MD05G1103100.v1.1

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000102
Physical Location & Seq
Reverse (-)
21369467 .. 21381080
11614 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1103100.v1.1.491

Sequence Viewer

Length: 1404 bp
ATGTTGCCACAAGCACTTCTTCTGGTGGTTCTTTTGAACACCAATGTTGCTTCAACGTCAAATATCATCACCGCCCTACCCGGCTTTCCCGGTAGCGTCCCCTTCAAACTTGAAACTGGGTACGTGGGAGTAGGCGACATGGATGATGTGCAGCTATTTTATTACTTCATTGAGTCTGAAGGGAGTCCAGAATATGACCCTCTTGTGCTTTGGCTCACTGGAGGTCCTGGTTGTTCTGCGTTTTCTGCACTCGTATATGAAATAGGTCCGCTATCCTTTGACTATGTAGATTCCATTGGCAACAAGCCAAAGTTAAAGTTGAATCCATACTCATGGACAAAGGTTGCCAACATAATATTTGTAGATGCACCTGTCGGCACCGGATTCTCATACGCAAAAACTTGGAGAGGATACGCTAATATGAGTGACACTTTATCAGCAGCACAAACGTATGAATTTCTAAGAAAGTGGCTTATGGACCACCCTAAGTTCTTCAACAATCCACTCTATATTGCTGGCGATTCTTACTCGGGGGTTGTTATTCCTCTTATCGTTCAAGAAATATCCGATGGTAATCTGGATGACAATATGCCGCCAATGAATGTCAAAGGATATGTGCTTGGCAATCCAGCGACAGATCCGAAAAAAGATGAAAATTCCAGAATTTTATTTGCTTACCTAAAAGCACTTATATCAGATGAACTATACCAGTCACTTGAAACAAATTGCAACGGAGATTATGTCAATGTGGATCCATACAACGCATTATGTGTGGTTGATCTTGAAATTTACAACGAGTGCACGGAAGACATACGCTCTGTACAGATATTGGAACCTTCATGTACTGTAACTTCGCCAAAATCAATGGGATCAATATGGAATCCCGACCATCTCAGTGATAGGGACTCTAAAAATATCCTCCTTACTTCTTCTGGACTTCCTAGGCCATGGTGTCGGGAATACAATTATATCTTCTCTGAAATTTGGGCAAATGACAAAACTGTTCAAGATGCTCTTCATGTTCAGGAGGGAAGCATTGAAGAATGGATGAGATGCAATAAAAGCTTAGAAGATTCAAATATAAATGATGTTTCCTCTAGTCTTGTATATCATGAGAACCTCATAAAACAAGGCTATAGAGTTCTTATTTACAGTGGTGATCATGATATGGTAGTTCCATATGTGGGTACTCTTGCTTGGATAGAGTCGCTTAACTTGACTGTTGACAGTCGTTGGAGGCCATGGTTCGTCAGTGGGCAGATTGCAGGTGTGCAGTACTCACACATAACTAATTACAAGTTGACATTCACGACTATAAAGGGAGCCGGTCACACAGCTCCAGAGTACAAACCTGAAGAGTGTCTTGCTATGATTAATAGGTGGTTTGCATATTACCCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

468

Amino Acids

52.49

Weight (kDa)

