Rw6G004730

Serine carboxypeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000102
Physical Location & Seq
Forward (+)
7766927 .. 7770448
3522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004730.1

Sequence Viewer

Length: 1410 bp
ATGATGAAGTGGATGTGCCTGAATTTACTTCTTGTGCTGGTTCTCTCCGGTGCCGCAATGTCGCAGAACATCACTACTACTCTGCCTGGTTACCCTGGTACACTCCCATTCAGTCTTGAAACTGGATATGTGGGTGTGGGAGATTTGGATGAATTGCAGTTCTTTTACTACTTCATCGAGTCACAGAGGAACCCTGTAAGGGACCCTCTCTTGCTTTGGCTTACCGGAGGCCCTGGTTGTTCGGGTTTCTCTGGCCTTGTCTATGAAATCGGTCCATTAACTTTCGATTATGTAGCCTTCAATGGTAGCTTTCCTACTTTCGTGGACAACCCGTTCTCATGGACCCAAATTGCCAGCATCATCTTTCTGGATGCACCAATTGGCACTGGTTTCTCCTACTCAACTACTCAGGAAGGTTACAATAGCAGTGACACTGAATCAGCAGAAGCTGTGTACCAATTTCTCCGGAAGTGGTTGATCAAACATCCCAAGTTTAGATACAATCCACTCTACATTGCTGGAGATTCATATTCAGGCATCATTGTTCCTCAAGTCACTCTTAAAGTATCAGATGGTAATCGTAATGGGATCAGGCCATCCATGAAGCTCCAGGGATATCTACTTGGAAATCCTGTAACAGAGTTACATAGCGATGAGAATTCAAGAATAGAATTTTACCACCGCGTCACACTAATATCCAGTGAACTTTATGCGTCTATCCGAGAAAGTTGCCAAGGGGAATATGTTAATCCAAATGTAAGCAGTTCAGATTGCATGGACGACATTGGACTTGTTGCAGAGTGCACTATACCAGTAGATGATGCAAACATTTTGCAACCAAAATGTTCCTGGGCATCTCCAAAATTAGCAGATGGATCAATAAAACGAGGGTTGAAATTTTTCGACGACATCCCAGATGAAATCATTCGATCACCAACTAAACGACAAGAACATTGGTGTCGTAATGATAATTATGTGCTCTCTTATATATGGGCGAATGATGCAACAGTCCAAGCAGCTCTCAGTATTCGAAACGGTACCATAACAGATTGGAAGAGGTGCAATAAGAGCTTGGCTTATGACTCTAATTTGTTGAGCGTGGTTGAGTACCATCGAGAACTCATAGGAAGAGGCTACCGATCTTTGATCTACAGCGGTGATCATGACGCGTTGATTCCATATGTCGGTACACTAACATGGATCAGATTTCTCAACTTGACTACTGCCGATGGATGGAGACCGTGGTATGTCAACGGAAATGTTGCAGGATTTACTGAGAAGTATACAAATGACGTGTCAGATGGATTGACCTTTGCAACTATAAAGGGAGCGGGTCACACAGCTCCAGAGTACATGCCTGAGCAAGCTCTTGATATGATGGATAGATGGTTGGCTCACTATCCTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

469

Amino Acids

52.68

Weight (kDa)

