Rorug05G0536200

Reverse transcriptase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000102
Physical Location & Seq
Reverse (-)
72442915 .. 72446055
3141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0536200.1

Sequence Viewer

Length: 1287 bp
ATGGCTGAAGGCCTTGGCATAAGAGAGAAACGTGATGTGTTTGTGTTTGGTCTTGGCACCACGCAAATCCTATATGTGATCAAACCAGAAGCAGTGAGGGAGATCACAACCTGCACATCCTTGGACTTGGGGAAACCCACATACCAATTCAAACAGCGTGGTCCTTTACTTGGTAAAGGTATTTTGACCTCCAATGGAGCCTCGTGGGCTCATCAGCGCAAGGTCATGGCTCCTGAACTTTACATGGAGAAGGTCAAGGGAATGATCAACTTAATTACCGAATCCTCGAATACTCTGGTGAACTTGTGGAACAGTAAAATTGATGCTGGCAAAGGAGTTGCAGACATAAAAATCGACAACGATTTGAGAAGCTTCTCTGGTGATGTTATCTCGAGGGCATGTTTTGGGAGCAGTTATACCAAAGGGGTACAGATTTTTGATAAACTAAGGCAACTCCAGGAGGCCATGGGCAGGAAAGTCTTTGGGGGTGCAGTTCCTGGAATGAGACACCTTCCTACAAAGAGCAATAGGGAAGAACGGGCATTAGAAAAGGAGGTTGCGAGGTTGATACTGCAATTAGTGAAGGAGAGACAGGCAGCTGGGCACGAAAAAGACTTGTTGCAAATGATTCTTGAGGGTGCAAGAGCCAGTGATCTCAGTCAAGATGCAGCAGACAGCTTCATTGTTGATAATTGCAAGAACATATACTTAGCTGGATATGAAACCACAGCTACTTCTGCCACATGGTGCCTCATGCTGTTGGCTTCGAATCAAGAATGGCGAGAACGCATTAGAGCAGAGGTACTTCAAGTTTGCCAAGGCCGCGTCCCAGATGCTGATATGCTTCGCAAGATGAAACAGCTAACAATGGTGATTCATGAATCATTAAGGCTCTACCCACCCGTTACCATTATGTCAAGGGAGGCATTCAAGGACATGAAATTTGGAGACATTCATGTTCCAAAGAGTGTCAATGTTTGGACCAGTGTGGCGACAATACACACTGATCCAGAAATATGGGGACCTGATGCCTACGATTTCAAGCCGGAAAGATTTGCAAATGGGATCACTGGAGCTTGCAAGCTTCCCTACTTGTACATGCCATTCGGGCTTGGACCTCGAGTGTGTCTTGGACAGAACTTGGCCATGATCGAACTCAAGGTTGTCATAGCTCTCATAGTCACCAACTTCTCATTCTCACTTTCGCCCAATTACAGTCACAGACCTGCTCAAAGATTGGTTGTAGAGCCAGAAACCGGCGTCGATCTTTTGATGAAGAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

428

Amino Acids

47.86

Weight (kDa)

8.99

Isoelectric Point (pI)

