RchiOBHm_Chr6g0249011

Serine carboxypeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000102
Physical Location & Seq
Forward (+)
4859561 .. 4863616
4056 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22322

Sequence Viewer

Length: 1404 bp
ATGGCACCACTCACTATGTGTTTGAGTGTGCTTCTCTTATTGGCATTCTCAGGCATCGCCACTTCTCAGACAATCGTTGAGACTCTGCCTGGGTGGAATGGGACACTTCCCTTCAAACTTGAAACAGGTTACATTGCGGTGGATGATTTGGATGAGGTGCAACTATTCTACTATTTTGTCGAGTCGGAGAGAAACCCAATTGAAGATCCCCTTATGCTTTGGCTTACTGGAGGCCCTGGATGTTCCGGGTTTTCTGCAATGGCTTATGAAATTGGTCCATTTAGTTTTGATCTGCATTACAATGGAAGCATACCCAATATAATTATGAATCCATATTCATGGACCAAGGTGGCCAACATAATCTTTATAGATGCACCAGTTGGTGCTGGGTTTTCATACTCTACAACCTCGGAAGGGTACTATACTTCCGATACAAAATCAGCTGCACAGACCTATACTTTCTTAAGAAAGTGGTTATATGCACACCCAAGTTTTCAGGGAAATCAACTGTACATTGGTGGTGACTCATATTCAGGACTTATTGTTCCCATTCTTCTTAAGAATATACTAGAAGGTTTAGAGTCTGGGTTAAGGCCAAGAATGCAACTCCAAGGATACTTGCTTGGAAATCCAGTTTCAGATTCTTTTATTGATGTAAATGAGAGAATCCCATATGTTCACCGAGTGTCACTCATTTCAGATGAAATCTATGAGGCTGCTAAAACTAATTGCAGTGGGGACTATGTCAATGTGGAACTTAACAATACACTTTGTGTTACTGCTCTTCAAAAAATTAAAGATTGTCTTCTACAAATAAATCTTGCACAAATTTTGGAACCCCAATGTGCTTTTGCATCTGGTAGAACAACTGAGTTGGAGTGGGATCTTAGAGTTCGAGAAGCAAGTACTATGGATTACCTCCTTTCAGAGTCTAAGCTACCTGAATTGCCTTGCCGGGGATATACATATGTGCTTGCCTATAGGTGGATGAACGATGAAACAGTTCGGGCAGCTCTAGGTGTTCGAAATGGAACAGTAGAGAATTGGGTACGATGCCCCAAGGCCTTGGCATACTACACAGAAGACATCACAAGTTCTCTTGCGTATCAGAAAAATCTATCAGAAACAGGTCTTCGAGCTTTGATATACAGTGGTGATCATGACATATCAGTTCCATGGATTGCTACACAATATTGGATCAATGCTCTTGATATAGCTGTTTTTGATGAATGGCGACCGTGGTATGTCAACGGTCAAATTGCAGGATACCAAGTGAAGTTCATGAATGATCACTTCAGGTTGACTTACGTGACTGTAAAGGGTGCTGGTCACACTGCTCCAGAGTACAAACACAAGGAAACACTTGCCATGTTTGACAGATTTTTAGCACGTTACCCGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

467

Amino Acids

52.68

Weight (kDa)

4.92

Isoelectric Point (pI)

