MD15G1067200.v1.1

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000102
Physical Location & Seq
Forward (+)
4664730 .. 4668708
3979 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1067200.v1.1.491

Sequence Viewer

Length: 1452 bp
ATGTCACGTCGCATGGCAGGACTTTCTTCTCCTTGCCGTGGTCTGCAGCTGGTTCTACTTCTGCTTCTACTCCTACCTCTTTCAAATGTTTGCTCACAGATGCTTCCAGTCTCTAACTCACAGTTGGTTAAATTTCTTCCTGGATTCCAGGGACCTCTTCCTTTCGAACTCGAAACCGGGTACGTGGGAGTGGGGGAAGAAGAGGAGGTGCAGCTATTTTACTACTTTGTCAAGACAGAAAGGAAACCTGAAGAGGCTCCTCTAATGCTTTGGCTAACTGGTGGTCCTGGTTGCTCTTCCCTCACTGCCCTTTTGTATGAAATAGGTCCATTAAATTTTAACATTGAGCAGTACAATGGGAGTTTGCCTACATTAACCTTAAATCCATACGCATGGACAAAGGTATCTAGCATAATTTTTGTAGATTCCCCGGTGGGGACTGGATTTTCCTATGCAAGAAGTTCGTTTGCTTCTCCGCCAAGTGATTCGGAACAAGTTGGGCATGCCCTCCAATTCTTAAGGAAGTGGCTTGTTGATCATCCAGAGTTCATGTCCAATCCTTTCTTTGTCGGTGGCGATTCATATTCCGGCATTCCTGTTCCTGTTCTTGCTCAGTTAATCTCAGATGGCAATCAAGAAGGAGTTAGACCCGCCATAAATCTGCAGGGTTATATACTAGGGAACCCAGTAACAGTGCCACAAGATGAAGGCAACTCACAAATCACATTTGCTCATGGGATGGGACTTATTCCTGATGACCTATTTGAGTCCTTGGAAAGAAGTTGCGGAGGAGAATATCAAACCATAGACCCCAGAAACGCAGAGTGTTTGAAACATAAGCAGGCTTATCATACTTGCATTTCACAAATAAATTTGGCGCATATTTTGGAATGGAACTGCGAACTTGTTTCTCCGAAACCTCCGCTACATATGCTTGATAAAAGAAGATATCTGAGTAACAAGGACTACAATGTGTTCTCAGAATCAACTCCTCCTCCTATATTAGACTGTCGGAGTTACGGATATTTGCTTTCTGAATATTGGACGAATGATCAGTACGTACGTGAAGCCCTTCACATACGGAAGGGAAGTATAGGGAGATGGAAGAGATGCAGCTACGATATACCTTACGAGTATGACATTCACACCAGCATTCAGTTTCATGCAAAGTTTAGTGCTCGAGGCTGTTATCGCTCTTTAATATACAGCGGAGACCATGATATGATAGTGCCCTTCATGGCTACACAAGCATGGATTAGATCTTTAAATTATTCCATTGTTAATGACTGGAGACCATGGTTTGTCAAAGGCCAAGTCGCGGGGTATACGAGGACTTATTCAAACAGGATGACCTATGCTACCGTGAAGGGGGCGGGGCACACAGCTCCTGAGTACAAGCCTGAAGAATGTTCAACTATGTATACGAAGTGGTTATACGAGGAACCTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016740 GO:0016746 GO:0016747 GO:0019748
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

484

Amino Acids

54.64

Weight (kDa)

5.78

Isoelectric Point (pI)

56.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 47 - 478 2.1e-130 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1325, 1421
AccII CGCG 1 cut(s) 1319
