Rmu_sc0006782.1_g000011

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006782.1
Physical Location & Seq
Reverse (-)
38810 .. 41674
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006782.1_g000011.1.cds

Sequence Viewer

Length: 636 bp
atgactgtgttgctacaagcacttcttctagtcctcctctttcacattaatgctgcttccaggtccatcatcaccagcttacccggctttcccggtgaccttccattcaaacttgaaactggatacatcggagttggagattcggataacgtgcaactattctattacttcattgagtcccaaggatctccgatgtatgatcctcttgtgctttggctcaccggaggtcctggttgttctggtttttctgcccttgtatatgaaaatattggtcctctgtcatttgactatgcacactcgtttgacaacaagccacggctgaagttgaacccttactcatggacaaaggttgccaacataatatttatagatgcccctgtcgggacaggattctcatatgctaaaaattgggacgaatatcccaatttgaatgacacaatatcagctgcacaaacatatcagtttcttagaaagtggcttgcggatcaccccaggttcatctccaatccactttacattattggagattcttattcaggcatagttcttccgatcatcgttcaaaaaatatctgatggtaatgaagatggacttgagccagcaatgaatctccaagtatatgttcttccgttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

211

Amino Acids

23.49

Weight (kDa)

4.63

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 482
AclWI GGATC 3 cut(s) 193, 194, 492
AcuI CTGAAG 1 cut(s) 341
AfiI CCNNNNNNNGG 1 cut(s) 381
AgsI TTSAA 5 cut(s) 109, 116, 328, 430, 563
AjnI CCWGG 3 cut(s) 59, 229, 491
AjuI GAANNNNNNNTTGG 1 cut(s) 606
AluBI AGCT 2 cut(s) 78, 446
AluI AGCT 2 cut(s) 78, 446
AlwI GGATC 3 cut(s) 193, 194, 492
ApeKI GCWGC 2 cut(s) 53, 446
AseI ATTAAT 1 cut(s) 48
AspS9I GGNCC 3 cut(s) 63, 227, 272
AsuC2I CCSGG 2 cut(s) 84, 93
AsuHPI GGTGA 4 cut(s) 64, 107, 211, 479
AvaII GGWCC 3 cut(s) 63, 227, 272
BarI GAAGNNNNNNTAC 1 cut(s) 609
BbvI GCAGC 2 cut(s) 40, 433
BccI CCATC 3 cut(s) 74, 569, 581
BceAI ACGGC 1 cut(s) 332
BciT130I CCWGG 3 cut(s) 61, 231, 493
BciVI GTATCC 1 cut(s) 116
BcnI CCSGG 2 cut(s) 84, 93
BfaI CTAG 1 cut(s) 29
BfuI GTATCC 1 cut(s) 116
BisI GCNGC 2 cut(s) 54, 447
BlsI GCNGC 2 cut(s) 55, 448
Bme1390I CCNGG 5 cut(s) 61, 84, 93, 231, 493
Bme18I GGWCC 3 cut(s) 63, 227, 272
BmgT120I GGNCC 3 cut(s) 63, 227, 272
BmrFI CCNGG 5 cut(s) 61, 84, 93, 231, 493
BmsI GCATC 1 cut(s) 361
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 2 cut(s) 84, 93
BsaJI CCNNGG 3 cut(s) 181, 314, 491
BsaWI WCCGGW 1 cut(s) 221
Bsc4I CCNNNNNNNGG 1 cut(s) 381
Bse1I ACTGG 1 cut(s) 124
Bse3DI GCAATG 1 cut(s) 609
BseBI CCWGG 3 cut(s) 61, 231, 493
BseDI CCNNGG 3 cut(s) 181, 314, 491
BseLI CCNNNNNNNGG 1 cut(s) 381
