Rmu_sc0007382.1_g000001

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007382.1
Physical Location & Seq
Reverse (-)
1 .. 1302
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007382.1_g000001.1.cds

Sequence Viewer

Length: 470 bp
atggatcaccccaagttcctcaaaaatgcactctatgttgccggagattcttattcgggcattgttcttcctattattgttcaggaaatatctgatggtaatgaagatggacgtcacccaccaatgaatatccaaggatatgtgcttggtaatccaggaacagacatagatgtcgatgagaattacagagtgccatttgctttcagaaaagcgcttatatcagatgaactatacaagtcactcaaaacaaattgtaagggtgagtatgtcaatgtggatccaaacaatgcgttatgtgtggatgatcttgaccaatacaatgagtgtatcgcagacatcaatacagcccaaatattggaaccttattgtactgtttcttctccaaatccactaggttcagagcgggattcagacaatctcaatcaagactctgtaaatcttctttctcttcctcaactttccaggccatg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

156

Amino Acids

17.28

Weight (kDa)

4.27

Isoelectric Point (pI)

30.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 170
AatII GACGTC 1 cut(s) 115
AccB7I CCANNNNNTGG 1 cut(s) 355
AccBSI CCGCTC 1 cut(s) 403
AciI CCGC 1 cut(s) 403
AclWI GGATC 3 cut(s) 12, 272, 285
AcyI GRCGYC 1 cut(s) 112
AfaI GTAC 1 cut(s) 370
AfeI AGCGCT 1 cut(s) 213
AfiI CCNNNNNNNGG 1 cut(s) 355
AjnI CCWGG 2 cut(s) 154, 461
AlwI GGATC 3 cut(s) 12, 272, 285
Aor51HI AGCGCT 1 cut(s) 213
AoxI GGCC 1 cut(s) 464
AspLEI GCGC 1 cut(s) 214
AsuHPI GGTGA 2 cut(s) 107, 272
BamHI GGATCC 1 cut(s) 277
BarI GAAGNNNNNNTAC 2 cut(s) 361, 393
BccI CCATC 2 cut(s) 89, 101
BciT130I CCWGG 2 cut(s) 156, 463
BfaI CTAG 1 cut(s) 392
BfoI RGCGCY 1 cut(s) 215
Bme1390I CCNGG 2 cut(s) 156, 463
BmiI GGNNCC 2 cut(s) 279, 360
BmrFI CCNGG 2 cut(s) 156, 463
BsaHI GRCGYC 1 cut(s) 112
BsaJI CCNNGG 1 cut(s) 133
Bsc4I CCNNNNNNNGG 1 cut(s) 355
BseBI CCWGG 2 cut(s) 156, 463
BseDI CCNNGG 1 cut(s) 133
BseGI GGATG 1 cut(s) 307
BseLI CCNNNNNNNGG 1 cut(s) 355
BshFI GGCC 1 cut(s) 466
BsiSI CCGG 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 355
BsnI GGCC 1 cut(s) 466
Bsp143I GATC 3 cut(s) 4, 277, 304
BspACI CCGC 1 cut(s) 403
BspANI GGCC 1 cut(s) 466
BspLI GGNNCC 2 cut(s) 279, 360
BspPI GGATC 3 cut(s) 12, 272, 285
BsrBI CCGCTC 1 cut(s) 403
BssECI CCNNGG 1 cut(s) 133
BssMI GATC 3 cut(s) 4, 277, 304
BssNI GRCGYC 1 cut(s) 112
BssT1I CCWWGG 1 cut(s) 133
Bst2UI CCWGG 2 cut(s) 156, 463
Bst4CI ACNGT 1 cut(s) 373
Bst6I CTCTTC 1 cut(s) 453
BstACI GRCGYC 1 cut(s) 112
BstF5I GGATG 1 cut(s) 307
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 3 cut(s) 7, 280, 307
BstMBI GATC 3 cut(s) 4, 277, 304
BstNI CCWGG 2 cut(s) 156, 463
BstSCI CCNGG 2 cut(s) 154, 461
BstX2I RGATCY 1 cut(s) 277
BstYI RGATCY 1 cut(s) 277
BsuRI GGCC 1 cut(s) 466
BtsCI GGATG 1 cut(s) 307
CfoI GCGC 1 cut(s) 214
Csp6I GTAC 1 cut(s) 369
