RLG00000001434

Serine carboxypeptidase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
15576939 .. 15581118
4180 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001434

Sequence Viewer

Length: 585 bp
ATGGATTCCATGGGACATGCATTCGCGCCCACAGTTGTGCTCTCGTCTGCAGGCAGGAGGGTTTCTCTGGTGGCAGATGCCGCGGCTTCCGGCGCCGATGCTTTTGCACTCGAAGATGTTGAACATGGATCCATCCATCTTCTTGCACATGTTGGCTGTCAATCTGCAGAGGAAGATCCTAGATTGAAGGTTTTCAAGAATGAGTGGTTTGAAGGCAAGGACTGTCTTGACATTGGCTACAATTTTGGGATCATCACTATACAAATCGGAGTTTACGGTTGTGATATTGGCAACAAGAGGGAGAGTGGGTGCTTAAGGGTGGCCAACATAATGTTTATAGATGCACCAGTTGGTGCTGGGTTTTCATACTCTACAACCTCGAAAGGGTACTATACTTCCGATACAAAATCAGCTGCACAGACCTATACTTTCTTAAGAAAGTGGTTATATGCACACCCAAGGTTTCAGGGAAATCAACTGTACATTGGTGGTGACTCATATTCAGGACTTATTGTTCCCATTCTTCTTAAGAATATACTAGAAGGTTTAGAGTCTGGCCAAGGCCAAGAATGCAACTCCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

195

Amino Acids

20.96

Weight (kDa)

5.49

Isoelectric Point (pI)

