Rroxscaffold_2G00135160

Serine carboxypeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000102
Physical Location & Seq
Forward (+)
72797105 .. 72800233
3129 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00135160.1

Sequence Viewer

Length: 1509 bp
ATGGAAGCAACAAACTTTGAGAGGACAATACTGTTAGGACAGTTTGGTGCCAAAAATTTCTTCCTTGTGATATTTCTGCTGCTTTTATCAAAGCCAAAGCTGGTTACTTGCTCAATTGTCAGGTCTATTCCTGGATTTCCTGGTTCTCTTCCTTTCAAACTTGAAACTGGGTACATTGGGGTTGATGAGAAAGATGATGTGCAGTTCTTCTATTACTTTGTTGAATCTGAAAGAAATCCCAGGGATGATCCTCTTTTGCTCTGGCTCACTGGTGGTCCTTCTTGCTCTGCTCTAAGTGGACTTGCTTTTGAGATAGGCCCCATAAAGTTCAACATGGTTGAGTATAATGGTAGCTTGCCGACCTTTGTTCTTAATCCCTACTCATGGACAAAGGTTTCCAGCATAATATTTGTAGATTCACCTGTTGGCACCGGGTTTTCATATCCAAGGAGCTTGCAGTGGTCCAGTGATACATTATTTGTAAATCATATTTATAGTTTCCTCATGAAGTGGCTACTCTATCATCCTAAGTTCATTTCAAATCCAATCTATATTGCTGGTGACTCGTACTCTGGCATGATTGTCCCAGTTGTAGCTCAAGAAATAGTAAAAGGTATCGAAGTTGGGAATATACCAGCAATTAATCTTAAAGGTTATCTACTTGGGAACCCATGTACAGATTTAAATTTTGACGAGAATTCAAAGGTCTCATATGCCCATCGCATGGCACTTATACCTGATGAACTCTACAAGTCAGCAAAGAAGAATTGCAGAGGACAATATACAGGAATTGGTCAAAGCAATAAACAATGTGCAAAGTATCTCCAGGCAATCTCAGCATGCACCGAAAAAGTGAACCACGCACATATCTTAGAGCCTCGGTGTCTTCCGAGCTTTCCTATAATTAGTATGATGAATGATCACCGGAAAAATTGCATTGAAAGGTCGGAAGAGCCATCATTGGCTGTCAACCCAATTCACCTCGACCTCAATCCCAAACATATTGGCTTTCCTATATTTGGTTGCAGGAATTACCAAAATTTTCTGATGCATGTTTGGGCAAATGATGCTAATGTCCAGAAAGTACTTGGGGTTCAAAAAAGGATGTTCTGGATCAGGTGCAACAGCAGCTTGCCTTATGAAAGATATTTCCGCAGTGTGCTTAGCTATCATCGATCTCTCAATACCAGAGGTTATCGAGCCCTTGTATACAGTGGGGATCATGACATGGTGATACCGTACTTGGGAACCCTAGCATGGATTAAGTCCCTCAACTTTACTATTGTTGATCGCTGGAGACCGTGGCTGGTTGATGGTCAAGTTGCTGGATACTCCATCGAATACTCAAACAACTTTACATTTGCAACTGTTAAGTTGTTGTGGTGCAGGGAGGAGGTCACACAGCTCCAGAGTATCAGCCTAAGGAATGCTTTGCCATGTTTAAAAGGTGGATCTCTGAAGAGCCACTCTAACTCCCACTTCAGAGCGCTATCTCTAGACTATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016740 GO:0016746 GO:0016747 GO:0019748
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

502

Amino Acids

57.06

Weight (kDa)

8.83

Isoelectric Point (pI)

