AT3G12240

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000102
Physical Location & Seq
Reverse (-)
3902254 .. 3904992
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G12240.1

Sequence Viewer

Length: 1311 bp
ATGGCTTCCTGGATATTCAAGTTGCTGCTGCTGCTGCAATGTGTGCTTGTGTTGATTCAACATGCTGATTCAAGTTCTATCATCAGATATCTTCCTGGTTTTGAAGGCCCTCTTCCATTCGAGCTCGAAACCGGGTATATTGGTGTTGGTCAAAAAGAGGAAGATCAACTGTTCTACTACTTCATCAAATCTGAGAACAATCCAGAAGAAGACCCTCTTCTTGTCTGGTTAACTGGAGGACCTGGCTGCTCTTCTTTCTCTGGTCTTGTTTATGAGAATGGGCCACTTGCTTTCAAGGTTGAGACTTACAATGGAAGTGTACCGACGTTGGTTTCTACCACATATTCATGGACTAAGGTGGCGAACATAATATATTTGGATCAGCCTGTTGGGACTGGCTTCTCCTACTCAAGAAATCCATTTGCTGATATACCAAGTGACACAGGATCAGTTAAGCGGGTCAACGAGTTTGTTCGTAAGTGGCTAGCTAAGCATCCTGAGTATTTCTCCAATCCTTTCTATGTCACTGGAAATTCTTATTCCGGTAAGGTGATTCCGGCCATCGTTCAAGAAATCTCAAATGGAAACTATATATGCTGCAAACCTCAAATAAATCTTCAGGGCTATGTGATCGGAAACCCGGTAGCATACTATGATCATGATAAAGACTTTCGCATTCCATTTGCTCATGGAGTAGCACTCATCTCTGATGAACTCTTTGAGTCGTTGAAGGCAAGTTGTGGAGGAAGCTACAGTGTTGTAGATCCTCTTAACACAGAATGCTTGAAACTCATCGAAGATTATGACAAGTGTGTTTCTGGAATATATGAAGAACTTATTCTAAAATCAAAATGCGAGCACACATCTCCTGATTGTTATACGTATCGGTATTTGCTATCTGAATATTGGGCTGATAACGAGACTGTCCGCAGAGCACTCAAAGTTGTGAAGGGGAGTAAAGGGACATGGGAACGATGCGATTATAGAGTGCTTAGCAACCAAGACATCAAAAGCAGCATACCATTCCATATCAATAACAGCATCAGAGGATATCGATCTCTAGTCATTAGCGGTGATCACGATATGACAATCCCTTTCCTTGGAACTCAAGCATGGATAAGATCTCTCAACTATTCCATTACTGAAAAATGGAGACCTTGGATGATACTCGACCAAGTCGCCGGATACACCAAGACTTATGCCAATAAGATGACACTTGCCACTGTGAAAGGAGGTGGGCACACATTGGAATATAAACCAGAGGAGAACTCAGTCTTGTTCAAGAGGTGGATAAGTGGTCAACCTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016740 GO:0016746 GO:0016747 GO:0016752 GO:0019748
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

436

Amino Acids

49.35

Weight (kDa)

5.83

Isoelectric Point (pI)