4.63

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 27 - 462 4.5e-128 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1256
Acc36I ACCTGC 1 cut(s) 1256
AccB1I GGYRCC 1 cut(s) 377
AciI CCGC 3 cut(s) 72, 269, 593
AclWI GGATC 4 cut(s) 632, 746, 759, 877
AcsI RAATTY 5 cut(s) 455, 655, 663, 786, 981
AcuI CTGAAG 2 cut(s) 198, 1374
AfaI GTAC 6 cut(s) 122, 822, 844, 1189, 1277, 1346
AfiI CCNNNNNNNGG 1 cut(s) 1184
AjnI CCWGG 1 cut(s) 226
AluBI AGCT 3 cut(s) 154, 1065, 1337
AluI AGCT 3 cut(s) 154, 1065, 1337
Alw21I GWGCWC 1 cut(s) 803
Alw44I GTGCAC 1 cut(s) 799
AlwI GGATC 4 cut(s) 632, 746, 759, 877
Ama87I CYCGRG 1 cut(s) 529
AoxI GGCC 2 cut(s) 944, 1238
ApaLI GTGCAC 1 cut(s) 799
ApeKI GCWGC 2 cut(s) 151, 440
ApoI RAATTY 5 cut(s) 455, 655, 663, 786, 981
AseI ATTAAT 1 cut(s) 1374
AspA2I CCTAGG 1 cut(s) 941
AspS9I GGNCC 3 cut(s) 224, 266, 478
AsuC2I CCSGG 2 cut(s) 81, 90
AsuHPI GGTGA 2 cut(s) 61, 1169
AvaI CYCGRG 1 cut(s) 529
AvaII GGWCC 3 cut(s) 224, 266, 478
AvrII CCTAGG 1 cut(s) 941
BaeGI GKGCMC 1 cut(s) 803
BamHI GGATCC 1 cut(s) 751
BanI GGYRCC 1 cut(s) 377
BarI GAAGNNNNNNTAC 2 cut(s) 835, 867
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 803
BbvI GCAGC 2 cut(s) 163, 452
BccI CCATC 2 cut(s) 563, 897
BciT130I CCWGG 1 cut(s) 228
BciVI GTATCC 1 cut(s) 404
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 2 cut(s) 81, 90
BfaI CTAG 2 cut(s) 942, 1098
BfmI CTRYAG 1 cut(s) 1135
BfuAI ACCTGC 1 cut(s) 1256
BfuI GTATCC 1 cut(s) 404
BisI GCNGC 3 cut(s) 152, 441, 593
BlnI CCTAGG 1 cut(s) 941
BlsI GCNGC 3 cut(s) 153, 442, 594
BmcAI AGTACT 1 cut(s) 1277
Bme1390I CCNGG 3 cut(s) 81, 90, 228
Bme18I GGWCC 3 cut(s) 224, 266, 478
BmeT110I CYCGRG 1 cut(s) 529
BmgT120I GGNCC 3 cut(s) 224, 266, 478
BmiI GGNNCC 4 cut(s) 379, 753, 834, 1324
BmrFI CCNGG 3 cut(s) 81, 90, 228
BmrI ACTGGG 1 cut(s) 126
BmsI GCATC 3 cut(s) 355, 1000, 1043
BmuI ACTGGG 1 cut(s) 126
BpiI GAAGAC 1 cut(s) 813
BpmI CTGGAG 2 cut(s) 240, 1323
BpuMI CCSGG 2 cut(s) 81, 90
BsaAI YACGTR 1 cut(s) 124
BsaBI GATNNNNATC 1 cut(s) 573
BsaJI CCNNGG 3 cut(s) 941, 947, 1241
BsaWI WCCGGW 1 cut(s) 380
BsaXI ACNNNNNCTCC 2 cut(s) 726, 756
Bsc4I CCNNNNNNNGG 1 cut(s) 1184
Bse118I RCCGGY 1 cut(s) 1325
Bse1I ACTGG 3 cut(s) 121, 223, 709
Bse8I GATNNNNATC 1 cut(s) 573
BseBI CCWGG 1 cut(s) 228
BseDI CCNNGG 3 cut(s) 941, 947, 1241
BseGI GGATG 3 cut(s) 148, 586, 1053
BseJI GATNNNNATC 1 cut(s) 573
BseLI CCNNNNNNNGG 1 cut(s) 1184
BseMII CTCAG 1 cut(s) 907
BseNI ACTGG 3 cut(s) 121, 223, 709
