Prupe.8G130000_v2.0.a1

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000102
Physical Location & Seq
Forward (+)
15318016 .. 15318757
742 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G130000.1

Sequence Viewer

Length: 240 bp
ATGTTTGTTCCATACGTGGGCACTGAAGAATGGATAACATCTCTAAATTTGAGTATTGATTACACTTGGAGACCATGGTTTGTCAATGGCCAAGTTGCCGGGTATACGAAAGCATATACAAGGAAAGCGTACAGTTTGACATATGCGACTGTGAAGGGAGCTGGCCACGCAGCTACAGAGTACAATCCTAGGGAATGTTTTCCCATGATTGATAGGTGGCTTTCATATTACTATATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

80

Amino Acids

9.29

Weight (kDa)

7.82

Isoelectric Point (pI)

27.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 104
AcoI YGGCCR 2 cut(s) 88, 163
AcsI RAATTY 1 cut(s) 46
AcuI CTGAAG 1 cut(s) 45
AfaI GTAC 2 cut(s) 131, 182
AfiI CCNNNNNNNGG 1 cut(s) 17
AluBI AGCT 2 cut(s) 161, 173
AluI AGCT 2 cut(s) 161, 173
Alw26I GTCTC 1 cut(s) 64
AoxI GGCC 2 cut(s) 88, 163
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 1 cut(s) 46
Asp700I GAANNNNTTC 1 cut(s) 198
AspA2I CCTAGG 1 cut(s) 188
AsuC2I CCSGG 1 cut(s) 100
AvrII CCTAGG 1 cut(s) 188
BaeGI GKGCMC 1 cut(s) 23
BalI TGGCCA 2 cut(s) 90, 165
BbvI GCAGC 1 cut(s) 182
BcnI CCSGG 1 cut(s) 100
BcoDI GTCTC 1 cut(s) 64
BfaI CTAG 1 cut(s) 189
BfmI CTRYAG 1 cut(s) 174
BisI GCNGC 1 cut(s) 171
BlnI CCTAGG 1 cut(s) 188
BlsI GCNGC 1 cut(s) 172
Bme1390I CCNGG 1 cut(s) 100
BmrFI CCNGG 1 cut(s) 100
BpuMI CCSGG 1 cut(s) 100
BsaAI YACGTR 1 cut(s) 16
BsaI GGTCTC 1 cut(s) 64
BsaJI CCNNGG 2 cut(s) 74, 188
Bsc4I CCNNNNNNNGG 1 cut(s) 17
BseDI CCNNGG 2 cut(s) 74, 188
BseLI CCNNNNNNNGG 1 cut(s) 17
BseSI GKGCMC 1 cut(s) 23
BseXI GCAGC 1 cut(s) 182
BshFI GGCC 2 cut(s) 90, 165
BsiSI CCGG 1 cut(s) 99
BslI CCNNNNNNNGG 1 cut(s) 17
BsmAI GTCTC 1 cut(s) 64
BsnI GGCC 2 cut(s) 90, 165
Bso31I GGTCTC 1 cut(s) 64
Bsp1286I GDGCHC 1 cut(s) 23
Bsp19I CCATGG 1 cut(s) 74
BspANI GGCC 2 cut(s) 90, 165
BspTNI GGTCTC 1 cut(s) 64
BssECI CCNNGG 2 cut(s) 74, 188
BssNAI GTATAC 1 cut(s) 105
BssT1I CCWWGG 2 cut(s) 74, 188
Bst1107I GTATAC 1 cut(s) 105
Bst4CI ACNGT 2 cut(s) 134, 151
BstBAI YACGTR 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 163
BstDSI CCRYGG 1 cut(s) 74
BstMAI GTCTC 1 cut(s) 64
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstSCI CCNGG 1 cut(s) 98
BstSFI CTRYAG 1 cut(s) 174
BstSLI GKGCMC 1 cut(s) 23
BstV1I GCAGC 1 cut(s) 182
