FvH4_5g39742

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000698
Physical Location & Seq
Reverse (-)
29326163 .. 29329345
3183 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g39742.t1

Sequence Viewer

Length: 2580 bp
ATGTCTCTAGTCTCTCGCTCGGTCGCTCCAGACGCTCAGTCCCGAACCTTGCTCTCCAGTCGCTCTCACTCCCTCTCAGTCGCCCTCGCCCAGTCGCTCTCCCTCACCTCGCCGGCTCGCCCTCCCCGCCCTCTTCTCTCGCCCCAGTCAGCTCTCCCTCACCTCGCCGGCTCGCCCTCCCCGCCCTCTTCTCTCGCCCAGTCGCTCTCCCTCACCTCGCCGGCTCGCCCTCCCCGCCCTCTTCTCTCGCCCTCCTCTTTGTTTCTGACTTTCTGGAAAATGGCCGGAACAATGTCTTCTTCTACATCTAATGCAACATCGGAGATGGATAGACGGGAGTCATTGAAGCGCAATTTAAGTGATGTTGGGTGGGAGTACGGGATGTTGATTGATCCAAAGAGATTAGATAGAGTAAAGTGTAAGCTATGTGGGCACGAGATGTCTGGTGGAATTCATCGGTTGAAGCAGCATGTTGTTGGAATCAAGGGCCAAGTGGCACCATGTCCCAAGGCTTCGGCAGAGGCTAAAACCAAATGCAAGAATGCTCTTGCTGAGTCAAAGGTTAAGAAGATTCAAAAGACTGCACATGAAGAAGAAGTGAGGCAAGAAGTTCTTATTCTTGATGGGGCTGAAGATGAGGAAGCAAGTCAAGGGACAAGAAGACAGCCACATACTCTTGGGCCTATGGACAAGTTTGCTAACATAATTGATCCCGATGCTACATTGAGTGGAAGCAAGAATACAAGACAACAAAATATCCATGACACACTTTTCAAGGAACGAACACATAGTGTGCATCAATTTTTGGCAAGATGGGTGTATGAAGTTGGAATTCCTTTTCATGCTATTGATAATGATAGCTTCAAGAGGTTTGTAGAAGCGGTTGGTCAATTTGATCCGGGTTACCGACCTCCAAGCCAATATTTATTAAGGGAGCCGTTATTGAAGGAAGAGGTAGATAGAACTAAAAGTTTGTTGAAGACCCAAGAACAAGAGTGGGCTTCAAATGGTTGCTCTATTATGACCGATGCTTGGAGTGACCGGAAAAGAAGAAGTATTATGAATTTGTGTGTCAATTGCAAGGAAGGCACAACTTTTCTCTCTTCTAAGGAGGCATCAAATGAGTCACACACCGGGGCGTACATTTTTGAATACGTGGATAAGTGCATTGAAGTAGTTGGGCCACAAAATGTGGTTCAAGTGGTGACGGACAATGCTTCAAATAATATGGCGGCGGGAGAGTTGATGAAGGTGAAGAGGCCAAGCATATTTTGGACCTCATGTGCAACTCATACATTGAATCTTATGCTTCAAGGAATTGGCAACCTTCCTAGATTCAAAGGAGTCATTGAGAAGGCAAAGAGCTTCACCATCTACATTTATGCACATCACAAGACTTTGGCATTGATGAGAAAGTATACGAAGAAAAGAGACATAGTGAGGCCGGGAGTTACAAGATTTGCAACCGCTTTCCTCACTTTACAAAGCTTGATGGAGAAGAAGAATGAGTTGAGAGCTATGATTACTAGTAGTGAATGGAGTGAAACCAAGCATGCAAAGAGTGTAAAGGGGAAGGCGGCCATGAATATTGCTTTGAGTGCTTCTTTTTGGAATGGGGTAAGTCTTTCTTTAAAAGTTTTTGCTCCTTTAGTCAAGGTGTTGCGTATTGTTGATGGGGATAGAAAGCCATCAATGGGCTTTGTGTATGGAGAGCTAATTAGAGCTAAAGAGGAGATTAAAAAGGTATTCAAAGATCAAGAAGCTCATTATCGGCCAATTCTTGACATTGTTGATGCGAAAGCCCGTGATCGACTTGATAGTCCATTGCATGTAGCGGCCTACCTCTTAAATCCTTACTACACATTTGCCGATCCAAGCCTTGAAAATGATGAGGTGGTCATGGATGGATTTTTTACTTGTGTTGAGAAATTATTTCCCGACATCCAAACTCAAAATTTGGTGATAAATATAGAGTTGCATAAGTATTTGAAGAAAGAGGGTCTATTTGGAAGGAATGTAGCCAAGGAGGGATGCAAGCAAAATGATGACGCATACGATCCGGTTGGATGGTGGAACCTTTATGGAAACAATGTGCCAACCTTGAAAAAAATGGCAAAAAGGATCCTTGCATTGACCACAAGTTCATCGGGATGTGAAAGAAATTGGAGTGCTTTTGAGGGGATCCATACAAAGAAAAGGAATAGACTAGATACAACAAGGTTAAATAATTTGGTCTATGTCCAATTCAATGCAAGAATTCTTAACAAGAAGAGAAGAGAGAAAGAGAAGAATGTGGATGTACTAATTGCTAGTGAAGCTAATATGGCACAAGGATGGATTGTTGATGGTGGTGATGATGATGTTGTTTCGGATCTTCCTAGTGAAAGGGTTGGAGAGGAATCGGGAGTAGATGGTGGCTTAGAGCCTAGGAGAGGTCCTAGAATCCAAGAAATTAGGGAACTTGATGAGGATGATTTTATATCCGATGATGAAGAGGAAATAGATGACTTGAATTTTGATTTTGAGTCGGATTCGGAGGGAGTACAAGATGGATATGGAGAAGAAGAATTTGAGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT

Protein Analysis

860

Amino Acids

96.33

Weight (kDa)

7.86

Isoelectric Point (pI)

47.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 305 - 455 1.7e-57 Domain of unknown function (DUF659)
Dimer_Tnp_hAT PF05699 658 - 750 3e-13 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000698)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G43260 AT5G31412
fragaria_vesca FvH4_2g24751 FvH4_3g29751 FvH4_3g29752 FvH4_3g32705 FvH4_4g20841 FvH4_5g39742 FvH4_6g06672 FvH4_6g28272 FvH4_6g28273 FvH4_7g00215
malus_domestica MD07G1147000.v1.1
prunus_persica Prupe.4G255800_v2.0.a1
pyrus_communis pycom09g15950 pycom10g13140
rosa_chinensis RchiOBHm_Chr1g0314441 RchiOBHm_Chr1g0314451 RchiOBHm_Chr4g0430441 RchiOBHm_Chr4g0430831 RchiOBHm_Chr5g0003001 RchiOBHm_Chr5g0033441 RchiOBHm_Chr6g0251571 RchiOBHm_Chr6g0288501
rosa_multiflora Rmu_co8007098.1_g000001 Rmu_co8211970.1_g000002 Rmu_sc0000146.1_g000031 Rmu_sc0000555.1_g000022 Rmu_sc0000968.1_g000005 Rmu_sc0001017.1_g000028 Rmu_sc0001208.1_g000044 Rmu_sc0001526.1_g000038 Rmu_sc0002226.1_g000026 Rmu_sc0002284.1_g000006 Rmu_sc0002776.1_g000004 Rmu_sc0003369.1_g000011 Rmu_sc0003632.1_g000005 Rmu_sc0004180.1_g000007 Rmu_sc0004180.1_g000008 Rmu_sc0005014.1_g000005 Rmu_sc0005023.1_g000011 Rmu_sc0007296.1_g000009 Rmu_sc0011153.1_g000002 Rmu_sc0011153.1_g000003 Rmu_sc0018472.1_g000003 Rmu_sc0020646.1_g000001 Rmu_sc0022773.1_g000001 Rmu_sc0022773.1_g000002 Rmu_sc0023555.1_g000001 Rmu_sc0023788.1_g000001 Rmu_ssc0000409.1_g000026 Rmu_ssc0000421.1_g000039