33.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 32 - 433 4.6e-128 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 457, 928, 1071
AclWI GGATC 3 cut(s) 387, 454, 758
AcoI YGGCCR 1 cut(s) 558
AcsI RAATTY 1 cut(s) 532
AcuI CTGAAG 1 cut(s) 602
AfaI GTAC 1 cut(s) 321
AfiI CCNNNNNNNGG 1 cut(s) 1100
AgsI TTSAA 9 cut(s) 19, 59, 72, 104, 295, 569, 730, 787, 1282
AjnI CCWGG 3 cut(s) 8, 94, 241
AluBI AGCT 3 cut(s) 124, 488, 750
AluI AGCT 3 cut(s) 124, 488, 750
Alw21I GWGCWC 3 cut(s) 126, 861, 937
Alw26I GTCTC 3 cut(s) 296, 914, 1147
AlwI GGATC 3 cut(s) 387, 454, 758
AoxI GGCC 3 cut(s) 106, 281, 558
ApeKI GCWGC 7 cut(s) 25, 28, 31, 34, 246, 597, 1014
ApoI RAATTY 1 cut(s) 532
Asp700I GAANNNNTTC 1 cut(s) 837
AspS9I GGNCC 3 cut(s) 107, 239, 281
AsuC2I CCSGG 2 cut(s) 133, 641
AsuHPI GGTGA 2 cut(s) 562, 1085
AsuNHI GCTAGC 1 cut(s) 484
AvaII GGWCC 1 cut(s) 239
BaeGI GKGCMC 1 cut(s) 1242
BanII GRGCYC 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 216
Bbv12I GWGCWC 3 cut(s) 126, 861, 937
BbvI GCAGC 7 cut(s) 12, 15, 18, 21, 233, 584, 1026
BccI CCATC 1 cut(s) 569
BciT130I CCWGG 3 cut(s) 10, 96, 243
BciVI GTATCC 1 cut(s) 1178
BclI TGATCA 2 cut(s) 655, 1075
BcnI CCSGG 2 cut(s) 133, 641
BcoDI GTCTC 3 cut(s) 296, 914, 1147
BfaI CTAG 2 cut(s) 485, 1061
BfmI CTRYAG 1 cut(s) 751
BfuI GTATCC 1 cut(s) 1178
BglII AGATCT 1 cut(s) 1121
BisI GCNGC 7 cut(s) 26, 29, 32, 35, 247, 598, 1015
BlpI GCTNAGC 2 cut(s) 489, 992
BlsI GCNGC 7 cut(s) 27, 30, 33, 36, 248, 599, 1016
Bme1390I CCNGG 5 cut(s) 10, 96, 133, 243, 641
Bme18I GGWCC 1 cut(s) 239
BmgT120I GGNCC 3 cut(s) 107, 239, 281
BmrFI CCNGG 5 cut(s) 10, 96, 133, 243, 641
BmsI GCATC 3 cut(s) 502, 965, 1050
BmtI GCTAGC 1 cut(s) 488
BpiI GAAGAC 1 cut(s) 216
BplI GAGNNNNNCTC 6 cut(s) 491, 523, 684, 716, 1253, 1285
BpmI CTGGAG 1 cut(s) 255
Bpu1102I GCTNAGC 2 cut(s) 489, 992
BpuEI CTTGAG 2 cut(s) 394, 1092
BpuMI CCSGG 2 cut(s) 133, 641
Bsa29I ATCGAT 1 cut(s) 1054
BsaAI YACGTR 1 cut(s) 882
BsaBI GATNNNNATC 1 cut(s) 1054
BsaI GGTCTC 1 cut(s) 1147
BsaJI CCNNGG 2 cut(s) 1099, 1157
BsaWI WCCGGW 1 cut(s) 542
Bsc4I CCNNNNNNNGG 1 cut(s) 1100
Bse1I ACTGG 3 cut(s) 238, 400, 532
Bse3DI GCAATG 1 cut(s) 44
Bse8I GATNNNNATC 1 cut(s) 1054
BseBI CCWGG 3 cut(s) 10, 96, 243
BseCI ATCGAT 1 cut(s) 1054
BseDI CCNNGG 2 cut(s) 1099, 1157
BseGI GGATG 2 cut(s) 493, 1167
BseJI GATNNNNATC 1 cut(s) 1054
BseLI CCNNNNNNNGG 1 cut(s) 1100
BseMI GCAATG 1 cut(s) 44
BseMII CTCAG 3 cut(s) 183, 489, 1284
BseNI ACTGG 3 cut(s) 238, 400, 532
BseRI GAGGAG 1 cut(s) 1277
BseSI GKGCMC 1 cut(s) 1242