34.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 12 - 418 9.6e-77 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 119, 1234
AccB1I GGYRCC 2 cut(s) 56, 747
AccII CGCG 1 cut(s) 825
AciI CCGC 1 cut(s) 823
AclWI GGATC 2 cut(s) 1001, 1073
AcoI YGGCCR 1 cut(s) 1143
AcsI RAATTY 1 cut(s) 941
AcuI CTGAAG 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 1260
AdeI CACNNNGTG 1 cut(s) 747
AfaI GTAC 3 cut(s) 429, 804, 1097
AfiI CCNNNNNNNGG 3 cut(s) 170, 471, 1256
AgsI TTSAA 4 cut(s) 151, 809, 931, 1042
AjnI CCWGG 2 cut(s) 456, 496
AjuI GAANNNNNNNTTGG 2 cut(s) 1178, 1210
Alw26I GTCTC 3 cut(s) 499, 583, 942
AlwI GGATC 2 cut(s) 1001, 1073
AlwNI CAGNNNCTG 2 cut(s) 497, 836
Ama87I CYCGRG 2 cut(s) 391, 1119
AoxI GGCC 4 cut(s) 10, 462, 820, 1143
ApeKI GCWGC 2 cut(s) 596, 668
ApoI RAATTY 1 cut(s) 941
ArsI GACNNNNNNTTYG 2 cut(s) 926, 958
AspLEI GCGC 1 cut(s) 219
AspS9I GGNCC 4 cut(s) 161, 981, 1022, 1115
AsuHPI GGTGA 4 cut(s) 310, 392, 883, 1174
AsuII TTCGAA 1 cut(s) 767
AvaI CYCGRG 2 cut(s) 391, 1119
AvaII GGWCC 4 cut(s) 161, 981, 1022, 1115
BaeGI GKGCMC 1 cut(s) 606
BalI TGGCCA 1 cut(s) 1145
BanI GGYRCC 2 cut(s) 56, 747
BanII GRGCYC 1 cut(s) 211
BauI CACGAG 1 cut(s) 202
BbvI GCAGC 2 cut(s) 608, 680
BciT130I CCWGG 2 cut(s) 458, 498
BclI TGATCA 2 cut(s) 78, 264
BcoDI GTCTC 3 cut(s) 499, 583, 942
BfuAI ACCTGC 2 cut(s) 119, 1234
BglI GCCNNNNNGGC 2 cut(s) 206, 1108
BisI GCNGC 3 cut(s) 597, 669, 823
BlsI GCNGC 3 cut(s) 598, 670, 824
Bme1390I CCNGG 2 cut(s) 458, 498
Bme18I GGWCC 4 cut(s) 161, 981, 1022, 1115
BmeT110I CYCGRG 2 cut(s) 391, 1119
BmgT120I GGNCC 4 cut(s) 161, 981, 1022, 1115
BmiI GGNNCC 5 cut(s) 58, 199, 231, 749, 1023
BmrFI CCNGG 2 cut(s) 458, 498
BmsI GCATC 4 cut(s) 313, 655, 823, 1018
BpmI CTGGAG 2 cut(s) 440, 1092
Bpu14I TTCGAA 1 cut(s) 767
BpuEI CTTGAG 2 cut(s) 653, 1142
BsaHI GRCGYC 1 cut(s) 1260
BsaJI CCNNGG 4 cut(s) 13, 120, 465, 817
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 471, 1256
Bse118I RCCGGY 1 cut(s) 1256
Bse1I ACTGG 3 cut(s) 648, 984, 1075
BseBI CCWGG 2 cut(s) 458, 498
BseDI CCNNGG 4 cut(s) 13, 120, 465, 817
BseGI GGATG 1 cut(s) 116
BseLI CCNNNNNNNGG 3 cut(s) 170, 471, 1256
BseMII CTCAG 1 cut(s) 670
BseNI ACTGG 3 cut(s) 648, 984, 1075
BseSI GKGCMC 1 cut(s) 606
BseXI GCAGC 2 cut(s) 608, 680
BseYI CCCAGC 1 cut(s) 599
BsgI GTGCAG 2 cut(s) 97, 510
Bsh1236I CGCG 1 cut(s) 825
BshFI GGCC 4 cut(s) 12, 464, 822, 1145
BshNI GGYRCC 2 cut(s) 56, 747