4.99

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 29 - 465 1.2e-120 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1037
AccB1I GGYRCC 2 cut(s) 50, 1037
AccBSI CCGCTC 1 cut(s) 1331
AccI GTMKAC 1 cut(s) 1283
AccII CGCG 2 cut(s) 684, 1169
AccIII TCCGGA 1 cut(s) 465
AciI CCGC 4 cut(s) 54, 682, 1155, 1331
AclWI GGATC 3 cut(s) 596, 883, 1208
AcsI RAATTY 4 cut(s) 22, 658, 671, 896
AfaI GTAC 6 cut(s) 100, 455, 1039, 1109, 1189, 1352
AfiI CCNNNNNNNGG 3 cut(s) 199, 1184, 1233
AflIII ACRYGT 2 cut(s) 1167, 1293
AgsI TTSAA 4 cut(s) 119, 301, 663, 895
AjiI CACGTC 1 cut(s) 1294
AjnI CCWGG 5 cut(s) 85, 94, 232, 609, 848
AloI GAACNNNNNNTCC 2 cut(s) 317, 349
AluBI AGCT 7 cut(s) 309, 449, 607, 1019, 1071, 1343, 1367
AluI AGCT 7 cut(s) 309, 449, 607, 1019, 1071, 1343, 1367
Alw21I GWGCWC 2 cut(s) 806, 981
Alw26I GTCTC 1 cut(s) 1231
Alw44I GTGCAC 1 cut(s) 802
AlwI GGATC 3 cut(s) 596, 883, 1208
AlwNI CAGNNNCTG 1 cut(s) 449
Aor13HI TCCGGA 1 cut(s) 465
AoxI GGCC 3 cut(s) 229, 253, 593
ApaLI GTGCAC 1 cut(s) 802
ApeKI GCWGC 1 cut(s) 1016
ApoI RAATTY 4 cut(s) 22, 658, 671, 896
ArsI GACNNNNNNTTYG 2 cut(s) 1280, 1312
Asp700I GAANNNNTTC 2 cut(s) 899, 924
Asp718I GGTACC 1 cut(s) 1037
AspS9I GGNCC 4 cut(s) 202, 230, 272, 342
AsuHPI GGTGA 2 cut(s) 924, 1169
AsuII TTCGAA 1 cut(s) 1030
AvaII GGWCC 3 cut(s) 202, 272, 342
BaeGI GKGCMC 1 cut(s) 806
BanI GGYRCC 2 cut(s) 50, 1037
Bbv12I GWGCWC 2 cut(s) 806, 981
BbvI GCAGC 1 cut(s) 1028
BccI CCATC 9 cut(s) 566, 604, 866, 1119, 1223, 1227, 1295, 1372, 1380
BcgI CGANNNNNNTGC 2 cut(s) 711, 745
BciT130I CCWGG 5 cut(s) 87, 96, 234, 611, 850
BclI TGATCA 2 cut(s) 477, 1159
BcoDI GTCTC 1 cut(s) 1231
BfmI CTRYAG 1 cut(s) 1150
BisI GCNGC 2 cut(s) 54, 1017
BlsI GCNGC 2 cut(s) 55, 1018
Bme1390I CCNGG 5 cut(s) 87, 96, 234, 611, 850
Bme18I GGWCC 3 cut(s) 202, 272, 342
BmgBI CACGTC 1 cut(s) 1294
BmgT120I GGNCC 4 cut(s) 202, 230, 272, 342
BmiI GGNNCC 6 cut(s) 52, 191, 203, 204, 344, 1039
BmrFI CCNGG 5 cut(s) 87, 96, 234, 611, 850
BmsI GCATC 6 cut(s) 361, 366, 546, 811, 863, 991
BpmI CTGGAG 3 cut(s) 540, 593, 1329
Bpu10I CCTNAGC 1 cut(s) 1359
Bpu14I TTCGAA 1 cut(s) 1030
BpuEI CTTGAG 1 cut(s) 534
BsaBI GATNNNNATC 1 cut(s) 576
BsaI GGTCTC 1 cut(s) 1231
BsaJI CCNNGG 6 cut(s) 94, 232, 610, 733, 849, 1241
BsaWI WCCGGW 3 cut(s) 47, 224, 465
Bsc4I CCNNNNNNNGG 3 cut(s) 199, 1184, 1233
Bse1I ACTGG 4 cut(s) 127, 391, 699, 812
Bse3DI GCAATG 2 cut(s) 63, 513
Bse8I GATNNNNATC 1 cut(s) 576
BseAI TCCGGA 1 cut(s) 465
BseBI CCWGG 5 cut(s) 87, 96, 234, 611, 850
BseDI CCNNGG 6 cut(s) 94, 232, 610, 733, 849, 1241
BseGI GGATG 7 cut(s) 18, 154, 376, 484, 596, 909, 1238
BseJI GATNNNNATC 1 cut(s) 576
BseLI CCNNNNNNNGG 3 cut(s) 199, 1184, 1233
BseMI GCAATG 2 cut(s) 63, 513
