Rorug05G0033600

Serine carboxypeptidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
2204624 .. 2207589
2966 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0033600.1

Sequence Viewer

Length: 1995 bp
ATGATTATTGTACTGCAAAAATTTGCCAGACAAAACATGGTTCATTTCCCTAGTGTCATGAAAACCATTCCGGTGCTTTTGCTTTGTTCTTTCATGACTCTCCTTTTTGAGCTTGCTTGTGCTGCACCACCTTATGATGTCCCTCCTTATAATATATGCTCAGTTGTTACTAGCAACTCTACAGGCCACAGTACGTTTCAAGAAAACCTTGAGAGTTTACTTAATTTATTACCTTCCAACGCTTCTGTTTCCAAGTTGTACAATGGTTCAATTGGAAATGAGCCAGATAGAGTTTACGCTCTCTATATGTGCCTCGACTTTGTTTCAAACGATACATGTCACAAGTGCATAGACGCAGCACGATCAAACATTATGAATCTCTGTCCTAAGTCAAAAGAAGCAATTGTATGGGAGGAATGGTGCCAGCTGCGCTACTCCAATGAGAATTTCTTTGGCAGATTAAATGTATCGGACAACAATGTTCTTCAAGTCAATCCACAGAATATTTCAGAGCAGCCAGAAAAGTTTAAGTCTGTTGTGAATCAAAAGCTGGGTGAACTCGCTAAGAAAGCGGCTTATAATGATTCTTTACCTAAGATGTATGCTACTGGAGAAGCGCACTTTGGAGATGAAGTGATACATGCTCTTGTGCAGTGTACTACCGATTTATCTGAAGGTGACTGTGACAAATGCCTTCAGAGAGCCACAGAAGACGTTTTAAGAGAATATTTCTTTGCCATGGGTGCAAGACTTTTCAGTCGTAGTTGTTTTCTGAGGTATGAGATATACTCATTCTACGATAATCCGACACAAGCTTCTAAGGGTGGAAGGAAGGTTAGGTTGATAATAATCCTGGTGAGCCTATCAGCATGCCTGGCGGTAGTACTTTTTGGTTTCTATATATTTCTTGCAATGAAAAGGAGAAATAGAAAAGACAATAGTGTAATTTTAGGTTTACCTACACTAGTCCATGAAAACCAATTAATAGGAAGGAACAACCTCAAAGCTCAGGAGTACCCCAATATCAGCTTTGCATCTATACGAGCAGCTACTTCCAACTTCTCTGAGTCGAATAAACTTGGGGAAGGTGGTTTTGGTCCTGTTTACAAGGGTATCATGAGTGATGGAAAGGAAGTGGCGATAAAGAGGCTTTCATTCTGTTCCGAGCAAGGTTCAGAGGAATTCACAACTGAGGTTCAACTGATAATGAATCTTCAACATAAAAATCTTGTCAGGCTTTTGGGTTATTGTGTAGATGGAGAGGAAAAGCTTCTTGTATATGAATACATGCCAAATAGCAGCCTAGATGTCATTCTTTTTGATTCAATGAAACGTGCACAACTTGATTGGACCAGACGTATAAACATTATTACTGGAATTGCAAGGGGAATTCTCTATTTGCACGAGGACTCTCGACTTAGAATCATCCACAGAGACTTGAAAGCTAGCAATGTATTACTGGACAATGAGATGAACCCAAAGATCTCAGATTTTGGCATGGCCAGGATCTTTGCAGGAAGTGAAGGACAAGCTAATACTGCTATAATAGTTGGGACTTATGGATACATGGCTCCTGAATATGCAATGGAGGGATTATATTCTTTCAAGTCTGATGTCTTTAGCTTTGGAGTAGTCCTTCTTGAGATAATAACTGGGAGAAAGAACGCCAAGCATGCTAGCCTCCCATCATATGCATGGAAATTATGGAACGAAGGAAAAGGACTGGAGCTAATTGATCCATTTCTGGTTGGTTCCTGTGATTCAGACGAGTTTTTGAGATATCTCCATATTGGATTATTGTGTGTTCAAGAAGATGCATATGACAGGCCAACCATGTCTTCTGCCGTTTTAATGTTGAAAAGTGAAACTGTAAATCTCAGCCAACCTGGAAAACCTGCCTTCTCCATTGGAACATTCAGTGATGTCCGCAATAAGGCTGGTGCTGTTAGCAGCTCTTATAATGGACTAACAATTTCCAACATAGCGCCACGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

