AT3G12220

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000102
Physical Location & Seq
Reverse (-)
3896207 .. 3899019
2813 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G12220.2

Sequence Viewer

Length: 1308 bp
ATGGGTTCATGGATACCCAAGTTGCTGCTGCTGCAACTTGTGCTTCTGTTGACTAAGCATGCTGATTCAAGTTCTATCATCAAATATCTTCCTGGTTTTGAAGGCCCTCTTCCCTTCGAGCTCGAAACCGGGTACATTGGTGTTGGTGAGGAAGATGAAGATCAAATGTTCTACTACTTCATCAAATCTGAGAGCAATCCAAAAACAGACCCTCTTCTTCTCTGGCTAAGTGGAGGACCTGGTTGCTCTTCTTTCACTGGTCTTATATATGAGAACGGGCCACTTGGTTTCAAGGTTGAGGCGTACAATGGAAGTATCCCCACGTTGGTCTCTACTACATATTCATGGACAAAGGTTGCGAATATAATCTATTTAGATCAACCTGTTGGGACTGGCTTCTCCTACTCAAGAAATCCACTTGCTGATATACCAAGTGACACAGGATCAGCTAAGCGGGTCGATGAGTTTCTTCGTAAATGGCTAACCAAGCATCCTGAGTATTTCTCCAACCCTTTCTATGCCGGTGGAAATTCTTATTCCGGTAAGATGGTTCCGGTCATCGTTCAAGAAATCTCAAATGGAAATTGTATTTACGGCAAACCTCAAATAAGGCTTCAGGGCTATGTGCTCGGAAGTCCGGTAACAGACTATGATCTTGATAGAAATTCTCGTATTCAATTTGCTCATGGAATGGCACTTATCTCTAATGAACTCTATGAGTCGATGAAGAGAACTTGTGGAGGAAACTATATTTTTGTAGATCCTCTTAACACAGAATGCTTGGAACTCATAAAAGACTATGACAACTGTGTTTCTGGAATATATGAAAATCTTATCCTCGTACCAAAATGTGACCTTACATCTCCTGATTGCCATTCGTATCGGTCTATGCTATCCGATTACTGGGCTAATAACGAGAGCGTACGCAGAGCACTTAAAGTTGTGGAGGGTACTACAGGTAGATGGGAACGATGTAAATGGACTTTGCAAAACAATAAAGACATTAAAAGCAGCATACCATACCATAAGAAGAACAGCATCCAAGGCTATCGATCTCTTATCTTCAGTGGTGATCACGACATGCTAACACCTTACGTTGGAACTCAAGACTGGATAAGATCTCTCAACTATTCCATTATTGACAAATGGAGGCCATGGATGATACTTGATCAAGTCGCTGGATACACTACGACTTACGCTAATAAGATGACATTTGCTACTGTGAAAGGTGGCGGGCACACGTTAGACTATAAACCAGATGAGAATTCAATCTTGTTCAAGAGGTGGATAAGTGGCCAACTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016740 GO:0016746 GO:0016747 GO:0016752 GO:0019748
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

435

Amino Acids

49.24

Weight (kDa)

