Rmu_sc0006782.1_g000015

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006782.1
OG0000102
Physical Location & Seq
Reverse (-)
69736 .. 74698
4963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006782.1_g000015.1.cds

Sequence Viewer

Length: 1887 bp
atgagtgggtctaaagaccacaactcacaccagacccaacaaaaaccaaaaccaggcccaggcccaggcccacaaaggaactgtctgggtggccaggccaccgctccttctgccaccgccgaccaaccgctgccgtacctagccctggatctcagcaaacccagttcgggttacgcccaacacggtgttgcgccaccggcacatgctggaaaagatcgaagccgaactgcaagtcctgaaacaggacgccttcatgtcggagaagccttgatagcttggccgccgtccctcgcagtaaaaaggcgaccacgctccctaacaactcgttggcactcccaacgcctcgaagacgctggaaccaccatatcctcctctgccataaaacaccggcaccgggaccccagatgcgaaggtcacaaaatcctattgatggagaaagacacgcaaattcagggaatcaaaaatcatggacgggtacagtcaccatgctgcaagaagtacttgttctggtggttctttttaacgttgtttcatcaacttccatcatcaagacgctaccaggcttctccggtgacctccccttcaaactcgaaactgggttggtatgttggagtgggtgacttggatgatgtgcagctattctattacttcattgaatccgaaggtagtcctgagcatgaccctcttgtgctttggctcactggtggtcctggttgttctgggttttctgctctcgtctatgaaaatataggtccactatcatttgaccctgcaaattccattggcaacaagccacagttgaagttgaacccatactcatggacaaaggtcgccaacattatattcttagatgcacctgtgggcactggttactcatatgcaaaaacttgggaaggatacagcaatatgagtgacacattatcagctgcagagacttatgaatttctcagaaagtggtttatggaacaccccaagttcctcaaaaatgcactctatgttgccggagattcttattcgggcattgttcttcctattattgttcaggaaatatctgatggtaatgaagatggacgttacccaccaatgaatatccaaggatatgtgcttggtaatccaggaacagacatagatgtcgatgagaattacagagtgccatttgctttcagaaaagcgcttatatcagatgaactatacgagtcactcaaaacaaattgtaagggtgagtatgtcaatgtggatccaaacaatgcgttatgtgtagatgatcttgaccaatacaatgagtgtattgcagacatattcacaccccaaatattggaaccttattgtactgtttcttctccaaatccactagaatcagagcgggattcagacgatctcaatatagactctgctaatctcctttctcttcctcaactttccaagccatggtgtcgaagttacatttatcgtttctcttatatttgggcaaatgataaaactgtacaagatgctcttcacgttcgggagggaagcatcaaggactggcagagatgcaataagaccttatcagcttcatacatatctgatgtttcttctagtctggtttatcatcagaacctcataagaaaaggctatagagttctgatatacagtggtgatcatgacatggtgattccatatttgggtactaaagcttggatagagtctctaaacttgacagttgacagtagttggaaaccgtggttcgtgaatggacaaatcgcaggatacagagtgcagtatacatataaaaagtaccagttgacatttacaactataaagggagggggtcatacagctccagagtacaaacctgaagaatgtcttgctatgataagtaggtggttcgcattctaccctctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

628

Amino Acids

70.58

Weight (kDa)

6.63

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1130
AccB1I GGYRCC 1 cut(s) 390
AccB7I CCANNNNNTGG 2 cut(s) 1315, 1428
AccBSI CCGCTC 2 cut(s) 104, 1363
