Rh2CG650900

Exportin 1-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
81881953 .. 81885106
3154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG650900.1

Sequence Viewer

Length: 543 bp
ATGCATCGTGGAGCAGCACTTGCATCCATGTCATACTTATCTTGTTTTTTGGAGGTGAGCCTGGCGTCTTTGTTGGATTCCATGTCTTGTATTCCTGAAGGGTCATTCAGTGCAATGGCCATTCAAGTCATATCCCACAGTGGGGAGGGACTTGTATCAAATCTGGTTTATGCTTTACTTGGAGTTTCAGCAATGTCACGGGTTCACAAATGTGCCACTATTTTGCAACAATTGGCAGCAATATGCAGTTTAAGTGAGAGCACAACCGGCAAGGCTATTCTTTGTTGGGAATCTTTGCATGGATGGTTGCAGTCAGCGGTCCAGGCTCTTCCTGCTGAATACCTGAAGCAAGGGGAACTTGAAACTTTAGTGCCGGTTTGGTCTAAGGCCCTTGCCGGTGCAGCCTCAGATTATATCCAGAGCAGAAGTTGTGATGGAGGGCATAACAATTATGGTCACATGCAAGGGAAAGGTGGAAGAGTTTTGAAGCGTTTAGTCCGTGAATTTGCTGATAGCCACCGCAATATTCCAAACTTGACTTGA

Protein Analysis

180

Amino Acids

19.25

Weight (kDa)

7.03

Isoelectric Point (pI)