rosa_roxburghii Rroxscaffold_2G00091530 Rroxscaffold_5G00355490 Rroxscaffold_6G00405690 Rroxscaffold_6G00412290 Rroxscaffold_7G00195870
rosa_rugosa Rorug05G0244000
rosa_samantha Rh3DG075100
rosa_wichuraiana Rw0G014340 Rw1G023020 Rw2G020120 Rw2G033790 Rw2G035670 Rw3G022290 Rw3G023070 Rw3G023080 Rw4G003460 Rw4G017840 Rw4G032430 Rw5G024280 Rw5G044440 Rw6G027410 Rw7G020330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1818
AccB1I GGYRCC 1 cut(s) 496
AccI GTMKAC 1 cut(s) 1418
AciI CCGC 9 cut(s) 127, 182, 235, 881, 1232, 1235, 1467, 1577, 1835
AcoI YGGCCR 3 cut(s) 282, 1578, 1772
AcsI RAATTY 7 cut(s) 450, 831, 1063, 1954, 2256, 2512, 2567
AcuI CTGAAG 1 cut(s) 651
AdeI CACNNNGTG 1 cut(s) 791
AfaI GTAC 4 cut(s) 377, 1142, 2301, 2544
AfiI CCNNNNNNNGG 3 cut(s) 1032, 1694, 2432
AhdI GACNNNNNGTC 1 cut(s) 37
AhlI ACTAGT 1 cut(s) 1526
Alw26I GTCTC 3 cut(s) 9, 16, 1425
AoxI GGCC 9 cut(s) 282, 487, 680, 1181, 1259, 1442, 1578, 1772, 1836
ApeKI GCWGC 1 cut(s) 466
ApoI RAATTY 7 cut(s) 450, 831, 1063, 1954, 2256, 2512, 2567
ArsI GACNNNNNNTTYG 2 cut(s) 2498, 2530
AspA2I CCTAGG 1 cut(s) 2426
AspLEI GCGC 1 cut(s) 351
AspS9I GGNCC 5 cut(s) 487, 680, 1181, 1275, 2435
AsuC2I CCSGG 3 cut(s) 900, 1135, 1446
AsuHPI GGTGA 8 cut(s) 97, 152, 205, 1216, 1264, 1360, 1972, 2363
AvaII GGWCC 2 cut(s) 1275, 2435
AvrII CCTAGG 1 cut(s) 2426
BaeGI GKGCMC 1 cut(s) 435
BamHI GGATCC 2 cut(s) 2121, 2181
BanI GGYRCC 1 cut(s) 496
BarI GAAGNNNNNNTAC 2 cut(s) 724, 756
BauI CACGAG 1 cut(s) 434
BbsI GAAGAC 3 cut(s) 288, 667, 986
BbvI GCAGC 1 cut(s) 478
BceAI ACGGC 1 cut(s) 922
BcnI CCSGG 3 cut(s) 900, 1135, 1446
BcoDI GTCTC 3 cut(s) 9, 16, 1425
BcuI ACTAGT 1 cut(s) 1526
BfaI CTAG 8 cut(s) 8, 1332, 1527, 2207, 2310, 2379, 2427, 2439
BisI GCNGC 4 cut(s) 467, 1233, 1578, 1836
BlnI CCTAGG 1 cut(s) 2426
BlsI GCNGC 4 cut(s) 468, 1234, 1579, 1837
Bme1390I CCNGG 3 cut(s) 900, 1135, 1446
Bme18I GGWCC 2 cut(s) 1275, 2435
BmeRI GACNNNNNGTC 1 cut(s) 37
BmgT120I GGNCC 5 cut(s) 487, 680, 1181, 1275, 2435