AccI GTMKAC 1 cut(s) 1763
AciI CCGC 5 cut(s) 102, 117, 128, 281, 1363
AclI AACGTT 1 cut(s) 524
AclWI GGATC 3 cut(s) 156, 1232, 1245
AcoI YGGCCR 2 cut(s) 91, 278
AcsI RAATTY 3 cut(s) 447, 775, 941
AcuI CTGAAG 1 cut(s) 1857
AcyI GRCGYC 1 cut(s) 247
AfaI GTAC 8 cut(s) 137, 477, 500, 1330, 1485, 1669, 1778, 1829
AfeI AGCGCT 1 cut(s) 1173
AgsI TTSAA 4 cut(s) 585, 656, 802, 808
AjnI CCWGG 8 cut(s) 52, 58, 64, 93, 144, 558, 709, 1114
AjuI GAANNNNNNNTTGG 2 cut(s) 827, 859
AloI GAACNNNNNNTCC 2 cut(s) 217, 249
AluBI AGCT 6 cut(s) 275, 637, 926, 1553, 1676, 1820
AluI AGCT 6 cut(s) 275, 637, 926, 1553, 1676, 1820
Alw26I GTCTC 2 cut(s) 926, 1692
AlwI GGATC 3 cut(s) 156, 1232, 1245
Aor51HI AGCGCT 1 cut(s) 1173
AoxI GGCC 6 cut(s) 55, 61, 67, 91, 96, 278
ApeKI GCWGC 4 cut(s) 130, 489, 634, 926
ApoI RAATTY 3 cut(s) 447, 775, 941
ArsI GACNNNNNNTTYG 4 cut(s) 67, 99, 217, 249
AspLEI GCGC 2 cut(s) 193, 1174
AspS9I GGNCC 6 cut(s) 56, 62, 68, 397, 707, 752
AsuC2I CCSGG 1 cut(s) 395
AsuHPI GGTGA 6 cut(s) 474, 583, 629, 1232, 1649, 1663
AvaII GGWCC 3 cut(s) 397, 707, 752
BaeGI GKGCMC 1 cut(s) 866
BalI TGGCCA 1 cut(s) 93
BamHI GGATCC 1 cut(s) 1237
BanI GGYRCC 1 cut(s) 390
BarI GAAGNNNNNNTAC 2 cut(s) 1321, 1353
BbsI GAAGAC 1 cut(s) 354
BbvI GCAGC 4 cut(s) 117, 476, 646, 913
BccI CCATC 4 cut(s) 424, 550, 1049, 1061
BceAI ACGGC 2 cut(s) 118, 268
BciT130I CCWGG 8 cut(s) 54, 60, 66, 95, 146, 560, 711, 1116
BciVI GTATCC 2 cut(s) 890, 1742
BclI TGATCA 1 cut(s) 1639
BcnI CCSGG 1 cut(s) 395
BcoDI GTCTC 2 cut(s) 926, 1692
BfaI CTAG 3 cut(s) 140, 1352, 1578
BfmI CTRYAG 2 cut(s) 927, 1615
BfoI RGCGCY 1 cut(s) 1175
BfuI GTATCC 2 cut(s) 890, 1742
BisI GCNGC 5 cut(s) 131, 281, 490, 635, 927
BlsI GCNGC 5 cut(s) 132, 282, 491, 636, 928
BmcAI AGTACT 1 cut(s) 500
Bme1390I CCNGG 9 cut(s) 54, 60, 66, 95, 146, 395, 560, 711, 1116
Bme18I GGWCC 3 cut(s) 397, 707, 752
BmgT120I GGNCC 6 cut(s) 56, 62, 68, 397, 707, 752
BmiI GGNNCC 6 cut(s) 358, 392, 398, 399, 1239, 1320
BmrFI CCNGG 9 cut(s) 54, 60, 66, 95, 146, 395, 560, 711, 1116
BmrI ACTGGG 2 cut(s) 156, 605
BmsI GCATC 5 cut(s) 395, 841, 1480, 1523, 1524
BmuI ACTGGG 2 cut(s) 156, 605
BoxI GACNNNNGTC 1 cut(s) 827
BpiI GAAGAC 1 cut(s) 354
BpmI CTGGAG 1 cut(s) 1806
Bpu10I CCTNAGC 1 cut(s) 672
BpuMI CCSGG 1 cut(s) 395
BsaHI GRCGYC 1 cut(s) 247
BsaJI CCNNGG 6 cut(s) 58, 64, 144, 1093, 1427, 1721
BsaWI WCCGGW 1 cut(s) 568
Bse118I RCCGGY 2 cut(s) 196, 387