6.03

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 15 - 402 3.8e-121 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 454, 1233
AclWI GGATC 2 cut(s) 451, 755
AcoI YGGCCR 1 cut(s) 1294
AcsI RAATTY 3 cut(s) 529, 664, 1264
AcuI CTGAAG 2 cut(s) 599, 1048
AfaI GTAC 5 cut(s) 134, 305, 843, 924, 952
AfiI CCNNNNNNNGG 3 cut(s) 325, 903, 1097
AflIII ACRYGT 1 cut(s) 1239
AgsI TTSAA 7 cut(s) 69, 101, 292, 566, 677, 1269, 1279
AjnI CCWGG 2 cut(s) 91, 238
AluBI AGCT 2 cut(s) 121, 449
AluI AGCT 2 cut(s) 121, 449
Alw21I GWGCWC 3 cut(s) 123, 630, 934
Alw26I GTCTC 1 cut(s) 334
AlwI GGATC 2 cut(s) 451, 755
AoxI GGCC 4 cut(s) 103, 278, 1151, 1294
ApeKI GCWGC 4 cut(s) 25, 28, 31, 1011
ApoI RAATTY 3 cut(s) 529, 664, 1264
AspS9I GGNCC 3 cut(s) 104, 236, 278
AsuC2I CCSGG 1 cut(s) 130
AsuHPI GGTGA 2 cut(s) 158, 1082
AvaII GGWCC 1 cut(s) 236
BaeGI GKGCMC 1 cut(s) 1239
BaeI ACNNNNGTAYC 3 cut(s) 38, 124, 157
BalI TGGCCA 1 cut(s) 1296
BanII GRGCYC 1 cut(s) 123
Bbv12I GWGCWC 3 cut(s) 123, 630, 934
BbvI GCAGC 4 cut(s) 12, 15, 18, 1023
BccI CCATC 2 cut(s) 541, 957
BceAI ACGGC 1 cut(s) 610
BciT130I CCWGG 2 cut(s) 93, 240
BciVI GTATCC 3 cut(s) 6, 326, 1175
BclI TGATCA 2 cut(s) 1072, 1168
BcnI CCSGG 1 cut(s) 130
BcoDI GTCTC 1 cut(s) 334
BfmI CTRYAG 1 cut(s) 954
BfuI GTATCC 3 cut(s) 6, 326, 1175
BglII AGATCT 1 cut(s) 1118
BisI GCNGC 4 cut(s) 26, 29, 32, 1012
BlpI GCTNAGC 1 cut(s) 450
BlsI GCNGC 4 cut(s) 27, 30, 33, 1013
Bme1390I CCNGG 3 cut(s) 93, 130, 240
Bme18I GGWCC 1 cut(s) 236
BmgT120I GGNCC 3 cut(s) 104, 236, 278
BmiI GGNNCC 1 cut(s) 552
BmrFI CCNGG 3 cut(s) 93, 130, 240
BmrI ACTGGG 1 cut(s) 913
BmsI GCATC 2 cut(s) 499, 1047
BmuI ACTGGG 1 cut(s) 913
BplI GAGNNNNNCTC 2 cut(s) 488, 520
Bpu1102I GCTNAGC 1 cut(s) 450
BpuEI CTTGAG 2 cut(s) 391, 1089
BpuMI CCSGG 1 cut(s) 130
Bsa29I ATCGAT 1 cut(s) 1051
BsaBI GATNNNNATC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 2 cut(s) 1042, 1154
BsaWI WCCGGW 3 cut(s) 539, 553, 637
Bsc4I CCNNNNNNNGG 3 cut(s) 325, 903, 1097
Bse118I RCCGGY 1 cut(s) 521
Bse1I ACTGG 4 cut(s) 262, 397, 908, 1115
Bse8I GATNNNNATC 1 cut(s) 159
BseBI CCWGG 2 cut(s) 93, 240
BseCI ATCGAT 1 cut(s) 1051
BseDI CCNNGG 2 cut(s) 1042, 1154
BseGI GGATG 3 cut(s) 490, 1038, 1164
BseJI GATNNNNATC 1 cut(s) 159
BseLI CCNNNNNNNGG 3 cut(s) 325, 903, 1097
BseMII CTCAG 2 cut(s) 180, 486
BseNI ACTGG 4 cut(s) 262, 397, 908, 1115
BseSI GKGCMC 1 cut(s) 1239
BseXI GCAGC 4 cut(s) 12, 15, 18, 1023
BshFI GGCC 4 cut(s) 105, 280, 1153, 1296
