Rorug05G0535900

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
72403308 .. 72408961
5654 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0535900.1

Sequence Viewer

Length: 1698 bp
ATGGATGCGGTGGCGGAAGGGCTGTGGGGGTTGGCGGACTACCAGGAGCAGAGCGGCGAGATCGGCAAAGCCGTCAAGTGCCTGGAAGCCATCTGCCAAAGCGACGTGTCGTTTTTCCCCATCGTCGAGGTCAAGACCCGTCTCCGAATCGCTACTCTTCTTCTCAAGCACTCCCACAACGTCAACCAGGCCAAGGCTCACTTGGAGCGCGCGCAGTTGCTCCTCAAATCCATTCCTTCCTGTTTTGATTTGAAGTGCAGAGCTTATAGTCTGCTCAGCCAGTGTTACCATCTCGTCGGCTCCATAGCTCCTCAGAAACAGGTCCTCCACAAGGCCCTGGAGCTCACCGCTAGCGGCTACGATATTGCAGTGAAGTTATGGTCTTGCAACTTCAATTCGCAGCTGGCAAATGCGTTGATTATTGAGGGAGACTACCAGAGTTCGATTGCGGCATTGGACGCCGGCTATGTTTGTGCTACTCAGATAGGTTATCCTGAGTTGCAGATGTTCTTTGCAACTTGTATGCTCCATGTACATCTCATGCACTGGGAGGATGAGAGTTCAGTTGAGCGAGCTGCTGCCAAATGCGATGAGGTCTGGGAGTTCCTTGACCCCCAGAAAAAACAACTATGCCTTGGCTTATTCTTCTACAATGAACTGCTGCACATATTTTATCGCCTCCGAGTATGTGACTACAAGAATGCTACACCACACATAGAAAGATTGGATGCTGCCATGAAGGCCGATTTGAAGCAAACACAGTATGTGCAACAGCTAACTAAGGAATTTGATGCCTTAAATGAGAGTCTCTCCCGCCCTGATCTACACTACAGGGAGAGGTTAGCACTGTCTGAAAAACAGTCTCGGATACAACACCAGCTGGCTTCTCTTACTGCATTGAGTTCAACTAGCAAGGGAACTTTGGAACCAGCTTATTTTGGAAATATGAGACGCACTGATGGAGATAAGCTTGAGCTAGCACCGCCTCCTATTGATGGGGAATGGCTACCAAAAAGTGCAGTCTATGCTCTTGTTGATCTTATGATGGTTGTGCTGAGCCGTCCAAAAGGAAATTTTAAGGATTGTGGAAAGCGCATTCAATCTGGAATGCATACCATTGAAGAGGAGCTTTTGAAGCTTGGAATAACTGATGGTGTGAGAGAAGTGAATTTGCAGCACTCTGCCATTTGGATGGCTGGTGTGTATTTAATGCTACTTATGCAGTTCCTTGAAAACAAAGTAGCCATGGAGTTGACACGATCTGAATTTGTAGAAGCACAAGAGGCATTGGTGCAGATGAAGAATTGGTTTATACGCTTTCCAACTATTTTACAGACATGTGAGAGCATCATTGAAATGCTCAGGGGGCAGTATGCTCATTCCGTTGGTTGTTATAGTGAGGCAGCTTTTCATTTCATTGAAGCTGTAAAGCTCACAGAGAGCAAATCAATGCAAGCGCTTTGCCAAATATATGCTGCTGTCTCCTACATATGCATTGGTGACTCTGAATCATCTACACAGGCACTTGATTTGATTGGACCAGTTTACAGAATGATGGATTCATTTGTTGGAGTTCGAGAGAAAACCAATTGCCTTTTTGCCTATGGTCTTTTATTGATGAAGCAACAAGATCTACAGGAAGCAAGTATCTGGTTGATGCAGAAACCGACTCGCCAAAGGTTTGCAAATGACACATAA

Protein Analysis

565

Amino Acids

64.02

Weight (kDa)

5.93

Isoelectric Point (pI)