36.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 44 - 458 9.4e-113 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 47, 428
AccB7I CCANNNNNTGG 1 cut(s) 724
AccI GTMKAC 1 cut(s) 1209
AciI CCGC 1 cut(s) 1153
AclWI GGATC 4 cut(s) 242, 1121, 1227, 1459
AcsI RAATTY 4 cut(s) 55, 685, 697, 1039
AcuI CTGAAG 2 cut(s) 1465, 1478
AfaI GTAC 5 cut(s) 173, 569, 676, 1086, 1241
AfeI AGCGCT 1 cut(s) 1488
AfiI CCNNNNNNNGG 5 cut(s) 384, 724, 1019, 1244, 1257
AgsI TTSAA 8 cut(s) 157, 164, 224, 331, 540, 702, 941, 1097
AjnI CCWGG 4 cut(s) 130, 139, 239, 825
AjuI GAANNNNNNNTTGG 2 cut(s) 44, 76
AluBI AGCT 8 cut(s) 100, 354, 453, 596, 894, 1131, 1167, 1405
AluI AGCT 8 cut(s) 100, 354, 453, 596, 894, 1131, 1167, 1405
Alw26I GTCTC 2 cut(s) 712, 1291
AlwI GGATC 4 cut(s) 242, 1121, 1227, 1459
Aor51HI AGCGCT 1 cut(s) 1488
AoxI GGCC 1 cut(s) 316
ApeKI GCWGC 2 cut(s) 79, 1128
ApoI RAATTY 4 cut(s) 55, 685, 697, 1039
AseI ATTAAT 1 cut(s) 642
AspLEI GCGC 1 cut(s) 1489
AspS9I GGNCC 3 cut(s) 275, 317, 462
AsuC2I CCSGG 1 cut(s) 433
AsuHPI GGTGA 5 cut(s) 411, 572, 914, 971, 1243
AvaII GGWCC 2 cut(s) 275, 462
AxyI CCTNAGG 1 cut(s) 1421
BanI GGYRCC 2 cut(s) 47, 428
BanII GRGCYC 1 cut(s) 1204
BbsI GAAGAC 1 cut(s) 878
BbvI GCAGC 2 cut(s) 66, 1140
BccI CCATC 4 cut(s) 726, 964, 1307, 1343
BciT130I CCWGG 4 cut(s) 132, 141, 241, 827
BciVI GTATCC 1 cut(s) 1322
BclI TGATCA 1 cut(s) 919
BcnI CCSGG 1 cut(s) 433
BcoDI GTCTC 2 cut(s) 712, 1291
BfaI CTAG 2 cut(s) 1253, 1496
BfoI RGCGCY 1 cut(s) 1490
BfuI GTATCC 1 cut(s) 1322
BisI GCNGC 2 cut(s) 80, 1129
BlpI GCTNAGC 1 cut(s) 1163
BlsI GCNGC 2 cut(s) 81, 1130
BmcAI AGTACT 1 cut(s) 1086
Bme1390I CCNGG 5 cut(s) 132, 141, 241, 433, 827
Bme18I GGWCC 2 cut(s) 275, 462
BmgT120I GGNCC 3 cut(s) 275, 317, 462
BmiI GGNNCC 5 cut(s) 49, 319, 430, 668, 1249
BmrFI CCNGG 5 cut(s) 132, 141, 241, 433, 827
BmrI ACTGGG 2 cut(s) 177, 581
BmsI GCATC 2 cut(s) 1038, 1057
BmuI ACTGGG 2 cut(s) 177, 581
BpiI GAAGAC 1 cut(s) 878
BpmI CTGGAG 3 cut(s) 809, 1315, 1391
Bpu1102I GCTNAGC 1 cut(s) 1163
BpuEI CTTGAG 1 cut(s) 582
BpuMI CCSGG 1 cut(s) 433
Bsa29I ATCGAT 1 cut(s) 1174
BsaI GGTCTC 2 cut(s) 712, 1291
BsaJI CCNNGG 5 cut(s) 239, 240, 446, 878, 1301
BsaWI WCCGGW 1 cut(s) 924
BsaXI ACNNNNNCTCC 2 cut(s) 1457, 1487
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 724, 1019, 1244, 1257
Bse1I ACTGG 4 cut(s) 172, 274, 465, 587
Bse21I CCTNAGG 1 cut(s) 1421
BseBI CCWGG 4 cut(s) 132, 141, 241, 827
BseCI ATCGAT 1 cut(s) 1174
BseDI CCNNGG 5 cut(s) 239, 240, 446, 878, 1301
BseGI GGATG 3 cut(s) 250, 523, 1110
BseLI CCNNNNNNNGG 5 cut(s) 384, 724, 1019, 1244, 1257
