Rroxscaffold_7G00212780

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000102
Physical Location & Seq
Reverse (-)
63275940 .. 63283780
7841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00212780.1

Sequence Viewer

Length: 1404 bp
ATGTTGGTACAAGCCCTTGTTCTAGTCCTCCTTTTTCATATTGTTTCTTCCAGGTCCAACATCACCGCCTTACCCGGCTTTTCGGGTGACCTTCCATTCAAACTTGAAACTGGGTACATCGGAGTTGGAAACTTGGACGATGTGCAACTATTCTATTACTTCATTGAGTCCGAAGGAACTCCAGAGGATGATCCTCTTGTGCTTTGGCTCACCGGTGGTCCTGGCTGTTCTGGTTTTTCTGCCCTTGTATACGAAAATATTGGTCCACTATCATTTGACTATGCAGATCCCTTTGACAACAAGCCACAACTCAAGTTGAATCCATACTCATGGACAAAGGTTGCCAACATAATATTTATAGATGCCCCTGTGGGGACAGGGTTCTCATATGCAAAAAGTTGGGAAAGATACCCCATTCTGAATGACACACTATCAGCTGCACAAACATATCAGTTTCTTAGAAAGTGGCTAGTGGATCATCCCAGGTTCCTCTCTAATCCACTCTATATTGCTGGAGATTCTTATGCAGGCATAGTTCTTCCGATAATCGTTCAAGAAGTATCTGATGGTAATAGAGATGGAGTTGAACCAGTAATGAATCTCCAAGGATATGTGCTTGGCAACCCAGTCACAGATGAAGAAAGAGACCAGAATTCCCAAGTACTGTTTGCTTACCTAAAAGCTCTTATATCACATGAACTATACCAGTCAGTCAAAAGTAATTGCAGAGGGGAGTATGTAAATGTGGATCCAAACAACGCATTATGTGTTTACGATCTTGAACTTGTCAACGAGTGCATCCAAGGCATAAACCTTCCACACATATTGGAACCTGAATGTACTATCAAATCCCCAAAGCCGATAGGGAGAGAGTGGGATCCTCGCGATTTCAGTAATAAGGAGCTCGTACATTCCCTTCTTCAGTTTCCTCAAGTTTCTAGGGCATGGTGTCGGGTTTATAATTATTTTTCTTCATTTACTTGGGCAAATGATAAAACTGTTCAATCTGCTCTTCATGTAGAAAAGGGAAGCATCAAGGAATGGGTTAGATGCAATTGGAGCTTAAGTGATTCTTATGTGAAAGATGTTTCTTCTAGTGTTGGTTATCATCAGAACCTCGCAAGAAAAGGTTATAGAGTTCTGATATACAGTGGTGATCATGATATGGCTATTCCATATGTGGGTACTATTGCTTGGATAGAATCTCTGAACTTGACTCTCGACAGTCAATGGAAACCTTGGTTCGTCAATGCACAAGTTGCAGGCTACAAAACTAAGTATACATTGGGAAAATATGAGTTGACATATACAACCATAAAGGGTGCCGGTCACACAGCTCCAGAGTACAAACCCAAAGAATGTTTTGCTATGATCAGTAGATGGTTCGCATACTACCCTCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

467

Amino Acids

52.9

Weight (kDa)