46.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cohesin_load PF10345 22 - 507 3.4e-26 Cohesin loading factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 54
AccII CGCG 2 cut(s) 210, 212
AciI CCGC 9 cut(s) 8, 14, 35, 54, 348, 354, 449, 814, 983
AcsI RAATTY 4 cut(s) 785, 1072, 1168, 1265
AcyI GRCGYC 1 cut(s) 459
AfaI GTAC 1 cut(s) 534
AfeI AGCGCT 1 cut(s) 1458
AfiI CCNNNNNNNGG 3 cut(s) 193, 331, 995
AflIII ACRYGT 2 cut(s) 105, 1337
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 4 cut(s) 42, 81, 186, 336
Alw21I GWGCWC 1 cut(s) 345
Alw26I GTCTC 6 cut(s) 146, 423, 812, 867, 943, 1486
Aor51HI AGCGCT 1 cut(s) 1458
AoxI GGCC 3 cut(s) 189, 333, 741
ApeKI GCWGC 8 cut(s) 400, 575, 578, 661, 731, 1174, 1403, 1475
ApoI RAATTY 4 cut(s) 785, 1072, 1168, 1265
AspLEI GCGC 5 cut(s) 210, 212, 214, 1095, 1459
AspS9I GGNCC 3 cut(s) 322, 334, 1538
AsuHPI GGTGA 2 cut(s) 337, 1511
AsuNHI GCTAGC 2 cut(s) 350, 976
AvaII GGWCC 2 cut(s) 322, 1538
BanII GRGCYC 1 cut(s) 345
Bbv12I GWGCWC 1 cut(s) 345
BbvI GCAGC 8 cut(s) 412, 562, 565, 648, 718, 1186, 1415, 1462
BccI CCATC 9 cut(s) 98, 128, 297, 953, 989, 1039, 1145, 1186, 1549
BceAI ACGGC 2 cut(s) 56, 1044
BciT130I CCWGG 4 cut(s) 44, 83, 188, 338
BciVI GTATCC 1 cut(s) 861
BcoDI GTCTC 6 cut(s) 146, 423, 812, 867, 943, 1486
BfaI CTAG 3 cut(s) 351, 909, 977
BfmI CTRYAG 2 cut(s) 829, 1634
BfoI RGCGCY 1 cut(s) 1460
BfuI GTATCC 1 cut(s) 861
BglI GCCNNNNNGGC 1 cut(s) 740
BglII AGATCT 1 cut(s) 1630
BlpI GCTNAGC 2 cut(s) 275, 1055
Bme1390I CCNGG 4 cut(s) 44, 83, 188, 338
Bme18I GGWCC 2 cut(s) 322, 1538
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 3 cut(s) 322, 334, 1538
BmiI GGNNCC 2 cut(s) 301, 927
BmrFI CCNGG 4 cut(s) 44, 83, 188, 338
BmrI ACTGGG 1 cut(s) 556
BmsI GCATC 4 cut(s) 718, 781, 1356, 1647
BmtI GCTAGC 2 cut(s) 354, 980
BmuI ACTGGG 1 cut(s) 556
BplI GAGNNNNNCTC 2 cut(s) 794, 826
BpmI CTGGAG 1 cut(s) 359
Bpu10I CCTNAGC 1 cut(s) 1361
Bpu1102I GCTNAGC 2 cut(s) 275, 1055
BpuEI CTTGAG 2 cut(s) 149, 992
BsaHI GRCGYC 1 cut(s) 459
BsaJI CCNNGG 4 cut(s) 192, 336, 634, 1245
BsaXI ACNNNNNCTCC 2 cut(s) 309, 339
Bsc4I CCNNNNNNNGG 3 cut(s) 193, 331, 995
Bse118I RCCGGY 1 cut(s) 461
Bse1I ACTGG 3 cut(s) 280, 551, 1541
BseBI CCWGG 4 cut(s) 44, 83, 188, 338
BseDI CCNNGG 4 cut(s) 192, 336, 634, 1245
