Rroxscaffold_7G00212730

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000102
Physical Location & Seq
Reverse (-)
63192345 .. 63199852
7508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00212730.1

Sequence Viewer

Length: 1506 bp
ATGAAATCTGCGTCCGTCGACATTGTCATGTATCGGCAAACTCCTCGTCTTCCTCCCCCGGTGCAGCCAATTCTCCGATCCTCGGCCGCGCTTCGAAGCCTCCCCAATCGAAGCCCAACTCCACTTCCACCTCAAATTCCTTGTCAACTTCCAAGGCTTCGCCTCGAAGAGACCCAAATCGCCACCTCACATTCCGGAAGTTTGAATGTGGATTTGATAAATTTAAGAAAGAAGCTTGAATGCATGATACATGTGACTGTGAGTGCTGAAGTTGAAATATGGTCACATCGGATTACGATCAGATGGACGTCCATCATCACCAGCTTACCCGGCTTTCCCGGTGACCTTCCATTCAGACTTGAAACTGGATACATCGGAGTTGGAGACTCGGATAACGTGCAACTATTCTATTACTTCATTGAGTCCCAAGGATCTCCGGTGTATGATCCTCTTATGCTTTGGCTCACCGGAGGTCCTGGTTGTTCTGGTTTTTCTGCCCTTGTATATGAAAATATTGGTCCTCTGTCATTTGACTATGCACACTCGTTTGACAACAAGCCACAGCTGAAGTTGAACCCATACTCATGGACAAAGGTTGCCAACATAATATTTATAGATGCCCCTGTCGGGACAGGATTCTCATATGCTAAAAATTGGGACGAATATCCCAATTTGAATGACACAATATCAGCTGCACAAACATATCAGTTTCTTAGAAAGTGGCTTGTGGATCACCCCAGGTTCATCTCCAATCCACTTTACATTACTGGAGATTCTTATGCAGGCATAGTTCTTCCGATCATCGTTCAAAAAATATCTGATGGTAATGAAGATGGACTTGAGCCAGCAATGAATCTCCAAGGATACGTCCTTGGCAACCCAGTCACAGATGAAGTACAAGATGCCAATTCCCAAGTACCCTTTGCTTACCTAAAAGCTCTTATATCACATGATCTATACCAGTCAACCAAAAGAAATTGCAAAGGCGAGTATGTGAATGTCGATCCGAACAATGCTGTATGTTTGTATGATCTTGAACTTGTCAACGAGGAATACAATTATATATCTTCTCGTCTTTGGGCGAACGATAAAACTGTTCAGTCTGCCCTTCATGTTGTAAAGGGAAGCATCAAGGAATGGGTGAGATGCAATACGAGCTTAAAAGATTCGTATGTAAATGATGTTTCTTCTACCGTTATTTATCACAAGAATTTGATACGAAAAAGCTATAGAGTTCTAATTTACAGTGGTGATGTTGATATGGCTATTCCATATGTGGGTACTTTTGCTTGGATAGAATCTCTGAACTTGACTATTGATGATGAGATTTCATGGAAACCTTGGTTCGTCAATGCACAAGTTGCAGGATACAAAACGAAGTATACATTGGGAAAATATGAGTTGACATATACAACCATAAAGGGTGCTGGTCACACAGCTCCAGAATACAAACCTGAAGCATGCCTTGCTATGATCAGCAGGTGGTTTGCATTATATCCTCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

501

Amino Acids

56.49

Weight (kDa)