5.28

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 25 - 462 1.9e-124 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 960
AccB1I GGYRCC 1 cut(s) 1322
AccI GTMKAC 2 cut(s) 249, 1280
AccII CGCG 1 cut(s) 885
AciI CCGC 1 cut(s) 66
AclWI GGATC 7 cut(s) 185, 281, 483, 743, 756, 872, 885
AcsI RAATTY 1 cut(s) 652
AcuI CTGAAG 1 cut(s) 905
AfaI GTAC 7 cut(s) 9, 116, 663, 841, 909, 1186, 1346
AfiI CCNNNNNNNGG 2 cut(s) 372, 1181
AflII CTTAAG 1 cut(s) 1063
AgeI ACCGGT 1 cut(s) 212
AgsI TTSAA 7 cut(s) 100, 107, 319, 554, 587, 782, 1004
AjnI CCWGG 3 cut(s) 50, 220, 482
AluBI AGCT 5 cut(s) 437, 683, 904, 1062, 1337
AluI AGCT 5 cut(s) 437, 683, 904, 1062, 1337
Alw21I GWGCWC 1 cut(s) 906
Alw26I GTCTC 1 cut(s) 639
AlwI GGATC 7 cut(s) 185, 281, 483, 743, 756, 872, 885
ApeKI GCWGC 1 cut(s) 437
ApoI RAATTY 1 cut(s) 652
AsiGI ACCGGT 1 cut(s) 212
AspS9I GGNCC 3 cut(s) 54, 218, 263
AsuC2I CCSGG 1 cut(s) 75
AsuHPI GGTGA 4 cut(s) 55, 98, 202, 1166
AvaII GGWCC 3 cut(s) 54, 218, 263
BamHI GGATCC 2 cut(s) 748, 877
BanI GGYRCC 1 cut(s) 1322
BanII GRGCYC 1 cut(s) 906
BarI GAAGNNNNNNTAC 2 cut(s) 900, 932
Bbv12I GWGCWC 1 cut(s) 906
BbvI GCAGC 1 cut(s) 424
BccI CCATC 3 cut(s) 560, 572, 1374
BciT130I CCWGG 3 cut(s) 52, 222, 484
BclI TGATCA 2 cut(s) 1156, 1371
BcnI CCSGG 1 cut(s) 75
BcoDI GTCTC 1 cut(s) 639
BfaI CTAG 4 cut(s) 23, 470, 939, 1095
BfmI CTRYAG 1 cut(s) 1400
BfrI CTTAAG 1 cut(s) 1063
BisI GCNGC 1 cut(s) 438
BlsI GCNGC 1 cut(s) 439
BmcAI AGTACT 1 cut(s) 663
Bme1390I CCNGG 4 cut(s) 52, 75, 222, 484
Bme18I GGWCC 3 cut(s) 54, 218, 263
BmgT120I GGNCC 3 cut(s) 54, 218, 263
BmiI GGNNCC 5 cut(s) 488, 750, 831, 879, 1324
BmrFI CCNGG 4 cut(s) 52, 75, 222, 484
BmrI ACTGGG 2 cut(s) 120, 620
BmsI GCATC 4 cut(s) 352, 807, 1040, 1041
BmuI ACTGGG 2 cut(s) 120, 620
BpmI CTGGAG 3 cut(s) 165, 534, 1323
BpuEI CTTGAG 2 cut(s) 296, 915
BpuMI CCSGG 1 cut(s) 75
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 4 cut(s) 482, 604, 802, 1238
BsaWI WCCGGW 1 cut(s) 212
BsaXI ACNNNNNCTCC 2 cut(s) 1051, 1081
Bsc4I CCNNNNNNNGG 2 cut(s) 372, 1181
Bse118I RCCGGY 2 cut(s) 212, 1325
Bse1I ACTGG 4 cut(s) 115, 590, 626, 706
BseBI CCWGG 3 cut(s) 52, 222, 484
BseDI CCNNGG 4 cut(s) 482, 604, 802, 1238
BseGI GGATG 3 cut(s) 193, 478, 798
BseLI CCNNNNNNNGG 2 cut(s) 372, 1181
BseNI ACTGG 4 cut(s) 115, 590, 626, 706
BseXI GCAGC 1 cut(s) 424
BsgI GTGCAG 1 cut(s) 423
Bsh1236I CGCG 1 cut(s) 885
BshNI GGYRCC 1 cut(s) 1322
BshTI ACCGGT 1 cut(s) 212
BsiHKAI GWGCWC 1 cut(s) 906