BseSI GKGCMC 1 cut(s) 803
BseXI GCAGC 2 cut(s) 163, 452
BsgI GTGCAG 3 cut(s) 170, 231, 1292
BshFI GGCC 2 cut(s) 946, 1240
BshNI GGYRCC 1 cut(s) 377
BsiHKAI GWGCWC 1 cut(s) 803
BsiHKCI CYCGRG 1 cut(s) 529
BsiSI CCGG 4 cut(s) 81, 90, 381, 1326
BslFI GGGAC 2 cut(s) 83, 917
BslI CCNNNNNNNGG 1 cut(s) 1184
BsmFI GGGAC 2 cut(s) 83, 917
BsnI GGCC 2 cut(s) 946, 1240
BsoBI CYCGRG 1 cut(s) 529
Bsp1286I GDGCHC 1 cut(s) 803
Bsp1407I TGTACA 1 cut(s) 820
Bsp143I GATC 5 cut(s) 637, 751, 778, 869, 1159
Bsp19I CCATGG 2 cut(s) 947, 1241
BspACI CCGC 3 cut(s) 72, 269, 593
BspANI GGCC 2 cut(s) 946, 1240
BspCNI CTCAG 1 cut(s) 906
BspHI TCATGA 2 cut(s) 1111, 1162
BspLI GGNNCC 4 cut(s) 379, 753, 834, 1324
BspMI ACCTGC 1 cut(s) 1256
BspPI GGATC 4 cut(s) 632, 746, 759, 877
BspQI GCTCTTC 1 cut(s) 1020
BspT107I GGYRCC 1 cut(s) 377
BsrFI RCCGGY 1 cut(s) 1325
BsrGI TGTACA 1 cut(s) 820
BsrI ACTGG 3 cut(s) 121, 223, 709
BssAI RCCGGY 1 cut(s) 1325
BssECI CCNNGG 3 cut(s) 941, 947, 1241
BssMI GATC 5 cut(s) 637, 751, 778, 869, 1159
BssT1I CCWWGG 3 cut(s) 941, 947, 1241
Bst2UI CCWGG 1 cut(s) 228
Bst4CI ACNGT 5 cut(s) 847, 1003, 1154, 1222, 1229
Bst6I CTCTTC 2 cut(s) 1020, 1350
BstAUI TGTACA 1 cut(s) 820
BstBAI YACGTR 1 cut(s) 124
BstC8I GCNNGC 1 cut(s) 517
BstDEI CTNAG 4 cut(s) 461, 486, 893, 1066
BstDSI CCRYGG 2 cut(s) 947, 1241
BstF5I GGATG 3 cut(s) 148, 586, 1053
BstKTI GATC 5 cut(s) 640, 754, 781, 872, 1162
BstMBI GATC 5 cut(s) 637, 751, 778, 869, 1159
BstMWI GCNNNNNNNGC 2 cut(s) 245, 1062
BstNI CCWGG 1 cut(s) 228
BstSCI CCNGG 3 cut(s) 79, 88, 226
BstSFI CTRYAG 1 cut(s) 1135
BstSLI GKGCMC 1 cut(s) 803
BstV1I GCAGC 2 cut(s) 163, 452
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 2 cut(s) 637, 751
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 2 cut(s) 637, 751
BsuI GTATCC 1 cut(s) 404
BsuRI GGCC 2 cut(s) 946, 1240
BtgI CCRYGG 2 cut(s) 947, 1241
BtsCI GGATG 3 cut(s) 148, 586, 1053
BtsIMutI CAGTG 4 cut(s) 216, 901, 1159, 1258
BveI ACCTGC 1 cut(s) 1256
Cac8I GCNNGC 1 cut(s) 517
CciI TCATGA 2 cut(s) 1111, 1162
Cfr10I RCCGGY 1 cut(s) 1325
Cfr13I GGNCC 3 cut(s) 224, 266, 478
CseI GACGC 1 cut(s) 85
Csp6I GTAC 6 cut(s) 121, 821, 843, 1188, 1276, 1345
CviAII CATG 8 cut(s) 139, 333, 840, 948, 1019, 1112, 1163, 1242
CviQI GTAC 6 cut(s) 121, 821, 843, 1188, 1276, 1345
DdeI CTNAG 4 cut(s) 461, 486, 893, 1066
DpnI GATC 5 cut(s) 639, 753, 780, 871, 1161
DpnII GATC 5 cut(s) 637, 751, 778, 869, 1159
Eam1104I CTCTTC 2 cut(s) 1020, 1350
EarI CTCTTC 2 cut(s) 1020, 1350