AciI CCGC 7 cut(s) 476, 651, 786, 923, 1209, 1319, 1373
AcsI RAATTY 3 cut(s) 131, 334, 871
AcuI CTGAAG 2 cut(s) 270, 1422
AfaI GTAC 5 cut(s) 182, 353, 1058, 1062, 1394
AfiI CCNNNNNNNGG 4 cut(s) 38, 435, 1318, 1368
AflII CTTAAG 1 cut(s) 517
AgsI TTSAA 4 cut(s) 84, 832, 1341, 1413
AjiI CACGTC 1 cut(s) 8
AjnI CCWGG 3 cut(s) 139, 147, 286
AluBI AGCT 4 cut(s) 49, 214, 1116, 1385
AluI AGCT 4 cut(s) 49, 214, 1116, 1385
Alw21I GWGCWC 1 cut(s) 1180
Alw26I GTCTC 3 cut(s) 115, 1206, 1285
AlwNI CAGNNNCTG 1 cut(s) 1388
Ama87I CYCGRG 1 cut(s) 1179
AoxI GGCC 1 cut(s) 1309
ApeKI GCWGC 3 cut(s) 46, 211, 1113
ApoI RAATTY 3 cut(s) 131, 334, 871
ArsI GACNNNNNNTTYG 2 cut(s) 1299, 1331
Asp700I GAANNNNTTC 1 cut(s) 1071
AspLEI GCGC 1 cut(s) 880
AspS9I GGNCC 3 cut(s) 152, 284, 326
AsuC2I CCSGG 2 cut(s) 178, 431
AsuII TTCGAA 1 cut(s) 165
AvaI CYCGRG 1 cut(s) 1179
AvaII GGWCC 3 cut(s) 152, 284, 326
BaeGI GKGCMC 2 cut(s) 1233, 1380
BaeI ACNNNNGTAYC 2 cut(s) 387, 420
BarI GAAGNNNNNNTAC 2 cut(s) 1418, 1450
Bbv12I GWGCWC 1 cut(s) 1180
BbvI GCAGC 3 cut(s) 58, 223, 1125
BccI CCATC 3 cut(s) 620, 733, 1095
BceAI ACGGC 1 cut(s) 21
BcgI CGANNNNNNTGC 2 cut(s) 444, 478
BciT130I CCWGG 3 cut(s) 141, 149, 288
BclI TGATCA 2 cut(s) 535, 1051
BcnI CCSGG 2 cut(s) 178, 431
BcoDI GTCTC 3 cut(s) 115, 1206, 1285
BfaI CTAG 2 cut(s) 408, 677
BfmI CTRYAG 2 cut(s) 44, 662
BfrI CTTAAG 1 cut(s) 517
BglII AGATCT 1 cut(s) 1259
BisI GCNGC 3 cut(s) 47, 212, 1114
BlsI GCNGC 3 cut(s) 48, 213, 1115
Bme1390I CCNGG 5 cut(s) 141, 149, 178, 288, 431
Bme18I GGWCC 3 cut(s) 152, 284, 326
BmeT110I CYCGRG 1 cut(s) 1179
BmgBI CACGTC 1 cut(s) 8
BmgT120I GGNCC 3 cut(s) 152, 284, 326
BmiI GGNNCC 4 cut(s) 153, 258, 683, 1443
BmrFI CCNGG 5 cut(s) 141, 149, 178, 288, 431
BmrI ACTGGG 1 cut(s) 680
BmsI GCATC 2 cut(s) 90, 1100
BmuI ACTGGG 1 cut(s) 680
BpmI CTGGAG 1 cut(s) 1309
Bpu14I TTCGAA 1 cut(s) 165
BpuMI CCSGG 2 cut(s) 178, 431
BsaAI YACGTR 3 cut(s) 184, 1060, 1064
BsaBI GATNNNNATC 1 cut(s) 630
BsaI GGTCTC 2 cut(s) 1206, 1285
BsaJI CCNNGG 5 cut(s) 37, 148, 429, 771, 1295
BsaXI ACNNNNNCTCC 2 cut(s) 979, 1009
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 435, 1318, 1368