30.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 30 - 463 1e-120 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AciI CCGC 1 cut(s) 137
AclWI GGATC 3 cut(s) 200, 891, 1205
AcoI YGGCCR 1 cut(s) 351
AcsI RAATTY 1 cut(s) 828
AcuI CTGAAG 1 cut(s) 1279
AdeI CACNNNGTG 3 cut(s) 18, 685, 773
AfaI GTAC 5 cut(s) 419, 512, 907, 1050, 1346
AfiI CCNNNNNNNGG 3 cut(s) 414, 956, 984
AflII CTTAAG 2 cut(s) 463, 557
AgsI TTSAA 4 cut(s) 115, 122, 203, 788
AjnI CCWGG 2 cut(s) 88, 235
AloI GAACNNNNNNTCC 2 cut(s) 528, 560
AluBI AGCT 5 cut(s) 443, 937, 1013, 1139, 1217
AluI AGCT 5 cut(s) 443, 937, 1013, 1139, 1217
Alw26I GTCTC 1 cut(s) 74
AlwI GGATC 3 cut(s) 200, 891, 1205
AoxI GGCC 4 cut(s) 232, 351, 593, 1062
ApeKI GCWGC 3 cut(s) 443, 716, 1010
ApoI RAATTY 1 cut(s) 828
Asp700I GAANNNNTTC 1 cut(s) 1002
AspS9I GGNCC 3 cut(s) 233, 275, 342
AsuC2I CCSGG 2 cut(s) 247, 956
AsuHPI GGTGA 3 cut(s) 533, 671, 1166
AsuII TTCGAA 1 cut(s) 1024
AvaII GGWCC 2 cut(s) 275, 342
BalI TGGCCA 1 cut(s) 353
BanI GGYRCC 1 cut(s) 4
BbsI GAAGAC 3 cut(s) 797, 1089, 1124
BbvI GCAGC 3 cut(s) 430, 703, 1022
BciT130I CCWGG 2 cut(s) 90, 237
BciVI GTATCC 2 cut(s) 608, 1259
BclI TGATCA 2 cut(s) 1156, 1288
BcnI CCSGG 2 cut(s) 247, 956
BcoDI GTCTC 1 cut(s) 74
BfaI CTAG 3 cut(s) 569, 1016, 1402
BfmI CTRYAG 1 cut(s) 979
BfrI CTTAAG 2 cut(s) 463, 557
BfuI GTATCC 2 cut(s) 608, 1259
BisI GCNGC 3 cut(s) 444, 717, 1011
BlsI GCNGC 3 cut(s) 445, 718, 1012
BmcAI AGTACT 1 cut(s) 907
Bme1390I CCNGG 4 cut(s) 90, 237, 247, 956
Bme18I GGWCC 2 cut(s) 275, 342
BmgT120I GGNCC 3 cut(s) 233, 275, 342
BmiI GGNNCC 2 cut(s) 6, 837
BmrFI CCNGG 4 cut(s) 90, 237, 247, 956
BmsI GCATC 4 cut(s) 63, 361, 863, 1043
BpiI GAAGAC 3 cut(s) 797, 1089, 1124
BplI GAGNNNNNCTC 2 cut(s) 675, 707
BpmI CTGGAG 2 cut(s) 249, 1323
Bpu14I TTCGAA 1 cut(s) 1024
BpuMI CCSGG 2 cut(s) 247, 956
BsaAI YACGTR 1 cut(s) 1309
Bsc4I CCNNNNNNNGG 3 cut(s) 414, 956, 984
Bse1I ACTGG 3 cut(s) 232, 377, 632
Bse3DI GCAATG 2 cut(s) 132, 264
BseBI CCWGG 2 cut(s) 90, 237
BseGI GGATG 4 cut(s) 148, 157, 245, 993
BseLI CCNNNNNNNGG 3 cut(s) 414, 956, 984
BseMI GCAATG 2 cut(s) 132, 264
BseMII CTCAG 3 cut(s) 63, 80, 861
BseNI ACTGG 3 cut(s) 232, 377, 632
BseXI GCAGC 3 cut(s) 430, 703, 1022
BseYI CCCAGC 1 cut(s) 386
BsgI GTGCAG 1 cut(s) 429
Bsh1285I CGRYCG 1 cut(s) 1238
BshFI GGCC 4 cut(s) 234, 353, 595, 1064
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 1238
BsiSI CCGG 2 cut(s) 246, 955
BslFI GGGAC 2 cut(s) 115, 752
BslI CCNNNNNNNGG 3 cut(s) 414, 956, 984
BsmAI GTCTC 1 cut(s) 74
BsmFI GGGAC 2 cut(s) 115, 752
BsmI GAATGC 2 cut(s) 44, 606