60.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33540 AT1G33540 AT1G73270 AT1G73270 AT1G73280 AT1G73280 AT1G73280 AT1G73280 AT1G73290 AT1G73290 AT1G73290 AT1G73300 AT1G73300 AT1G73310 AT1G73310 AT1G73310 AT2G22920 AT2G22920 AT2G22920 AT2G22920 AT2G22960 AT2G22970 AT2G22970 AT2G22970 AT2G22970 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22980 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G22990 AT2G23000 AT2G23000 AT2G23010 AT2G23010 AT3G10450 AT3G10450 AT3G10450 AT3G10450 AT3G12203 AT3G12203 AT3G12203 AT3G12220 AT3G12220 AT3G12220 AT3G12230 AT3G12240 AT5G09640 AT5G36180 AT5G36180 AT5G36180 AT5G36180 AT5G36180
fragaria_vesca FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_1g17970 FvH4_2g03550 FvH4_2g03550 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03560 FvH4_2g03570 FvH4_2g03570 FvH4_2g03570 FvH4_2g32860 FvH4_2g32860 FvH4_2g32860 FvH4_6g45780
malus_domestica MD05G1102900.v1.1 MD05G1103100.v1.1 MD05G1103400.v1.1 MD05G1103600.v1.1 MD15G1067200.v1.1 MD15G1299100.v1.1 MD15G1299200.v1.1
prunus_persica Prupe.6G218600_v2.0.a1 Prupe.6G218800_v2.0.a1 Prupe.8G129900_v2.0.a1 Prupe.8G130000_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G135600_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147500_v2.0.a1 Prupe.8G147600_v2.0.a1 Prupe.8G147700_v2.0.a1 Prupe.8G147800_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G147900_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148000_v2.0.a1 Prupe.8G148300_v2.0.a1
pyrus_communis pycom05g10060 pycom08g20430 pycom10g09380 pycom15g06370
rosa_chinensis RchiOBHm_Chr2g0108421 RchiOBHm_Chr2g0155051 RchiOBHm_Chr2g0176791 RchiOBHm_Chr5g0035721 RchiOBHm_Chr5g0035731 RchiOBHm_Chr5g0043261 RchiOBHm_Chr6g0249011 RchiOBHm_Chr6g0249021 RchiOBHm_Chr6g0249041 RchiOBHm_Chr6g0249051 RchiOBHm_Chr6g0249071 RchiOBHm_Chr6g0249091 RchiOBHm_Chr6g0249111 RchiOBHm_Chr6g0249131 RchiOBHm_Chr6g0249151 RchiOBHm_Chr6g0252461 RchiOBHm_Chr6g0252481 RchiOBHm_Chr6g0252491
rosa_laevigata RLG00000001434 RLG00000015094 RLG00000015095 RLG00000015096 RLG00000015099 RLG00000015101 RLG00000015103 RLG00000017668
rosa_multiflora Rmu_co7960301.1_g000001 Rmu_co8316227.1_g000001 Rmu_co8338197.1_g000001 Rmu_co8348961.1_g000001 Rmu_sc0000290.1_g000001 Rmu_sc0000290.1_g000008 Rmu_sc0001762.1_g000019 Rmu_sc0001762.1_g000023 Rmu_sc0002016.1_g000008 Rmu_sc0002016.1_g000013 Rmu_sc0002016.1_g000016 Rmu_sc0002372.1_g000025 Rmu_sc0003692.1_g000002 Rmu_sc0003692.1_g000012 Rmu_sc0003780.1_g000008 Rmu_sc0003829.1_g000040 Rmu_sc0004823.1_g000035 Rmu_sc0004832.1_g000025 Rmu_sc0006782.1_g000011 Rmu_sc0006782.1_g000015 Rmu_sc0007382.1_g000001 Rmu_sc0009208.1_g000009 Rmu_sc0017474.1_g000001 Rmu_sc0026593.1_g000002 Rmu_sc0028609.1_g000001 Rmu_ssc0000007.1_g000002
rosa_roxburghii Rroxscaffold_1G00023310 Rroxscaffold_2G00135160 Rroxscaffold_2G00135410 Rroxscaffold_7G00212680 Rroxscaffold_7G00212690 Rroxscaffold_7G00212710 Rroxscaffold_7G00212730 Rroxscaffold_7G00212740 Rroxscaffold_7G00212770 Rroxscaffold_7G00212780