Eco130I CCWWGG 3 cut(s) 941, 947, 1241
Eco47I GGWCC 3 cut(s) 224, 266, 478
Eco57I CTGAAG 2 cut(s) 198, 1374
Eco88I CYCGRG 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 224
EcoRII CCWGG 1 cut(s) 226
EcoT14I CCWWGG 3 cut(s) 941, 947, 1241
ErhI CCWWGG 3 cut(s) 941, 947, 1241
FaeI CATG 8 cut(s) 142, 336, 843, 951, 1022, 1115, 1166, 1245
FalI AAGNNNNNCTT 5 cut(s) 35, 999, 1031, 1347, 1379
FaqI GGGAC 2 cut(s) 83, 917
FatI CATG 8 cut(s) 138, 332, 839, 947, 1018, 1111, 1162, 1241
FauNDI CATATG 1 cut(s) 1180
FbaI TGATCA 1 cut(s) 1159
Fnu4HI GCNGC 3 cut(s) 152, 441, 593
FokI GGATG 3 cut(s) 155, 593, 1060
Fsp4HI GCNGC 3 cut(s) 152, 441, 593
FspBI CTAG 2 cut(s) 942, 1098
GluI GCNGC 3 cut(s) 152, 441, 593
GsuI CTGGAG 2 cut(s) 240, 1323
HaeIII GGCC 2 cut(s) 946, 1240
HapII CCGG 4 cut(s) 81, 90, 381, 1326
HgaI GACGC 1 cut(s) 85
Hin1II CATG 8 cut(s) 142, 336, 843, 951, 1022, 1115, 1166, 1245
HincII GTYRAC 2 cut(s) 1225, 1302
HindII GTYRAC 2 cut(s) 1225, 1302
HindIII AAGCTT 1 cut(s) 1063
HpaII CCGG 4 cut(s) 81, 90, 381, 1326
HphI GGTGA 2 cut(s) 61, 1169
Hpy166II GTNNAC 3 cut(s) 801, 1225, 1302
Hpy188I TCNGA 5 cut(s) 178, 568, 642, 697, 979
Hpy8I GTNNAC 3 cut(s) 801, 1225, 1302
HpyAV CCTTC 3 cut(s) 112, 173, 846
HpyCH4III ACNGT 5 cut(s) 847, 1003, 1154, 1222, 1229
HpyCH4IV ACGT 3 cut(s) 56, 123, 449
HpyCH4V TGCA 9 cut(s) 151, 248, 368, 729, 801, 1056, 1265, 1273, 1388
HpyF10VI GCNNNNNNNGC 2 cut(s) 245, 1062
HpyF3I CTNAG 4 cut(s) 461, 486, 893, 1066
HpySE526I ACGT 3 cut(s) 56, 123, 449
Hsp92II CATG 8 cut(s) 142, 336, 843, 951, 1022, 1115, 1166, 1245
Ksp22I TGATCA 1 cut(s) 1159
Kzo9I GATC 5 cut(s) 637, 751, 778, 869, 1159
LguI GCTCTTC 1 cut(s) 1020
LmnI GCTCC 2 cut(s) 1322, 1342
Lsp1109I GCAGC 2 cut(s) 163, 452
LweI GCATC 3 cut(s) 355, 1000, 1043
MaeI CTAG 2 cut(s) 942, 1098
MaeII ACGT 3 cut(s) 56, 123, 449
MaeIII GTNAC 4 cut(s) 425, 711, 847, 1328
MalI GATC 5 cut(s) 639, 753, 780, 871, 1161
MboI GATC 5 cut(s) 637, 751, 778, 869, 1159
MboII GAAGA 9 cut(s) 11, 484, 818, 921, 964, 1007, 1052, 1082, 1367
MflI RGATCY 2 cut(s) 637, 751
MhlI GDGCHC 1 cut(s) 803
MluCI AATT 8 cut(s) 455, 655, 663, 724, 786, 964, 981, 1291
MlyI GAGTC 4 cut(s) 182, 193, 899, 1214
MmeI TCCRAC 1 cut(s) 1214
MnlI CCTC 9 cut(s) 210, 215, 401, 555, 929, 1021, 1105, 1130, 1230
MseI TTAA 3 cut(s) 314, 1212, 1374
MslI CAYNNNNRTG 2 cut(s) 331, 894
MspI CCGG 4 cut(s) 81, 90, 381, 1326
MspR9I CCNGG 3 cut(s) 81, 90, 228
MvaI CCWGG 1 cut(s) 228
MwoI GCNNNNNNNGC 2 cut(s) 245, 1062
NciI CCSGG 2 cut(s) 81, 90