Bse1I ACTGG 5 cut(s) 107, 283, 445, 686, 1292
Bse8I GATNNNNATC 1 cut(s) 630
BseBI CCWGG 3 cut(s) 141, 149, 288
BseDI CCNNGG 5 cut(s) 37, 148, 429, 771, 1295
BseGI GGATG 3 cut(s) 538, 744, 1353
BseJI GATNNNNATC 1 cut(s) 630
BseLI CCNNNNNNNGG 4 cut(s) 38, 435, 1318, 1368
BseMII CTCAG 5 cut(s) 626, 636, 944, 993, 1380
BseNI ACTGG 5 cut(s) 107, 283, 445, 686, 1292
BseRI GAGGAG 5 cut(s) 218, 249, 804, 981, 984
BseSI GKGCMC 2 cut(s) 1233, 1380
BseXI GCAGC 3 cut(s) 58, 223, 1125
BsgI GTGCAG 1 cut(s) 230
Bsh1236I CGCG 1 cut(s) 1319
BshFI GGCC 1 cut(s) 1311
BsiHKAI GWGCWC 1 cut(s) 1180
BsiHKCI CYCGRG 1 cut(s) 1179
BsiSI CCGG 3 cut(s) 177, 431, 588
BsiWI CGTACG 1 cut(s) 1060
BslFI GGGAC 3 cut(s) 165, 451, 756
BslI CCNNNNNNNGG 4 cut(s) 38, 435, 1318, 1368
BsmAI GTCTC 3 cut(s) 115, 1206, 1285
BsmFI GGGAC 3 cut(s) 165, 451, 756
BsmI GAATGC 2 cut(s) 591, 1152
BsnI GGCC 1 cut(s) 1311
Bso31I GGTCTC 2 cut(s) 1206, 1285
BsoBI CYCGRG 1 cut(s) 1179
Bsp119I TTCGAA 1 cut(s) 165
Bsp1286I GDGCHC 3 cut(s) 1180, 1233, 1380
Bsp143I GATC 3 cut(s) 535, 1051, 1259
Bsp19I CCATGG 1 cut(s) 1295
BspACI CCGC 7 cut(s) 476, 651, 786, 923, 1209, 1319, 1373
BspANI GGCC 1 cut(s) 1311
BspCNI CTCAG 5 cut(s) 625, 635, 945, 992, 1381
BspFNI CGCG 1 cut(s) 1319
BspLI GGNNCC 4 cut(s) 153, 258, 683, 1443
BspMAI CTGCAG 2 cut(s) 48, 666
BspQI GCTCTTC 1 cut(s) 301
BspT104I TTCGAA 1 cut(s) 165
BspTI CTTAAG 1 cut(s) 517
BspTNI GGTCTC 2 cut(s) 1206, 1285
BsrI ACTGG 5 cut(s) 107, 283, 445, 686, 1292
BssECI CCNNGG 5 cut(s) 37, 148, 429, 771, 1295
BssMI GATC 3 cut(s) 535, 1051, 1259
BssNAI GTATAC 2 cut(s) 1326, 1422
BssT1I CCWWGG 2 cut(s) 771, 1295
Bst1107I GTATAC 2 cut(s) 1326, 1422
Bst2UI CCWGG 3 cut(s) 141, 149, 288
Bst4CI ACNGT 4 cut(s) 123, 694, 1010, 1363
Bst6I CTCTTC 5 cut(s) 162, 195, 246, 301, 1100
BstAFI CTTAAG 1 cut(s) 517
BstBAI YACGTR 3 cut(s) 184, 1060, 1064
BstBI TTCGAA 1 cut(s) 165
BstC8I GCNNGC 2 cut(s) 504, 843
BstDEI CTNAG 5 cut(s) 612, 622, 953, 979, 1389
BstDSI CCRYGG 2 cut(s) 37, 1295
BstF5I GGATG 3 cut(s) 538, 744, 1353
BstFNI CGCG 1 cut(s) 1319
BstHHI GCGC 1 cut(s) 880