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 4 cut(s) 172, 274, 465, 587
BseRI GAGGAG 1 cut(s) 1406
BseXI GCAGC 2 cut(s) 66, 1140
BsgI GTGCAG 2 cut(s) 221, 1405
BshFI GGCC 1 cut(s) 318
BshNI GGYRCC 2 cut(s) 47, 428
BshVI ATCGAT 1 cut(s) 1174
BsiSI CCGG 2 cut(s) 432, 925
BslFI GGGAC 2 cut(s) 569, 1252
BslI CCNNNNNNNGG 5 cut(s) 384, 724, 1019, 1244, 1257
BsmAI GTCTC 2 cut(s) 712, 1291
BsmFI GGGAC 2 cut(s) 569, 1252
BsmI GAATGC 1 cut(s) 1432
BsnI GGCC 1 cut(s) 318
Bso31I GGTCTC 2 cut(s) 712, 1291
Bsp1286I GDGCHC 1 cut(s) 1204
Bsp1407I TGTACA 1 cut(s) 674
Bsp143I GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
Bsp1720I GCTNAGC 1 cut(s) 1163
BspACI CCGC 1 cut(s) 1153
BspANI GGCC 1 cut(s) 318
BspCNI CTCAG 1 cut(s) 848
BspDI ATCGAT 1 cut(s) 1174
BspHI TCATGA 2 cut(s) 504, 1222
BspLI GGNNCC 5 cut(s) 49, 319, 430, 668, 1249
BspPI GGATC 4 cut(s) 242, 1121, 1227, 1459
BspQI GCTCTTC 2 cut(s) 945, 1454
BspT107I GGYRCC 2 cut(s) 47, 428
BspTNI GGTCTC 2 cut(s) 712, 1291
BsrGI TGTACA 1 cut(s) 674
BsrI ACTGG 4 cut(s) 172, 274, 465, 587
BssECI CCNNGG 5 cut(s) 239, 240, 446, 878, 1301
BssMI GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
BssNAI GTATAC 1 cut(s) 1210
BssT1I CCWWGG 1 cut(s) 446
Bst1107I GTATAC 1 cut(s) 1210
Bst2UI CCWGG 4 cut(s) 132, 141, 241, 827
Bst4CI ACNGT 6 cut(s) 33, 42, 1214, 1239, 1302, 1369
Bst6I CTCTTC 3 cut(s) 153, 945, 1454
BstAPI GCANNNNNTGC 1 cut(s) 1067
BstAUI TGTACA 1 cut(s) 674
BstC8I GCNNGC 4 cut(s) 356, 455, 841, 1133
BstDEI CTNAG 6 cut(s) 293, 528, 835, 871, 1163, 1421
BstDSI CCRYGG 1 cut(s) 1301
BstF5I GGATG 3 cut(s) 250, 523, 1110
BstH2I RGCGCY 1 cut(s) 1490
BstHHI GCGC 1 cut(s) 1489
BstKTI GATC 7 cut(s) 250, 922, 1116, 1178, 1222, 1291, 1454
BstMAI GTCTC 2 cut(s) 712, 1291
BstMBI GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
BstMWI GCNNNNNNNGC 3 cut(s) 836, 1067, 1128
BstNI CCWGG 4 cut(s) 132, 141, 241, 827
BstNSI RCATGY 2 cut(s) 843, 1055
BstSCI CCNGG 5 cut(s) 130, 139, 239, 431, 825
BstV1I GCAGC 2 cut(s) 66, 1140
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 1 cut(s) 1451
BstYI RGATCY 1 cut(s) 1451
BstZ17I GTATAC 1 cut(s) 1210
Bsu15I ATCGAT 1 cut(s) 1174
Bsu36I CCTNAGG 1 cut(s) 1421
BsuI GTATCC 1 cut(s) 1322
BsuRI GGCC 1 cut(s) 318
BsuTUI ATCGAT 1 cut(s) 1174
BtgI CCRYGG 1 cut(s) 1301
BtgZI GCGATG 1 cut(s) 704
BtsCI GGATG 3 cut(s) 250, 523, 1110
BtsI GCAGTG 2 cut(s) 464, 1162
BtsIMutI CAGTG 5 cut(s) 267, 464, 472, 1162, 1219
Cac8I GCNNGC 4 cut(s) 356, 455, 841, 1133
CciI TCATGA 2 cut(s) 504, 1222
CfoI GCGC 1 cut(s) 1489
Cfr13I GGNCC 3 cut(s) 275, 317, 462
ClaI ATCGAT 1 cut(s) 1174
Csp6I GTAC 5 cut(s) 172, 568, 675, 1085, 1240