BsnI GGCC 4 cut(s) 234, 353, 595, 1064
Bsp119I TTCGAA 1 cut(s) 1024
Bsp1407I TGTACA 1 cut(s) 510
Bsp143I GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
Bsp19I CCATGG 1 cut(s) 1175
BspACI CCGC 1 cut(s) 137
BspANI GGCC 4 cut(s) 234, 353, 595, 1064
BspCNI CTCAG 3 cut(s) 62, 79, 862
BspHI TCATGA 2 cut(s) 1159, 1281
BspLI GGNNCC 2 cut(s) 6, 837
BspPI GGATC 3 cut(s) 200, 891, 1205
BspQI GCTCTTC 1 cut(s) 789
BspT104I TTCGAA 1 cut(s) 1024
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 2 cut(s) 463, 557
BsrDI GCAATG 2 cut(s) 132, 264
BsrGI TGTACA 1 cut(s) 510
BsrI ACTGG 3 cut(s) 232, 377, 632
BssMI GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
BssT1I CCWWGG 5 cut(s) 345, 610, 1059, 1065, 1175
Bst2UI CCWGG 2 cut(s) 90, 237
Bst4CI ACNGT 7 cut(s) 510, 1003, 1036, 1151, 1239, 1253, 1315
Bst6I CTCTTC 1 cut(s) 789
BstAFI CTTAAG 2 cut(s) 463, 557
BstAUI TGTACA 1 cut(s) 510
BstBAI YACGTR 1 cut(s) 1309
BstBI TTCGAA 1 cut(s) 1024
BstC8I GCNNGC 1 cut(s) 975
BstDEI CTNAG 5 cut(s) 49, 66, 870, 887, 933
BstDSI CCRYGG 2 cut(s) 1175, 1238
BstF5I GGATG 4 cut(s) 148, 157, 245, 993
BstKTI GATC 7 cut(s) 208, 292, 886, 1159, 1200, 1291, 1401
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
BstMCI CGRYCG 1 cut(s) 1238
BstMWI GCNNNNNNNGC 1 cut(s) 601
BstNI CCWGG 2 cut(s) 90, 237
BstSCI CCNGG 4 cut(s) 88, 235, 245, 954
BstSFI CTRYAG 1 cut(s) 979
BstV1I GCAGC 3 cut(s) 430, 703, 1022
BstV2I GAAGAC 3 cut(s) 797, 1089, 1124
BstX2I RGATCY 2 cut(s) 205, 883
BstXI CCANNNNNNTGG 2 cut(s) 339, 1066
BstYI RGATCY 2 cut(s) 205, 883
BsuI GTATCC 2 cut(s) 608, 1259
BsuRI GGCC 4 cut(s) 234, 353, 595, 1064
BtgI CCRYGG 2 cut(s) 1175, 1238
BtgZI GCGATG 1 cut(s) 40
BtsCI GGATG 4 cut(s) 148, 157, 245, 993
BtsI GCAGTG 2 cut(s) 739, 1332
BtsIMutI CAGTG 3 cut(s) 739, 1156, 1332
Cac8I GCNNGC 1 cut(s) 975
CciI TCATGA 2 cut(s) 1159, 1281
Cfr13I GGNCC 3 cut(s) 233, 275, 342
Csp6I GTAC 5 cut(s) 418, 511, 906, 1049, 1345
CviAII CATG 5 cut(s) 339, 1160, 1176, 1282, 1369
CviQI GTAC 5 cut(s) 418, 511, 906, 1049, 1345
DdeI CTNAG 5 cut(s) 49, 66, 870, 887, 933
DpnI GATC 7 cut(s) 207, 291, 885, 1158, 1199, 1290, 1400
DpnII GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
DraIII CACNNNGTG 3 cut(s) 18, 685, 773
EaeI YGGCCR 1 cut(s) 351
Eam1104I CTCTTC 1 cut(s) 789
EarI CTCTTC 1 cut(s) 789
Eco130I CCWWGG 5 cut(s) 345, 610, 1059, 1065, 1175
Eco147I AGGCCT 1 cut(s) 1064
Eco47I GGWCC 2 cut(s) 275, 342
Eco57I CTGAAG 1 cut(s) 1279
EcoO109I RGGNCCY 1 cut(s) 233
EcoRII CCWGG 2 cut(s) 88, 235
EcoT14I CCWWGG 5 cut(s) 345, 610, 1059, 1065, 1175
ErhI CCWWGG 5 cut(s) 345, 610, 1059, 1065, 1175