BmiI GGNNCC 5 cut(s) 498, 936, 2075, 2123, 2183
BmrFI CCNGG 3 cut(s) 900, 1135, 1446
BmrI ACTGGG 3 cut(s) 85, 139, 193
BmsI GCATC 6 cut(s) 706, 805, 1018, 1124, 1783, 2021
BmuI ACTGGG 3 cut(s) 85, 139, 193
BoxI GACNNNNGTC 1 cut(s) 337
BpiI GAAGAC 3 cut(s) 288, 667, 986
BpmI CTGGAG 2 cut(s) 12, 40
BpuMI CCSGG 3 cut(s) 900, 1135, 1446
BsaAI YACGTR 1 cut(s) 1156
BsaJI CCNNGG 4 cut(s) 507, 1134, 2022, 2426
BsaWI WCCGGW 2 cut(s) 1041, 2059
Bsc4I CCNNNNNNNGG 3 cut(s) 1032, 1694, 2432
Bse118I RCCGGY 3 cut(s) 112, 167, 220
Bse1I ACTGG 4 cut(s) 57, 91, 145, 199
Bse3DI GCAATG 1 cut(s) 1823
BseDI CCNNGG 4 cut(s) 507, 1134, 2022, 2426
BseGI GGATG 9 cut(s) 387, 1909, 1941, 2036, 2072, 2156, 2302, 2339, 2476
BseLI CCNNNNNNNGG 3 cut(s) 1032, 1694, 2432
BseMI GCAATG 1 cut(s) 1823
BseMII CTCAG 3 cut(s) 50, 90, 543
BseNI ACTGG 4 cut(s) 57, 91, 145, 199
BseRI GAGGAG 2 cut(s) 244, 1745
BseSI GKGCMC 1 cut(s) 435
BseXI GCAGC 1 cut(s) 478
BsgI GTGCAG 1 cut(s) 567
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 9 cut(s) 284, 489, 682, 1183, 1261, 1444, 1580, 1774, 1838
BshNI GGYRCC 1 cut(s) 496
BsiEI CGRYCG 1 cut(s) 24
BsiSI CCGG 9 cut(s) 113, 168, 221, 285, 899, 1042, 1134, 1445, 2060
BslFI GGGAC 3 cut(s) 25, 489, 667
BslI CCNNNNNNNGG 3 cut(s) 1032, 1694, 2432
BsmAI GTCTC 3 cut(s) 9, 16, 1425
BsmFI GGGAC 3 cut(s) 25, 489, 667
BsmI GAATGC 1 cut(s) 547
BsnI GGCC 9 cut(s) 284, 489, 682, 1183, 1261, 1444, 1580, 1774, 1838
Bsp1286I GDGCHC 1 cut(s) 435
BspACI CCGC 9 cut(s) 127, 182, 235, 881, 1232, 1235, 1467, 1577, 1835
BspANI GGCC 9 cut(s) 284, 489, 682, 1183, 1261, 1444, 1580, 1774, 1838
BspCNI CTCAG 3 cut(s) 49, 89, 544
BspLI GGNNCC 5 cut(s) 498, 936, 2075, 2123, 2183
BspT107I GGYRCC 1 cut(s) 496
BsrDI GCAATG 1 cut(s) 1823
BsrFI RCCGGY 3 cut(s) 112, 167, 220
BsrI ACTGG 4 cut(s) 57, 91, 145, 199
BssAI RCCGGY 3 cut(s) 112, 167, 220
BssECI CCNNGG 4 cut(s) 507, 1134, 2022, 2426
BssNAI GTATAC 1 cut(s) 1419
BssSI CACGAG 1 cut(s) 434
BssT1I CCWWGG 3 cut(s) 507, 2022, 2426
Bst1107I GTATAC 1 cut(s) 1419
Bst2BI CACGAG 1 cut(s) 434
Bst6I CTCTTC 9 cut(s) 138, 193, 246, 945, 1108, 1250, 2264, 2269, 2487
BstBAI YACGTR 1 cut(s) 1156