CviAII CATG 1 cut(s) 468
CviJI RGCY 2 cut(s) 347, 466
CviKI_1 RGCY 2 cut(s) 347, 466
CviQI GTAC 1 cut(s) 369
DpnI GATC 3 cut(s) 6, 279, 306
DpnII GATC 3 cut(s) 4, 277, 304
DrdI GACNNNNNNGTC 1 cut(s) 170
DseDI GACNNNNNNGTC 1 cut(s) 170
Eam1104I CTCTTC 1 cut(s) 453
EarI CTCTTC 1 cut(s) 453
Eco130I CCWWGG 1 cut(s) 133
Eco47III AGCGCT 1 cut(s) 213
EcoRII CCWGG 2 cut(s) 154, 461
EcoT14I CCWWGG 1 cut(s) 133
ErhI CCWWGG 1 cut(s) 133
FaiI YATR 8 cut(s) 36, 141, 167, 218, 232, 267, 295, 469
FauI CCCGC 1 cut(s) 396
FokI GGATG 1 cut(s) 314
FspBI CTAG 1 cut(s) 392
GlaI GCGC 1 cut(s) 213
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 1 cut(s) 466
HapII CCGG 1 cut(s) 42
HhaI GCGC 1 cut(s) 214
Hin1I GRCGYC 1 cut(s) 112
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HinfI GANTC 3 cut(s) 47, 407, 428
HpaII CCGG 1 cut(s) 42
HphI GGTGA 2 cut(s) 107, 272
Hpy188I TCNGA 5 cut(s) 94, 206, 223, 400, 412
Hpy188III TCNNGA 3 cut(s) 83, 308, 425
HpyCH4III ACNGT 1 cut(s) 373
HpyCH4IV ACGT 1 cut(s) 112
HpyCH4V TGCA 1 cut(s) 29
HpySE526I ACGT 1 cut(s) 112
Hsp92I GRCGYC 1 cut(s) 112
HspAI GCGC 1 cut(s) 212
Kzo9I GATC 3 cut(s) 4, 277, 304
LpnPI CCDG 5 cut(s) 55, 68, 141, 168, 448
MaeI CTAG 1 cut(s) 392
MaeII ACGT 1 cut(s) 112
MaeIII GTNAC 2 cut(s) 113, 237
MalI GATC 3 cut(s) 6, 279, 306
MbiI CCGCTC 1 cut(s) 403
MboI GATC 3 cut(s) 4, 277, 304
MboII GAAGA 5 cut(s) 59, 116, 369, 431, 440
MflI RGATCY 1 cut(s) 277
MluCI AATT 2 cut(s) 181, 250
MlyI GAGTC 1 cut(s) 422
MnlI CCTC 2 cut(s) 29, 462
MspI CCGG 1 cut(s) 42
MspR9I CCNGG 2 cut(s) 156, 463
MvaI CCWGG 2 cut(s) 156, 463
NdeII GATC 3 cut(s) 4, 277, 304
NlaIV GGNNCC 2 cut(s) 279, 360
NmuCI GTSAC 2 cut(s) 113, 237
PfeI GAWTC 2 cut(s) 47, 407
PflMI CCANNNNNTGG 1 cut(s) 355
PfoI TCCNGGA 1 cut(s) 154
PleI GAGTC 1 cut(s) 422
PpsI GAGTC 1 cut(s) 422
Psp6I CCWGG 2 cut(s) 154, 461
PspGI CCWGG 2 cut(s) 154, 461
PspN4I GGNNCC 2 cut(s) 279, 360
PsuI RGATCY 1 cut(s) 277
RsaI GTAC 1 cut(s) 370
RsaNI GTAC 1 cut(s) 369
Sau3AI GATC 3 cut(s) 4, 277, 304
SchI GAGTC 1 cut(s) 422
ScrFI CCNGG 2 cut(s) 156, 463
SetI ASST 3 cut(s) 115, 364, 397
Sse9I AATT 2 cut(s) 181, 250
SsiI CCGC 1 cut(s) 403
SspI AATATT 1 cut(s) 354
SspMI CTAG 1 cut(s) 392
StyD4I CCNGG 2 cut(s) 154, 461
StyI CCWWGG 1 cut(s) 133
TaaI ACNGT 1 cut(s) 373
TaiI ACGT 1 cut(s) 115
TaqI TCGA 1 cut(s) 174
TasI AATT 2 cut(s) 181, 250
TatI WGTACW 1 cut(s) 368
TfiI GAWTC 2 cut(s) 47, 407
TseFI GTSAC 2 cut(s) 113, 237
Tsp45I GTSAC 2 cut(s) 113, 237
TspDTI ATGAA 3 cut(s) 117, 140, 240
Van91I CCANNNNNTGG 1 cut(s) 355
XspI CTAG 1 cut(s) 392
ZraI GACGTC 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.