BseMII CTCAG 4 cut(s) 422, 1036, 1266, 1350
BseNI ACTGG 4 cut(s) 127, 391, 699, 812
BseSI GKGCMC 1 cut(s) 806
BseXI GCAGC 1 cut(s) 1028
Bsh1236I CGCG 2 cut(s) 684, 1169
BshFI GGCC 3 cut(s) 231, 255, 595
BshNI GGYRCC 2 cut(s) 50, 1037
BsiHKAI GWGCWC 2 cut(s) 806, 981
BsiSI CCGG 3 cut(s) 48, 225, 466
BslFI GGGAC 1 cut(s) 215
BslI CCNNNNNNNGG 3 cut(s) 199, 1184, 1233
BsmAI GTCTC 1 cut(s) 1231
BsmFI GGGAC 1 cut(s) 215
BsnI GGCC 3 cut(s) 231, 255, 595
Bso31I GGTCTC 1 cut(s) 1231
Bsp119I TTCGAA 1 cut(s) 1030
Bsp1286I GDGCHC 2 cut(s) 806, 981
Bsp13I TCCGGA 1 cut(s) 465
Bsp143I GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
BspACI CCGC 4 cut(s) 54, 682, 1155, 1331
BspANI GGCC 3 cut(s) 231, 255, 595
BspCNI CTCAG 4 cut(s) 421, 1035, 1267, 1351
BspEI TCCGGA 1 cut(s) 465
BspFNI CGCG 2 cut(s) 684, 1169
BspHI TCATGA 1 cut(s) 1162
BspLI GGNNCC 6 cut(s) 52, 191, 203, 204, 344, 1039
BspPI GGATC 3 cut(s) 596, 883, 1208
BspT104I TTCGAA 1 cut(s) 1030
BspT107I GGYRCC 2 cut(s) 50, 1037
BspTNI GGTCTC 1 cut(s) 1231
BsrBI CCGCTC 1 cut(s) 1331
BsrDI GCAATG 2 cut(s) 63, 513
BsrI ACTGG 4 cut(s) 127, 391, 699, 812
BssECI CCNNGG 6 cut(s) 94, 232, 610, 733, 849, 1241
BssMI GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
BssNAI GTATAC 1 cut(s) 1284
BssT1I CCWWGG 1 cut(s) 733
Bst1107I GTATAC 1 cut(s) 1284
Bst2UI CCWGG 5 cut(s) 87, 96, 234, 611, 850
Bst4CI ACNGT 3 cut(s) 1009, 1037, 1242
Bst6I CTCTTC 2 cut(s) 1049, 1123
BstBI TTCGAA 1 cut(s) 1030
BstC8I GCNNGC 2 cut(s) 355, 1365
BstDEI CTNAG 4 cut(s) 408, 1022, 1275, 1359
BstDSI CCRYGG 1 cut(s) 1241
BstEII GGTNACC 1 cut(s) 89
BstF5I GGATG 7 cut(s) 18, 154, 376, 484, 596, 909, 1238
BstFNI CGCG 2 cut(s) 684, 1169
BstKTI GATC 8 cut(s) 480, 591, 878, 932, 1142, 1149, 1162, 1203
BstMAI GTCTC 1 cut(s) 1231
BstMBI GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
BstMWI GCNNNNNNNGC 2 cut(s) 1001, 1068
BstNI CCWGG 5 cut(s) 87, 96, 234, 611, 850
BstNSI RCATGY 1 cut(s) 1357
BstPI GGTNACC 1 cut(s) 89
BstSCI CCNGG 5 cut(s) 85, 94, 232, 609, 848
BstSFI CTRYAG 1 cut(s) 1150
BstSLI GKGCMC 1 cut(s) 806
BstUI CGCG 2 cut(s) 684, 1169
BstV1I GCAGC 1 cut(s) 1028
BstZ17I GTATAC 1 cut(s) 1284
BsuRI GGCC 3 cut(s) 231, 255, 595
BtgI CCRYGG 1 cut(s) 1241
BtgZI GCGATG 1 cut(s) 666
BtrI CACGTC 1 cut(s) 1294
BtsCI GGATG 7 cut(s) 18, 154, 376, 484, 596, 909, 1238
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 4 cut(s) 384, 432, 433, 706
Cac8I GCNNGC 2 cut(s) 355, 1365
CaiI CAGNNNCTG 1 cut(s) 449
CciI TCATGA 1 cut(s) 1162
Cfr13I GGNCC 4 cut(s) 202, 230, 272, 342
CseI GACGC 3 cut(s) 673, 702, 1175
Csp6I GTAC 6 cut(s) 99, 454, 1038, 1108, 1188, 1351
CviAII CATG 6 cut(s) 339, 601, 775, 1163, 1197, 1354
CviQI GTAC 6 cut(s) 99, 454, 1038, 1108, 1188, 1351