BstKTI GATC 3 cut(s) 538, 1054, 1262
BstMAI GTCTC 3 cut(s) 115, 1206, 1285
BstMBI GATC 3 cut(s) 535, 1051, 1259
BstMWI GCNNNNNNNGC 3 cut(s) 931, 1191, 1247
BstNI CCWGG 3 cut(s) 141, 149, 288
BstNSI RCATGY 1 cut(s) 506
BstSCI CCNGG 5 cut(s) 139, 147, 176, 286, 429
BstSFI CTRYAG 2 cut(s) 44, 662
BstSLI GKGCMC 2 cut(s) 1233, 1380
BstSNI TACGTA 1 cut(s) 1060
BstUI CGCG 1 cut(s) 1319
BstV1I GCAGC 3 cut(s) 58, 223, 1125
BstX2I RGATCY 1 cut(s) 1259
BstXI CCANNNNNNTGG 1 cut(s) 393
BstYI RGATCY 1 cut(s) 1259
BstZ17I GTATAC 2 cut(s) 1326, 1422
BsuRI GGCC 1 cut(s) 1311
BtgI CCRYGG 2 cut(s) 37, 1295
BtrI CACGTC 1 cut(s) 8
BtsCI GGATG 3 cut(s) 538, 744, 1353
BtsI GCAGTG 1 cut(s) 303
BtsIMutI CAGTG 2 cut(s) 303, 699
Cac8I GCNNGC 2 cut(s) 504, 843
CaiI CAGNNNCTG 1 cut(s) 1388
CfoI GCGC 1 cut(s) 880
Cfr13I GGNCC 3 cut(s) 152, 284, 326
Csp6I GTAC 5 cut(s) 181, 352, 1057, 1061, 1393
CviQI GTAC 5 cut(s) 181, 352, 1057, 1061, 1393
DdeI CTNAG 5 cut(s) 612, 622, 953, 979, 1389
DpnI GATC 3 cut(s) 537, 1053, 1261
DpnII GATC 3 cut(s) 535, 1051, 1259
DraI TTTAAA 1 cut(s) 1266
Eam1104I CTCTTC 5 cut(s) 162, 195, 246, 301, 1100
EarI CTCTTC 5 cut(s) 162, 195, 246, 301, 1100
EciI GGCGGA 1 cut(s) 465
Eco105I TACGTA 1 cut(s) 1060
Eco130I CCWWGG 2 cut(s) 771, 1295
Eco31I GGTCTC 2 cut(s) 1206, 1285
Eco32I GATATC 1 cut(s) 950
Eco47I GGWCC 3 cut(s) 152, 284, 326
Eco57I CTGAAG 2 cut(s) 270, 1422
Eco88I CYCGRG 1 cut(s) 1179
EcoO109I RGGNCCY 1 cut(s) 152
EcoRII CCWGG 3 cut(s) 139, 147, 286
EcoRV GATATC 1 cut(s) 950
EcoT14I CCWWGG 2 cut(s) 771, 1295
ErhI CCWWGG 2 cut(s) 771, 1295
FaqI GGGAC 3 cut(s) 165, 451, 756
FauI CCCGC 3 cut(s) 658, 1312, 1366
FauNDI CATATG 1 cut(s) 930
FbaI TGATCA 2 cut(s) 535, 1051
FblI GTMKAC 2 cut(s) 1325, 1421
Fnu4HI GCNGC 3 cut(s) 47, 212, 1114
FokI GGATG 3 cut(s) 525, 751, 1360
Fsp4HI GCNGC 3 cut(s) 47, 212, 1114
FspBI CTAG 2 cut(s) 408, 677
GlaI GCGC 1 cut(s) 879
GluI GCNGC 3 cut(s) 47, 212, 1114
GsuI CTGGAG 1 cut(s) 1309
HaeIII GGCC 1 cut(s) 1311
HapII CCGG 3 cut(s) 177, 431, 588
HhaI GCGC 1 cut(s) 880
Hin6I GCGC 1 cut(s) 878
HinP1I GCGC 1 cut(s) 878
HinfI GANTC 6 cut(s) 144, 425, 485, 578, 767, 983