34.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 106 - 192 4.6e-27 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 92
AccII CGCG 2 cut(s) 26, 83
AciI CCGC 2 cut(s) 81, 83
AclWI GGATC 4 cut(s) 123, 136, 170, 257
AcoI YGGCCR 2 cut(s) 321, 556
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 2 cut(s) 389, 482
AfiI CCNNNNNNNGG 1 cut(s) 384
AflII CTTAAG 3 cut(s) 313, 433, 527
AflIII ACRYGT 1 cut(s) 148
AgsI TTSAA 4 cut(s) 122, 187, 196, 212
AleI CACNNNNGTG 1 cut(s) 35
AloI GAACNNNNNNTCC 2 cut(s) 498, 530
AluBI AGCT 1 cut(s) 413
AluI AGCT 1 cut(s) 413
Alw21I GWGCWC 1 cut(s) 42
AlwI GGATC 4 cut(s) 123, 136, 170, 257
AoxI GGCC 3 cut(s) 321, 556, 562
ApeKI GCWGC 1 cut(s) 413
Asp700I GAANNNNTTC 1 cut(s) 191
AspLEI GCGC 2 cut(s) 28, 95
AsuHPI GGTGA 1 cut(s) 503
BalI TGGCCA 2 cut(s) 323, 558
BamHI GGATCC 1 cut(s) 128
BanI GGYRCC 1 cut(s) 92
Bbv12I GWGCWC 1 cut(s) 42
BbvI GCAGC 1 cut(s) 400
BccI CCATC 2 cut(s) 140, 144
BcgI CGANNNNNNTGC 2 cut(s) 86, 120
BfaI CTAG 2 cut(s) 180, 539
BfmI CTRYAG 2 cut(s) 48, 165
BfoI RGCGCY 1 cut(s) 96
BfrI CTTAAG 3 cut(s) 313, 433, 527
BisI GCNGC 3 cut(s) 81, 84, 414
BlsI GCNGC 3 cut(s) 82, 85, 415
BmiI GGNNCC 2 cut(s) 94, 130
BmsI GCATC 3 cut(s) 67, 88, 331
BplI GAGNNNNNCTC 2 cut(s) 49, 81
BsaHI GRCGYC 1 cut(s) 93
BsaJI CCNNGG 4 cut(s) 9, 81, 458, 559
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 1 cut(s) 384
Bse1I ACTGG 1 cut(s) 347
BseDI CCNNGG 4 cut(s) 9, 81, 458, 559
BseGI GGATG 1 cut(s) 132
BseLI CCNNNNNNNGG 1 cut(s) 384
BseNI ACTGG 1 cut(s) 347
BseXI GCAGC 1 cut(s) 400
BseYI CCCAGC 1 cut(s) 356
BsgI GTGCAG 1 cut(s) 399
Bsh1236I CGCG 2 cut(s) 26, 83
BshFI GGCC 3 cut(s) 323, 558, 564
BshNI GGYRCC 1 cut(s) 92
BsiHKAI GWGCWC 1 cut(s) 42
BsiSI CCGG 1 cut(s) 90
BslFI GGGAC 1 cut(s) 27
BslI CCNNNNNNNGG 1 cut(s) 384
BsmFI GGGAC 1 cut(s) 27
BsmI GAATGC 2 cut(s) 20, 575
BsnI GGCC 3 cut(s) 323, 558, 564
Bsp1286I GDGCHC 1 cut(s) 42
Bsp1407I TGTACA 1 cut(s) 480
Bsp143I GATC 3 cut(s) 128, 175, 249
Bsp19I CCATGG 1 cut(s) 9
BspACI CCGC 2 cut(s) 81, 83
BspANI GGCC 3 cut(s) 323, 558, 564
BspFNI CGCG 2 cut(s) 26, 83
BspLI GGNNCC 2 cut(s) 94, 130
BspMAI CTGCAG 2 cut(s) 52, 169
BspPI GGATC 4 cut(s) 123, 136, 170, 257
BspT107I GGYRCC 1 cut(s) 92
BspTI CTTAAG 3 cut(s) 313, 433, 527
BsrGI TGTACA 1 cut(s) 480
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 4 cut(s) 9, 81, 458, 559
BssMI GATC 3 cut(s) 128, 175, 249
BssNI GRCGYC 1 cut(s) 93
BssT1I CCWWGG 3 cut(s) 9, 458, 559
Bst4CI ACNGT 4 cut(s) 34, 224, 278, 480
BstACI GRCGYC 1 cut(s) 93
BstAFI CTTAAG 3 cut(s) 313, 433, 527