NcoI CCATGG 2 cut(s) 947, 1241
NdeI CATATG 1 cut(s) 1180
NdeII GATC 5 cut(s) 637, 751, 778, 869, 1159
NlaIII CATG 8 cut(s) 142, 336, 843, 951, 1022, 1115, 1166, 1245
NlaIV GGNNCC 4 cut(s) 379, 753, 834, 1324
NmuCI GTSAC 3 cut(s) 425, 711, 1328
PagI TCATGA 2 cut(s) 1111, 1162
PaqCI CACCTGC 1 cut(s) 1256
PciSI GCTCTTC 1 cut(s) 1020
PfeI GAWTC 6 cut(s) 290, 322, 384, 521, 880, 1073
PkrI GCNGC 3 cut(s) 153, 442, 594
PleI GAGTC 4 cut(s) 181, 192, 899, 1213
PpsI GAGTC 4 cut(s) 181, 192, 899, 1213
Ppu21I YACGTR 1 cut(s) 124
PpuMI RGGWCCY 1 cut(s) 224
PshBI ATTAAT 1 cut(s) 1374
Psp5II RGGWCCY 1 cut(s) 224
Psp6I CCWGG 1 cut(s) 226
PspGI CCWGG 1 cut(s) 226
PspN4I GGNNCC 4 cut(s) 379, 753, 834, 1324
PspPI GGNCC 3 cut(s) 224, 266, 478
PspPPI RGGWCCY 1 cut(s) 224
PsuI RGATCY 2 cut(s) 637, 751
RsaI GTAC 6 cut(s) 122, 822, 844, 1189, 1277, 1346
RsaNI GTAC 6 cut(s) 121, 821, 843, 1188, 1276, 1345
RseI CAYNNNNRTG 2 cut(s) 331, 894
SapI GCTCTTC 1 cut(s) 1020
SaqAI TTAA 3 cut(s) 314, 1212, 1374
SatI GCNGC 3 cut(s) 152, 441, 593
Sau3AI GATC 5 cut(s) 637, 751, 778, 869, 1159
Sau96I GGNCC 3 cut(s) 224, 266, 478
ScaI AGTACT 1 cut(s) 1277
SchI GAGTC 4 cut(s) 182, 193, 899, 1214
ScrFI CCNGG 3 cut(s) 81, 90, 228
SduI GDGCHC 1 cut(s) 803
SfaNI GCATC 3 cut(s) 355, 1000, 1043
SfcI CTRYAG 1 cut(s) 1135
SinI GGWCC 3 cut(s) 224, 266, 478
SmiMI CAYNNNNRTG 2 cut(s) 331, 894
Sse9I AATT 8 cut(s) 455, 655, 663, 724, 786, 964, 981, 1291
SsiI CCGC 3 cut(s) 72, 269, 593
SspI AATATT 1 cut(s) 357
SspMI CTAG 2 cut(s) 942, 1098
StyD4I CCNGG 3 cut(s) 79, 88, 226
StyI CCWWGG 3 cut(s) 941, 947, 1241
TaaI ACNGT 5 cut(s) 847, 1003, 1154, 1222, 1229
TaiI ACGT 3 cut(s) 59, 126, 452
TasI AATT 8 cut(s) 455, 655, 663, 724, 786, 964, 981, 1291
TatI WGTACW 4 cut(s) 820, 842, 1275, 1344
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 6 cut(s) 290, 322, 384, 521, 880, 1073
Tru1I TTAA 3 cut(s) 314, 1212, 1374
Tru9I TTAA 3 cut(s) 314, 1212, 1374
TscAI CASTG 4 cut(s) 223, 901, 1159, 1258
TseFI GTSAC 3 cut(s) 425, 711, 1328
TseI GCWGC 2 cut(s) 151, 440
Tsp45I GTSAC 3 cut(s) 425, 711, 1328
TspDTI ATGAA 8 cut(s) 157, 273, 468, 614, 666, 714, 828, 1007
TspGWI ACGGA 2 cut(s) 747, 818
TspRI CASTG 4 cut(s) 223, 901, 1159, 1258
VneI GTGCAC 1 cut(s) 799
VpaK11BI GGWCC 3 cut(s) 224, 266, 478
VspI ATTAAT 1 cut(s) 1374
XapI RAATTY 5 cut(s) 455, 655, 663, 786, 981
XmaJI CCTAGG 1 cut(s) 941
XspI CTAG 2 cut(s) 942, 1098
ZrmI AGTACT 1 cut(s) 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.