HpaII CCGG 3 cut(s) 177, 431, 588
Hpy166II GTNNAC 2 cut(s) 1326, 1422
Hpy188I TCNGA 7 cut(s) 490, 625, 915, 954, 982, 1014, 1036
Hpy188III TCNNGA 5 cut(s) 232, 542, 635, 752, 1388
Hpy8I GTNNAC 2 cut(s) 1326, 1422
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 6 cut(s) 632, 701, 1078, 1082, 1243, 1360
HpyCH4III ACNGT 4 cut(s) 123, 694, 1010, 1363
HpyCH4IV ACGT 4 cut(s) 7, 183, 1059, 1063
HpyCH4V TGCA 7 cut(s) 46, 211, 455, 664, 858, 1113, 1166
HpyF10VI GCNNNNNNNGC 3 cut(s) 931, 1191, 1247
HpyF3I CTNAG 5 cut(s) 612, 622, 953, 979, 1389
HpySE526I ACGT 4 cut(s) 7, 183, 1059, 1063
HspAI GCGC 1 cut(s) 878
Ksp22I TGATCA 2 cut(s) 535, 1051
Kzo9I GATC 3 cut(s) 535, 1051, 1259
LguI GCTCTTC 1 cut(s) 301
LmnI GCTCC 2 cut(s) 262, 1390
Lsp1109I GCAGC 3 cut(s) 58, 223, 1125
LweI GCATC 2 cut(s) 90, 1100
MaeI CTAG 2 cut(s) 408, 677
MaeII ACGT 4 cut(s) 7, 183, 1059, 1063
MaeIII GTNAC 4 cut(s) 3, 688, 956, 1016
MalI GATC 3 cut(s) 537, 1053, 1261
MboI GATC 3 cut(s) 535, 1051, 1259
MflI RGATCY 1 cut(s) 1259
MhlI GDGCHC 3 cut(s) 1180, 1233, 1380
MluCI AATT 6 cut(s) 131, 334, 414, 512, 871, 1267
MlyI GAGTC 1 cut(s) 776
MmeI TCCRAC 1 cut(s) 992
MroXI GAANNNNTTC 1 cut(s) 1071
MslI CAYNNNNRTG 2 cut(s) 391, 1249
MspA1I CMGCKG 2 cut(s) 49, 1209
MspCI CTTAAG 1 cut(s) 517
MspI CCGG 3 cut(s) 177, 431, 588
MspR9I CCNGG 5 cut(s) 141, 149, 178, 288, 431
Mva1269I GAATGC 2 cut(s) 591, 1152
MvaI CCWGG 3 cut(s) 141, 149, 288
MvnI CGCG 1 cut(s) 1319
MwoI GCNNNNNNNGC 3 cut(s) 931, 1191, 1247
NciI CCSGG 2 cut(s) 178, 431
NcoI CCATGG 1 cut(s) 1295
NdeI CATATG 1 cut(s) 930
NdeII GATC 3 cut(s) 535, 1051, 1259
NlaIV GGNNCC 4 cut(s) 153, 258, 683, 1443
NmuCI GTSAC 1 cut(s) 3
NspI RCATGY 1 cut(s) 506
NspV TTCGAA 1 cut(s) 165
PaeI GCATGC 1 cut(s) 506
PaeR7I CTCGAG 1 cut(s) 1179
PciSI GCTCTTC 1 cut(s) 301
PctI GAATGC 2 cut(s) 591, 1152
PdmI GAANNNNTTC 1 cut(s) 1071
PfeI GAWTC 5 cut(s) 144, 425, 485, 578, 983
Pfl23II CGTACG 1 cut(s) 1060
PfoI TCCNGGA 1 cut(s) 139
PkrI GCNGC 3 cut(s) 48, 213, 1115
PleI GAGTC 1 cut(s) 775
PpsI GAGTC 1 cut(s) 775
Ppu21I YACGTR 3 cut(s) 184, 1060, 1064