Bse1I ACTGG 6 cut(s) 162, 600, 706, 871, 1529, 1780
BseBI CCWGG 8 cut(s) 54, 60, 66, 95, 146, 560, 711, 1116
BseDI CCNNGG 6 cut(s) 58, 64, 144, 1093, 1427, 1721
BseGI GGATG 1 cut(s) 631
BseMII CTCAG 3 cut(s) 166, 663, 961
BseNI ACTGG 6 cut(s) 162, 600, 706, 871, 1529, 1780
BseRI GAGGAG 1 cut(s) 361
BseSI GKGCMC 1 cut(s) 866
BseXI GCAGC 4 cut(s) 117, 476, 646, 913
BsgI GTGCAG 2 cut(s) 653, 1778
BshFI GGCC 6 cut(s) 57, 63, 69, 93, 98, 280
BshNI GGYRCC 1 cut(s) 390
BsiSI CCGG 5 cut(s) 197, 388, 394, 569, 1002
BslFI GGGAC 2 cut(s) 271, 410
BsmAI GTCTC 2 cut(s) 926, 1692
BsmFI GGGAC 2 cut(s) 271, 410
BsmI GAATGC 1 cut(s) 1871
BsnI GGCC 6 cut(s) 57, 63, 69, 93, 98, 280
Bsp1286I GDGCHC 1 cut(s) 866
Bsp1407I TGTACA 1 cut(s) 1483
Bsp143I GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
Bsp19I CCATGG 1 cut(s) 1427
BspACI CCGC 5 cut(s) 102, 117, 128, 281, 1363
BspANI GGCC 6 cut(s) 57, 63, 69, 93, 98, 280
BspCNI CTCAG 3 cut(s) 165, 664, 960
BspHI TCATGA 1 cut(s) 1642
BspLI GGNNCC 6 cut(s) 358, 392, 398, 399, 1239, 1320
BspMAI CTGCAG 1 cut(s) 931
BspPI GGATC 3 cut(s) 156, 1232, 1245
BspQI GCTCTTC 1 cut(s) 1500
BspT107I GGYRCC 1 cut(s) 390
BsrBI CCGCTC 2 cut(s) 104, 1363
BsrFI RCCGGY 2 cut(s) 196, 387
BsrGI TGTACA 1 cut(s) 1483
BsrI ACTGG 6 cut(s) 162, 600, 706, 871, 1529, 1780
BssAI RCCGGY 2 cut(s) 196, 387
BssECI CCNNGG 6 cut(s) 58, 64, 144, 1093, 1427, 1721
BssMI GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
BssNAI GTATAC 1 cut(s) 1764
BssNI GRCGYC 1 cut(s) 247
BssT1I CCWWGG 2 cut(s) 1093, 1427
Bst1107I GTATAC 1 cut(s) 1764
Bst2UI CCWGG 8 cut(s) 54, 60, 66, 95, 146, 560, 711, 1116
Bst6I CTCTTC 2 cut(s) 1413, 1500
BstACI GRCGYC 1 cut(s) 247
BstAUI TGTACA 1 cut(s) 1483
BstDEI CTNAG 4 cut(s) 152, 672, 847, 947
BstDSI CCRYGG 2 cut(s) 1427, 1721
BstEII GGTNACC 1 cut(s) 571
BstENI CCTNNNNNAGG 1 cut(s) 240
BstF5I GGATG 1 cut(s) 631
BstH2I RGCGCY 1 cut(s) 1175
BstHHI GCGC 2 cut(s) 193, 1174
BstKTI GATC 6 cut(s) 151, 217, 1240, 1267, 1378, 1642
BstMAI GTCTC 2 cut(s) 926, 1692
BstMBI GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
BstMWI GCNNNNNNNGC 3 cut(s) 110, 197, 272
BstNI CCWGG 8 cut(s) 54, 60, 66, 95, 146, 560, 711, 1116
BstNSI RCATGY 1 cut(s) 206
BstPAI GACNNNNGTC 1 cut(s) 827
BstPI GGTNACC 1 cut(s) 571
BstSCI CCNGG 9 cut(s) 52, 58, 64, 93, 144, 393, 558, 709, 1114
BstSFI CTRYAG 2 cut(s) 927, 1615
BstSLI GKGCMC 1 cut(s) 866
BstV1I GCAGC 4 cut(s) 117, 476, 646, 913