FaeI CATG 5 cut(s) 342, 1163, 1179, 1285, 1372
FalI AAGNNNNNCTT 4 cut(s) 195, 227, 789, 821
FaqI GGGAC 2 cut(s) 115, 752
FatI CATG 5 cut(s) 338, 1159, 1175, 1281, 1368
FauNDI CATATG 2 cut(s) 673, 967
FbaI TGATCA 2 cut(s) 1156, 1288
Fnu4HI GCNGC 3 cut(s) 444, 717, 1011
FokI GGATG 4 cut(s) 155, 164, 252, 1000
Fsp4HI GCNGC 3 cut(s) 444, 717, 1011
FspBI CTAG 3 cut(s) 569, 1016, 1402
GluI GCNGC 3 cut(s) 444, 717, 1011
GsaI CCCAGC 1 cut(s) 390
GsuI CTGGAG 2 cut(s) 249, 1323
HaeIII GGCC 4 cut(s) 234, 353, 595, 1064
HapII CCGG 2 cut(s) 246, 955
Hin1II CATG 5 cut(s) 342, 1163, 1179, 1285, 1372
HincII GTYRAC 2 cut(s) 1249, 1302
HindII GTYRAC 2 cut(s) 1249, 1302
HinfI GANTC 8 cut(s) 82, 182, 328, 524, 581, 641, 666, 929
HpaII CCGG 2 cut(s) 246, 955
HphI GGTGA 3 cut(s) 533, 671, 1166
Hpy166II GTNNAC 3 cut(s) 679, 1249, 1302
Hpy188I TCNGA 9 cut(s) 69, 187, 412, 430, 640, 700, 928, 1110, 1123
Hpy188III TCNNGA 6 cut(s) 534, 896, 1160, 1208, 1282, 1340
Hpy8I GTNNAC 3 cut(s) 679, 1249, 1302
HpyAV CCTTC 3 cut(s) 121, 407, 566
HpyCH4III ACNGT 7 cut(s) 510, 1003, 1036, 1151, 1239, 1253, 1315
HpyCH4IV ACGT 2 cut(s) 1308, 1390
HpyF10VI GCNNNNNNNGC 1 cut(s) 601
HpyF3I CTNAG 5 cut(s) 49, 66, 870, 887, 933
HpySE526I ACGT 2 cut(s) 1308, 1390
Hsp92II CATG 5 cut(s) 342, 1163, 1179, 1285, 1372
Ksp22I TGATCA 2 cut(s) 1156, 1288
Kzo9I GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
LguI GCTCTTC 1 cut(s) 789
LmnI GCTCC 1 cut(s) 1342
Lsp1109I GCAGC 3 cut(s) 430, 703, 1022
LweI GCATC 4 cut(s) 63, 361, 863, 1043
MaeI CTAG 3 cut(s) 569, 1016, 1402
MaeII ACGT 2 cut(s) 1308, 1390
MaeIII GTNAC 7 cut(s) 128, 521, 687, 775, 1309, 1328, 1391
MalI GATC 7 cut(s) 207, 291, 885, 1158, 1199, 1290, 1400
MboI GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
MboII GAAGA 6 cut(s) 215, 545, 776, 797, 1094, 1124
MfeI CAATTG 1 cut(s) 198
MflI RGATCY 2 cut(s) 205, 883
MlsI TGGCCA 1 cut(s) 353
MluCI AATT 9 cut(s) 198, 270, 321, 727, 792, 828, 944, 1042, 1257
MluNI TGGCCA 1 cut(s) 353
MlyI GAGTC 5 cut(s) 76, 191, 518, 590, 938
MmeI TCCRAC 2 cut(s) 165, 855
MnlI CCTC 5 cut(s) 148, 224, 418, 706, 929
Mox20I TGGCCA 1 cut(s) 353
MroXI GAANNNNTTC 1 cut(s) 1002
MscI TGGCCA 1 cut(s) 353
MseI TTAA 5 cut(s) 464, 558, 590, 759, 795
MslI CAYNNNNRTG 3 cut(s) 137, 300, 337
Msp20I TGGCCA 1 cut(s) 353
MspA1I CMGCKG 1 cut(s) 443
MspCI CTTAAG 2 cut(s) 463, 557
MspI CCGG 2 cut(s) 246, 955
MspR9I CCNGG 4 cut(s) 90, 237, 247, 956
MunI CAATTG 1 cut(s) 198
Mva1269I GAATGC 2 cut(s) 44, 606
MvaI CCWGG 2 cut(s) 90, 237
MwoI GCNNNNNNNGC 1 cut(s) 601
NciI CCSGG 2 cut(s) 247, 956
NcoI CCATGG 1 cut(s) 1175
NdeI CATATG 2 cut(s) 673, 967