BsiHKCI CYCGRG 2 cut(s) 391, 1119
BsiSI CCGG 2 cut(s) 1046, 1257
BslFI GGGAC 2 cut(s) 812, 1035
BslI CCNNNNNNNGG 3 cut(s) 170, 471, 1256
BsmAI GTCTC 3 cut(s) 499, 583, 942
BsmFI GGGAC 2 cut(s) 812, 1035
BsmI GAATGC 1 cut(s) 926
BsnI GGCC 4 cut(s) 12, 464, 822, 1145
BsoBI CYCGRG 2 cut(s) 391, 1119
Bsp119I TTCGAA 1 cut(s) 767
Bsp1286I GDGCHC 2 cut(s) 211, 606
Bsp1407I TGTACA 1 cut(s) 1095
Bsp143I GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
Bsp19I CCATGG 1 cut(s) 465
BspACI CCGC 1 cut(s) 823
BspANI GGCC 4 cut(s) 12, 464, 822, 1145
BspCNI CTCAG 1 cut(s) 669
BspFNI CGCG 1 cut(s) 825
BspHI TCATGA 1 cut(s) 877
BspLI GGNNCC 5 cut(s) 58, 199, 231, 749, 1023
BspMI ACCTGC 2 cut(s) 119, 1234
BspPI GGATC 2 cut(s) 1001, 1073
BspT104I TTCGAA 1 cut(s) 767
BspT107I GGYRCC 2 cut(s) 56, 747
BsrFI RCCGGY 1 cut(s) 1256
BsrGI TGTACA 1 cut(s) 1095
BsrI ACTGG 3 cut(s) 648, 984, 1075
BssAI RCCGGY 1 cut(s) 1256
BssECI CCNNGG 4 cut(s) 13, 120, 465, 817
BssMI GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
BssNI GRCGYC 1 cut(s) 1260
BssSI CACGAG 1 cut(s) 202
BssT1I CCWWGG 4 cut(s) 13, 120, 465, 817
Bst2BI CACGAG 1 cut(s) 202
Bst2UI CCWGG 2 cut(s) 458, 498
Bst4CI ACNGT 2 cut(s) 314, 1217
BstACI GRCGYC 1 cut(s) 1260
BstAUI TGTACA 1 cut(s) 1095
BstBI TTCGAA 1 cut(s) 767
BstC8I GCNNGC 3 cut(s) 328, 1078, 1082
BstDEI CTNAG 3 cut(s) 446, 656, 709
BstDSI CCRYGG 1 cut(s) 465
BstF5I GGATG 1 cut(s) 116
BstFNI CGCG 1 cut(s) 825
BstHHI GCGC 1 cut(s) 219
BstKTI GATC 8 cut(s) 81, 105, 267, 655, 1009, 1068, 1152, 1267
BstMAI GTCTC 3 cut(s) 499, 583, 942
BstMBI GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
BstMWI GCNNNNNNNGC 4 cut(s) 206, 737, 822, 1108
BstNI CCWGG 2 cut(s) 458, 498
BstNSI RCATGY 2 cut(s) 402, 1102
BstSCI CCNGG 2 cut(s) 456, 496
BstSLI GKGCMC 1 cut(s) 606
BstUI CGCG 1 cut(s) 825
BstV1I GCAGC 2 cut(s) 608, 680
BstXI CCANNNNNNTGG 1 cut(s) 1017
BsuRI GGCC 4 cut(s) 12, 464, 822, 1145
BtgI CCRYGG 1 cut(s) 465
BtsCI GGATG 1 cut(s) 116
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 5 cut(s) 99, 655, 991, 1002, 1068
BveI ACCTGC 2 cut(s) 119, 1234
Cac8I GCNNGC 3 cut(s) 328, 1078, 1082
CaiI CAGNNNCTG 2 cut(s) 497, 836
CciI TCATGA 1 cut(s) 877
CfoI GCGC 1 cut(s) 219
Cfr10I RCCGGY 1 cut(s) 1256
Cfr13I GGNCC 4 cut(s) 161, 981, 1022, 1115
CseI GACGC 2 cut(s) 814, 1249
Csp6I GTAC 3 cut(s) 428, 803, 1096
CspCI CAANNNNNGTGG 2 cut(s) 139, 174
CviQI GTAC 3 cut(s) 428, 803, 1096