BseMI GCAATG 1 cut(s) 609
BseNI ACTGG 1 cut(s) 124
BseRI GAGGAG 1 cut(s) 26
BseXI GCAGC 2 cut(s) 40, 433
BsgI GTGCAG 1 cut(s) 432
BsiSI CCGG 3 cut(s) 84, 93, 222
BslFI GGGAC 3 cut(s) 163, 397, 425
BslI CCNNNNNNNGG 1 cut(s) 381
BsmFI GGGAC 3 cut(s) 163, 397, 425
Bsp143I GATC 4 cut(s) 185, 199, 484, 552
BspACI CCGC 1 cut(s) 482
BspPI GGATC 3 cut(s) 193, 194, 492
BsrDI GCAATG 1 cut(s) 609
BsrI ACTGG 1 cut(s) 124
BssECI CCNNGG 3 cut(s) 181, 314, 491
BssMI GATC 4 cut(s) 185, 199, 484, 552
BssT1I CCWWGG 1 cut(s) 181
Bst2UI CCWGG 3 cut(s) 61, 231, 493
Bst4CI ACNGT 1 cut(s) 7
BstC8I GCNNGC 2 cut(s) 480, 600
BstDEI CTNAG 1 cut(s) 467
BstDSI CCRYGG 1 cut(s) 314
BstEII GGTNACC 1 cut(s) 95
BstKTI GATC 4 cut(s) 188, 202, 487, 555
BstMBI GATC 4 cut(s) 185, 199, 484, 552
BstMWI GCNNNNNNNGC 1 cut(s) 84
BstNI CCWGG 3 cut(s) 61, 231, 493
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 5 cut(s) 59, 82, 91, 229, 491
BstV1I GCAGC 2 cut(s) 40, 433
BstX2I RGATCY 1 cut(s) 185
BstYI RGATCY 1 cut(s) 185
BsuI GTATCC 1 cut(s) 116
BtgI CCRYGG 1 cut(s) 314
Cac8I GCNNGC 2 cut(s) 480, 600
Cfr13I GGNCC 3 cut(s) 63, 227, 272
CviAII CATG 1 cut(s) 339
CviJI RGCY 8 cut(s) 78, 87, 217, 313, 319, 446, 478, 598
CviKI_1 RGCY 8 cut(s) 78, 87, 217, 313, 319, 446, 478, 598
DdeI CTNAG 1 cut(s) 467
DpnI GATC 4 cut(s) 187, 201, 486, 554
DpnII GATC 4 cut(s) 185, 199, 484, 552
Eco130I CCWWGG 1 cut(s) 181
Eco47I GGWCC 3 cut(s) 63, 227, 272
Eco57I CTGAAG 1 cut(s) 341
Eco91I GGTNACC 1 cut(s) 95
EcoO109I RGGNCCY 1 cut(s) 227
EcoO65I GGTNACC 1 cut(s) 95
EcoRII CCWGG 3 cut(s) 59, 229, 491
EcoT14I CCWWGG 1 cut(s) 181
ErhI CCWWGG 1 cut(s) 181
FaeI CATG 1 cut(s) 342
FalI AAGNNNNNCTT 4 cut(s) 9, 41, 576, 608
FaqI GGGAC 3 cut(s) 163, 397, 425
FatI CATG 1 cut(s) 338
FauNDI CATATG 1 cut(s) 397
Fnu4HI GCNGC 2 cut(s) 54, 447
Fsp4HI GCNGC 2 cut(s) 54, 447
FspBI CTAG 1 cut(s) 29
GluI GCNGC 2 cut(s) 54, 447
HapII CCGG 3 cut(s) 84, 93, 222
Hin1II CATG 1 cut(s) 342
HinfI GANTC 5 cut(s) 140, 176, 390, 527, 607
HpaII CCGG 3 cut(s) 84, 93, 222
HphI GGTGA 4 cut(s) 64, 107, 211, 479
Hpy188I TCNGA 5 cut(s) 131, 145, 192, 552, 574
Hpy188III TCNNGA 1 cut(s) 382
HpyAV CCTTC 1 cut(s) 110
HpyCH4III ACNGT 1 cut(s) 7
HpyCH4IV ACGT 1 cut(s) 150
HpyCH4V TGCA 3 cut(s) 154, 293, 449
HpyF10VI GCNNNNNNNGC 1 cut(s) 84
HpyF3I CTNAG 1 cut(s) 467