5.9

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 110 - 350 6.9e-79 Serine carboxypeptidase
Peptidase_S10 PF00450 352 - 496 1.7e-35 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1470
AatII GACGTC 1 cut(s) 311
Acc36I ACCTGC 1 cut(s) 1470
AccI GTMKAC 2 cut(s) 18, 1382
AccII CGCG 1 cut(s) 89
AccIII TCCGGA 1 cut(s) 194
AciI CCGC 1 cut(s) 87
AclWI GGATC 5 cut(s) 72, 439, 440, 738, 998
AcoI YGGCCR 1 cut(s) 84
AcsI RAATTY 3 cut(s) 135, 220, 1210
AcuI CTGAAG 3 cut(s) 288, 587, 1476
AcyI GRCGYC 1 cut(s) 308
AfaI GTAC 3 cut(s) 897, 918, 1282
AfiI CCNNNNNNNGG 3 cut(s) 82, 627, 1277
AflIII ACRYGT 1 cut(s) 250
AgsI TTSAA 8 cut(s) 205, 239, 275, 362, 574, 676, 809, 1037
AjnI CCWGG 2 cut(s) 475, 737
AjuI GAANNNNNNNTTGG 2 cut(s) 1370, 1402
AluBI AGCT 8 cut(s) 235, 324, 565, 692, 938, 1158, 1227, 1439
AluI AGCT 8 cut(s) 235, 324, 565, 692, 938, 1158, 1227, 1439
Alw26I GTCTC 2 cut(s) 164, 378
AlwI GGATC 5 cut(s) 72, 439, 440, 738, 998
Aor13HI TCCGGA 1 cut(s) 194
AoxI GGCC 1 cut(s) 84
ApeKI GCWGC 2 cut(s) 64, 692
ApoI RAATTY 3 cut(s) 135, 220, 1210
ArsI GACNNNNNNTTYG 4 cut(s) 31, 63, 127, 159
AspLEI GCGC 1 cut(s) 91
AspS9I GGNCC 2 cut(s) 473, 518
AsuC2I CCSGG 3 cut(s) 59, 330, 339
AsuHPI GGTGA 6 cut(s) 310, 353, 457, 725, 1153, 1262
AsuII TTCGAA 1 cut(s) 94
AvaII GGWCC 2 cut(s) 473, 518
BbsI GAAGAC 1 cut(s) 41
BbvI GCAGC 2 cut(s) 76, 679
BccI CCATC 4 cut(s) 297, 320, 815, 827
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BciT130I CCWGG 2 cut(s) 477, 739
BciVI GTATCC 3 cut(s) 362, 857, 1361
BclI TGATCA 1 cut(s) 1473
BcnI CCSGG 3 cut(s) 59, 330, 339
BcoDI GTCTC 2 cut(s) 164, 378
BfmI CTRYAG 2 cut(s) 1228, 1502
BfuAI ACCTGC 1 cut(s) 1470
BfuI GTATCC 3 cut(s) 362, 857, 1361
BisI GCNGC 3 cut(s) 65, 87, 693
BlsI GCNGC 3 cut(s) 66, 88, 694
Bme1390I CCNGG 5 cut(s) 59, 330, 339, 477, 739
Bme18I GGWCC 2 cut(s) 473, 518
BmgT120I GGNCC 2 cut(s) 473, 518
BmrFI CCNGG 5 cut(s) 59, 330, 339, 477, 739
BmrI ACTGGG 1 cut(s) 875
BmsI GCATC 4 cut(s) 607, 892, 1136, 1137
BmuI ACTGGG 1 cut(s) 875
BpiI GAAGAC 1 cut(s) 41
BpmI CTGGAG 2 cut(s) 789, 1425
Bpu14I TTCGAA 1 cut(s) 94
BpuEI CTTGAG 1 cut(s) 860
BpuMI CCSGG 3 cut(s) 59, 330, 339
BsaBI GATNNNNATC 1 cut(s) 296
BsaHI GRCGYC 1 cut(s) 308
BsaI GGTCTC 1 cut(s) 164
BsaJI CCNNGG 8 cut(s) 57, 81, 152, 427, 737, 859, 871, 1340
BsaWI WCCGGW 3 cut(s) 194, 436, 467
Bsc4I CCNNNNNNNGG 3 cut(s) 82, 627, 1277
Bse1I ACTGG 4 cut(s) 370, 772, 881, 961
Bse3DI GCAATG 1 cut(s) 855
Bse8I GATNNNNATC 1 cut(s) 296
BseAI TCCGGA 1 cut(s) 194
BseBI CCWGG 2 cut(s) 477, 739