DdeI CTNAG 3 cut(s) 446, 656, 709
DpnI GATC 8 cut(s) 80, 104, 266, 654, 1008, 1067, 1151, 1266
DpnII GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
DraIII CACNNNGTG 1 cut(s) 747
EaeI YGGCCR 1 cut(s) 1143
Eco130I CCWWGG 4 cut(s) 13, 120, 465, 817
Eco147I AGGCCT 1 cut(s) 12
Eco24I GRGCYC 1 cut(s) 211
Eco47I GGWCC 4 cut(s) 161, 981, 1022, 1115
Eco57I CTGAAG 1 cut(s) 27
Eco88I CYCGRG 2 cut(s) 391, 1119
EcoO109I RGGNCCY 1 cut(s) 1022
EcoRII CCWGG 2 cut(s) 456, 496
EcoT14I CCWWGG 4 cut(s) 13, 120, 465, 817
EcoT38I GRGCYC 1 cut(s) 211
ErhI CCWWGG 4 cut(s) 13, 120, 465, 817
FaqI GGGAC 2 cut(s) 812, 1035
FbaI TGATCA 2 cut(s) 78, 264
Fnu4HI GCNGC 3 cut(s) 597, 669, 823
FokI GGATG 1 cut(s) 103
FriOI GRGCYC 1 cut(s) 211
Fsp4HI GCNGC 3 cut(s) 597, 669, 823
GlaI GCGC 1 cut(s) 218
GluI GCNGC 3 cut(s) 597, 669, 823
GsaI CCCAGC 1 cut(s) 603
GsuI CTGGAG 2 cut(s) 440, 1092
HaeIII GGCC 4 cut(s) 12, 464, 822, 1145
HapII CCGG 2 cut(s) 1046, 1257
HgaI GACGC 2 cut(s) 814, 1249
HhaI GCGC 1 cut(s) 219
Hin1I GRCGYC 1 cut(s) 1260
Hin6I GCGC 1 cut(s) 217
HinP1I GCGC 1 cut(s) 217
HindIII AAGCTT 3 cut(s) 370, 1082, 1280
HinfI GANTC 5 cut(s) 281, 628, 769, 874, 881
HpaII CCGG 2 cut(s) 1046, 1257
HphI GGTGA 4 cut(s) 310, 392, 883, 1174
Hpy166II GTNNAC 1 cut(s) 301
Hpy188III TCNNGA 7 cut(s) 233, 391, 632, 662, 773, 878, 1010
Hpy8I GTNNAC 1 cut(s) 301
Hpy99I CGWCG 1 cut(s) 1265
HpyAV CCTTC 3 cut(s) 244, 521, 577
HpyCH4III ACNGT 2 cut(s) 314, 1217
HpyCH4IV ACGT 1 cut(s) 31
HpyF10VI GCNNNNNNNGC 4 cut(s) 206, 737, 822, 1108
HpyF3I CTNAG 3 cut(s) 446, 656, 709
HpySE526I ACGT 1 cut(s) 31
Hsp92I GRCGYC 1 cut(s) 1260
HspAI GCGC 1 cut(s) 217
Ksp22I TGATCA 2 cut(s) 78, 264
Kzo9I GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
LmnI GCTCC 4 cut(s) 197, 235, 408, 1073
Lsp1109I GCAGC 2 cut(s) 608, 680
LweI GCATC 4 cut(s) 313, 655, 823, 1018
MaeII ACGT 1 cut(s) 31
MaeIII GTNAC 3 cut(s) 904, 1180, 1217
MalI GATC 8 cut(s) 80, 104, 266, 654, 1008, 1067, 1151, 1266
MboI GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
MboII GAAGA 1 cut(s) 545
MhlI GDGCHC 2 cut(s) 211, 606
MlsI TGGCCA 1 cut(s) 1145
MluCI AATT 7 cut(s) 146, 273, 318, 575, 691, 941, 1210
MluNI TGGCCA 1 cut(s) 1145
Mox20I TGGCCA 1 cut(s) 1145
MscI TGGCCA 1 cut(s) 1145
MseI TTAA 2 cut(s) 272, 887
Msp20I TGGCCA 1 cut(s) 1145
MspA1I CMGCKG 1 cut(s) 599
MspI CCGG 2 cut(s) 1046, 1257
MspR9I CCNGG 2 cut(s) 458, 498