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 2 cut(s) 148, 1237
BstXI CCANNNNNNTGG 1 cut(s) 819
BstYI RGATCY 2 cut(s) 148, 1237
BstZ17I GTATAC 1 cut(s) 1764
BsuI GTATCC 2 cut(s) 890, 1742
BsuRI GGCC 6 cut(s) 57, 63, 69, 93, 98, 280
BtgI CCRYGG 2 cut(s) 1427, 1721
BtsCI GGATG 1 cut(s) 631
BtsIMutI CAGTG 3 cut(s) 699, 864, 1639
CciI TCATGA 1 cut(s) 1642
CfoI GCGC 2 cut(s) 193, 1174
Cfr10I RCCGGY 2 cut(s) 196, 387
Cfr13I GGNCC 6 cut(s) 56, 62, 68, 397, 707, 752
CseI GACGC 3 cut(s) 255, 359, 561
Csp6I GTAC 8 cut(s) 136, 476, 499, 1329, 1484, 1668, 1777, 1828
CviAII CATG 9 cut(s) 203, 254, 467, 486, 677, 819, 1428, 1643, 1648
CviQI GTAC 8 cut(s) 136, 476, 499, 1329, 1484, 1668, 1777, 1828
DdeI CTNAG 4 cut(s) 152, 672, 847, 947
DpnI GATC 6 cut(s) 150, 216, 1239, 1266, 1377, 1641
DpnII GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
DrdI GACNNNNNNGTC 1 cut(s) 1130
DseDI GACNNNNNNGTC 1 cut(s) 1130
EaeI YGGCCR 2 cut(s) 91, 278
Eam1104I CTCTTC 2 cut(s) 1413, 1500
EarI CTCTTC 2 cut(s) 1413, 1500
Eco130I CCWWGG 2 cut(s) 1093, 1427
Eco47I GGWCC 3 cut(s) 397, 707, 752
Eco47III AGCGCT 1 cut(s) 1173
Eco57I CTGAAG 1 cut(s) 1857
Eco91I GGTNACC 1 cut(s) 571
EcoNI CCTNNNNNAGG 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 397
EcoO65I GGTNACC 1 cut(s) 571
EcoRII CCWGG 8 cut(s) 52, 58, 64, 93, 144, 558, 709, 1114
EcoT14I CCWWGG 2 cut(s) 1093, 1427
ErhI CCWWGG 2 cut(s) 1093, 1427
FaeI CATG 9 cut(s) 206, 257, 470, 489, 680, 822, 1431, 1646, 1651
FalI AAGNNNNNCTT 6 cut(s) 485, 517, 1479, 1511, 1830, 1862
FaqI GGGAC 2 cut(s) 271, 410
FatI CATG 9 cut(s) 202, 253, 466, 485, 676, 818, 1427, 1642, 1647
FauI CCCGC 1 cut(s) 1356
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 1 cut(s) 1639
FblI GTMKAC 1 cut(s) 1763
Fnu4HI GCNGC 5 cut(s) 131, 281, 490, 635, 927
FokI GGATG 1 cut(s) 638
Fsp4HI GCNGC 5 cut(s) 131, 281, 490, 635, 927
FspBI CTAG 3 cut(s) 140, 1352, 1578
GlaI GCGC 2 cut(s) 192, 1173
GluI GCNGC 5 cut(s) 131, 281, 490, 635, 927
GsuI CTGGAG 1 cut(s) 1806
HaeII RGCGCY 1 cut(s) 1175
HaeIII GGCC 6 cut(s) 57, 63, 69, 93, 98, 280
HapII CCGG 5 cut(s) 197, 388, 394, 569, 1002
HgaI GACGC 3 cut(s) 255, 359, 561
HhaI GCGC 2 cut(s) 193, 1174
Hin1I GRCGYC 1 cut(s) 247
Hin1II CATG 9 cut(s) 206, 257, 470, 489, 680, 822, 1431, 1646, 1651
Hin6I GCGC 2 cut(s) 191, 1172
HinP1I GCGC 2 cut(s) 191, 1172
HincII GTYRAC 2 cut(s) 1705, 1785
HindII GTYRAC 2 cut(s) 1705, 1785