DdeI CTNAG 4 cut(s) 408, 1022, 1275, 1359
DpnI GATC 8 cut(s) 479, 590, 877, 931, 1141, 1148, 1161, 1202
DpnII GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
Eam1104I CTCTTC 2 cut(s) 1049, 1123
EarI CTCTTC 2 cut(s) 1049, 1123
Eco130I CCWWGG 1 cut(s) 733
Eco31I GGTCTC 1 cut(s) 1231
Eco32I GATATC 1 cut(s) 617
Eco47I GGWCC 3 cut(s) 202, 272, 342
Eco91I GGTNACC 1 cut(s) 89
EcoO109I RGGNCCY 2 cut(s) 202, 230
EcoO65I GGTNACC 1 cut(s) 89
EcoRI GAATTC 1 cut(s) 658
EcoRII CCWGG 5 cut(s) 85, 94, 232, 609, 848
EcoRV GATATC 1 cut(s) 617
EcoT14I CCWWGG 1 cut(s) 733
ErhI CCWWGG 1 cut(s) 733
FaeI CATG 6 cut(s) 342, 604, 778, 1166, 1200, 1357
FalI AAGNNNNNCTT 2 cut(s) 543, 575
FaqI GGGAC 1 cut(s) 215
FatI CATG 6 cut(s) 338, 600, 774, 1162, 1196, 1353
FauI CCCGC 1 cut(s) 1324
FauNDI CATATG 1 cut(s) 1180
FbaI TGATCA 2 cut(s) 477, 1159
FblI GTMKAC 1 cut(s) 1283
Fnu4HI GCNGC 2 cut(s) 54, 1017
FokI GGATG 7 cut(s) 25, 161, 383, 471, 583, 896, 1245
Fsp4HI GCNGC 2 cut(s) 54, 1017
GluI GCNGC 2 cut(s) 54, 1017
GsuI CTGGAG 3 cut(s) 540, 593, 1329
HaeIII GGCC 3 cut(s) 231, 255, 595
HapII CCGG 3 cut(s) 48, 225, 466
HgaI GACGC 3 cut(s) 673, 702, 1175
Hin1II CATG 6 cut(s) 342, 604, 778, 1166, 1200, 1357
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HinfI GANTC 5 cut(s) 179, 437, 524, 1082, 1174
HpaII CCGG 3 cut(s) 48, 225, 466
HphI GGTGA 2 cut(s) 924, 1169
Hpy166II GTNNAC 8 cut(s) 101, 325, 454, 704, 804, 1190, 1252, 1284
Hpy188I TCNGA 5 cut(s) 571, 722, 769, 1205, 1300
Hpy188III TCNNGA 9 cut(s) 116, 368, 410, 466, 663, 1115, 1163, 1346, 1370
Hpy8I GTNNAC 8 cut(s) 101, 325, 454, 704, 804, 1190, 1252, 1284
Hpy99I CGWCG 1 cut(s) 908
HpyAV CCTTC 2 cut(s) 307, 407
HpyCH4III ACNGT 3 cut(s) 1009, 1037, 1242
HpyCH4IV ACGT 1 cut(s) 1293
HpyF10VI GCNNNNNNNGC 2 cut(s) 1001, 1068
HpyF3I CTNAG 4 cut(s) 408, 1022, 1275, 1359
HpySE526I ACGT 1 cut(s) 1293
Hsp92II CATG 6 cut(s) 342, 604, 778, 1166, 1200, 1357
KflI GGGWCCC 1 cut(s) 202
Kpn2I TCCGGA 1 cut(s) 465
KpnI GGTACC 1 cut(s) 1041
Ksp22I TGATCA 2 cut(s) 477, 1159
Kzo9I GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
LmnI GCTCC 3 cut(s) 612, 1328, 1348
Lsp1109I GCAGC 1 cut(s) 1028
LweI GCATC 6 cut(s) 361, 366, 546, 811, 863, 991
MaeII ACGT 1 cut(s) 1293
MaeIII GTNAC 9 cut(s) 89, 180, 416, 428, 553, 634, 642, 685, 1334
MalI GATC 8 cut(s) 479, 590, 877, 931, 1141, 1148, 1161, 1202
MbiI CCGCTC 1 cut(s) 1331
MboI GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
MboII GAAGA 2 cut(s) 1066, 1140
MfeI CAATTG 1 cut(s) 378
MhlI GDGCHC 2 cut(s) 806, 981
MluI ACGCGT 1 cut(s) 1167
MlyI GAGTC 2 cut(s) 188, 1076
MnlI CCTC 7 cut(s) 180, 216, 221, 558, 881, 1050, 1124
MroI TCCGGA 1 cut(s) 465