BstZ17I GTATAC 1 cut(s) 105
BsuRI GGCC 2 cut(s) 90, 165
BtgI CCRYGG 1 cut(s) 74
BtsIMutI CAGTG 1 cut(s) 21
Cac8I GCNNGC 1 cut(s) 163
Csp6I GTAC 2 cut(s) 130, 181
CviAII CATG 2 cut(s) 75, 205
CviJI RGCY 5 cut(s) 90, 161, 165, 173, 220
CviKI_1 RGCY 5 cut(s) 90, 161, 165, 173, 220
CviQI GTAC 2 cut(s) 130, 181
EaeI YGGCCR 2 cut(s) 88, 163
Eco130I CCWWGG 2 cut(s) 74, 188
Eco31I GGTCTC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 45
EcoT14I CCWWGG 2 cut(s) 74, 188
ErhI CCWWGG 2 cut(s) 74, 188
FaeI CATG 2 cut(s) 78, 208
FatI CATG 2 cut(s) 74, 204
FauNDI CATATG 1 cut(s) 142
FblI GTMKAC 1 cut(s) 104
Fnu4HI GCNGC 1 cut(s) 171
Fsp4HI GCNGC 1 cut(s) 171
FspBI CTAG 1 cut(s) 189
GluI GCNGC 1 cut(s) 171
HaeIII GGCC 2 cut(s) 90, 165
HapII CCGG 1 cut(s) 99
Hin1II CATG 2 cut(s) 78, 208
HpaII CCGG 1 cut(s) 99
Hpy166II GTNNAC 1 cut(s) 105
Hpy8I GTNNAC 1 cut(s) 105
HpyAV CCTTC 1 cut(s) 148
HpyCH4III ACNGT 2 cut(s) 134, 151
HpyCH4IV ACGT 1 cut(s) 15
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 2 cut(s) 78, 208
LmnI GCTCC 1 cut(s) 158
LpnPI CCDG 2 cut(s) 112, 147
Lsp1109I GCAGC 1 cut(s) 182
MaeI CTAG 1 cut(s) 189
MaeII ACGT 1 cut(s) 15
MboII GAAGA 1 cut(s) 38
MhlI GDGCHC 1 cut(s) 23
MlsI TGGCCA 2 cut(s) 90, 165
MluCI AATT 1 cut(s) 46
MluNI TGGCCA 2 cut(s) 90, 165
Mox20I TGGCCA 2 cut(s) 90, 165
MroXI GAANNNNTTC 1 cut(s) 198
MscI TGGCCA 2 cut(s) 90, 165
Msp20I TGGCCA 2 cut(s) 90, 165
MspI CCGG 1 cut(s) 99
MspR9I CCNGG 1 cut(s) 100
MwoI GCNNNNNNNGC 1 cut(s) 167
NciI CCSGG 1 cut(s) 100
NcoI CCATGG 1 cut(s) 74
NdeI CATATG 1 cut(s) 142
NlaIII CATG 2 cut(s) 78, 208
PdmI GAANNNNTTC 1 cut(s) 198
PkrI GCNGC 1 cut(s) 172
Ppu21I YACGTR 1 cut(s) 16
RsaI GTAC 2 cut(s) 131, 182
RsaNI GTAC 2 cut(s) 130, 181
SatI GCNGC 1 cut(s) 171
ScrFI CCNGG 1 cut(s) 100
SduI GDGCHC 1 cut(s) 23
SetI ASST 4 cut(s) 18, 163, 175, 218
SfcI CTRYAG 1 cut(s) 174
Sse9I AATT 1 cut(s) 46
SspMI CTAG 1 cut(s) 189
StyD4I CCNGG 1 cut(s) 98
StyI CCWWGG 2 cut(s) 74, 188
TaaI ACNGT 2 cut(s) 134, 151
TaiI ACGT 1 cut(s) 18
TasI AATT 1 cut(s) 46
TatI WGTACW 1 cut(s) 180
TscAI CASTG 1 cut(s) 28
TseI GCWGC 1 cut(s) 170
TspDTI ATGAA 1 cut(s) 213
TspRI CASTG 1 cut(s) 28
XapI RAATTY 1 cut(s) 46
XmaJI CCTAGG 1 cut(s) 188
XmiI GTMKAC 1 cut(s) 104
XmnI GAANNNNTTC 1 cut(s) 198
XspI CTAG 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.