664

Amino Acids

74.32

Weight (kDa)

6.45

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 53 - 148 1e-20 Salt stress response/antifungal
Stress-antifung PF01657 168 - 262 5.7e-11 Salt stress response/antifungal
Pkinase PF00069 355 - 558 4.8e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 357 - 576 4.6e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 150, 579, 1959
AasI GACNNNNNNGTC 1 cut(s) 756
Acc36I ACCTGC 1 cut(s) 1903
AccB1I GGYRCC 1 cut(s) 420
AciI CCGC 3 cut(s) 572, 878, 1927
AclWI GGATC 2 cut(s) 1514, 1730
AcoI YGGCCR 1 cut(s) 1500
AcsI RAATTY 4 cut(s) 20, 445, 1181, 1389
AcuI CTGAAG 2 cut(s) 680, 693
AfaI GTAC 6 cut(s) 12, 193, 260, 658, 885, 1016
AfiI CCNNNNNNNGG 1 cut(s) 1933
AflIII ACRYGT 1 cut(s) 335
AhlI ACTAGT 1 cut(s) 964
AjnI CCWGG 4 cut(s) 852, 873, 1502, 1885
AjuI GAANNNNNNNTTGG 8 cut(s) 431, 463, 606, 638, 1077, 1109, 1822, 1854
Alw21I GWGCWC 1 cut(s) 1339
Alw26I GTCTC 1 cut(s) 1428
Alw44I GTGCAC 1 cut(s) 1335
AlwI GGATC 2 cut(s) 1514, 1730
AoxI GGCC 3 cut(s) 184, 1500, 1826
ApaLI GTGCAC 1 cut(s) 1335
ApeKI GCWGC 7 cut(s) 122, 356, 427, 514, 1046, 1299, 1950
ApoI RAATTY 4 cut(s) 20, 445, 1181, 1389
AseI ATTAAT 1 cut(s) 983
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 3 cut(s) 432, 619, 1987
AspS9I GGNCC 2 cut(s) 1097, 1350
AsuHPI GGTGA 3 cut(s) 566, 689, 868
AsuNHI GCTAGC 2 cut(s) 1445, 1676
AvaII GGWCC 2 cut(s) 1097, 1350
BaeGI GKGCMC 1 cut(s) 1339
BaeI ACNNNNGTAYC 2 cut(s) 1096, 1129
BalI TGGCCA 1 cut(s) 1502
BanI GGYRCC 1 cut(s) 420
BauI CACGAG 1 cut(s) 1403
BbsI GAAGAC 2 cut(s) 717, 1830
Bbv12I GWGCWC 1 cut(s) 1339
BbvI GCAGC 7 cut(s) 109, 368, 414, 526, 1058, 1311, 1962
BccI CCATC 3 cut(s) 1118, 1250, 1693
BceAI ACGGC 1 cut(s) 1829
BciT130I CCWGG 4 cut(s) 854, 875, 1504, 1887
BciVI GTATCC 1 cut(s) 1556
BcoDI GTCTC 1 cut(s) 1428
BcuI ACTAGT 1 cut(s) 964
BfaI CTAG 6 cut(s) 51, 171, 965, 1304, 1446, 1677
BfmI CTRYAG 1 cut(s) 180
BfoI RGCGCY 1 cut(s) 1988
BfuAI ACCTGC 1 cut(s) 1903
BfuI GTATCC 1 cut(s) 1556
BglII AGATCT 1 cut(s) 1482
BisI GCNGC 8 cut(s) 123, 357, 428, 515, 573, 1047, 1300, 1951
BlsI GCNGC 8 cut(s) 124, 358, 429, 516, 574, 1048, 1301, 1952
BmcAI AGTACT 1 cut(s) 885
Bme1390I CCNGG 4 cut(s) 854, 875, 1504, 1887
Bme18I GGWCC 2 cut(s) 1097, 1350