BseXI GCAGC 7 cut(s) 12, 15, 18, 21, 233, 584, 1026
BshFI GGCC 3 cut(s) 108, 283, 560
BshVI ATCGAT 1 cut(s) 1054
BsiHKAI GWGCWC 3 cut(s) 126, 861, 937
BsiSI CCGG 5 cut(s) 132, 543, 557, 641, 1182
BslFI GGGAC 2 cut(s) 406, 976
BslI CCNNNNNNNGG 1 cut(s) 1100
BsmAI GTCTC 3 cut(s) 296, 914, 1147
BsmFI GGGAC 2 cut(s) 406, 976
BsmI GAATGC 2 cut(s) 675, 785
BsnI GGCC 3 cut(s) 108, 283, 560
Bso31I GGTCTC 1 cut(s) 1147
Bsp1286I GDGCHC 4 cut(s) 126, 861, 937, 1242
Bsp143I GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
Bsp1720I GCTNAGC 2 cut(s) 489, 992
BspACI CCGC 3 cut(s) 457, 928, 1071
BspANI GGCC 3 cut(s) 108, 283, 560
BspCNI CTCAG 3 cut(s) 184, 490, 1283
BspDI ATCGAT 1 cut(s) 1054
BspHI TCATGA 1 cut(s) 658
BspOI GCTAGC 1 cut(s) 488
BspPI GGATC 3 cut(s) 387, 454, 758
BspQI GCTCTTC 1 cut(s) 256
BspTNI GGTCTC 1 cut(s) 1147
BsrDI GCAATG 1 cut(s) 44
BsrI ACTGG 3 cut(s) 238, 400, 532
BssECI CCNNGG 2 cut(s) 1099, 1157
BssMI GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
BssT1I CCWWGG 2 cut(s) 1099, 1157
Bst2UI CCWGG 3 cut(s) 10, 96, 243
Bst4CI ACNGT 4 cut(s) 171, 755, 925, 1225
Bst6I CTCTTC 3 cut(s) 117, 222, 256
BstAPI GCANNNNNTGC 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 882
BstC8I GCNNGC 2 cut(s) 486, 857
BstDEI CTNAG 6 cut(s) 192, 354, 489, 498, 992, 1270
BstF5I GGATG 2 cut(s) 493, 1167
BstKTI GATC 9 cut(s) 166, 382, 449, 633, 658, 766, 1058, 1078, 1124
BstMAI GTCTC 3 cut(s) 296, 914, 1147
BstMBI GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
BstMWI GCNNNNNNNGC 4 cut(s) 31, 34, 43, 490
BstNI CCWGG 3 cut(s) 10, 96, 243
BstNSI RCATGY 1 cut(s) 65
BstSCI CCNGG 5 cut(s) 8, 94, 131, 241, 639
BstSFI CTRYAG 1 cut(s) 751
BstSLI GKGCMC 1 cut(s) 1242
BstSNI TACGTA 1 cut(s) 882
BstV1I GCAGC 7 cut(s) 12, 15, 18, 21, 233, 584, 1026
BstV2I GAAGAC 1 cut(s) 216
BstX2I RGATCY 2 cut(s) 763, 1121
BstYI RGATCY 2 cut(s) 763, 1121
Bsu15I ATCGAT 1 cut(s) 1054
BsuI GTATCC 1 cut(s) 1178
BsuRI GGCC 3 cut(s) 108, 283, 560
BsuTUI ATCGAT 1 cut(s) 1054
BtsCI GGATG 2 cut(s) 493, 1167
BtsIMutI CAGTG 3 cut(s) 525, 760, 1221
Cac8I GCNNGC 2 cut(s) 486, 857
CciI TCATGA 1 cut(s) 658
Cfr13I GGNCC 3 cut(s) 107, 239, 281
ClaI ATCGAT 1 cut(s) 1054
Csp6I GTAC 1 cut(s) 320
CviAII CATG 6 cut(s) 62, 348, 659, 689, 966, 1113
CviQI GTAC 1 cut(s) 320
DdeI CTNAG 6 cut(s) 192, 354, 489, 498, 992, 1270
DpnI GATC 9 cut(s) 165, 381, 448, 632, 657, 765, 1057, 1077, 1123
DpnII GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
EaeI YGGCCR 1 cut(s) 558
Eam1104I CTCTTC 3 cut(s) 117, 222, 256
EarI CTCTTC 3 cut(s) 117, 222, 256
Ecl136II GAGCTC 1 cut(s) 124