BshVI ATCGAT 1 cut(s) 1051
BsiHKAI GWGCWC 3 cut(s) 123, 630, 934
BsiSI CCGG 5 cut(s) 129, 522, 540, 554, 638
BsiWI CGTACG 1 cut(s) 922
BslFI GGGAC 1 cut(s) 403
BslI CCNNNNNNNGG 3 cut(s) 325, 903, 1097
BsmAI GTCTC 1 cut(s) 334
BsmFI GGGAC 1 cut(s) 403
BsmI GAATGC 1 cut(s) 782
BsnI GGCC 4 cut(s) 105, 280, 1153, 1296
Bso31I GGTCTC 1 cut(s) 334
Bsp1286I GDGCHC 4 cut(s) 123, 630, 934, 1239
Bsp143I GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
Bsp1720I GCTNAGC 1 cut(s) 450
Bsp19I CCATGG 1 cut(s) 1154
BspACI CCGC 2 cut(s) 454, 1233
BspANI GGCC 4 cut(s) 105, 280, 1153, 1296
BspCNI CTCAG 2 cut(s) 181, 487
BspDI ATCGAT 1 cut(s) 1051
BspLI GGNNCC 1 cut(s) 552
BspPI GGATC 2 cut(s) 451, 755
BspQI GCTCTTC 1 cut(s) 253
BspTNI GGTCTC 1 cut(s) 334
BsrFI RCCGGY 1 cut(s) 521
BsrI ACTGG 4 cut(s) 262, 397, 908, 1115
BssAI RCCGGY 1 cut(s) 521
BssECI CCNNGG 2 cut(s) 1042, 1154
BssMI GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
BssT1I CCWWGG 2 cut(s) 1042, 1154
Bst2UI CCWGG 2 cut(s) 93, 240
Bst4CI ACNGT 2 cut(s) 809, 1222
Bst6I CTCTTC 4 cut(s) 114, 219, 253, 722
BstAPI GCANNNNNTGC 1 cut(s) 40
BstC8I GCNNGC 2 cut(s) 60, 1235
BstDEI CTNAG 5 cut(s) 54, 189, 227, 450, 495
BstDSI CCRYGG 1 cut(s) 1154
BstF5I GGATG 3 cut(s) 490, 1038, 1164
BstKTI GATC 9 cut(s) 163, 379, 446, 655, 763, 1055, 1075, 1121, 1171
BstMAI GTCTC 1 cut(s) 334
BstMBI GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
BstMWI GCNNNNNNNGC 4 cut(s) 31, 40, 487, 1044
BstNI CCWGG 2 cut(s) 93, 240
BstNSI RCATGY 2 cut(s) 62, 1084
BstSCI CCNGG 3 cut(s) 91, 128, 238
BstSFI CTRYAG 1 cut(s) 954
BstSLI GKGCMC 1 cut(s) 1239
BstV1I GCAGC 4 cut(s) 12, 15, 18, 1023
BstX2I RGATCY 2 cut(s) 760, 1118
BstYI RGATCY 2 cut(s) 760, 1118
Bsu15I ATCGAT 1 cut(s) 1051
BsuI GTATCC 3 cut(s) 6, 326, 1175
BsuRI GGCC 4 cut(s) 105, 280, 1153, 1296
BsuTUI ATCGAT 1 cut(s) 1051
BtgI CCRYGG 1 cut(s) 1154
BtsCI GGATG 3 cut(s) 490, 1038, 1164
BtsIMutI CAGTG 2 cut(s) 255, 1072
Cac8I GCNNGC 2 cut(s) 60, 1235
Cfr10I RCCGGY 1 cut(s) 521
Cfr13I GGNCC 3 cut(s) 104, 236, 278
ClaI ATCGAT 1 cut(s) 1051
CsiI ACCWGGT 1 cut(s) 238
Csp6I GTAC 5 cut(s) 133, 304, 842, 923, 951
CviAII CATG 6 cut(s) 9, 59, 345, 686, 1081, 1155
CviQI GTAC 5 cut(s) 133, 304, 842, 923, 951
DdeI CTNAG 5 cut(s) 54, 189, 227, 450, 495
DpnI GATC 9 cut(s) 162, 378, 445, 654, 762, 1054, 1074, 1120, 1170
DpnII GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
EaeI YGGCCR 1 cut(s) 1294