BmgT120I GGNCC 2 cut(s) 1097, 1350
BmiI GGNNCC 3 cut(s) 422, 1572, 1753
BmrFI CCNGG 4 cut(s) 854, 875, 1504, 1887
BmrI ACTGGG 1 cut(s) 1662
BmsI GCATC 2 cut(s) 1043, 1804
BmtI GCTAGC 2 cut(s) 1449, 1680
BmuI ACTGGG 1 cut(s) 1662
BpiI GAAGAC 2 cut(s) 717, 1830
BplI GAGNNNNNCTC 2 cut(s) 773, 805
BpmI CTGGAG 2 cut(s) 630, 1745
Bpu10I CCTNAGC 1 cut(s) 1008
BpuEI CTTGAG 2 cut(s) 230, 1661
BsaBI GATNNNNATC 1 cut(s) 848
BsaJI CCNNGG 2 cut(s) 738, 1988
BsaWI WCCGGW 1 cut(s) 70
BsaXI ACNNNNNCTCC 4 cut(s) 404, 434, 618, 648
Bsc4I CCNNNNNNNGG 1 cut(s) 1933
Bse1I ACTGG 5 cut(s) 613, 1378, 1464, 1657, 1728
Bse3DI GCAATG 3 cut(s) 918, 1456, 1590
Bse8I GATNNNNATC 1 cut(s) 848
BseBI CCWGG 4 cut(s) 854, 875, 1504, 1887
BseDI CCNNGG 2 cut(s) 738, 1988
BseGI GGATG 1 cut(s) 1425
BseJI GATNNNNATC 1 cut(s) 848
BseLI CCNNNNNNNGG 1 cut(s) 1933
BseMI GCAATG 3 cut(s) 918, 1456, 1590
BseMII CTCAG 7 cut(s) 174, 764, 1022, 1056, 1182, 1500, 1891
BseNI ACTGG 5 cut(s) 613, 1378, 1464, 1657, 1728
BseSI GKGCMC 1 cut(s) 1339
BseXI GCAGC 7 cut(s) 109, 368, 414, 526, 1058, 1311, 1962
BseYI CCCAGC 1 cut(s) 550
BsgI GTGCAG 2 cut(s) 108, 671
BshFI GGCC 3 cut(s) 186, 1502, 1828
BshNI GGYRCC 1 cut(s) 420
BsiHKAI GWGCWC 1 cut(s) 1339
BsiSI CCGG 1 cut(s) 71
BslFI GGGAC 2 cut(s) 125, 1567
BslI CCNNNNNNNGG 1 cut(s) 1933
BsmAI GTCTC 1 cut(s) 1428
BsmFI GGGAC 2 cut(s) 125, 1567
BsnI GGCC 3 cut(s) 186, 1502, 1828
Bsp1286I GDGCHC 1 cut(s) 1339
Bsp1407I TGTACA 1 cut(s) 258
Bsp143I GATC 4 cut(s) 362, 1482, 1506, 1735
Bsp19I CCATGG 1 cut(s) 738
BspACI CCGC 3 cut(s) 572, 878, 1927
BspANI GGCC 3 cut(s) 186, 1502, 1828
BspCNI CTCAG 7 cut(s) 173, 765, 1021, 1057, 1183, 1499, 1890
BspHI TCATGA 3 cut(s) 57, 93, 1116
BspLI GGNNCC 3 cut(s) 422, 1572, 1753
BspMI ACCTGC 1 cut(s) 1903
BspOI GCTAGC 2 cut(s) 1449, 1680
BspPI GGATC 2 cut(s) 1514, 1730
BspT107I GGYRCC 1 cut(s) 420
BsrDI GCAATG 3 cut(s) 918, 1456, 1590
BsrGI TGTACA 1 cut(s) 258
BsrI ACTGG 5 cut(s) 613, 1378, 1464, 1657, 1728
BssECI CCNNGG 2 cut(s) 738, 1988
BssMI GATC 4 cut(s) 362, 1482, 1506, 1735
BssSI CACGAG 1 cut(s) 1403
BssT1I CCWWGG 1 cut(s) 738
Bst2BI CACGAG 1 cut(s) 1403
Bst2UI CCWGG 4 cut(s) 854, 875, 1504, 1887
Bst4CI ACNGT 4 cut(s) 191, 683, 1870, 1992
BstAUI TGTACA 1 cut(s) 258