BstC8I GCNNGC 8 cut(s) 114, 118, 169, 173, 222, 226, 1554, 2036
BstDEI CTNAG 5 cut(s) 36, 76, 552, 1107, 2419
BstEII GGTNACC 1 cut(s) 902
BstENI CCTNNNNNAGG 1 cut(s) 2430
BstF5I GGATG 9 cut(s) 387, 1909, 1941, 2036, 2072, 2156, 2302, 2339, 2476
BstHHI GCGC 1 cut(s) 351
BstMAI GTCTC 3 cut(s) 9, 16, 1425
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 9 cut(s) 32, 126, 181, 234, 430, 1086, 1598, 2315, 2324
BstNSI RCATGY 3 cut(s) 473, 1556, 1832
BstPAI GACNNNNGTC 1 cut(s) 337
BstPI GGTNACC 1 cut(s) 902
BstSCI CCNGG 3 cut(s) 898, 1133, 1444
BstSLI GKGCMC 1 cut(s) 435
BstV1I GCAGC 1 cut(s) 478
BstV2I GAAGAC 3 cut(s) 288, 667, 986
BstX2I RGATCY 3 cut(s) 2121, 2181, 2371
BstYI RGATCY 3 cut(s) 2121, 2181, 2371
BstZ17I GTATAC 1 cut(s) 1419
BsuRI GGCC 9 cut(s) 284, 489, 682, 1183, 1261, 1444, 1580, 1774, 1838
BtsCI GGATG 9 cut(s) 387, 1909, 1941, 2036, 2072, 2156, 2302, 2339, 2476
Cac8I GCNNGC 8 cut(s) 114, 118, 169, 173, 222, 226, 1554, 2036
CfoI GCGC 1 cut(s) 351
Cfr10I RCCGGY 3 cut(s) 112, 167, 220
Cfr13I GGNCC 5 cut(s) 487, 680, 1181, 1275, 2435
CseI GACGC 2 cut(s) 41, 2057
Csp6I GTAC 4 cut(s) 376, 1141, 2300, 2543
CviQI GTAC 4 cut(s) 376, 1141, 2300, 2543
DdeI CTNAG 5 cut(s) 36, 76, 552, 1107, 2419
DraI TTTAAA 1 cut(s) 1632
DraIII CACNNNGTG 1 cut(s) 791
DrdI GACNNNNNNGTC 1 cut(s) 1818
DriI GACNNNNNGTC 1 cut(s) 37
DseDI GACNNNNNNGTC 1 cut(s) 1818
EaeI YGGCCR 3 cut(s) 282, 1578, 1772
Eam1104I CTCTTC 9 cut(s) 138, 193, 246, 945, 1108, 1250, 2264, 2269, 2487
Eam1105I GACNNNNNGTC 1 cut(s) 37
EarI CTCTTC 9 cut(s) 138, 193, 246, 945, 1108, 1250, 2264, 2269, 2487
Eco130I CCWWGG 3 cut(s) 507, 2022, 2426
Eco47I GGWCC 2 cut(s) 1275, 2435
Eco57I CTGAAG 1 cut(s) 651
Eco91I GGTNACC 1 cut(s) 902
EcoNI CCTNNNNNAGG 1 cut(s) 2430
EcoO109I RGGNCCY 1 cut(s) 2435
EcoO65I GGTNACC 1 cut(s) 902
EcoRI GAATTC 3 cut(s) 450, 831, 2256
EcoT14I CCWWGG 3 cut(s) 507, 2022, 2426
ErhI CCWWGG 3 cut(s) 507, 2022, 2426
FalI AAGNNNNNCTT 4 cut(s) 597, 629, 1612, 1644
FaqI GGGAC 3 cut(s) 25, 489, 667
FauI CCCGC 4 cut(s) 134, 189, 242, 1228
FblI GTMKAC 1 cut(s) 1418
Fnu4HI GCNGC 4 cut(s) 467, 1233, 1578, 1836