BseGI GGATG 4 cut(s) 10, 559, 733, 1197
BseLI CCNNNNNNNGG 3 cut(s) 193, 331, 995
BseMII CTCAG 6 cut(s) 289, 326, 486, 494, 1046, 1375
BseNI ACTGG 3 cut(s) 280, 551, 1541
BsePI GCGCGC 2 cut(s) 208, 210
BseRI GAGGAG 3 cut(s) 212, 300, 1139
BseXI GCAGC 8 cut(s) 412, 562, 565, 648, 718, 1186, 1415, 1462
BsgI GTGCAG 4 cut(s) 277, 647, 1038, 1313
Bsh1236I CGCG 2 cut(s) 210, 212
BshFI GGCC 3 cut(s) 191, 335, 743
BsiHKAI GWGCWC 1 cut(s) 345
BsiSI CCGG 1 cut(s) 462
BslI CCNNNNNNNGG 3 cut(s) 193, 331, 995
BsmAI GTCTC 6 cut(s) 146, 423, 812, 867, 943, 1486
BsmBI CGTCTC 2 cut(s) 146, 943
BsmI GAATGC 3 cut(s) 706, 1095, 1113
BsnI GGCC 3 cut(s) 191, 335, 743
Bsp1286I GDGCHC 1 cut(s) 345
Bsp1407I TGTACA 1 cut(s) 532
Bsp143I GATC 5 cut(s) 60, 820, 1036, 1259, 1630
Bsp1720I GCTNAGC 2 cut(s) 275, 1055
Bsp19I CCATGG 1 cut(s) 1245
BspACI CCGC 9 cut(s) 8, 14, 35, 54, 348, 354, 449, 814, 983
BspANI GGCC 3 cut(s) 191, 335, 743
BspCNI CTCAG 6 cut(s) 288, 325, 487, 493, 1047, 1374
BspFNI CGCG 2 cut(s) 210, 212
BspLI GGNNCC 2 cut(s) 301, 927
BspOI GCTAGC 2 cut(s) 354, 980
BsrBI CCGCTC 1 cut(s) 54
BsrFI RCCGGY 1 cut(s) 461
BsrGI TGTACA 1 cut(s) 532
BsrI ACTGG 3 cut(s) 280, 551, 1541
BssAI RCCGGY 1 cut(s) 461
BssECI CCNNGG 4 cut(s) 192, 336, 634, 1245
BssHII GCGCGC 2 cut(s) 208, 210
BssMI GATC 5 cut(s) 60, 820, 1036, 1259, 1630
BssNI GRCGYC 1 cut(s) 459
BssT1I CCWWGG 3 cut(s) 192, 634, 1245
Bst2UI CCWGG 4 cut(s) 44, 83, 188, 338
Bst4CI ACNGT 3 cut(s) 762, 849, 861
Bst6I CTCTTC 2 cut(s) 162, 1116
BstACI GRCGYC 1 cut(s) 459
BstAPI GCANNNNNTGC 1 cut(s) 1025
BstAUI TGTACA 1 cut(s) 532
BstC8I GCNNGC 9 cut(s) 210, 212, 352, 405, 463, 573, 882, 978, 1455
BstDEI CTNAG 7 cut(s) 275, 312, 480, 495, 780, 1055, 1361
BstDSI CCRYGG 1 cut(s) 1245
BstENI CCTNNNNNAGG 1 cut(s) 329
BstF5I GGATG 4 cut(s) 10, 559, 733, 1197
BstFNI CGCG 2 cut(s) 210, 212
BstH2I RGCGCY 1 cut(s) 1460
BstHHI GCGC 5 cut(s) 210, 212, 214, 1095, 1459
BstKTI GATC 5 cut(s) 63, 823, 1039, 1262, 1633
BstMAI GTCTC 6 cut(s) 146, 423, 812, 867, 943, 1486
BstMBI GATC 5 cut(s) 60, 820, 1036, 1259, 1630
BstMWI GCNNNNNNNGC 9 cut(s) 63, 458, 740, 982, 1025, 1135, 1219, 1283, 1366
BstNI CCWGG 4 cut(s) 44, 83, 188, 338
BstNSI RCATGY 1 cut(s) 1341
BstSCI CCNGG 4 cut(s) 42, 81, 186, 336
BstSFI CTRYAG 2 cut(s) 829, 1634
BstUI CGCG 2 cut(s) 210, 212