Eco105I TACGTA 1 cut(s) 882
Eco130I CCWWGG 2 cut(s) 1099, 1157
Eco24I GRGCYC 1 cut(s) 126
Eco31I GGTCTC 1 cut(s) 1147
Eco32I GATATC 2 cut(s) 89, 1052
Eco47I GGWCC 1 cut(s) 239
Eco53kI GAGCTC 1 cut(s) 124
Eco57I CTGAAG 1 cut(s) 602
EcoICRI GAGCTC 1 cut(s) 124
EcoO109I RGGNCCY 2 cut(s) 107, 239
EcoRII CCWGG 3 cut(s) 8, 94, 241
EcoRV GATATC 2 cut(s) 89, 1052
EcoT14I CCWWGG 2 cut(s) 1099, 1157
EcoT38I GRGCYC 1 cut(s) 126
ErhI CCWWGG 2 cut(s) 1099, 1157
FaeI CATG 6 cut(s) 65, 351, 662, 692, 969, 1116
FalI AAGNNNNNCTT 4 cut(s) 96, 128, 201, 233
FaqI GGGAC 2 cut(s) 406, 976
FatI CATG 6 cut(s) 61, 347, 658, 688, 965, 1112
FauI CCCGC 1 cut(s) 450
FbaI TGATCA 2 cut(s) 655, 1075
Fnu4HI GCNGC 7 cut(s) 26, 29, 32, 35, 247, 598, 1015
FokI GGATG 2 cut(s) 480, 1174
FriOI GRGCYC 1 cut(s) 126
Fsp4HI GCNGC 7 cut(s) 26, 29, 32, 35, 247, 598, 1015
FspBI CTAG 2 cut(s) 485, 1061
GluI GCNGC 7 cut(s) 26, 29, 32, 35, 247, 598, 1015
GsuI CTGGAG 1 cut(s) 255
HaeIII GGCC 3 cut(s) 108, 283, 560
HapII CCGG 5 cut(s) 132, 543, 557, 641, 1182
Hin1II CATG 6 cut(s) 65, 351, 662, 692, 969, 1116
HincII GTYRAC 3 cut(s) 231, 463, 1301
HindII GTYRAC 3 cut(s) 231, 463, 1301
HinfI GANTC 4 cut(s) 55, 68, 553, 722
HpaI GTTAAC 1 cut(s) 231
HpaII CCGG 5 cut(s) 132, 543, 557, 641, 1182
HphI GGTGA 2 cut(s) 562, 1085
Hpy166II GTNNAC 4 cut(s) 231, 320, 463, 1301
Hpy188I TCNGA 6 cut(s) 86, 193, 635, 709, 901, 1046
Hpy188III TCNNGA 9 cut(s) 203, 411, 497, 569, 659, 819, 869, 1079, 1282
Hpy8I GTNNAC 4 cut(s) 231, 320, 463, 1301
Hpy99I CGWCG 1 cut(s) 328
HpyAV CCTTC 3 cut(s) 98, 724, 943
HpyCH4III ACNGT 4 cut(s) 171, 755, 925, 1225
HpyCH4IV ACGT 2 cut(s) 326, 881
HpyCH4V TGCA 2 cut(s) 37, 600
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 34, 43, 490
HpyF3I CTNAG 6 cut(s) 192, 354, 489, 498, 992, 1270
HpySE526I ACGT 2 cut(s) 326, 881
Hsp92II CATG 6 cut(s) 65, 351, 662, 692, 969, 1116
Ksp22I TGATCA 2 cut(s) 655, 1075
KspAI GTTAAC 1 cut(s) 231
Kzo9I GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
LguI GCTCTTC 1 cut(s) 256
Lsp1109I GCAGC 7 cut(s) 12, 15, 18, 21, 233, 584, 1026
LweI GCATC 3 cut(s) 502, 965, 1050
MaeI CTAG 2 cut(s) 485, 1061
MaeII ACGT 2 cut(s) 326, 881
MaeIII GTNAC 2 cut(s) 437, 523
MalI GATC 9 cut(s) 165, 381, 448, 632, 657, 765, 1057, 1077, 1123
MboI GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
MflI RGATCY 2 cut(s) 763, 1121
MhlI GDGCHC 4 cut(s) 126, 861, 937, 1242
MluCI AATT 1 cut(s) 532
MlyI GAGTC 1 cut(s) 731
MroXI GAANNNNTTC 1 cut(s) 837
MseI TTAA 4 cut(s) 230, 453, 771, 1309
MslI CAYNNNNRTG 1 cut(s) 346