rosa_rugosa Rorug02G0152900 Rorug02G0153000 Rorug02G0153100 Rorug02G0153200 Rorug02G0153300 Rorug03G0171900 Rorug04G0031100 Rorug04G0031100 Rorug04G0031100 Rorug05G0033600 Rorug05G0033700 Rorug05G0033700 Rorug05G0534900 Rorug05G0534900 Rorug05G0535000 Rorug05G0535100 Rorug05G0535200 Rorug05G0535300 Rorug05G0535400.1 Rorug05G0535500.1 Rorug05G0535600 Rorug05G0535700 Rorug05G0535900 Rorug05G0536000.1 Rorug05G0536100.1 Rorug05G0536200 Rorug05G0536200 Rorug05G0536300 Rorug06G0002300
rosa_samantha Rh1AG086800 Rh1BG137200 Rh2AG201800 Rh2BG214700 Rh2CG205900 Rh2CG650900 Rh2DG209100 Rh2DG683600 Rh2DG701600 Rh4DG048600 Rh5BG257100 Rh5BG296800 Rh5DG266200 Rh5DG306500 Rh6AG052300 Rh6AG052500 Rh6BG009400 Rh6BG045800 Rh6BG046000 Rh6BG046100 Rh6BG046300 Rh6BG046400 Rh6BG046500 Rh6CG044400 Rh6CG044500 Rh6CG044600 Rh6CG044900 Rh6CG045100 Rh6CG045200 Rh6CG178800 Rh6DG039600 Rh6DG039800 Rh6DG040100 Rh6DG040600 Rh6DG040800 Rh6DG040900 Rh7AG465600 Rh7CG509300 Rh7DG476900
rosa_wichuraiana Rw0G003830 Rw1G008040 Rw2G016060 Rw2G016130 Rw2G053970 Rw4G021320 Rw6G004520 Rw6G004560 Rw6G004640 Rw6G004660 Rw6G004670 Rw6G004680 Rw6G004700 Rw6G004720 Rw6G004730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 317, 520
AcoI YGGCCR 1 cut(s) 117
AcsI RAATTY 1 cut(s) 503
AcuI CTGAAG 2 cut(s) 117, 365
AcyI GRCGYC 1 cut(s) 65
AfiI CCNNNNNNNGG 2 cut(s) 141, 142
AgsI TTSAA 3 cut(s) 125, 362, 487
AjnI CCWGG 2 cut(s) 60, 321
AleI CACNNNNGTG 1 cut(s) 210
Alw21I GWGCWC 1 cut(s) 263
AoxI GGCC 2 cut(s) 117, 387
ApeKI GCWGC 3 cut(s) 14, 236, 401
ApoI RAATTY 1 cut(s) 503
AspS9I GGNCC 2 cut(s) 319, 388
AsuHPI GGTGA 1 cut(s) 67
AvaII GGWCC 1 cut(s) 319
BalI TGGCCA 1 cut(s) 119
Bbv12I GWGCWC 1 cut(s) 263
BbvI GCAGC 3 cut(s) 26, 248, 413
BccI CCATC 2 cut(s) 297, 428
BciT130I CCWGG 2 cut(s) 62, 323
BisI GCNGC 3 cut(s) 15, 237, 402
BlsI GCNGC 3 cut(s) 16, 238, 403
Bme1390I CCNGG 2 cut(s) 62, 323
Bme18I GGWCC 1 cut(s) 319
BmgT120I GGNCC 2 cut(s) 319, 388
BmrFI CCNGG 2 cut(s) 62, 323
BmsI GCATC 2 cut(s) 13, 32
BsaHI GRCGYC 1 cut(s) 65
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 142
Bse118I RCCGGY 3 cut(s) 266, 373, 395
Bse3DI GCAATG 2 cut(s) 120, 198
BseBI CCWGG 2 cut(s) 62, 323
BseGI GGATG 2 cut(s) 23, 308
BseLI CCNNNNNNNGG 2 cut(s) 141, 142
BseMI GCAATG 2 cut(s) 120, 198
BseMII CTCAG 1 cut(s) 420
BseXI GCAGC 3 cut(s) 26, 248, 413
BsgI GTGCAG 1 cut(s) 420
BshFI GGCC 2 cut(s) 119, 389
BsiHKAI GWGCWC 1 cut(s) 263
BsiSI CCGG 3 cut(s) 267, 374, 396
BslFI GGGAC 1 cut(s) 162
BslI CCNNNNNNNGG 2 cut(s) 141, 142
BsmFI GGGAC 1 cut(s) 162
BsnI GGCC 2 cut(s) 119, 389
Bsp1286I GDGCHC 1 cut(s) 263
BspACI CCGC 2 cut(s) 317, 520
BspANI GGCC 2 cut(s) 119, 389
BspCNI CTCAG 1 cut(s) 419
BspQI GCTCTTC 1 cut(s) 333
BsrDI GCAATG 2 cut(s) 120, 198
BsrFI RCCGGY 3 cut(s) 266, 373, 395
BssAI RCCGGY 3 cut(s) 266, 373, 395
BssNI GRCGYC 1 cut(s) 65
Bst2UI CCWGG 2 cut(s) 62, 323
Bst4CI ACNGT 1 cut(s) 140
Bst6I CTCTTC 2 cut(s) 333, 472
BstACI GRCGYC 1 cut(s) 65
BstAPI GCANNNNNTGC 1 cut(s) 20
BstDEI CTNAG 2 cut(s) 384, 406
BstF5I GGATG 2 cut(s) 23, 308
BstMWI GCNNNNNNNGC 5 cut(s) 20, 267, 323, 332, 401
BstNI CCWGG 2 cut(s) 62, 323
BstNSI RCATGY 1 cut(s) 463
BstSCI CCNGG 2 cut(s) 60, 321
BstV1I GCAGC 3 cut(s) 26, 248, 413
BsuRI GGCC 2 cut(s) 119, 389
BtsCI GGATG 2 cut(s) 23, 308
BtsIMutI CAGTG 2 cut(s) 115, 145
Cfr10I RCCGGY 3 cut(s) 266, 373, 395
Cfr13I GGNCC 2 cut(s) 319, 388
CseI GACGC 1 cut(s) 54
CviAII CATG 4 cut(s) 28, 82, 299, 460
CviJI RGCY 7 cut(s) 60, 119, 275, 326, 389, 404, 516