BstAUI TGTACA 1 cut(s) 480
BstC8I GCNNGC 1 cut(s) 52
BstDSI CCRYGG 2 cut(s) 9, 81
BstF5I GGATG 1 cut(s) 132
BstFNI CGCG 2 cut(s) 26, 83
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 2 cut(s) 28, 95
BstKTI GATC 3 cut(s) 131, 178, 252
BstMBI GATC 3 cut(s) 128, 175, 249
BstMWI GCNNNNNNNGC 3 cut(s) 80, 92, 570
BstNSI RCATGY 2 cut(s) 20, 152
BstSFI CTRYAG 2 cut(s) 48, 165
BstUI CGCG 2 cut(s) 26, 83
BstV1I GCAGC 1 cut(s) 400
BstX2I RGATCY 2 cut(s) 128, 175
BstYI RGATCY 2 cut(s) 128, 175
BsuRI GGCC 3 cut(s) 323, 558, 564
BtgI CCRYGG 2 cut(s) 9, 81
BtsCI GGATG 1 cut(s) 132
Cac8I GCNNGC 1 cut(s) 52
CfoI GCGC 2 cut(s) 28, 95
Cfr42I CCGCGG 1 cut(s) 84
Csp6I GTAC 2 cut(s) 388, 481
CviAII CATG 4 cut(s) 10, 17, 125, 149
CviJI RGCY 7 cut(s) 86, 156, 237, 323, 413, 558, 564
CviKI_1 RGCY 7 cut(s) 86, 156, 237, 323, 413, 558, 564
CviQI GTAC 2 cut(s) 388, 481
DinI GGCGCC 1 cut(s) 94
DpnI GATC 3 cut(s) 130, 177, 251
DpnII GATC 3 cut(s) 128, 175, 249
EaeI YGGCCR 2 cut(s) 321, 556
Eco130I CCWWGG 3 cut(s) 9, 458, 559
EcoT14I CCWWGG 3 cut(s) 9, 458, 559
EcoT22I ATGCAT 1 cut(s) 22
EgeI GGCGCC 1 cut(s) 94
EheI GGCGCC 1 cut(s) 94
ErhI CCWWGG 3 cut(s) 9, 458, 559
FaeI CATG 4 cut(s) 13, 20, 128, 152
FaqI GGGAC 1 cut(s) 27
FatI CATG 4 cut(s) 9, 16, 124, 148
Fnu4HI GCNGC 3 cut(s) 81, 84, 414
FokI GGATG 1 cut(s) 119
Fsp4HI GCNGC 3 cut(s) 81, 84, 414
FspBI CTAG 2 cut(s) 180, 539
GlaI GCGC 2 cut(s) 27, 94
GluI GCNGC 3 cut(s) 81, 84, 414
GsaI CCCAGC 1 cut(s) 360
HaeII RGCGCY 1 cut(s) 96
HaeIII GGCC 3 cut(s) 323, 558, 564
HapII CCGG 1 cut(s) 90
HhaI GCGC 2 cut(s) 28, 95
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 4 cut(s) 13, 20, 128, 152
Hin6I GCGC 2 cut(s) 26, 93
HinP1I GCGC 2 cut(s) 26, 93
HinfI GANTC 3 cut(s) 5, 494, 551
HpaII CCGG 1 cut(s) 90
HphI GGTGA 1 cut(s) 503
Hpy166II GTNNAC 1 cut(s) 274
Hpy188I TCNGA 2 cut(s) 269, 400
Hpy188III TCNNGA 3 cut(s) 196, 227, 504
Hpy8I GTNNAC 1 cut(s) 274
HpyAV CCTTC 3 cut(s) 181, 206, 536
HpyCH4III ACNGT 4 cut(s) 34, 224, 278, 480
HpyCH4V TGCA 9 cut(s) 20, 50, 107, 146, 167, 344, 416, 452, 573
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 92, 570
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 4 cut(s) 13, 20, 128, 152
HspAI GCGC 2 cut(s) 26, 93
KasI GGCGCC 1 cut(s) 92
KspI CCGCGG 1 cut(s) 84
Kzo9I GATC 3 cut(s) 128, 175, 249
LpnPI CCDG 9 cut(s) 36, 40, 53, 103, 342, 360, 452, 489, 540
Lsp1109I GCAGC 1 cut(s) 400
LweI GCATC 3 cut(s) 67, 88, 331
MaeI CTAG 2 cut(s) 180, 539
MaeIII GTNAC 1 cut(s) 491
MalI GATC 3 cut(s) 130, 177, 251
MboI GATC 3 cut(s) 128, 175, 249