FokI GGATG 9 cut(s) 394, 1916, 1928, 2043, 2079, 2163, 2309, 2346, 2483
Fsp4HI GCNGC 4 cut(s) 467, 1233, 1578, 1836
FspBI CTAG 8 cut(s) 8, 1332, 1527, 2207, 2310, 2379, 2427, 2439
GlaI GCGC 1 cut(s) 350
GluI GCNGC 4 cut(s) 467, 1233, 1578, 1836
GsuI CTGGAG 2 cut(s) 12, 40
HaeIII GGCC 9 cut(s) 284, 489, 682, 1183, 1261, 1444, 1580, 1774, 1838
HapII CCGG 9 cut(s) 113, 168, 221, 285, 899, 1042, 1134, 1445, 2060
HgaI GACGC 2 cut(s) 41, 2057
HhaI GCGC 1 cut(s) 351
Hin6I GCGC 1 cut(s) 349
HinP1I GCGC 1 cut(s) 349
HindIII AAGCTT 1 cut(s) 1486
HpaII CCGG 9 cut(s) 113, 168, 221, 285, 899, 1042, 1134, 1445, 2060
HphI GGTGA 8 cut(s) 97, 152, 205, 1216, 1264, 1360, 1972, 2363
Hpy166II GTNNAC 1 cut(s) 1419
Hpy188I TCNGA 6 cut(s) 267, 322, 2371, 2485, 2530, 2536
Hpy8I GTNNAC 1 cut(s) 1419
HpyAV CCTTC 7 cut(s) 940, 1079, 1243, 1337, 1348, 1567, 2004
HpyCH4IV ACGT 1 cut(s) 1155
HpyF10VI GCNNNNNNNGC 9 cut(s) 32, 126, 181, 234, 430, 1086, 1598, 2315, 2324
HpyF3I CTNAG 5 cut(s) 36, 76, 552, 1107, 2419
HpySE526I ACGT 1 cut(s) 1155
HspAI GCGC 1 cut(s) 349
KroI GCCGGC 3 cut(s) 112, 167, 220
KroNI GCCGGC 3 cut(s) 114, 169, 222
LmnI GCTCC 3 cut(s) 31, 934, 1648
Lsp1109I GCAGC 1 cut(s) 478
LweI GCATC 6 cut(s) 706, 805, 1018, 1124, 1783, 2021
MaeI CTAG 8 cut(s) 8, 1332, 1527, 2207, 2310, 2379, 2427, 2439
MaeII ACGT 1 cut(s) 1155
MaeIII GTNAC 5 cut(s) 902, 1037, 1125, 1204, 1450
MfeI CAATTG 1 cut(s) 1075
MflI RGATCY 3 cut(s) 2121, 2181, 2371
MhlI GDGCHC 1 cut(s) 435
MlyI GAGTC 5 cut(s) 347, 563, 1133, 1353, 2534
MmeI TCCRAC 5 cut(s) 457, 808, 2044, 2371, 2508
MroNI GCCGGC 3 cut(s) 112, 167, 220
MseI TTAA 8 cut(s) 356, 564, 929, 1631, 1737, 1847, 2222, 2262
MslI CAYNNNNRTG 2 cut(s) 2149, 2332
MspI CCGG 9 cut(s) 113, 168, 221, 285, 899, 1042, 1134, 1445, 2060
MspR9I CCNGG 3 cut(s) 900, 1135, 1446
MunI CAATTG 1 cut(s) 1075
Mva1269I GAATGC 1 cut(s) 547
MwoI GCNNNNNNNGC 9 cut(s) 32, 126, 181, 234, 430, 1086, 1598, 2315, 2324
NaeI GCCGGC 3 cut(s) 114, 169, 222
NciI CCSGG 3 cut(s) 900, 1135, 1446
NgoMIV GCCGGC 3 cut(s) 112, 167, 220
NlaIV GGNNCC 5 cut(s) 498, 936, 2075, 2123, 2183
NmuCI GTSAC 3 cut(s) 1037, 1125, 1204
NspI RCATGY 3 cut(s) 473, 1556, 1832