BstV1I GCAGC 8 cut(s) 412, 562, 565, 648, 718, 1186, 1415, 1462
BstX2I RGATCY 1 cut(s) 1630
BstXI CCANNNNNNTGG 1 cut(s) 1192
BstYI RGATCY 1 cut(s) 1630
BsuI GTATCC 1 cut(s) 861
BsuRI GGCC 3 cut(s) 191, 335, 743
BtgI CCRYGG 1 cut(s) 1245
BtgZI GCGATG 1 cut(s) 603
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 4 cut(s) 10, 559, 733, 1197
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 5 cut(s) 287, 375, 544, 845, 954
Cac8I GCNNGC 9 cut(s) 210, 212, 352, 405, 463, 573, 882, 978, 1455
CfoI GCGC 5 cut(s) 210, 212, 214, 1095, 1459
Cfr10I RCCGGY 1 cut(s) 461
Cfr13I GGNCC 3 cut(s) 322, 334, 1538
CseI GACGC 2 cut(s) 467, 960
Csp6I GTAC 1 cut(s) 533
CviAII CATG 5 cut(s) 530, 541, 736, 1246, 1338
CviQI GTAC 1 cut(s) 533
DdeI CTNAG 7 cut(s) 275, 312, 480, 495, 780, 1055, 1361
DpnI GATC 5 cut(s) 62, 822, 1038, 1261, 1632
DpnII GATC 5 cut(s) 60, 820, 1036, 1259, 1630
Eam1104I CTCTTC 2 cut(s) 162, 1116
EarI CTCTTC 2 cut(s) 162, 1116
EciI GGCGGA 2 cut(s) 29, 50
Ecl136II GAGCTC 1 cut(s) 343
Eco130I CCWWGG 3 cut(s) 192, 634, 1245
Eco24I GRGCYC 1 cut(s) 345
Eco47I GGWCC 2 cut(s) 322, 1538
Eco47III AGCGCT 1 cut(s) 1458
Eco53kI GAGCTC 1 cut(s) 343
EcoICRI GAGCTC 1 cut(s) 343
EcoNI CCTNNNNNAGG 1 cut(s) 329
EcoO109I RGGNCCY 2 cut(s) 322, 334
EcoRII CCWGG 4 cut(s) 42, 81, 186, 336
EcoT14I CCWWGG 3 cut(s) 192, 634, 1245
EcoT22I ATGCAT 2 cut(s) 1113, 1496
EcoT38I GRGCYC 1 cut(s) 345
ErhI CCWWGG 3 cut(s) 192, 634, 1245
Esp3I CGTCTC 2 cut(s) 146, 943
FaeI CATG 5 cut(s) 533, 544, 739, 1249, 1341
FalI AAGNNNNNCTT 4 cut(s) 185, 217, 1113, 1145
FatI CATG 5 cut(s) 529, 540, 735, 1245, 1337
FauI CCCGC 1 cut(s) 821
FauNDI CATATG 1 cut(s) 1490
FokI GGATG 4 cut(s) 17, 566, 740, 1204
FriOI GRGCYC 1 cut(s) 345
FspBI CTAG 3 cut(s) 351, 909, 977
GlaI GCGC 5 cut(s) 209, 211, 213, 1094, 1458
GsuI CTGGAG 1 cut(s) 359
HaeII RGCGCY 1 cut(s) 1460
HaeIII GGCC 3 cut(s) 191, 335, 743
HapII CCGG 1 cut(s) 462
HgaI GACGC 2 cut(s) 467, 960
HhaI GCGC 5 cut(s) 210, 212, 214, 1095, 1459
Hin1I GRCGYC 1 cut(s) 459
Hin1II CATG 5 cut(s) 533, 544, 739, 1249, 1341
Hin6I GCGC 5 cut(s) 208, 210, 212, 1093, 1457
HinP1I GCGC 5 cut(s) 208, 210, 212, 1093, 1457
HincII GTYRAC 2 cut(s) 184, 1254
HindII GTYRAC 2 cut(s) 184, 1254
HindIII AAGCTT 2 cut(s) 968, 1136
HinfI GANTC 6 cut(s) 147, 805, 1502, 1508, 1559, 1669