HpySE526I ACGT 1 cut(s) 150
Hsp92II CATG 1 cut(s) 342
Kzo9I GATC 4 cut(s) 185, 199, 484, 552
Lsp1109I GCAGC 2 cut(s) 40, 433
LweI GCATC 1 cut(s) 361
MaeI CTAG 1 cut(s) 29
MaeII ACGT 1 cut(s) 150
MaeIII GTNAC 1 cut(s) 95
MalI GATC 4 cut(s) 187, 201, 486, 554
MboI GATC 4 cut(s) 185, 199, 484, 552
MboII GAAGA 4 cut(s) 17, 539, 596, 617
MflI RGATCY 1 cut(s) 185
MluCI AATT 2 cut(s) 406, 424
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 1 cut(s) 115
MnlI CCTC 5 cut(s) 44, 47, 213, 218, 285
MseI TTAA 1 cut(s) 48
MslI CAYNNNNRTG 1 cut(s) 48
MspA1I CMGCKG 1 cut(s) 446
MspI CCGG 3 cut(s) 84, 93, 222
MspR9I CCNGG 5 cut(s) 61, 84, 93, 231, 493
MvaI CCWGG 3 cut(s) 61, 231, 493
MwoI GCNNNNNNNGC 1 cut(s) 84
NciI CCSGG 2 cut(s) 84, 93
NdeI CATATG 1 cut(s) 397
NdeII GATC 4 cut(s) 185, 199, 484, 552
NlaIII CATG 1 cut(s) 342
NmuCI GTSAC 1 cut(s) 95
PfeI GAWTC 4 cut(s) 140, 390, 527, 607
PkrI GCNGC 2 cut(s) 55, 448
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
PpuMI RGGWCCY 1 cut(s) 227
PshBI ATTAAT 1 cut(s) 48
Psp5II RGGWCCY 1 cut(s) 227
Psp6I CCWGG 3 cut(s) 59, 229, 491
PspEI GGTNACC 1 cut(s) 95
PspGI CCWGG 3 cut(s) 59, 229, 491
PspPI GGNCC 3 cut(s) 63, 227, 272
PspPPI RGGWCCY 1 cut(s) 227
PsuI RGATCY 1 cut(s) 185
PvuII CAGCTG 1 cut(s) 446
RseI CAYNNNNRTG 1 cut(s) 48
SaqAI TTAA 1 cut(s) 48
SatI GCNGC 2 cut(s) 54, 447
Sau3AI GATC 4 cut(s) 185, 199, 484, 552
Sau96I GGNCC 3 cut(s) 63, 227, 272
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 5 cut(s) 61, 84, 93, 231, 493
SetI ASST 8 cut(s) 65, 80, 102, 153, 229, 351, 448, 497
SfaNI GCATC 1 cut(s) 361
SinI GGWCC 3 cut(s) 63, 227, 272
SmiMI CAYNNNNRTG 1 cut(s) 48
SmlI CTYRAG 1 cut(s) 593
SmoI CTYRAG 1 cut(s) 593
Sse9I AATT 2 cut(s) 406, 424
SsiI CCGC 1 cut(s) 482
SspI AATATT 2 cut(s) 268, 363
SspMI CTAG 1 cut(s) 29
StyD4I CCNGG 5 cut(s) 59, 82, 91, 229, 491
StyI CCWWGG 1 cut(s) 181
TaaI ACNGT 1 cut(s) 7
TaiI ACGT 1 cut(s) 153
TasI AATT 2 cut(s) 406, 424
TfiI GAWTC 4 cut(s) 140, 390, 527, 607
Tru1I TTAA 1 cut(s) 48
Tru9I TTAA 1 cut(s) 48
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 2 cut(s) 53, 446
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 5 cut(s) 160, 276, 487, 597, 620
TspGWI ACGGA 1 cut(s) 618
VpaK11BI GGWCC 3 cut(s) 63, 227, 272
VspI ATTAAT 1 cut(s) 48
XspI CTAG 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.