BseDI CCNNGG 8 cut(s) 57, 81, 152, 427, 737, 859, 871, 1340
BseJI GATNNNNATC 1 cut(s) 296
BseLI CCNNNNNNNGG 3 cut(s) 82, 627, 1277
BseMI GCAATG 1 cut(s) 855
BseNI ACTGG 4 cut(s) 370, 772, 881, 961
BseRI GAGGAG 1 cut(s) 33
BseX3I CGGCCG 1 cut(s) 84
BseXI GCAGC 2 cut(s) 76, 679
BsgI GTGCAG 2 cut(s) 83, 678
Bsh1236I CGCG 1 cut(s) 89
Bsh1285I CGRYCG 1 cut(s) 87
BshFI GGCC 1 cut(s) 86
BsiEI CGRYCG 1 cut(s) 87
BsiSI CCGG 6 cut(s) 59, 195, 330, 339, 437, 468
BslFI GGGAC 3 cut(s) 409, 643, 671
BslI CCNNNNNNNGG 3 cut(s) 82, 627, 1277
BsmAI GTCTC 2 cut(s) 164, 378
BsmFI GGGAC 3 cut(s) 409, 643, 671
BsmI GAATGC 1 cut(s) 245
BsnI GGCC 1 cut(s) 86
Bso31I GGTCTC 1 cut(s) 164
Bsp119I TTCGAA 1 cut(s) 94
Bsp13I TCCGGA 1 cut(s) 194
BspACI CCGC 1 cut(s) 87
BspANI GGCC 1 cut(s) 86
BspEI TCCGGA 1 cut(s) 194
BspFNI CGCG 1 cut(s) 89
BspMI ACCTGC 1 cut(s) 1470
BspPI GGATC 5 cut(s) 72, 439, 440, 738, 998
BspT104I TTCGAA 1 cut(s) 94
BspTNI GGTCTC 1 cut(s) 164
BsrDI GCAATG 1 cut(s) 855
BsrI ACTGG 4 cut(s) 370, 772, 881, 961
BssECI CCNNGG 8 cut(s) 57, 81, 152, 427, 737, 859, 871, 1340
BssNAI GTATAC 1 cut(s) 1383
BssNI GRCGYC 1 cut(s) 308
BssT1I CCWWGG 5 cut(s) 152, 427, 859, 871, 1340
Bst1107I GTATAC 1 cut(s) 1383
Bst2UI CCWGG 2 cut(s) 477, 739
Bst4CI ACNGT 4 cut(s) 259, 1096, 1195, 1247
Bst6I CTCTTC 1 cut(s) 162
BstACI GRCGYC 1 cut(s) 308
BstAPI GCANNNNNTGC 2 cut(s) 1361, 1466
BstBI TTCGAA 1 cut(s) 94
BstC8I GCNNGC 3 cut(s) 784, 846, 1462
BstDEI CTNAG 1 cut(s) 713
BstEII GGTNACC 1 cut(s) 341
BstFNI CGCG 1 cut(s) 89
BstHHI GCGC 1 cut(s) 91
BstMAI GTCTC 2 cut(s) 164, 378
BstMCI CGRYCG 1 cut(s) 87
BstMWI GCNNNNNNNGC 4 cut(s) 330, 1155, 1361, 1466
BstNI CCWGG 2 cut(s) 477, 739
BstNSI RCATGY 2 cut(s) 254, 1464
BstPI GGTNACC 1 cut(s) 341
BstSCI CCNGG 5 cut(s) 57, 328, 337, 475, 737
BstSFI CTRYAG 2 cut(s) 1228, 1502
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 2 cut(s) 76, 679
BstV2I GAAGAC 1 cut(s) 41
BstX2I RGATCY 1 cut(s) 431
BstXI CCANNNNNNTGG 1 cut(s) 585
BstYI RGATCY 1 cut(s) 431
BstZ17I GTATAC 1 cut(s) 1383
BstZI CGGCCG 1 cut(s) 84
BsuI GTATCC 3 cut(s) 362, 857, 1361
BsuRI GGCC 1 cut(s) 86
BtsIMutI CAGTG 1 cut(s) 1252
BveI ACCTGC 1 cut(s) 1470
Cac8I GCNNGC 3 cut(s) 784, 846, 1462
CfoI GCGC 1 cut(s) 91
Cfr13I GGNCC 2 cut(s) 473, 518
Csp6I GTAC 3 cut(s) 896, 917, 1281
CviAII CATG 8 cut(s) 28, 244, 251, 585, 950, 1112, 1332, 1461
CviQI GTAC 3 cut(s) 896, 917, 1281
DdeI CTNAG 1 cut(s) 713
EaeI YGGCCR 1 cut(s) 84
EagI CGGCCG 1 cut(s) 84
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