BstC8I GCNNGC 6 cut(s) 114, 425, 871, 1447, 1674, 1678
BstDSI CCRYGG 2 cut(s) 738, 1988
BstF5I GGATG 1 cut(s) 1425
BstH2I RGCGCY 1 cut(s) 1988
BstHHI GCGC 3 cut(s) 432, 619, 1987
BstKTI GATC 4 cut(s) 365, 1485, 1509, 1738
BstMAI GTCTC 1 cut(s) 1428
BstMBI GATC 4 cut(s) 362, 1482, 1506, 1735
BstMWI GCNNNNNNNGC 7 cut(s) 122, 429, 569, 743, 875, 1538, 1673
BstNI CCWGG 4 cut(s) 854, 875, 1504, 1887
BstNSI RCATGY 5 cut(s) 339, 644, 873, 1291, 1676
BstSCI CCNGG 4 cut(s) 852, 873, 1502, 1885
BstSFI CTRYAG 1 cut(s) 180
BstSLI GKGCMC 1 cut(s) 1339
BstV1I GCAGC 7 cut(s) 109, 368, 414, 526, 1058, 1311, 1962
BstV2I GAAGAC 2 cut(s) 717, 1830
BstX2I RGATCY 2 cut(s) 1482, 1506
BstYI RGATCY 2 cut(s) 1482, 1506
BsuI GTATCC 1 cut(s) 1556
BsuRI GGCC 3 cut(s) 186, 1502, 1828
BtgI CCRYGG 2 cut(s) 738, 1988
BtsCI GGATG 1 cut(s) 1425
BtsI GCAGTG 1 cut(s) 659
BtsIMutI CAGTG 2 cut(s) 659, 1924
BveI ACCTGC 1 cut(s) 1903
Cac8I GCNNGC 6 cut(s) 114, 425, 871, 1447, 1674, 1678
CciI TCATGA 3 cut(s) 57, 93, 1116
CfoI GCGC 3 cut(s) 432, 619, 1987
Cfr13I GGNCC 2 cut(s) 1097, 1350
CseI GACGC 1 cut(s) 362
Csp6I GTAC 6 cut(s) 11, 192, 259, 657, 884, 1015
CviQI GTAC 6 cut(s) 11, 192, 259, 657, 884, 1015
DpnI GATC 4 cut(s) 364, 1484, 1508, 1737
DpnII GATC 4 cut(s) 362, 1482, 1506, 1735
DrdI GACNNNNNNGTC 1 cut(s) 756
DseDI GACNNNNNNGTC 1 cut(s) 756
EaeI YGGCCR 1 cut(s) 1500
Eco130I CCWWGG 1 cut(s) 738
Eco32I GATATC 1 cut(s) 1781
Eco47I GGWCC 2 cut(s) 1097, 1350
Eco57I CTGAAG 2 cut(s) 680, 693
EcoRI GAATTC 2 cut(s) 1181, 1389
EcoRII CCWGG 4 cut(s) 852, 873, 1502, 1885
EcoRV GATATC 1 cut(s) 1781
EcoT14I CCWWGG 1 cut(s) 738
EcoT22I ATGCAT 2 cut(s) 1696, 1819
ErhI CCWWGG 1 cut(s) 738
FalI AAGNNNNNCTT 2 cut(s) 192, 224
FaqI GGGAC 2 cut(s) 125, 1567
FauNDI CATATG 2 cut(s) 1690, 1819
Fnu4HI GCNGC 8 cut(s) 123, 357, 428, 515, 573, 1047, 1300, 1951
FokI GGATG 1 cut(s) 1412
Fsp4HI GCNGC 8 cut(s) 123, 357, 428, 515, 573, 1047, 1300, 1951
FspBI CTAG 6 cut(s) 51, 171, 965, 1304, 1446, 1677
GlaI GCGC 3 cut(s) 431, 618, 1986
GluI GCNGC 8 cut(s) 123, 357, 428, 515, 573, 1047, 1300, 1951
GsaI CCCAGC 1 cut(s) 554
GsuI CTGGAG 2 cut(s) 630, 1745
HaeII RGCGCY 1 cut(s) 1988
HaeIII GGCC 3 cut(s) 186, 1502, 1828
HapII CCGG 1 cut(s) 71
HgaI GACGC 1 cut(s) 362
HhaI GCGC 3 cut(s) 432, 619, 1987