MroXI GAANNNNTTC 2 cut(s) 899, 924
MseI TTAA 3 cut(s) 278, 561, 747
MslI CAYNNNNRTG 2 cut(s) 651, 1195
MspA1I CMGCKG 1 cut(s) 1155
MspI CCGG 3 cut(s) 48, 225, 466
MspR9I CCNGG 5 cut(s) 87, 96, 234, 611, 850
MunI CAATTG 1 cut(s) 378
MvaI CCWGG 5 cut(s) 87, 96, 234, 611, 850
MvnI CGCG 2 cut(s) 684, 1169
MwoI GCNNNNNNNGC 2 cut(s) 1001, 1068
NdeI CATATG 1 cut(s) 1180
NdeII GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
NlaIII CATG 6 cut(s) 342, 604, 778, 1166, 1200, 1357
NlaIV GGNNCC 6 cut(s) 52, 191, 203, 204, 344, 1039
NmuCI GTSAC 5 cut(s) 180, 428, 553, 685, 1334
NspI RCATGY 1 cut(s) 1357
NspV TTCGAA 1 cut(s) 1030
PagI TCATGA 1 cut(s) 1162
PdmI GAANNNNTTC 2 cut(s) 899, 924
PfeI GAWTC 3 cut(s) 437, 524, 1174
PkrI GCNGC 2 cut(s) 55, 1018
PleI GAGTC 2 cut(s) 187, 1076
PpsI GAGTC 2 cut(s) 187, 1076
PpuMI RGGWCCY 1 cut(s) 202
Psp5II RGGWCCY 1 cut(s) 202
Psp6I CCWGG 5 cut(s) 85, 94, 232, 609, 848
PspEI GGTNACC 1 cut(s) 89
PspGI CCWGG 5 cut(s) 85, 94, 232, 609, 848
PspN4I GGNNCC 6 cut(s) 52, 191, 203, 204, 344, 1039
PspPI GGNCC 4 cut(s) 202, 230, 272, 342
PspPPI RGGWCCY 1 cut(s) 202
PstNI CAGNNNCTG 1 cut(s) 449
RsaI GTAC 6 cut(s) 100, 455, 1039, 1109, 1189, 1352
RsaNI GTAC 6 cut(s) 99, 454, 1038, 1108, 1188, 1351
RseI CAYNNNNRTG 2 cut(s) 651, 1195
SaqAI TTAA 3 cut(s) 278, 561, 747
SatI GCNGC 2 cut(s) 54, 1017
Sau3AI GATC 8 cut(s) 477, 588, 875, 929, 1139, 1146, 1159, 1200
Sau96I GGNCC 4 cut(s) 202, 230, 272, 342
SchI GAGTC 2 cut(s) 188, 1076
ScrFI CCNGG 5 cut(s) 87, 96, 234, 611, 850
SduI GDGCHC 2 cut(s) 806, 981
SfaNI GCATC 6 cut(s) 361, 366, 546, 811, 863, 991
SfcI CTRYAG 1 cut(s) 1150
SfuI TTCGAA 1 cut(s) 1030
SinI GGWCC 3 cut(s) 202, 272, 342
SmiMI CAYNNNNRTG 2 cut(s) 651, 1195
SmlI CTYRAG 1 cut(s) 549
SmoI CTYRAG 1 cut(s) 549
SsiI CCGC 4 cut(s) 54, 682, 1155, 1331
StyD4I CCNGG 5 cut(s) 85, 94, 232, 609, 848
StyI CCWWGG 1 cut(s) 733
TaaI ACNGT 3 cut(s) 1009, 1037, 1242
TaiI ACGT 1 cut(s) 1296
TaqI TCGA 6 cut(s) 177, 285, 903, 928, 1030, 1114
TaqII GACCGA 1 cut(s) 260
TatI WGTACW 1 cut(s) 1350
TauI GCSGC 1 cut(s) 56
TfiI GAWTC 3 cut(s) 437, 524, 1174
Tru1I TTAA 3 cut(s) 278, 561, 747
Tru9I TTAA 3 cut(s) 278, 561, 747
TscAI CASTG 4 cut(s) 391, 433, 439, 706
TseFI GTSAC 5 cut(s) 180, 428, 553, 685, 1334
TseI GCWGC 1 cut(s) 1016
Tsp45I GTSAC 5 cut(s) 180, 428, 553, 685, 1334
TspDTI ATGAA 7 cut(s) 20, 163, 165, 279, 516, 617, 933
TspGWI ACGGA 1 cut(s) 1269
TspRI CASTG 4 cut(s) 391, 433, 439, 706
VneI GTGCAC 1 cut(s) 802
VpaK11BI GGWCC 3 cut(s) 202, 272, 342
XapI RAATTY 4 cut(s) 22, 658, 671, 896
XceI RCATGY 1 cut(s) 1357
XcmI CCANNNNNNNNNTGG 1 cut(s) 846
XmiI GTMKAC 1 cut(s) 1283
XmnI GAANNNNTTC 2 cut(s) 899, 924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.