PpuMI RGGWCCY 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 152
Psp6I CCWGG 3 cut(s) 139, 147, 286
PspGI CCWGG 3 cut(s) 139, 147, 286
PspLI CGTACG 1 cut(s) 1060
PspN4I GGNNCC 4 cut(s) 153, 258, 683, 1443
PspPI GGNCC 3 cut(s) 152, 284, 326
PspPPI RGGWCCY 1 cut(s) 152
PspXI VCTCGAGB 1 cut(s) 1179
PstI CTGCAG 2 cut(s) 48, 666
PstNI CAGNNNCTG 1 cut(s) 1388
PsuI RGATCY 1 cut(s) 1259
PvuII CAGCTG 1 cut(s) 49
RsaI GTAC 5 cut(s) 182, 353, 1058, 1062, 1394
RsaNI GTAC 5 cut(s) 181, 352, 1057, 1061, 1393
RseI CAYNNNNRTG 2 cut(s) 391, 1249
SapI GCTCTTC 1 cut(s) 301
SatI GCNGC 3 cut(s) 47, 212, 1114
Sau3AI GATC 3 cut(s) 535, 1051, 1259
Sau96I GGNCC 3 cut(s) 152, 284, 326
SchI GAGTC 1 cut(s) 776
ScrFI CCNGG 5 cut(s) 141, 149, 178, 288, 431
SduI GDGCHC 3 cut(s) 1180, 1233, 1380
SfaNI GCATC 2 cut(s) 90, 1100
SfcI CTRYAG 2 cut(s) 44, 662
Sfr274I CTCGAG 1 cut(s) 1179
SfuI TTCGAA 1 cut(s) 165
SinI GGWCC 3 cut(s) 152, 284, 326
SlaI CTCGAG 1 cut(s) 1179
SmiMI CAYNNNNRTG 2 cut(s) 391, 1249
SmlI CTYRAG 2 cut(s) 517, 1179
SmoI CTYRAG 2 cut(s) 517, 1179
SnaBI TACGTA 1 cut(s) 1060
SphI GCATGC 1 cut(s) 506
Sse9I AATT 6 cut(s) 131, 334, 414, 512, 871, 1267
SsiI CCGC 7 cut(s) 476, 651, 786, 923, 1209, 1319, 1373
SspI AATATT 1 cut(s) 1040
SspMI CTAG 2 cut(s) 408, 677
StyD4I CCNGG 5 cut(s) 139, 147, 176, 286, 429
StyI CCWWGG 2 cut(s) 771, 1295
TaaI ACNGT 4 cut(s) 123, 694, 1010, 1363
TaiI ACGT 4 cut(s) 10, 186, 1062, 1066
TaqI TCGA 3 cut(s) 165, 171, 1180
TasI AATT 6 cut(s) 131, 334, 414, 512, 871, 1267
TatI WGTACW 2 cut(s) 351, 1392
TfiI GAWTC 5 cut(s) 144, 425, 485, 578, 983
TscAI CASTG 2 cut(s) 310, 699
TseFI GTSAC 1 cut(s) 3
TseI GCWGC 3 cut(s) 46, 211, 1113
Tsp45I GTSAC 1 cut(s) 3
TspDTI ATGAA 6 cut(s) 333, 538, 570, 720, 1151, 1225
TspGWI ACGGA 2 cut(s) 1035, 1096
TspRI CASTG 2 cut(s) 310, 699
Vha464I CTTAAG 1 cut(s) 517
VpaK11BI GGWCC 3 cut(s) 152, 284, 326
XapI RAATTY 3 cut(s) 131, 334, 871
XceI RCATGY 1 cut(s) 506
XhoI CTCGAG 1 cut(s) 1179
XmiI GTMKAC 2 cut(s) 1325, 1421
XmnI GAANNNNTTC 1 cut(s) 1071
XspI CTAG 2 cut(s) 408, 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.