HindIII AAGCTT 1 cut(s) 1674
HinfI GANTC 9 cut(s) 456, 656, 1007, 1196, 1355, 1367, 1388, 1654, 1685
HpaII CCGG 5 cut(s) 197, 388, 394, 569, 1002
HphI GGTGA 6 cut(s) 474, 583, 629, 1232, 1649, 1663
Hpy166II GTNNAC 4 cut(s) 755, 1705, 1764, 1785
Hpy188III TCNNGA 9 cut(s) 236, 549, 671, 1043, 1268, 1505, 1643, 1729, 1823
Hpy8I GTNNAC 4 cut(s) 755, 1705, 1764, 1785
HpyAV CCTTC 6 cut(s) 117, 260, 404, 591, 656, 887
HpyCH4IV ACGT 3 cut(s) 524, 1072, 1500
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 197, 272
HpyF3I CTNAG 4 cut(s) 152, 672, 847, 947
HpySE526I ACGT 3 cut(s) 524, 1072, 1500
Hsp92I GRCGYC 1 cut(s) 247
Hsp92II CATG 9 cut(s) 206, 257, 470, 489, 680, 822, 1431, 1646, 1651
HspAI GCGC 2 cut(s) 191, 1172
KflI GGGWCCC 1 cut(s) 397
Ksp22I TGATCA 1 cut(s) 1639
Kzo9I GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
LguI GCTCTTC 1 cut(s) 1500
LmnI GCTCC 3 cut(s) 109, 317, 1825
Lsp1109I GCAGC 4 cut(s) 117, 476, 646, 913
LweI GCATC 5 cut(s) 395, 841, 1480, 1523, 1524
MaeI CTAG 3 cut(s) 140, 1352, 1578
MaeII ACGT 3 cut(s) 524, 1072, 1500
MalI GATC 6 cut(s) 150, 216, 1239, 1266, 1377, 1641
MbiI CCGCTC 2 cut(s) 104, 1363
MboI GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
MboII GAAGA 8 cut(s) 359, 1019, 1076, 1329, 1400, 1487, 1566, 1850
MflI RGATCY 2 cut(s) 148, 1237
MhlI GDGCHC 1 cut(s) 866
MlsI TGGCCA 1 cut(s) 93
MluCI AATT 5 cut(s) 447, 775, 941, 1141, 1210
MluNI TGGCCA 1 cut(s) 93
MlyI GAGTC 3 cut(s) 1205, 1382, 1694
MmeI TCCRAC 3 cut(s) 238, 589, 1694
Mox20I TGGCCA 1 cut(s) 93
MscI TGGCCA 1 cut(s) 93
MseI TTAA 1 cut(s) 521
MslI CAYNNNNRTG 1 cut(s) 817
Msp20I TGGCCA 1 cut(s) 93
MspA1I CMGCKG 2 cut(s) 130, 926
MspI CCGG 5 cut(s) 197, 388, 394, 569, 1002
MspR9I CCNGG 9 cut(s) 54, 60, 66, 95, 146, 395, 560, 711, 1116
Mva1269I GAATGC 1 cut(s) 1871
MvaI CCWGG 8 cut(s) 54, 60, 66, 95, 146, 560, 711, 1116
MwoI GCNNNNNNNGC 3 cut(s) 110, 197, 272
NciI CCSGG 1 cut(s) 395
NcoI CCATGG 1 cut(s) 1427
NdeI CATATG 1 cut(s) 877
NdeII GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
NlaIII CATG 9 cut(s) 206, 257, 470, 489, 680, 822, 1431, 1646, 1651
NlaIV GGNNCC 6 cut(s) 358, 392, 398, 399, 1239, 1320
NmuCI GTSAC 6 cut(s) 413, 480, 571, 617, 911, 1197
NspI RCATGY 1 cut(s) 206
PagI TCATGA 1 cut(s) 1642
PciSI GCTCTTC 1 cut(s) 1500
PctI GAATGC 1 cut(s) 1871
PfeI GAWTC 6 cut(s) 456, 656, 1007, 1355, 1367, 1654
PflMI CCANNNNNTGG 2 cut(s) 1315, 1428