EclXI CGGCCG 1 cut(s) 84
Eco130I CCWWGG 5 cut(s) 152, 427, 859, 871, 1340
Eco31I GGTCTC 1 cut(s) 164
Eco47I GGWCC 2 cut(s) 473, 518
Eco52I CGGCCG 1 cut(s) 84
Eco57I CTGAAG 3 cut(s) 288, 587, 1476
Eco91I GGTNACC 1 cut(s) 341
EcoO109I RGGNCCY 1 cut(s) 473
EcoO65I GGTNACC 1 cut(s) 341
EcoRII CCWGG 2 cut(s) 475, 737
EcoT14I CCWWGG 5 cut(s) 152, 427, 859, 871, 1340
EcoT22I ATGCAT 1 cut(s) 245
ErhI CCWWGG 5 cut(s) 152, 427, 859, 871, 1340
FaeI CATG 8 cut(s) 31, 247, 254, 588, 953, 1115, 1335, 1464
FalI AAGNNNNNCTT 4 cut(s) 822, 854, 1449, 1481
FaqI GGGAC 3 cut(s) 409, 643, 671
FatI CATG 8 cut(s) 27, 243, 250, 584, 949, 1111, 1331, 1460
FauNDI CATATG 2 cut(s) 643, 1273
FbaI TGATCA 1 cut(s) 1473
FblI GTMKAC 2 cut(s) 18, 1382
Fnu4HI GCNGC 3 cut(s) 65, 87, 693
Fsp4HI GCNGC 3 cut(s) 65, 87, 693
GlaI GCGC 1 cut(s) 90
GluI GCNGC 3 cut(s) 65, 87, 693
GsuI CTGGAG 2 cut(s) 789, 1425
HaeIII GGCC 1 cut(s) 86
HapII CCGG 6 cut(s) 59, 195, 330, 339, 437, 468
HhaI GCGC 1 cut(s) 91
Hin1I GRCGYC 1 cut(s) 308
Hin1II CATG 8 cut(s) 31, 247, 254, 588, 953, 1115, 1335, 1464
Hin6I GCGC 1 cut(s) 89
HinP1I GCGC 1 cut(s) 89
HincII GTYRAC 5 cut(s) 19, 146, 966, 1045, 1404
HindII GTYRAC 5 cut(s) 19, 146, 966, 1045, 1404
HindIII AAGCTT 1 cut(s) 233
HinfI GANTC 7 cut(s) 386, 422, 636, 773, 853, 1166, 1298
HpaII CCGG 6 cut(s) 59, 195, 330, 339, 437, 468
HphI GGTGA 6 cut(s) 310, 353, 457, 725, 1153, 1262
Hpy166II GTNNAC 6 cut(s) 19, 146, 966, 1045, 1383, 1404
Hpy188III TCNNGA 4 cut(s) 195, 628, 1034, 1442
Hpy8I GTNNAC 6 cut(s) 19, 146, 966, 1045, 1383, 1404
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 2 cut(s) 356, 1118
HpyCH4III ACNGT 4 cut(s) 259, 1096, 1195, 1247
HpyCH4IV ACGT 3 cut(s) 308, 396, 867
HpyF10VI GCNNNNNNNGC 4 cut(s) 330, 1155, 1361, 1466
HpyF3I CTNAG 1 cut(s) 713
HpySE526I ACGT 3 cut(s) 308, 396, 867
Hsp92I GRCGYC 1 cut(s) 308
Hsp92II CATG 8 cut(s) 31, 247, 254, 588, 953, 1115, 1335, 1464
HspAI GCGC 1 cut(s) 89
Kpn2I TCCGGA 1 cut(s) 194
Ksp22I TGATCA 1 cut(s) 1473
LmnI GCTCC 1 cut(s) 1444
Lsp1109I GCAGC 2 cut(s) 76, 679
LweI GCATC 4 cut(s) 607, 892, 1136, 1137
MaeII ACGT 3 cut(s) 308, 396, 867
MaeIII GTNAC 5 cut(s) 253, 282, 341, 883, 1430
MboII GAAGA 6 cut(s) 41, 179, 785, 842, 1059, 1179
MflI RGATCY 1 cut(s) 431
MlyI GAGTC 2 cut(s) 380, 431
MmeI TCCRAC 1 cut(s) 361
Mph1103I ATGCAT 1 cut(s) 245
MroI TCCGGA 1 cut(s) 194
MseI TTAA 2 cut(s) 224, 1160
MslI CAYNNNNRTG 2 cut(s) 26, 583
MspA1I CMGCKG 2 cut(s) 565, 692
MspI CCGG 6 cut(s) 59, 195, 330, 339, 437, 468