CviQI GTAC 5 cut(s) 172, 568, 675, 1085, 1240
DdeI CTNAG 6 cut(s) 293, 528, 835, 871, 1163, 1421
DpnI GATC 7 cut(s) 249, 921, 1115, 1177, 1221, 1290, 1453
DpnII GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
DraI TTTAAA 2 cut(s) 684, 1443
Eam1104I CTCTTC 3 cut(s) 153, 945, 1454
EarI CTCTTC 3 cut(s) 153, 945, 1454
Eco130I CCWWGG 1 cut(s) 446
Eco24I GRGCYC 1 cut(s) 1204
Eco31I GGTCTC 2 cut(s) 712, 1291
Eco47I GGWCC 2 cut(s) 275, 462
Eco47III AGCGCT 1 cut(s) 1488
Eco57I CTGAAG 2 cut(s) 1465, 1478
Eco81I CCTNAGG 1 cut(s) 1421
EcoO109I RGGNCCY 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 697
EcoRII CCWGG 4 cut(s) 130, 139, 239, 825
EcoT14I CCWWGG 1 cut(s) 446
EcoT22I ATGCAT 1 cut(s) 1053
EcoT38I GRGCYC 1 cut(s) 1204
ErhI CCWWGG 1 cut(s) 446
FalI AAGNNNNNCTT 2 cut(s) 1414, 1446
FaqI GGGAC 2 cut(s) 569, 1252
FauNDI CATATG 1 cut(s) 712
FbaI TGATCA 1 cut(s) 919
FblI GTMKAC 1 cut(s) 1209
Fnu4HI GCNGC 2 cut(s) 80, 1129
FokI GGATG 3 cut(s) 257, 510, 1117
FriOI GRGCYC 1 cut(s) 1204
Fsp4HI GCNGC 2 cut(s) 80, 1129
FspBI CTAG 2 cut(s) 1253, 1496
GlaI GCGC 1 cut(s) 1488
GluI GCNGC 2 cut(s) 80, 1129
GsuI CTGGAG 3 cut(s) 809, 1315, 1391
HaeII RGCGCY 1 cut(s) 1490
HaeIII GGCC 1 cut(s) 318
HapII CCGG 2 cut(s) 432, 925
HhaI GCGC 1 cut(s) 1489
Hin6I GCGC 1 cut(s) 1487
HinP1I GCGC 1 cut(s) 1487
HincII GTYRAC 1 cut(s) 970
HindII GTYRAC 1 cut(s) 970
HinfI GANTC 3 cut(s) 224, 416, 563
HpaII CCGG 2 cut(s) 432, 925
HphI GGTGA 5 cut(s) 411, 572, 914, 971, 1243
Hpy166II GTNNAC 4 cut(s) 299, 856, 970, 1210
Hpy188I TCNGA 6 cut(s) 229, 891, 949, 1047, 1458, 1484
Hpy188III TCNNGA 7 cut(s) 505, 599, 1078, 1111, 1223, 1408, 1496
Hpy8I GTNNAC 4 cut(s) 299, 856, 970, 1210
HpyAV CCTTC 1 cut(s) 288
HpyCH4III ACNGT 6 cut(s) 33, 42, 1214, 1239, 1302, 1369
HpyF10VI GCNNNNNNNGC 3 cut(s) 836, 1067, 1128
HpyF3I CTNAG 6 cut(s) 293, 528, 835, 871, 1163, 1421
HspAI GCGC 1 cut(s) 1487
Ksp22I TGATCA 1 cut(s) 919
Kzo9I GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
LguI GCTCTTC 2 cut(s) 945, 1454
LmnI GCTCC 2 cut(s) 450, 1410
Lsp1109I GCAGC 2 cut(s) 66, 1140
LweI GCATC 2 cut(s) 1038, 1057
MaeI CTAG 2 cut(s) 1253, 1496
MaeIII GTNAC 3 cut(s) 103, 560, 1396
MalI GATC 7 cut(s) 249, 921, 1115, 1177, 1221, 1290, 1453
MboI GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
MboII GAAGA 7 cut(s) 52, 140, 199, 775, 878, 962, 1471
MfeI CAATTG 1 cut(s) 114
MflI RGATCY 1 cut(s) 1451
MhlI GDGCHC 1 cut(s) 1204
MlyI GAGTC 1 cut(s) 557
MmeI TCCRAC 1 cut(s) 927
Mph1103I ATGCAT 1 cut(s) 1053
MseI TTAA 7 cut(s) 372, 642, 648, 683, 1263, 1371, 1442
MspI CCGG 2 cut(s) 432, 925
MspR9I CCNGG 5 cut(s) 132, 141, 241, 433, 827