Hin6I GCGC 3 cut(s) 430, 617, 1985
HinP1I GCGC 3 cut(s) 430, 617, 1985
HindIII AAGCTT 2 cut(s) 813, 1268
HpaII CCGG 1 cut(s) 71
HphI GGTGA 3 cut(s) 566, 689, 868
Hpy166II GTNNAC 7 cut(s) 218, 295, 557, 657, 956, 1105, 1337
Hpy188III TCNNGA 9 cut(s) 58, 94, 200, 1010, 1117, 1413, 1574, 1640, 1808
Hpy8I GTNNAC 7 cut(s) 218, 295, 557, 657, 956, 1105, 1337
HpyCH4III ACNGT 4 cut(s) 191, 683, 1870, 1992
HpyCH4IV ACGT 4 cut(s) 194, 714, 1333, 1357
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 429, 569, 743, 875, 1538, 1673
HpySE526I ACGT 4 cut(s) 194, 714, 1333, 1357
HspAI GCGC 3 cut(s) 430, 617, 1985
Kzo9I GATC 4 cut(s) 362, 1482, 1506, 1735
LmnI GCTCC 2 cut(s) 1576, 1726
Lsp1109I GCAGC 7 cut(s) 109, 368, 414, 526, 1058, 1311, 1962
LweI GCATC 2 cut(s) 1043, 1804
MaeI CTAG 6 cut(s) 51, 171, 965, 1304, 1446, 1677
MaeII ACGT 4 cut(s) 194, 714, 1333, 1357
MaeIII GTNAC 4 cut(s) 166, 338, 677, 683
MalI GATC 4 cut(s) 364, 1484, 1508, 1737
MboI GATC 4 cut(s) 362, 1482, 1506, 1735
MboII GAAGA 5 cut(s) 476, 722, 1205, 1823, 1830
MfeI CAATTG 2 cut(s) 270, 402
MflI RGATCY 2 cut(s) 1482, 1506
MhlI GDGCHC 1 cut(s) 1339
MlsI TGGCCA 1 cut(s) 1502
MluNI TGGCCA 1 cut(s) 1502
MlyI GAGTC 3 cut(s) 91, 1076, 1403
MmeI TCCRAC 3 cut(s) 261, 830, 1080
Mox20I TGGCCA 1 cut(s) 1502
Mph1103I ATGCAT 2 cut(s) 1696, 1819
MroXI GAANNNNTTC 1 cut(s) 1269
MscI TGGCCA 1 cut(s) 1502
MseI TTAA 6 cut(s) 222, 461, 528, 719, 983, 1850
MslI CAYNNNNRTG 2 cut(s) 71, 1693
Msp20I TGGCCA 1 cut(s) 1502
MspA1I CMGCKG 1 cut(s) 427
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 4 cut(s) 854, 875, 1504, 1887
MunI CAATTG 2 cut(s) 270, 402
MvaI CCWGG 4 cut(s) 854, 875, 1504, 1887
MwoI GCNNNNNNNGC 7 cut(s) 122, 429, 569, 743, 875, 1538, 1673
NcoI CCATGG 1 cut(s) 738
NdeI CATATG 2 cut(s) 1690, 1819
NdeII GATC 4 cut(s) 362, 1482, 1506, 1735
NheI GCTAGC 2 cut(s) 1445, 1676
NlaIV GGNNCC 3 cut(s) 422, 1572, 1753
NmuCI GTSAC 3 cut(s) 338, 677, 683
NsiI ATGCAT 2 cut(s) 1696, 1819
NspI RCATGY 5 cut(s) 339, 644, 873, 1291, 1676
PaeI GCATGC 2 cut(s) 873, 1676
PagI TCATGA 3 cut(s) 57, 93, 1116
PciI ACATGT 1 cut(s) 335
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 7 cut(s) 376, 541, 584, 1210, 1322, 1422, 1760
PkrI GCNGC 8 cut(s) 124, 358, 429, 516, 574, 1048, 1301, 1952