HpaII CCGG 1 cut(s) 462
HphI GGTGA 2 cut(s) 337, 1511
Hpy166II GTNNAC 3 cut(s) 184, 1254, 1546
Hpy188I TCNGA 8 cut(s) 146, 315, 483, 683, 853, 867, 1264, 1507
Hpy188III TCNNGA 4 cut(s) 133, 494, 1104, 1577
Hpy8I GTNNAC 3 cut(s) 184, 1254, 1546
Hpy99I CGWCG 3 cut(s) 107, 128, 299
HpyAV CCTTC 3 cut(s) 11, 246, 733
HpyCH4III ACNGT 3 cut(s) 762, 849, 861
HpyCH4IV ACGT 2 cut(s) 105, 180
HpyF10VI GCNNNNNNNGC 9 cut(s) 63, 458, 740, 982, 1025, 1135, 1219, 1283, 1366
HpyF3I CTNAG 7 cut(s) 275, 312, 480, 495, 780, 1055, 1361
HpySE526I ACGT 2 cut(s) 105, 180
Hsp92I GRCGYC 1 cut(s) 459
Hsp92II CATG 5 cut(s) 533, 544, 739, 1249, 1341
HspAI GCGC 5 cut(s) 208, 210, 212, 1093, 1457
KroI GCCGGC 1 cut(s) 461
KroNI GCCGGC 1 cut(s) 463
Kzo9I GATC 5 cut(s) 60, 820, 1036, 1259, 1630
LmnI GCTCC 8 cut(s) 46, 205, 225, 305, 313, 340, 531, 1126
Lsp1109I GCAGC 8 cut(s) 412, 562, 565, 648, 718, 1186, 1415, 1462
LweI GCATC 4 cut(s) 718, 781, 1356, 1647
MaeI CTAG 3 cut(s) 351, 909, 977
MaeII ACGT 2 cut(s) 105, 180
MaeIII GTNAC 3 cut(s) 284, 689, 1499
MalI GATC 5 cut(s) 62, 822, 1038, 1261, 1632
MbiI CCGCTC 1 cut(s) 54
MboI GATC 5 cut(s) 60, 820, 1036, 1259, 1630
MboII GAAGA 5 cut(s) 149, 152, 637, 1133, 1312
MfeI CAATTG 1 cut(s) 1588
MflI RGATCY 1 cut(s) 1630
MhlI GDGCHC 1 cut(s) 345
MluCI AATT 7 cut(s) 394, 785, 1072, 1168, 1265, 1303, 1588
MlyI GAGTC 3 cut(s) 814, 1496, 1663
MmeI TCCRAC 2 cut(s) 1346, 1549
Mph1103I ATGCAT 2 cut(s) 1113, 1496
MroNI GCCGGC 1 cut(s) 461
MseI TTAA 3 cut(s) 797, 1077, 1208
MslI CAYNNNNRTG 2 cut(s) 1190, 1355
MspA1I CMGCKG 2 cut(s) 403, 880
MspI CCGG 1 cut(s) 462
MspR9I CCNGG 4 cut(s) 44, 83, 188, 338
MunI CAATTG 1 cut(s) 1588
Mva1269I GAATGC 3 cut(s) 706, 1095, 1113
MvaI CCWGG 4 cut(s) 44, 83, 188, 338
MvnI CGCG 2 cut(s) 210, 212
MwoI GCNNNNNNNGC 9 cut(s) 63, 458, 740, 982, 1025, 1135, 1219, 1283, 1366
NaeI GCCGGC 1 cut(s) 463
NcoI CCATGG 1 cut(s) 1245
NdeI CATATG 1 cut(s) 1490
NdeII GATC 5 cut(s) 60, 820, 1036, 1259, 1630
NgoMIV GCCGGC 1 cut(s) 461
NheI GCTAGC 2 cut(s) 350, 976
NlaIII CATG 5 cut(s) 533, 544, 739, 1249, 1341
NlaIV GGNNCC 2 cut(s) 301, 927
NmuCI GTSAC 2 cut(s) 689, 1499
NsiI ATGCAT 2 cut(s) 1113, 1496
NspI RCATGY 1 cut(s) 1341
PauI GCGCGC 2 cut(s) 208, 210
PciI ACATGT 1 cut(s) 1337