BsiSI CCGG 3 cut(s) 75, 213, 1326
BslFI GGGAC 1 cut(s) 388
BslI CCNNNNNNNGG 2 cut(s) 372, 1181
BsmAI GTCTC 1 cut(s) 639
BsmFI GGGAC 1 cut(s) 388
Bso31I GGTCTC 1 cut(s) 639
Bsp1286I GDGCHC 1 cut(s) 906
Bsp143I GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
Bsp68I TCGCGA 1 cut(s) 885
BspACI CCGC 1 cut(s) 66
BspFNI CGCG 1 cut(s) 885
BspHI TCATGA 1 cut(s) 1159
BspLI GGNNCC 5 cut(s) 488, 750, 831, 879, 1324
BspPI GGATC 7 cut(s) 185, 281, 483, 743, 756, 872, 885
BspQI GCTCTTC 1 cut(s) 1017
BspT107I GGYRCC 1 cut(s) 1322
BspTI CTTAAG 1 cut(s) 1063
BspTNI GGTCTC 1 cut(s) 639
BsrFI RCCGGY 2 cut(s) 212, 1325
BsrI ACTGG 4 cut(s) 115, 590, 626, 706
BssAI RCCGGY 2 cut(s) 212, 1325
BssECI CCNNGG 4 cut(s) 482, 604, 802, 1238
BssMI GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
BssNAI GTATAC 2 cut(s) 250, 1281
BssT1I CCWWGG 3 cut(s) 604, 802, 1238
Bst1107I GTATAC 2 cut(s) 250, 1281
Bst2UI CCWGG 3 cut(s) 52, 222, 484
Bst4CI ACNGT 4 cut(s) 666, 1000, 1151, 1226
Bst6I CTCTTC 1 cut(s) 1017
BstAFI CTTAAG 1 cut(s) 1063
BstAPI GCANNNNNTGC 1 cut(s) 1259
BstC8I GCNNGC 2 cut(s) 529, 1264
BstDEI CTNAG 2 cut(s) 458, 1275
BstEII GGTNACC 1 cut(s) 86
BstF5I GGATG 3 cut(s) 193, 478, 798
BstFNI CGCG 1 cut(s) 885
BstKTI GATC 8 cut(s) 193, 289, 478, 751, 778, 880, 1159, 1374
BstMAI GTCTC 1 cut(s) 639
BstMBI GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
BstMWI GCNNNNNNNGC 3 cut(s) 804, 1059, 1259
BstNI CCWGG 3 cut(s) 52, 222, 484
BstPI GGTNACC 1 cut(s) 86
BstSCI CCNGG 4 cut(s) 50, 73, 220, 482
BstSFI CTRYAG 1 cut(s) 1400
BstUI CGCG 1 cut(s) 885
BstV1I GCAGC 1 cut(s) 424
BstX2I RGATCY 3 cut(s) 286, 748, 877
BstXI CCANNNNNNTGG 1 cut(s) 330
BstYI RGATCY 3 cut(s) 286, 748, 877
BstZ17I GTATAC 2 cut(s) 250, 1281
BtsCI GGATG 3 cut(s) 193, 478, 798
BtsIMutI CAGTG 1 cut(s) 1156
BtuMI TCGCGA 1 cut(s) 885
Cac8I GCNNGC 2 cut(s) 529, 1264
CciI TCATGA 1 cut(s) 1159
Cfr10I RCCGGY 2 cut(s) 212, 1325
Cfr13I GGNCC 3 cut(s) 54, 218, 263
Csp6I GTAC 7 cut(s) 8, 115, 662, 840, 908, 1185, 1345
CspAI ACCGGT 1 cut(s) 212
CspCI CAANNNNNGTGG 2 cut(s) 807, 842
CviAII CATG 5 cut(s) 330, 695, 945, 1016, 1160
CviQI GTAC 7 cut(s) 8, 115, 662, 840, 908, 1185, 1345
DdeI CTNAG 2 cut(s) 458, 1275
DpnI GATC 8 cut(s) 192, 288, 477, 750, 777, 879, 1158, 1373
DpnII GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
Eam1104I CTCTTC 1 cut(s) 1017
EarI CTCTTC 1 cut(s) 1017
Ecl136II GAGCTC 1 cut(s) 904
Eco130I CCWWGG 3 cut(s) 604, 802, 1238
Eco24I GRGCYC 1 cut(s) 906