Mva1269I GAATGC 1 cut(s) 926
MvaI CCWGG 2 cut(s) 458, 498
MvnI CGCG 1 cut(s) 825
MwoI GCNNNNNNNGC 4 cut(s) 206, 737, 822, 1108
NcoI CCATGG 1 cut(s) 465
NdeII GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
NlaIV GGNNCC 5 cut(s) 58, 199, 231, 749, 1023
NmuCI GTSAC 2 cut(s) 1180, 1217
NspI RCATGY 2 cut(s) 402, 1102
NspV TTCGAA 1 cut(s) 767
PaeR7I CTCGAG 2 cut(s) 391, 1119
PagI TCATGA 1 cut(s) 877
PceI AGGCCT 1 cut(s) 12
PctI GAATGC 1 cut(s) 926
PfeI GAWTC 5 cut(s) 281, 628, 769, 874, 881
PfoI TCCNGGA 2 cut(s) 456, 496
PkrI GCNGC 3 cut(s) 598, 670, 824
PpuMI RGGWCCY 1 cut(s) 1022
Psp5II RGGWCCY 1 cut(s) 1022
Psp6I CCWGG 2 cut(s) 456, 496
PspFI CCCAGC 1 cut(s) 599
PspGI CCWGG 2 cut(s) 456, 496
PspN4I GGNNCC 5 cut(s) 58, 199, 231, 749, 1023
PspPI GGNCC 4 cut(s) 161, 981, 1022, 1115
PspPPI RGGWCCY 1 cut(s) 1022
PspXI VCTCGAGB 1 cut(s) 1119
PstNI CAGNNNCTG 2 cut(s) 497, 836
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 3 cut(s) 429, 804, 1097
RsaNI GTAC 3 cut(s) 428, 803, 1096
SaqAI TTAA 2 cut(s) 272, 887
SatI GCNGC 3 cut(s) 597, 669, 823
Sau3AI GATC 8 cut(s) 78, 102, 264, 652, 1006, 1065, 1149, 1264
Sau96I GGNCC 4 cut(s) 161, 981, 1022, 1115
ScrFI CCNGG 2 cut(s) 458, 498
SduI GDGCHC 2 cut(s) 211, 606
SfaNI GCATC 4 cut(s) 313, 655, 823, 1018
Sfr274I CTCGAG 2 cut(s) 391, 1119
SfuI TTCGAA 1 cut(s) 767
SinI GGWCC 4 cut(s) 161, 981, 1022, 1115
SlaI CTCGAG 2 cut(s) 391, 1119
SmlI CTYRAG 4 cut(s) 391, 632, 1119, 1157
SmoI CTYRAG 4 cut(s) 391, 632, 1119, 1157
Sse9I AATT 7 cut(s) 146, 273, 318, 575, 691, 941, 1210
SseBI AGGCCT 1 cut(s) 12
SsiI CCGC 1 cut(s) 823
StuI AGGCCT 1 cut(s) 12
StyD4I CCNGG 2 cut(s) 456, 496
StyI CCWWGG 4 cut(s) 13, 120, 465, 817
TaaI ACNGT 2 cut(s) 314, 1217
TaiI ACGT 1 cut(s) 34
TaqI TCGA 7 cut(s) 287, 354, 392, 767, 1120, 1152, 1263
TasI AATT 7 cut(s) 146, 273, 318, 575, 691, 941, 1210
TatI WGTACW 1 cut(s) 1095
TauI GCSGC 1 cut(s) 825
TfiI GAWTC 5 cut(s) 281, 628, 769, 874, 881
Tru1I TTAA 2 cut(s) 272, 887
Tru9I TTAA 2 cut(s) 272, 887
TscAI CASTG 5 cut(s) 99, 655, 991, 1009, 1075
TseFI GTSAC 2 cut(s) 1180, 1217
TseI GCWGC 2 cut(s) 596, 668
Tsp45I GTSAC 2 cut(s) 1180, 1217
TspDTI ATGAA 7 cut(s) 670, 735, 866, 869, 894, 944, 953
TspRI CASTG 5 cut(s) 99, 655, 991, 1009, 1075
VpaK11BI GGWCC 4 cut(s) 161, 981, 1022, 1115
XapI RAATTY 1 cut(s) 941
XceI RCATGY 2 cut(s) 402, 1102
XhoI CTCGAG 2 cut(s) 391, 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.