MboII GAAGA 4 cut(s) 125, 131, 185, 515
MflI RGATCY 2 cut(s) 128, 175
MhlI GDGCHC 1 cut(s) 42
MlsI TGGCCA 2 cut(s) 323, 558
MluCI AATT 1 cut(s) 241
MluNI TGGCCA 2 cut(s) 323, 558
Mly113I GGCGCC 1 cut(s) 93
MlyI GAGTC 2 cut(s) 488, 560
MnlI CCTC 4 cut(s) 51, 163, 291, 388
Mox20I TGGCCA 2 cut(s) 323, 558
Mph1103I ATGCAT 1 cut(s) 22
MroXI GAANNNNTTC 1 cut(s) 191
MscI TGGCCA 2 cut(s) 323, 558
MseI TTAA 3 cut(s) 314, 434, 528
MslI CAYNNNNRTG 1 cut(s) 35
Msp20I TGGCCA 2 cut(s) 323, 558
MspA1I CMGCKG 2 cut(s) 83, 413
MspCI CTTAAG 3 cut(s) 313, 433, 527
MspI CCGG 1 cut(s) 90
Mva1269I GAATGC 2 cut(s) 20, 575
MvnI CGCG 2 cut(s) 26, 83
MwoI GCNNNNNNNGC 3 cut(s) 80, 92, 570
NarI GGCGCC 1 cut(s) 93
NcoI CCATGG 1 cut(s) 9
NdeII GATC 3 cut(s) 128, 175, 249
NlaIII CATG 4 cut(s) 13, 20, 128, 152
NlaIV GGNNCC 2 cut(s) 94, 130
NmuCI GTSAC 1 cut(s) 491
NsiI ATGCAT 1 cut(s) 22
NspI RCATGY 2 cut(s) 20, 152
OliI CACNNNNGTG 1 cut(s) 35
PciI ACATGT 1 cut(s) 148
PctI GAATGC 2 cut(s) 20, 575
PdmI GAANNNNTTC 1 cut(s) 191
PfeI GAWTC 1 cut(s) 5
PkrI GCNGC 3 cut(s) 82, 85, 415
PleI GAGTC 2 cut(s) 488, 559
PluTI GGCGCC 1 cut(s) 96
PpsI GAGTC 2 cut(s) 488, 559
PscI ACATGT 1 cut(s) 148
PspFI CCCAGC 1 cut(s) 356
PspN4I GGNNCC 2 cut(s) 94, 130
PstI CTGCAG 2 cut(s) 52, 169
PsuI RGATCY 2 cut(s) 128, 175
PvuII CAGCTG 1 cut(s) 413
RsaI GTAC 2 cut(s) 389, 482
RsaNI GTAC 2 cut(s) 388, 481
RseI CAYNNNNRTG 1 cut(s) 35
SacII CCGCGG 1 cut(s) 84
SaqAI TTAA 3 cut(s) 314, 434, 528
SatI GCNGC 3 cut(s) 81, 84, 414
Sau3AI GATC 3 cut(s) 128, 175, 249
SchI GAGTC 2 cut(s) 488, 560
SduI GDGCHC 1 cut(s) 42
SetI ASST 6 cut(s) 192, 380, 415, 425, 464, 547
SfaNI GCATC 3 cut(s) 67, 88, 331
SfcI CTRYAG 2 cut(s) 48, 165
SfoI GGCGCC 1 cut(s) 94
Sfr303I CCGCGG 1 cut(s) 84
SgrBI CCGCGG 1 cut(s) 84
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 3 cut(s) 313, 433, 527
SmoI CTYRAG 3 cut(s) 313, 433, 527
Sse9I AATT 1 cut(s) 241
SsiI CCGC 2 cut(s) 81, 83
SspDI GGCGCC 1 cut(s) 92
SspMI CTAG 2 cut(s) 180, 539
StyI CCWWGG 3 cut(s) 9, 458, 559
TaaI ACNGT 4 cut(s) 34, 224, 278, 480
TaqI TCGA 2 cut(s) 111, 380
TasI AATT 1 cut(s) 241
TatI WGTACW 1 cut(s) 480
TauI GCSGC 2 cut(s) 83, 86
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 3 cut(s) 314, 434, 528
Tru9I TTAA 3 cut(s) 314, 434, 528
TseFI GTSAC 1 cut(s) 491
TseI GCWGC 1 cut(s) 413
Tsp45I GTSAC 1 cut(s) 491
TspDTI ATGAA 1 cut(s) 354
Vha464I CTTAAG 3 cut(s) 313, 433, 527
XceI RCATGY 2 cut(s) 20, 152
XmnI GAANNNNTTC 1 cut(s) 191
XspI CTAG 2 cut(s) 180, 539
Zsp2I ATGCAT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.