NdeII GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
NlaIII CATG 5 cut(s) 342, 1163, 1179, 1285, 1372
NlaIV GGNNCC 2 cut(s) 6, 837
NmuCI GTSAC 4 cut(s) 521, 687, 1309, 1328
NspV TTCGAA 1 cut(s) 1024
PagI TCATGA 2 cut(s) 1159, 1281
PceI AGGCCT 1 cut(s) 1064
PciSI GCTCTTC 1 cut(s) 789
PctI GAATGC 2 cut(s) 44, 606
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 3 cut(s) 328, 641, 666
PflFI GACNNNGTC 1 cut(s) 743
PkrI GCNGC 3 cut(s) 445, 718, 1012
PleI GAGTC 5 cut(s) 76, 190, 518, 589, 937
PpsI GAGTC 5 cut(s) 76, 190, 518, 589, 937
Ppu21I YACGTR 1 cut(s) 1309
Psp6I CCWGG 2 cut(s) 88, 235
PspFI CCCAGC 1 cut(s) 386
PspGI CCWGG 2 cut(s) 88, 235
PspN4I GGNNCC 2 cut(s) 6, 837
PspPI GGNCC 3 cut(s) 233, 275, 342
PsuI RGATCY 2 cut(s) 205, 883
PsyI GACNNNGTC 1 cut(s) 743
PvuII CAGCTG 1 cut(s) 443
RsaI GTAC 5 cut(s) 419, 512, 907, 1050, 1346
RsaNI GTAC 5 cut(s) 418, 511, 906, 1049, 1345
RseI CAYNNNNRTG 3 cut(s) 137, 300, 337
SapI GCTCTTC 1 cut(s) 789
SaqAI TTAA 5 cut(s) 464, 558, 590, 759, 795
SatI GCNGC 3 cut(s) 444, 717, 1011
Sau3AI GATC 7 cut(s) 205, 289, 883, 1156, 1197, 1288, 1398
Sau96I GGNCC 3 cut(s) 233, 275, 342
ScaI AGTACT 1 cut(s) 907
SchI GAGTC 5 cut(s) 76, 191, 518, 590, 938
ScrFI CCNGG 4 cut(s) 90, 237, 247, 956
SfaNI GCATC 4 cut(s) 63, 361, 863, 1043
SfcI CTRYAG 1 cut(s) 979
SfuI TTCGAA 1 cut(s) 1024
SinI GGWCC 2 cut(s) 275, 342
SmiMI CAYNNNNRTG 3 cut(s) 137, 300, 337
SmlI CTYRAG 2 cut(s) 463, 557
SmoI CTYRAG 2 cut(s) 463, 557
Sse9I AATT 9 cut(s) 198, 270, 321, 727, 792, 828, 944, 1042, 1257
SseBI AGGCCT 1 cut(s) 1064
SsiI CCGC 1 cut(s) 137
SspI AATATT 1 cut(s) 1193
SspMI CTAG 3 cut(s) 569, 1016, 1402
StuI AGGCCT 1 cut(s) 1064
StyD4I CCNGG 4 cut(s) 88, 235, 245, 954
StyI CCWWGG 5 cut(s) 345, 610, 1059, 1065, 1175
TaaI ACNGT 7 cut(s) 510, 1003, 1036, 1151, 1239, 1253, 1315
TaiI ACGT 2 cut(s) 1311, 1393
TaqI TCGA 4 cut(s) 180, 895, 1024, 1135
TasI AATT 9 cut(s) 198, 270, 321, 727, 792, 828, 944, 1042, 1257
TatI WGTACW 3 cut(s) 510, 905, 1344
TfiI GAWTC 3 cut(s) 328, 641, 666
Tru1I TTAA 5 cut(s) 464, 558, 590, 759, 795
Tru9I TTAA 5 cut(s) 464, 558, 590, 759, 795
TscAI CASTG 3 cut(s) 739, 1156, 1339
TseFI GTSAC 4 cut(s) 521, 687, 1309, 1328
TseI GCWGC 3 cut(s) 443, 716, 1010
Tsp45I GTSAC 4 cut(s) 521, 687, 1309, 1328
TspRI CASTG 3 cut(s) 739, 1156, 1339
Tth111I GACNNNGTC 1 cut(s) 743
Vha464I CTTAAG 2 cut(s) 463, 557
VpaK11BI GGWCC 2 cut(s) 275, 342
XapI RAATTY 1 cut(s) 828
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 3 cut(s) 569, 1016, 1402
ZrmI AGTACT 1 cut(s) 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.