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 3 cut(s) 54, 218, 263
Eco53kI GAGCTC 1 cut(s) 904
Eco57I CTGAAG 1 cut(s) 905
Eco91I GGTNACC 1 cut(s) 86
EcoICRI GAGCTC 1 cut(s) 904
EcoO65I GGTNACC 1 cut(s) 86
EcoRI GAATTC 1 cut(s) 652
EcoRII CCWGG 3 cut(s) 50, 220, 482
EcoT14I CCWWGG 3 cut(s) 604, 802, 1238
EcoT38I GRGCYC 1 cut(s) 906
ErhI CCWWGG 3 cut(s) 604, 802, 1238
FaeI CATG 5 cut(s) 333, 698, 948, 1019, 1163
FalI AAGNNNNNCTT 2 cut(s) 1057, 1089
FaqI GGGAC 1 cut(s) 388
FatI CATG 5 cut(s) 329, 694, 944, 1015, 1159
FauNDI CATATG 2 cut(s) 388, 1177
FbaI TGATCA 2 cut(s) 1156, 1371
FblI GTMKAC 2 cut(s) 249, 1280
Fnu4HI GCNGC 1 cut(s) 438
FokI GGATG 3 cut(s) 200, 465, 785
FriOI GRGCYC 1 cut(s) 906
Fsp4HI GCNGC 1 cut(s) 438
FspBI CTAG 4 cut(s) 23, 470, 939, 1095
GluI GCNGC 1 cut(s) 438
GsuI CTGGAG 3 cut(s) 165, 534, 1323
HapII CCGG 3 cut(s) 75, 213, 1326
Hin1II CATG 5 cut(s) 333, 698, 948, 1019, 1163
HincII GTYRAC 2 cut(s) 790, 1302
HindII GTYRAC 2 cut(s) 790, 1302
HinfI GANTC 7 cut(s) 167, 319, 518, 598, 1070, 1202, 1216
HpaII CCGG 3 cut(s) 75, 213, 1326
HphI GGTGA 4 cut(s) 55, 98, 202, 1166
Hpy166II GTNNAC 6 cut(s) 250, 266, 772, 790, 1281, 1302
Hpy188I TCNGA 8 cut(s) 122, 172, 420, 543, 565, 1113, 1143, 1209
Hpy188III TCNNGA 7 cut(s) 182, 554, 779, 884, 1160, 1220, 1340
Hpy8I GTNNAC 6 cut(s) 250, 266, 772, 790, 1281, 1302
HpyAV CCTTC 4 cut(s) 101, 167, 824, 926
HpyCH4III ACNGT 4 cut(s) 666, 1000, 1151, 1226
HpyF10VI GCNNNNNNNGC 3 cut(s) 804, 1059, 1259
HpyF3I CTNAG 2 cut(s) 458, 1275
Hsp92II CATG 5 cut(s) 333, 698, 948, 1019, 1163
Ksp22I TGATCA 2 cut(s) 1156, 1371
Kzo9I GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
LguI GCTCTTC 1 cut(s) 1017
LmnI GCTCC 3 cut(s) 901, 1059, 1342
Lsp1109I GCAGC 1 cut(s) 424
LweI GCATC 4 cut(s) 352, 807, 1040, 1041
MaeI CTAG 4 cut(s) 23, 470, 939, 1095
MaeIII GTNAC 3 cut(s) 86, 628, 1328
MalI GATC 8 cut(s) 192, 288, 477, 750, 777, 879, 1158, 1373
MboI GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
MboII GAAGA 7 cut(s) 39, 530, 650, 911, 963, 1004, 1083
MfeI CAATTG 1 cut(s) 1054
MflI RGATCY 3 cut(s) 286, 748, 877
MhlI GDGCHC 1 cut(s) 906
MluCI AATT 4 cut(s) 652, 721, 961, 1054
MlyI GAGTC 2 cut(s) 176, 1210
MmeI TCCRAC 2 cut(s) 81, 106
MnlI CCTC 8 cut(s) 38, 178, 204, 500, 722, 891, 939, 1127
MseI TTAA 1 cut(s) 1064
MslI CAYNNNNRTG 1 cut(s) 328
MspA1I CMGCKG 1 cut(s) 437
MspCI CTTAAG 1 cut(s) 1063
MspI CCGG 3 cut(s) 75, 213, 1326
MspR9I CCNGG 4 cut(s) 52, 75, 222, 484
MunI CAATTG 1 cut(s) 1054