CviKI_1 RGCY 7 cut(s) 60, 119, 275, 326, 389, 404, 516
DdeI CTNAG 2 cut(s) 384, 406
EaeI YGGCCR 1 cut(s) 117
Eam1104I CTCTTC 2 cut(s) 333, 472
EarI CTCTTC 2 cut(s) 333, 472
Eco47I GGWCC 1 cut(s) 319
Eco57I CTGAAG 2 cut(s) 117, 365
EcoO109I RGGNCCY 1 cut(s) 388
EcoRII CCWGG 2 cut(s) 60, 321
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 4 cut(s) 31, 85, 302, 463
FalI AAGNNNNNCTT 2 cut(s) 342, 374
FaqI GGGAC 1 cut(s) 162
FatI CATG 4 cut(s) 27, 81, 298, 459
Fnu4HI GCNGC 3 cut(s) 15, 237, 402
FokI GGATG 2 cut(s) 10, 315
Fsp4HI GCNGC 3 cut(s) 15, 237, 402
GluI GCNGC 3 cut(s) 15, 237, 402
HaeIII GGCC 2 cut(s) 119, 389
HapII CCGG 3 cut(s) 267, 374, 396
HgaI GACGC 1 cut(s) 54
Hin1I GRCGYC 1 cut(s) 65
Hin1II CATG 4 cut(s) 31, 85, 302, 463
HinfI GANTC 2 cut(s) 77, 290
HpaII CCGG 3 cut(s) 267, 374, 396
HphI GGTGA 1 cut(s) 67
Hpy166II GTNNAC 1 cut(s) 205
Hpy188I TCNGA 1 cut(s) 409
Hpy188III TCNNGA 2 cut(s) 95, 418
Hpy8I GTNNAC 1 cut(s) 205
HpyAV CCTTC 1 cut(s) 92
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4V TGCA 9 cut(s) 4, 23, 113, 226, 246, 298, 310, 401, 463
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 267, 323, 332, 401
HpyF3I CTNAG 2 cut(s) 384, 406
Hsp92I GRCGYC 1 cut(s) 65
Hsp92II CATG 4 cut(s) 31, 85, 302, 463
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 1 cut(s) 11
Lsp1109I GCAGC 3 cut(s) 26, 248, 413
LweI GCATC 2 cut(s) 13, 32
MaeIII GTNAC 2 cut(s) 195, 455
MboII GAAGA 2 cut(s) 320, 489
MfeI CAATTG 1 cut(s) 230
MhlI GDGCHC 1 cut(s) 263
MlsI TGGCCA 1 cut(s) 119
MluCI AATT 3 cut(s) 230, 448, 503
MluNI TGGCCA 1 cut(s) 119
MmeI TCCRAC 1 cut(s) 54
MnlI CCTC 4 cut(s) 46, 139, 415, 431
Mox20I TGGCCA 1 cut(s) 119
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 119
MseI TTAA 1 cut(s) 251
MslI CAYNNNNRTG 1 cut(s) 210
Msp20I TGGCCA 1 cut(s) 119
MspA1I CMGCKG 1 cut(s) 317
MspI CCGG 3 cut(s) 267, 374, 396
MspR9I CCNGG 2 cut(s) 62, 323
MunI CAATTG 1 cut(s) 230
MvaI CCWGG 2 cut(s) 62, 323
MwoI GCNNNNNNNGC 5 cut(s) 20, 267, 323, 332, 401
NlaIII CATG 4 cut(s) 31, 85, 302, 463
NmuCI GTSAC 2 cut(s) 195, 455
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 463
OliI CACNNNNGTG 1 cut(s) 210
PciSI GCTCTTC 1 cut(s) 333
PfeI GAWTC 2 cut(s) 77, 290
PkrI GCNGC 3 cut(s) 16, 238, 403
Psp6I CCWGG 2 cut(s) 60, 321
PspGI CCWGG 2 cut(s) 60, 321
PspPI GGNCC 2 cut(s) 319, 388
RseI CAYNNNNRTG 1 cut(s) 210
SapI GCTCTTC 1 cut(s) 333
SaqAI TTAA 1 cut(s) 251
SatI GCNGC 3 cut(s) 15, 237, 402
Sau96I GGNCC 2 cut(s) 319, 388
ScrFI CCNGG 2 cut(s) 62, 323
SduI GDGCHC 1 cut(s) 263
SetI ASST 3 cut(s) 57, 345, 475
SfaNI GCATC 2 cut(s) 13, 32
SinI GGWCC 1 cut(s) 319
SmiMI CAYNNNNRTG 1 cut(s) 210
Sse9I AATT 3 cut(s) 230, 448, 503
SsiI CCGC 2 cut(s) 317, 520
SspI AATATT 1 cut(s) 526
StyD4I CCNGG 2 cut(s) 60, 321
TaaI ACNGT 1 cut(s) 140
TasI AATT 3 cut(s) 230, 448, 503
TfiI GAWTC 2 cut(s) 77, 290
Tru1I TTAA 1 cut(s) 251
Tru9I TTAA 1 cut(s) 251
TscAI CASTG 2 cut(s) 115, 145
TseFI GTSAC 2 cut(s) 195, 455
TseI GCWGC 3 cut(s) 14, 236, 401
Tsp45I GTSAC 2 cut(s) 195, 455
TspGWI ACGGA 1 cut(s) 488
TspRI CASTG 2 cut(s) 115, 145
VpaK11BI GGWCC 1 cut(s) 319
XapI RAATTY 1 cut(s) 503
XceI RCATGY 1 cut(s) 463
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.