PfoI TCCNGGA 1 cut(s) 1114
PkrI GCNGC 5 cut(s) 132, 282, 491, 636, 928
PleI GAGTC 3 cut(s) 1204, 1382, 1693
PpsI GAGTC 3 cut(s) 1204, 1382, 1693
PpuMI RGGWCCY 1 cut(s) 397
PshAI GACNNNNGTC 1 cut(s) 827
Psp1406I AACGTT 1 cut(s) 524
Psp5II RGGWCCY 1 cut(s) 397
Psp6I CCWGG 8 cut(s) 52, 58, 64, 93, 144, 558, 709, 1114
PspEI GGTNACC 1 cut(s) 571
PspGI CCWGG 8 cut(s) 52, 58, 64, 93, 144, 558, 709, 1114
PspN4I GGNNCC 6 cut(s) 358, 392, 398, 399, 1239, 1320
PspPI GGNCC 6 cut(s) 56, 62, 68, 397, 707, 752
PspPPI RGGWCCY 1 cut(s) 397
PstI CTGCAG 1 cut(s) 931
PsuI RGATCY 2 cut(s) 148, 1237
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 8 cut(s) 137, 477, 500, 1330, 1485, 1669, 1778, 1829
RsaNI GTAC 8 cut(s) 136, 476, 499, 1329, 1484, 1668, 1777, 1828
RseI CAYNNNNRTG 1 cut(s) 817
SapI GCTCTTC 1 cut(s) 1500
SaqAI TTAA 1 cut(s) 521
SatI GCNGC 5 cut(s) 131, 281, 490, 635, 927
Sau3AI GATC 6 cut(s) 148, 214, 1237, 1264, 1375, 1639
Sau96I GGNCC 6 cut(s) 56, 62, 68, 397, 707, 752
ScaI AGTACT 1 cut(s) 500
SchI GAGTC 3 cut(s) 1205, 1382, 1694
ScrFI CCNGG 9 cut(s) 54, 60, 66, 95, 146, 395, 560, 711, 1116
SduI GDGCHC 1 cut(s) 866
SfaNI GCATC 5 cut(s) 395, 841, 1480, 1523, 1524
SfcI CTRYAG 2 cut(s) 927, 1615
SinI GGWCC 3 cut(s) 397, 707, 752
SmiMI CAYNNNNRTG 1 cut(s) 817
Sse9I AATT 5 cut(s) 447, 775, 941, 1141, 1210
SsiI CCGC 5 cut(s) 102, 117, 128, 281, 1363
SspI AATATT 1 cut(s) 1314
SspMI CTAG 3 cut(s) 140, 1352, 1578
StyD4I CCNGG 9 cut(s) 52, 58, 64, 93, 144, 393, 558, 709, 1114
StyI CCWWGG 2 cut(s) 1093, 1427
TaiI ACGT 3 cut(s) 527, 1075, 1503
TaqI TCGA 5 cut(s) 217, 345, 590, 1134, 1435
TasI AATT 5 cut(s) 447, 775, 941, 1141, 1210
TatI WGTACW 4 cut(s) 498, 1328, 1483, 1827
TauI GCSGC 1 cut(s) 283
TfiI GAWTC 6 cut(s) 456, 656, 1007, 1355, 1367, 1654
Tru1I TTAA 1 cut(s) 521
Tru9I TTAA 1 cut(s) 521
TscAI CASTG 3 cut(s) 706, 871, 1639
TseFI GTSAC 6 cut(s) 413, 480, 571, 617, 911, 1197
TseI GCWGC 4 cut(s) 130, 489, 634, 926
Tsp45I GTSAC 6 cut(s) 413, 480, 571, 617, 911, 1197
TspDTI ATGAA 9 cut(s) 242, 521, 640, 756, 954, 1077, 1100, 1200, 1545
TspRI CASTG 3 cut(s) 706, 871, 1639
Van91I CCANNNNNTGG 2 cut(s) 1315, 1428
VpaK11BI GGWCC 3 cut(s) 397, 707, 752
XagI CCTNNNNNAGG 1 cut(s) 240
XapI RAATTY 3 cut(s) 447, 775, 941
XceI RCATGY 1 cut(s) 206
XmiI GTMKAC 1 cut(s) 1763
XspI CTAG 3 cut(s) 140, 1352, 1578
ZrmI AGTACT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.