MunI CAATTG 1 cut(s) 114
Mva1269I GAATGC 1 cut(s) 1432
MvaI CCWGG 4 cut(s) 132, 141, 241, 827
MwoI GCNNNNNNNGC 3 cut(s) 836, 1067, 1128
NciI CCSGG 1 cut(s) 433
NdeI CATATG 1 cut(s) 712
NdeII GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
NlaIV GGNNCC 5 cut(s) 49, 319, 430, 668, 1249
NmuCI GTSAC 2 cut(s) 560, 1396
NsiI ATGCAT 1 cut(s) 1053
NspI RCATGY 2 cut(s) 843, 1055
PaeI GCATGC 1 cut(s) 843
PagI TCATGA 2 cut(s) 504, 1222
PasI CCCWGGG 1 cut(s) 240
PciSI GCTCTTC 2 cut(s) 945, 1454
PctI GAATGC 1 cut(s) 1432
PfeI GAWTC 2 cut(s) 224, 416
PflMI CCANNNNNTGG 1 cut(s) 724
PfoI TCCNGGA 1 cut(s) 130
PkrI GCNGC 2 cut(s) 81, 1130
PleI GAGTC 1 cut(s) 557
PpsI GAGTC 1 cut(s) 557
PshBI ATTAAT 1 cut(s) 642
Psp6I CCWGG 4 cut(s) 130, 139, 239, 825
PspGI CCWGG 4 cut(s) 130, 139, 239, 825
PspN4I GGNNCC 5 cut(s) 49, 319, 430, 668, 1249
PspPI GGNCC 3 cut(s) 275, 317, 462
PsrI GAACNNNNNNTAC 2 cut(s) 1077, 1109
PsuI RGATCY 1 cut(s) 1451
RsaI GTAC 5 cut(s) 173, 569, 676, 1086, 1241
RsaNI GTAC 5 cut(s) 172, 568, 675, 1085, 1240
SapI GCTCTTC 2 cut(s) 945, 1454
SaqAI TTAA 7 cut(s) 372, 642, 648, 683, 1263, 1371, 1442
SatI GCNGC 2 cut(s) 80, 1129
Sau3AI GATC 7 cut(s) 247, 919, 1113, 1175, 1219, 1288, 1451
Sau96I GGNCC 3 cut(s) 275, 317, 462
ScaI AGTACT 1 cut(s) 1086
SchI GAGTC 1 cut(s) 557
ScrFI CCNGG 5 cut(s) 132, 141, 241, 433, 827
SduI GDGCHC 1 cut(s) 1204
SfaNI GCATC 2 cut(s) 1038, 1057
SinI GGWCC 2 cut(s) 275, 462
SmiI ATTTAAAT 1 cut(s) 684
SmlI CTYRAG 1 cut(s) 597
SmoI CTYRAG 1 cut(s) 597
SphI GCATGC 1 cut(s) 843
SsiI CCGC 1 cut(s) 1153
SspI AATATT 1 cut(s) 408
SspMI CTAG 2 cut(s) 1253, 1496
StyD4I CCNGG 5 cut(s) 130, 139, 239, 431, 825
StyI CCWWGG 1 cut(s) 446
SwaI ATTTAAAT 1 cut(s) 684
TaaI ACNGT 6 cut(s) 33, 42, 1214, 1239, 1302, 1369
TaqI TCGA 5 cut(s) 618, 984, 1174, 1198, 1338
TatI WGTACW 2 cut(s) 674, 1084
TfiI GAWTC 2 cut(s) 224, 416
Tru1I TTAA 7 cut(s) 372, 642, 648, 683, 1263, 1371, 1442
Tru9I TTAA 7 cut(s) 372, 642, 648, 683, 1263, 1371, 1442
TscAI CASTG 5 cut(s) 274, 464, 472, 1162, 1219
TseFI GTSAC 2 cut(s) 560, 1396
TseI GCWGC 2 cut(s) 79, 1128
Tsp45I GTSAC 2 cut(s) 560, 1396
TspDTI ATGAA 6 cut(s) 429, 521, 523, 756, 929, 1155
TspRI CASTG 5 cut(s) 274, 464, 472, 1162, 1219
Van91I CCANNNNNTGG 1 cut(s) 724
VpaK11BI GGWCC 2 cut(s) 275, 462
VspI ATTAAT 1 cut(s) 642
XapI RAATTY 4 cut(s) 55, 685, 697, 1039
XbaI TCTAGA 1 cut(s) 1495
XceI RCATGY 2 cut(s) 843, 1055
XcmI CCANNNNNNNNNTGG 1 cut(s) 1085
XmiI GTMKAC 1 cut(s) 1209
XspI CTAG 2 cut(s) 1253, 1496
ZrmI AGTACT 1 cut(s) 1086
Zsp2I ATGCAT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.