Eam1104I CTCTTC 4 cut(s) 114, 219, 253, 722
EarI CTCTTC 4 cut(s) 114, 219, 253, 722
Ecl136II GAGCTC 1 cut(s) 121
Eco130I CCWWGG 2 cut(s) 1042, 1154
Eco24I GRGCYC 1 cut(s) 123
Eco31I GGTCTC 1 cut(s) 334
Eco47I GGWCC 1 cut(s) 236
Eco53kI GAGCTC 1 cut(s) 121
Eco57I CTGAAG 2 cut(s) 599, 1048
EcoICRI GAGCTC 1 cut(s) 121
EcoO109I RGGNCCY 2 cut(s) 104, 236
EcoRI GAATTC 1 cut(s) 1264
EcoRII CCWGG 2 cut(s) 91, 238
EcoT14I CCWWGG 2 cut(s) 1042, 1154
EcoT38I GRGCYC 1 cut(s) 123
ErhI CCWWGG 2 cut(s) 1042, 1154
FaeI CATG 6 cut(s) 12, 62, 348, 689, 1084, 1158
FalI AAGNNNNNCTT 2 cut(s) 93, 125
FaqI GGGAC 1 cut(s) 403
FatI CATG 6 cut(s) 8, 58, 344, 685, 1080, 1154
FauI CCCGC 2 cut(s) 447, 1226
FbaI TGATCA 2 cut(s) 1072, 1168
Fnu4HI GCNGC 4 cut(s) 26, 29, 32, 1012
FokI GGATG 3 cut(s) 477, 1025, 1171
FriOI GRGCYC 1 cut(s) 123
Fsp4HI GCNGC 4 cut(s) 26, 29, 32, 1012
GluI GCNGC 4 cut(s) 26, 29, 32, 1012
HaeIII GGCC 4 cut(s) 105, 280, 1153, 1296
HapII CCGG 5 cut(s) 129, 522, 540, 554, 638
Hin1II CATG 6 cut(s) 12, 62, 348, 689, 1084, 1158
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HinfI GANTC 2 cut(s) 65, 719
HpaII CCGG 5 cut(s) 129, 522, 540, 554, 638
HphI GGTGA 2 cut(s) 158, 1082
Hpy166II GTNNAC 1 cut(s) 51
Hpy188I TCNGA 3 cut(s) 190, 632, 898
Hpy188III TCNNGA 9 cut(s) 408, 494, 566, 656, 816, 866, 1076, 1106, 1279
Hpy8I GTNNAC 1 cut(s) 51
HpyAV CCTTC 2 cut(s) 95, 124
HpyCH4III ACNGT 2 cut(s) 809, 1222
HpyCH4IV ACGT 3 cut(s) 323, 1095, 1241
HpyCH4V TGCA 2 cut(s) 34, 988
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 40, 487, 1044
HpyF3I CTNAG 5 cut(s) 54, 189, 227, 450, 495
HpySE526I ACGT 3 cut(s) 323, 1095, 1241
Hsp92II CATG 6 cut(s) 12, 62, 348, 689, 1084, 1158
Ksp22I TGATCA 2 cut(s) 1072, 1168
Kzo9I GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
LguI GCTCTTC 1 cut(s) 253
Lsp1109I GCAGC 4 cut(s) 12, 15, 18, 1023
LweI GCATC 2 cut(s) 499, 1047
MabI ACCWGGT 1 cut(s) 238
MaeII ACGT 3 cut(s) 323, 1095, 1241
MaeIII GTNAC 3 cut(s) 434, 640, 851
MalI GATC 9 cut(s) 162, 378, 445, 654, 762, 1054, 1074, 1120, 1170
MboI GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
MflI RGATCY 2 cut(s) 760, 1118
MhlI GDGCHC 4 cut(s) 123, 630, 934, 1239
MlsI TGGCCA 1 cut(s) 1296
MluCI AATT 5 cut(s) 529, 583, 664, 677, 1264
MluNI TGGCCA 1 cut(s) 1296
MlyI GAGTC 1 cut(s) 728
MmeI TCCRAC 2 cut(s) 531, 1078
Mox20I TGGCCA 1 cut(s) 1296
MscI TGGCCA 1 cut(s) 1296
MseI TTAA 4 cut(s) 768, 936, 1005, 1306
MslI CAYNNNNRTG 1 cut(s) 343