MspR9I CCNGG 5 cut(s) 59, 330, 339, 477, 739
Mva1269I GAATGC 1 cut(s) 245
MvaI CCWGG 2 cut(s) 477, 739
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 4 cut(s) 330, 1155, 1361, 1466
NciI CCSGG 3 cut(s) 59, 330, 339
NdeI CATATG 2 cut(s) 643, 1273
NlaIII CATG 8 cut(s) 31, 247, 254, 588, 953, 1115, 1335, 1464
NmeAIII GCCGAG 1 cut(s) 62
NmuCI GTSAC 5 cut(s) 253, 282, 341, 883, 1430
NsiI ATGCAT 1 cut(s) 245
NspI RCATGY 2 cut(s) 254, 1464
NspV TTCGAA 1 cut(s) 94
PaeI GCATGC 1 cut(s) 1464
PaqCI CACCTGC 1 cut(s) 1470
PciI ACATGT 1 cut(s) 250
PctI GAATGC 1 cut(s) 245
PfeI GAWTC 5 cut(s) 636, 773, 853, 1166, 1298
PflFI GACNNNGTC 1 cut(s) 23
PkrI GCNGC 3 cut(s) 66, 88, 694
PleI GAGTC 2 cut(s) 380, 430
PpsI GAGTC 2 cut(s) 380, 430
PpuMI RGGWCCY 1 cut(s) 473
PscI ACATGT 1 cut(s) 250
Psp5II RGGWCCY 1 cut(s) 473
Psp6I CCWGG 2 cut(s) 475, 737
PspEI GGTNACC 1 cut(s) 341
PspGI CCWGG 2 cut(s) 475, 737
PspPI GGNCC 2 cut(s) 473, 518
PspPPI RGGWCCY 1 cut(s) 473
PsuI RGATCY 1 cut(s) 431
PsyI GACNNNGTC 1 cut(s) 23
PvuII CAGCTG 2 cut(s) 565, 692
RsaI GTAC 3 cut(s) 897, 918, 1282
RsaNI GTAC 3 cut(s) 896, 917, 1281
RseI CAYNNNNRTG 2 cut(s) 26, 583
SalI GTCGAC 1 cut(s) 17
SaqAI TTAA 2 cut(s) 224, 1160
SatI GCNGC 3 cut(s) 65, 87, 693
Sau96I GGNCC 2 cut(s) 473, 518
SchI GAGTC 2 cut(s) 380, 431
ScrFI CCNGG 5 cut(s) 59, 330, 339, 477, 739
SfaNI GCATC 4 cut(s) 607, 892, 1136, 1137
SfcI CTRYAG 2 cut(s) 1228, 1502
SfuI TTCGAA 1 cut(s) 94
SinI GGWCC 2 cut(s) 473, 518
SmiMI CAYNNNNRTG 2 cut(s) 26, 583
SmlI CTYRAG 1 cut(s) 839
SmoI CTYRAG 1 cut(s) 839
SphI GCATGC 1 cut(s) 1464
SsiI CCGC 1 cut(s) 87
SspI AATATT 2 cut(s) 514, 609
StyD4I CCNGG 5 cut(s) 57, 328, 337, 475, 737
StyI CCWWGG 5 cut(s) 152, 427, 859, 871, 1340
TaaI ACNGT 4 cut(s) 259, 1096, 1195, 1247
TaiI ACGT 3 cut(s) 311, 399, 870
TaqI TCGA 5 cut(s) 18, 94, 109, 165, 1002
TatI WGTACW 1 cut(s) 895
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 5 cut(s) 636, 773, 853, 1166, 1298
Tru1I TTAA 2 cut(s) 224, 1160
Tru9I TTAA 2 cut(s) 224, 1160
TscAI CASTG 1 cut(s) 1252
TseFI GTSAC 5 cut(s) 253, 282, 341, 883, 1430
TseI GCWGC 2 cut(s) 64, 692
Tsp45I GTSAC 5 cut(s) 253, 282, 341, 883, 1430
TspDTI ATGAA 9 cut(s) 17, 406, 522, 733, 843, 866, 906, 1100, 1320
TspGWI ACGGA 1 cut(s) 4
TspRI CASTG 1 cut(s) 1252
Tth111I GACNNNGTC 1 cut(s) 23
VpaK11BI GGWCC 2 cut(s) 473, 518
XapI RAATTY 3 cut(s) 135, 220, 1210
XceI RCATGY 2 cut(s) 254, 1464
XmiI GTMKAC 2 cut(s) 18, 1382
ZraI GACGTC 1 cut(s) 309
Zsp2I ATGCAT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.