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PctI GAATGC 3 cut(s) 706, 1095, 1113
PdiI GCCGGC 1 cut(s) 463
PfeI GAWTC 3 cut(s) 147, 1508, 1559
PleI GAGTC 3 cut(s) 813, 1496, 1663
PpsI GAGTC 3 cut(s) 813, 1496, 1663
PpuMI RGGWCCY 1 cut(s) 322
PscI ACATGT 1 cut(s) 1337
Psp124BI GAGCTC 1 cut(s) 345
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 4 cut(s) 42, 81, 186, 336
PspGI CCWGG 4 cut(s) 42, 81, 186, 336
PspN4I GGNNCC 2 cut(s) 301, 927
PspPI GGNCC 3 cut(s) 322, 334, 1538
PspPPI RGGWCCY 1 cut(s) 322
PsuI RGATCY 1 cut(s) 1630
PteI GCGCGC 2 cut(s) 208, 210
PvuII CAGCTG 2 cut(s) 403, 880
RsaI GTAC 1 cut(s) 534
RsaNI GTAC 1 cut(s) 533
RseI CAYNNNNRTG 2 cut(s) 1190, 1355
SacI GAGCTC 1 cut(s) 345
SaqAI TTAA 3 cut(s) 797, 1077, 1208
Sau3AI GATC 5 cut(s) 60, 820, 1036, 1259, 1630
Sau96I GGNCC 3 cut(s) 322, 334, 1538
SchI GAGTC 3 cut(s) 814, 1496, 1663
ScrFI CCNGG 4 cut(s) 44, 83, 188, 338
SduI GDGCHC 1 cut(s) 345
SfaNI GCATC 4 cut(s) 718, 781, 1356, 1647
SfcI CTRYAG 2 cut(s) 829, 1634
SinI GGWCC 2 cut(s) 322, 1538
SmiMI CAYNNNNRTG 2 cut(s) 1190, 1355
SmlI CTYRAG 2 cut(s) 164, 971
SmoI CTYRAG 2 cut(s) 164, 971
Sse9I AATT 7 cut(s) 394, 785, 1072, 1168, 1265, 1303, 1588
SsiI CCGC 9 cut(s) 8, 14, 35, 54, 348, 354, 449, 814, 983
SspMI CTAG 3 cut(s) 351, 909, 977
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 4 cut(s) 42, 81, 186, 336
StyI CCWWGG 3 cut(s) 192, 634, 1245
TaaI ACNGT 3 cut(s) 762, 849, 861
TaiI ACGT 2 cut(s) 108, 183
TaqI TCGA 3 cut(s) 126, 443, 1576
TasI AATT 7 cut(s) 394, 785, 1072, 1168, 1265, 1303, 1588
TatI WGTACW 1 cut(s) 532
TauI GCSGC 3 cut(s) 57, 357, 452
TfiI GAWTC 3 cut(s) 147, 1508, 1559
Tru1I TTAA 3 cut(s) 797, 1077, 1208
Tru9I TTAA 3 cut(s) 797, 1077, 1208
TscAI CASTG 5 cut(s) 287, 375, 551, 852, 961
TseFI GTSAC 2 cut(s) 689, 1499
TseI GCWGC 8 cut(s) 400, 575, 578, 661, 731, 1174, 1403, 1475
Tsp45I GTSAC 2 cut(s) 689, 1499
TspDTI ATGAA 7 cut(s) 669, 752, 1313, 1400, 1405, 1551, 1634
TspGWI ACGGA 1 cut(s) 1372
TspRI CASTG 5 cut(s) 287, 375, 551, 852, 961
VpaK11BI GGWCC 2 cut(s) 322, 1538
XagI CCTNNNNNAGG 1 cut(s) 329
XapI RAATTY 4 cut(s) 785, 1072, 1168, 1265
XceI RCATGY 1 cut(s) 1341
XcmI CCANNNNNNNNNTGG 1 cut(s) 199
XspI CTAG 3 cut(s) 351, 909, 977
Zsp2I ATGCAT 2 cut(s) 1113, 1496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.