Msp20I TGGCCA 1 cut(s) 1296
MspI CCGG 5 cut(s) 129, 522, 540, 554, 638
MspR9I CCNGG 3 cut(s) 93, 130, 240
Mva1269I GAATGC 1 cut(s) 782
MvaI CCWGG 2 cut(s) 93, 240
MwoI GCNNNNNNNGC 4 cut(s) 31, 40, 487, 1044
NciI CCSGG 1 cut(s) 130
NcoI CCATGG 1 cut(s) 1154
NdeII GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
NlaIII CATG 6 cut(s) 12, 62, 348, 689, 1084, 1158
NlaIV GGNNCC 1 cut(s) 552
NmuCI GTSAC 2 cut(s) 434, 851
NspI RCATGY 2 cut(s) 62, 1084
PaeI GCATGC 1 cut(s) 62
PciSI GCTCTTC 1 cut(s) 253
PctI GAATGC 1 cut(s) 782
PfeI GAWTC 1 cut(s) 65
Pfl23II CGTACG 1 cut(s) 922
PkrI GCNGC 4 cut(s) 27, 30, 33, 1013
PleI GAGTC 1 cut(s) 727
PpsI GAGTC 1 cut(s) 727
PpuMI RGGWCCY 1 cut(s) 236
Psp124BI GAGCTC 1 cut(s) 123
Psp5II RGGWCCY 1 cut(s) 236
Psp6I CCWGG 2 cut(s) 91, 238
PspGI CCWGG 2 cut(s) 91, 238
PspLI CGTACG 1 cut(s) 922
PspN4I GGNNCC 1 cut(s) 552
PspPI GGNCC 3 cut(s) 104, 236, 278
PspPPI RGGWCCY 1 cut(s) 236
PsuI RGATCY 2 cut(s) 760, 1118
RsaI GTAC 5 cut(s) 134, 305, 843, 924, 952
RsaNI GTAC 5 cut(s) 133, 304, 842, 923, 951
RseI CAYNNNNRTG 1 cut(s) 343
SacI GAGCTC 1 cut(s) 123
SapI GCTCTTC 1 cut(s) 253
SaqAI TTAA 4 cut(s) 768, 936, 1005, 1306
SatI GCNGC 4 cut(s) 26, 29, 32, 1012
Sau3AI GATC 9 cut(s) 160, 376, 443, 652, 760, 1052, 1072, 1118, 1168
Sau96I GGNCC 3 cut(s) 104, 236, 278
SchI GAGTC 1 cut(s) 728
ScrFI CCNGG 3 cut(s) 93, 130, 240
SduI GDGCHC 4 cut(s) 123, 630, 934, 1239
SexAI ACCWGGT 1 cut(s) 238
SfaNI GCATC 2 cut(s) 499, 1047
SfcI CTRYAG 1 cut(s) 954
SinI GGWCC 1 cut(s) 236
SmiMI CAYNNNNRTG 1 cut(s) 343
SmlI CTYRAG 2 cut(s) 406, 1104
SmoI CTYRAG 2 cut(s) 406, 1104
SphI GCATGC 1 cut(s) 62
Sse9I AATT 5 cut(s) 529, 583, 664, 677, 1264
SsiI CCGC 2 cut(s) 454, 1233
SstI GAGCTC 1 cut(s) 123
StyD4I CCNGG 3 cut(s) 91, 128, 238
StyI CCWWGG 2 cut(s) 1042, 1154
TaaI ACNGT 2 cut(s) 809, 1222
TaiI ACGT 3 cut(s) 326, 1098, 1244
TaqI TCGA 5 cut(s) 117, 123, 459, 722, 1051
TaqII GACCGA 1 cut(s) 873
TasI AATT 5 cut(s) 529, 583, 664, 677, 1264
TfiI GAWTC 1 cut(s) 65
Tru1I TTAA 4 cut(s) 768, 936, 1005, 1306
Tru9I TTAA 4 cut(s) 768, 936, 1005, 1306
TscAI CASTG 2 cut(s) 262, 1072
TseFI GTSAC 2 cut(s) 434, 851
TseI GCWGC 4 cut(s) 25, 28, 31, 1011
Tsp45I GTSAC 2 cut(s) 434, 851
TspDTI ATGAA 6 cut(s) 169, 171, 333, 723, 740, 840
TspRI CASTG 2 cut(s) 262, 1072
VpaK11BI GGWCC 1 cut(s) 236
XapI RAATTY 3 cut(s) 529, 664, 1264
XceI RCATGY 2 cut(s) 62, 1084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.