MspI CCGG 5 cut(s) 132, 543, 557, 641, 1182
MspR9I CCNGG 5 cut(s) 10, 96, 133, 243, 641
Mva1269I GAATGC 2 cut(s) 675, 785
MvaI CCWGG 3 cut(s) 10, 96, 243
MwoI GCNNNNNNNGC 4 cut(s) 31, 34, 43, 490
NciI CCSGG 2 cut(s) 133, 641
NdeII GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
NheI GCTAGC 1 cut(s) 484
NlaIII CATG 6 cut(s) 65, 351, 662, 692, 969, 1116
NmuCI GTSAC 2 cut(s) 437, 523
NspI RCATGY 1 cut(s) 65
PagI TCATGA 1 cut(s) 658
PciSI GCTCTTC 1 cut(s) 256
PctI GAATGC 2 cut(s) 675, 785
PdmI GAANNNNTTC 1 cut(s) 837
PfeI GAWTC 3 cut(s) 55, 68, 553
PflFI GACNNNGTC 1 cut(s) 1175
PfoI TCCNGGA 1 cut(s) 8
PkrI GCNGC 7 cut(s) 27, 30, 33, 36, 248, 599, 1016
PleI GAGTC 1 cut(s) 730
PpsI GAGTC 1 cut(s) 730
Ppu21I YACGTR 1 cut(s) 882
PpuMI RGGWCCY 1 cut(s) 239
Psp124BI GAGCTC 1 cut(s) 126
Psp5II RGGWCCY 1 cut(s) 239
Psp6I CCWGG 3 cut(s) 8, 94, 241
PspGI CCWGG 3 cut(s) 8, 94, 241
PspPI GGNCC 3 cut(s) 107, 239, 281
PspPPI RGGWCCY 1 cut(s) 239
PsuI RGATCY 2 cut(s) 763, 1121
PsyI GACNNNGTC 1 cut(s) 1175
RsaI GTAC 1 cut(s) 321
RsaNI GTAC 1 cut(s) 320
RseI CAYNNNNRTG 1 cut(s) 346
SacI GAGCTC 1 cut(s) 126
SapI GCTCTTC 1 cut(s) 256
SaqAI TTAA 4 cut(s) 230, 453, 771, 1309
SatI GCNGC 7 cut(s) 26, 29, 32, 35, 247, 598, 1015
Sau3AI GATC 9 cut(s) 163, 379, 446, 630, 655, 763, 1055, 1075, 1121
Sau96I GGNCC 3 cut(s) 107, 239, 281
SchI GAGTC 1 cut(s) 731
ScrFI CCNGG 5 cut(s) 10, 96, 133, 243, 641
SduI GDGCHC 4 cut(s) 126, 861, 937, 1242
SfaNI GCATC 3 cut(s) 502, 965, 1050
SfcI CTRYAG 1 cut(s) 751
SinI GGWCC 1 cut(s) 239
SmiMI CAYNNNNRTG 1 cut(s) 346
SmlI CTYRAG 2 cut(s) 409, 1107
SmoI CTYRAG 2 cut(s) 409, 1107
SnaBI TACGTA 1 cut(s) 882
Sse9I AATT 1 cut(s) 532
SsiI CCGC 3 cut(s) 457, 928, 1071
SspI AATATT 1 cut(s) 905
SspMI CTAG 2 cut(s) 485, 1061
SstI GAGCTC 1 cut(s) 126
StyD4I CCNGG 5 cut(s) 8, 94, 131, 241, 639
StyI CCWWGG 2 cut(s) 1099, 1157
TaaI ACNGT 4 cut(s) 171, 755, 925, 1225
TaiI ACGT 2 cut(s) 329, 884
TaqI TCGA 5 cut(s) 120, 126, 795, 1054, 1170
TasI AATT 1 cut(s) 532
TfiI GAWTC 3 cut(s) 55, 68, 553
Tru1I TTAA 4 cut(s) 230, 453, 771, 1309
Tru9I TTAA 4 cut(s) 230, 453, 771, 1309
TscAI CASTG 3 cut(s) 532, 760, 1228
TseFI GTSAC 2 cut(s) 437, 523
TseI GCWGC 7 cut(s) 25, 28, 31, 34, 246, 597, 1014
Tsp45I GTSAC 2 cut(s) 437, 523
TspDTI ATGAA 4 cut(s) 172, 336, 726, 843
TspRI CASTG 3 cut(s) 532, 760, 1228
Tth111I GACNNNGTC 1 cut(s) 1175
VpaK11BI GGWCC 1 cut(s) 239
XapI RAATTY 1 cut(s) 532
XceI RCATGY 1 cut(s) 65
XmnI GAANNNNTTC 1 cut(s) 837
XspI CTAG 2 cut(s) 485, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.