BspACI CCGC 2 cut(s) 438, 483
BspANI GGCC 3 cut(s) 6, 45, 306
BspLI GGNNCC 3 cut(s) 307, 443, 579
BspPI GGATC 4 cut(s) 83, 230, 404, 523
BsrI ACTGG 2 cut(s) 262, 399
BssECI CCNNGG 4 cut(s) 62, 227, 228, 429
BssMI GATC 4 cut(s) 75, 235, 409, 515
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 62
Bst2UI CCWGG 1 cut(s) 229
Bst6I CTCTTC 2 cut(s) 154, 599
BstACI GRCGYC 1 cut(s) 105
BstC8I GCNNGC 6 cut(s) 84, 344, 420, 426, 436, 451
BstDEI CTNAG 3 cut(s) 47, 281, 414
BstEII GGTNACC 1 cut(s) 382
BstF5I GGATG 5 cut(s) 97, 238, 529, 570, 606
BstHHI GCGC 2 cut(s) 395, 424
BstKTI GATC 4 cut(s) 78, 238, 412, 518
BstMBI GATC 4 cut(s) 75, 235, 409, 515
BstNI CCWGG 1 cut(s) 229
BstPI GGTNACC 1 cut(s) 382
BstSCI CCNGG 1 cut(s) 227
BstX2I RGATCY 1 cut(s) 515
BstYI RGATCY 1 cut(s) 515
Bsu36I CCTNAGG 1 cut(s) 47
BsuRI GGCC 3 cut(s) 6, 45, 306
BtsCI GGATG 5 cut(s) 97, 238, 529, 570, 606
BtsIMutI CAGTG 2 cut(s) 255, 406
Cac8I GCNNGC 6 cut(s) 84, 344, 420, 426, 436, 451
CfoI GCGC 2 cut(s) 395, 424
Cfr13I GGNCC 4 cut(s) 4, 263, 305, 442
CseI GACGC 1 cut(s) 94
Csp6I GTAC 1 cut(s) 160
CviAII CATG 3 cut(s) 109, 322, 372
CviQI GTAC 1 cut(s) 160
DdeI CTNAG 3 cut(s) 47, 281, 414
DpnI GATC 4 cut(s) 77, 237, 411, 517
DpnII GATC 4 cut(s) 75, 235, 409, 515
Eam1104I CTCTTC 2 cut(s) 154, 599
EarI CTCTTC 2 cut(s) 154, 599
Eco130I CCWWGG 1 cut(s) 62
Eco24I GRGCYC 2 cut(s) 70, 540
Eco47I GGWCC 2 cut(s) 263, 442
Eco81I CCTNAGG 1 cut(s) 47
Eco88I CYCGRG 1 cut(s) 115
Eco91I GGTNACC 1 cut(s) 382
EcoO109I RGGNCCY 2 cut(s) 305, 442
EcoO65I GGTNACC 1 cut(s) 382
EcoRII CCWGG 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 62
EcoT38I GRGCYC 2 cut(s) 70, 540
ErhI CCWWGG 1 cut(s) 62
FaeI CATG 3 cut(s) 112, 325, 375
FaiI YATR 7 cut(s) 59, 110, 311, 323, 333, 373, 495
FaqI GGGAC 1 cut(s) 455
FatI CATG 3 cut(s) 108, 321, 371
FauI CCCGC 1 cut(s) 431
FokI GGATG 5 cut(s) 104, 245, 536, 577, 613
FriOI GRGCYC 2 cut(s) 70, 540
FspBI CTAG 2 cut(s) 8, 519
GlaI GCGC 2 cut(s) 394, 423
GsaI CCCAGC 1 cut(s) 27
GsuI CTGGAG 1 cut(s) 580
HaeIII GGCC 3 cut(s) 6, 45, 306
HgaI GACGC 1 cut(s) 94
HhaI GCGC 2 cut(s) 395, 424
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 3 cut(s) 112, 325, 375
Hin6I GCGC 2 cut(s) 393, 422
HinP1I GCGC 2 cut(s) 393, 422
HinfI GANTC 3 cut(s) 113, 135, 212
HphI GGTGA 1 cut(s) 107