PleI GAGTC 3 cut(s) 91, 1075, 1403
PpsI GAGTC 3 cut(s) 91, 1075, 1403
PscI ACATGT 1 cut(s) 335
PshBI ATTAAT 1 cut(s) 983
PsiI TTATAA 3 cut(s) 150, 579, 1959
Psp6I CCWGG 4 cut(s) 852, 873, 1502, 1885
PspFI CCCAGC 1 cut(s) 550
PspGI CCWGG 4 cut(s) 852, 873, 1502, 1885
PspN4I GGNNCC 3 cut(s) 422, 1572, 1753
PspPI GGNCC 2 cut(s) 1097, 1350
PsuI RGATCY 2 cut(s) 1482, 1506
PvuII CAGCTG 1 cut(s) 427
RsaI GTAC 6 cut(s) 12, 193, 260, 658, 885, 1016
RsaNI GTAC 6 cut(s) 11, 192, 259, 657, 884, 1015
RseI CAYNNNNRTG 2 cut(s) 71, 1693
SaqAI TTAA 6 cut(s) 222, 461, 528, 719, 983, 1850
SatI GCNGC 8 cut(s) 123, 357, 428, 515, 573, 1047, 1300, 1951
Sau3AI GATC 4 cut(s) 362, 1482, 1506, 1735
Sau96I GGNCC 2 cut(s) 1097, 1350
ScaI AGTACT 1 cut(s) 885
SchI GAGTC 3 cut(s) 91, 1076, 1403
ScrFI CCNGG 4 cut(s) 854, 875, 1504, 1887
SduI GDGCHC 1 cut(s) 1339
SfaNI GCATC 2 cut(s) 1043, 1804
SfcI CTRYAG 1 cut(s) 180
SinI GGWCC 2 cut(s) 1097, 1350
SmiMI CAYNNNNRTG 2 cut(s) 71, 1693
SmlI CTYRAG 2 cut(s) 209, 1640
SmoI CTYRAG 2 cut(s) 209, 1640
SpeI ACTAGT 1 cut(s) 964
SphI GCATGC 2 cut(s) 873, 1676
SsiI CCGC 3 cut(s) 572, 878, 1927
SspI AATATT 2 cut(s) 505, 728
SspMI CTAG 6 cut(s) 51, 171, 965, 1304, 1446, 1677
StyD4I CCNGG 4 cut(s) 852, 873, 1502, 1885
StyI CCWWGG 1 cut(s) 738
TaaI ACNGT 4 cut(s) 191, 683, 1870, 1992
TaiI ACGT 4 cut(s) 197, 717, 1336, 1360
TaqI TCGA 3 cut(s) 315, 1070, 1414
TatI WGTACW 4 cut(s) 10, 258, 656, 883
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 7 cut(s) 376, 541, 584, 1210, 1322, 1422, 1760
Tru1I TTAA 6 cut(s) 222, 461, 528, 719, 983, 1850
Tru9I TTAA 6 cut(s) 222, 461, 528, 719, 983, 1850
TscAI CASTG 2 cut(s) 659, 1924
TseFI GTSAC 3 cut(s) 338, 677, 683
TseI GCWGC 7 cut(s) 122, 356, 427, 514, 1046, 1299, 1950
Tsp45I GTSAC 3 cut(s) 338, 677, 683
TspRI CASTG 2 cut(s) 659, 1924
VneI GTGCAC 1 cut(s) 1335
VpaK11BI GGWCC 2 cut(s) 1097, 1350
VspI ATTAAT 1 cut(s) 983
XapI RAATTY 4 cut(s) 20, 445, 1181, 1389
XceI RCATGY 5 cut(s) 339, 644, 873, 1291, 1676
XcmI CCANNNNNNNNNTGG 2 cut(s) 34, 1692
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 6 cut(s) 51, 171, 965, 1304, 1446, 1677
ZrmI AGTACT 1 cut(s) 885
Zsp2I ATGCAT 2 cut(s) 1696, 1819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.