MvaI CCWGG 3 cut(s) 52, 222, 484
MvnI CGCG 1 cut(s) 885
MwoI GCNNNNNNNGC 3 cut(s) 804, 1059, 1259
NciI CCSGG 1 cut(s) 75
NdeI CATATG 2 cut(s) 388, 1177
NdeII GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
NlaIII CATG 5 cut(s) 333, 698, 948, 1019, 1163
NlaIV GGNNCC 5 cut(s) 488, 750, 831, 879, 1324
NmuCI GTSAC 3 cut(s) 86, 628, 1328
NruI TCGCGA 1 cut(s) 885
PagI TCATGA 1 cut(s) 1159
PciSI GCTCTTC 1 cut(s) 1017
PfeI GAWTC 5 cut(s) 319, 518, 598, 1070, 1202
PinAI ACCGGT 1 cut(s) 212
PkrI GCNGC 1 cut(s) 439
PleI GAGTC 2 cut(s) 175, 1210
PpsI GAGTC 2 cut(s) 175, 1210
PsiI TTATAA 1 cut(s) 960
Psp124BI GAGCTC 1 cut(s) 906
Psp6I CCWGG 3 cut(s) 50, 220, 482
PspEI GGTNACC 1 cut(s) 86
PspGI CCWGG 3 cut(s) 50, 220, 482
PspN4I GGNNCC 5 cut(s) 488, 750, 831, 879, 1324
PspPI GGNCC 3 cut(s) 54, 218, 263
PsuI RGATCY 3 cut(s) 286, 748, 877
PvuII CAGCTG 1 cut(s) 437
RruI TCGCGA 1 cut(s) 885
RsaI GTAC 7 cut(s) 9, 116, 663, 841, 909, 1186, 1346
RsaNI GTAC 7 cut(s) 8, 115, 662, 840, 908, 1185, 1345
RseI CAYNNNNRTG 1 cut(s) 328
SacI GAGCTC 1 cut(s) 906
SapI GCTCTTC 1 cut(s) 1017
SaqAI TTAA 1 cut(s) 1064
SatI GCNGC 1 cut(s) 438
Sau3AI GATC 8 cut(s) 190, 286, 475, 748, 775, 877, 1156, 1371
Sau96I GGNCC 3 cut(s) 54, 218, 263
ScaI AGTACT 1 cut(s) 663
SchI GAGTC 2 cut(s) 176, 1210
ScrFI CCNGG 4 cut(s) 52, 75, 222, 484
SduI GDGCHC 1 cut(s) 906
SfaNI GCATC 4 cut(s) 352, 807, 1040, 1041
SfcI CTRYAG 1 cut(s) 1400
SgrAI CRCCGGYG 1 cut(s) 212
SinI GGWCC 3 cut(s) 54, 218, 263
SmiMI CAYNNNNRTG 1 cut(s) 328
SmlI CTYRAG 3 cut(s) 311, 930, 1063
SmoI CTYRAG 3 cut(s) 311, 930, 1063
Sse9I AATT 4 cut(s) 652, 721, 961, 1054
SsiI CCGC 1 cut(s) 66
SspI AATATT 2 cut(s) 259, 354
SspMI CTAG 4 cut(s) 23, 470, 939, 1095
SstI GAGCTC 1 cut(s) 906
StyD4I CCNGG 4 cut(s) 50, 73, 220, 482
StyI CCWWGG 3 cut(s) 604, 802, 1238
TaaI ACNGT 4 cut(s) 666, 1000, 1151, 1226
TaqI TCGA 1 cut(s) 1221
TasI AATT 4 cut(s) 652, 721, 961, 1054
TatI WGTACW 3 cut(s) 661, 839, 1344
TfiI GAWTC 5 cut(s) 319, 518, 598, 1070, 1202
Tru1I TTAA 1 cut(s) 1064
Tru9I TTAA 1 cut(s) 1064
TscAI CASTG 1 cut(s) 1156
TseFI GTSAC 3 cut(s) 86, 628, 1328
TseI GCWGC 1 cut(s) 437
Tsp45I GTSAC 3 cut(s) 86, 628, 1328
TspDTI ATGAA 7 cut(s) 26, 151, 611, 651, 711, 963, 1004
TspRI CASTG 1 cut(s) 1156
Vha464I CTTAAG 1 cut(s) 1063
VpaK11BI GGWCC 3 cut(s) 54, 218, 263
XapI RAATTY 1 cut(s) 652
XmiI GTMKAC 2 cut(s) 249, 1280
XspI CTAG 4 cut(s) 23, 470, 939, 1095
ZrmI AGTACT 1 cut(s) 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.