Hpy166II GTNNAC 2 cut(s) 287, 502
Hpy188I TCNGA 3 cut(s) 154, 217, 542
Hpy188III TCNNGA 1 cut(s) 499
Hpy8I GTNNAC 2 cut(s) 287, 502
Hpy99I CGWCG 1 cut(s) 410
HpyAV CCTTC 6 cut(s) 123, 276, 470, 506, 537, 565
HpyCH4V TGCA 3 cut(s) 190, 449, 527
HpyF3I CTNAG 3 cut(s) 47, 281, 414
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 3 cut(s) 112, 325, 375
HspAI GCGC 2 cut(s) 393, 422
Kzo9I GATC 4 cut(s) 75, 235, 409, 515
LmnI GCTCC 1 cut(s) 577
LweI GCATC 1 cut(s) 514
MaeI CTAG 2 cut(s) 8, 519
MaeIII GTNAC 1 cut(s) 382
MalI GATC 4 cut(s) 77, 237, 411, 517
MboI GATC 4 cut(s) 75, 235, 409, 515
MboII GAAGA 4 cut(s) 141, 187, 580, 616
MflI RGATCY 1 cut(s) 515
MhlI GDGCHC 2 cut(s) 70, 540
MluCI AATT 1 cut(s) 123
MlyI GAGTC 2 cut(s) 107, 144
MseI TTAA 1 cut(s) 360
MspR9I CCNGG 1 cut(s) 229
Mva1269I GAATGC 1 cut(s) 594
MvaI CCWGG 1 cut(s) 229
NdeII GATC 4 cut(s) 75, 235, 409, 515
NlaIII CATG 3 cut(s) 112, 325, 375
NlaIV GGNNCC 3 cut(s) 307, 443, 579
NmeAIII GCCGAG 1 cut(s) 454
PasI CCCWGGG 1 cut(s) 228
PctI GAATGC 1 cut(s) 594
PfeI GAWTC 1 cut(s) 212
PflMI CCANNNNNTGG 2 cut(s) 63, 372
PleI GAGTC 2 cut(s) 107, 143
PpsI GAGTC 2 cut(s) 107, 143
PpuMI RGGWCCY 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 1 cut(s) 227
PspEI GGTNACC 1 cut(s) 382
PspFI CCCAGC 1 cut(s) 23
PspGI CCWGG 1 cut(s) 227
PspN4I GGNNCC 3 cut(s) 307, 443, 579
PspPI GGNCC 4 cut(s) 4, 263, 305, 442
PspPPI RGGWCCY 1 cut(s) 442
PsuI RGATCY 1 cut(s) 515
RsaI GTAC 1 cut(s) 161
RsaNI GTAC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 360
Sau3AI GATC 4 cut(s) 75, 235, 409, 515
Sau96I GGNCC 4 cut(s) 4, 263, 305, 442
SchI GAGTC 2 cut(s) 107, 144
ScrFI CCNGG 1 cut(s) 229
SduI GDGCHC 2 cut(s) 70, 540
SetI ASST 8 cut(s) 64, 344, 353, 384, 447, 468, 576, 614
SfaNI GCATC 1 cut(s) 514
SinI GGWCC 2 cut(s) 263, 442
Sse9I AATT 1 cut(s) 123
SsiI CCGC 2 cut(s) 438, 483
SspMI CTAG 2 cut(s) 8, 519
StyD4I CCNGG 1 cut(s) 227
StyI CCWWGG 1 cut(s) 62
TasI AATT 1 cut(s) 123
TatI WGTACW 1 cut(s) 159
TfiI GAWTC 1 cut(s) 212
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TscAI CASTG 2 cut(s) 262, 406
TspDTI ATGAA 2 cut(s) 581, 617
TspGWI ACGGA 1 cut(s) 519
TspRI CASTG 2 cut(s) 262, 406
Van91I CCANNNNNTGG 2 cut(s) 63, 372
VpaK11BI GGWCC 2 cut(s) 263, 442
XspI CTAG 2 cut(s) 8, 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.