PaeI GCATGC 1 cut(s) 1556
PctI GAATGC 1 cut(s) 547
PdiI GCCGGC 3 cut(s) 114, 169, 222
PfeI GAWTC 7 cut(s) 480, 571, 1300, 1335, 2399, 2442, 2531
PkrI GCNGC 4 cut(s) 468, 1234, 1579, 1837
PleI GAGTC 5 cut(s) 346, 562, 1132, 1352, 2533
PpsI GAGTC 5 cut(s) 346, 562, 1132, 1352, 2533
Ppu21I YACGTR 1 cut(s) 1156
PpuMI RGGWCCY 1 cut(s) 2435
PshAI GACNNNNGTC 1 cut(s) 337
Psp5II RGGWCCY 1 cut(s) 2435
PspEI GGTNACC 1 cut(s) 902
PspN4I GGNNCC 5 cut(s) 498, 936, 2075, 2123, 2183
PspPI GGNCC 5 cut(s) 487, 680, 1181, 1275, 2435
PspPPI RGGWCCY 1 cut(s) 2435
PsuI RGATCY 3 cut(s) 2121, 2181, 2371
RsaI GTAC 4 cut(s) 377, 1142, 2301, 2544
RsaNI GTAC 4 cut(s) 376, 1141, 2300, 2543
RseI CAYNNNNRTG 2 cut(s) 2149, 2332
SaqAI TTAA 8 cut(s) 356, 564, 929, 1631, 1737, 1847, 2222, 2262
SatI GCNGC 4 cut(s) 467, 1233, 1578, 1836
Sau96I GGNCC 5 cut(s) 487, 680, 1181, 1275, 2435
SchI GAGTC 5 cut(s) 347, 563, 1133, 1353, 2534
ScrFI CCNGG 3 cut(s) 900, 1135, 1446
SduI GDGCHC 1 cut(s) 435
SfaNI GCATC 6 cut(s) 706, 805, 1018, 1124, 1783, 2021
SinI GGWCC 2 cut(s) 1275, 2435
SmiMI CAYNNNNRTG 2 cut(s) 2149, 2332
SpeI ACTAGT 1 cut(s) 1526
SphI GCATGC 1 cut(s) 1556
SsiI CCGC 9 cut(s) 127, 182, 235, 881, 1232, 1235, 1467, 1577, 1835
SspI AATATT 2 cut(s) 923, 1588
SspMI CTAG 8 cut(s) 8, 1332, 1527, 2207, 2310, 2379, 2427, 2439
StyD4I CCNGG 3 cut(s) 898, 1133, 1444
StyI CCWWGG 3 cut(s) 507, 2022, 2426
TaiI ACGT 1 cut(s) 1158
TaqI TCGA 1 cut(s) 1810
TaqII GACCGA 2 cut(s) 10, 1040
TatI WGTACW 2 cut(s) 2299, 2542
TauI GCSGC 3 cut(s) 1235, 1580, 1838
TfiI GAWTC 7 cut(s) 480, 571, 1300, 1335, 2399, 2442, 2531
Tru1I TTAA 8 cut(s) 356, 564, 929, 1631, 1737, 1847, 2222, 2262
Tru9I TTAA 8 cut(s) 356, 564, 929, 1631, 1737, 1847, 2222, 2262
TseFI GTSAC 3 cut(s) 1037, 1125, 1204
TseI GCWGC 1 cut(s) 466
Tsp45I GTSAC 3 cut(s) 1037, 1125, 1204
TspDTI ATGAA 9 cut(s) 443, 603, 830, 837, 1076, 1262, 1598, 2133, 2505
TspGWI ACGGA 1 cut(s) 1223
VpaK11BI GGWCC 2 cut(s) 1275, 2435
XagI CCTNNNNNAGG 1 cut(s) 2430
XapI RAATTY 7 cut(s) 450, 831, 1063, 1954, 2256, 2512, 2567
XceI RCATGY 3 cut(s) 473, 1556, 1832
XcmI CCANNNNNNNNNTGG 1 cut(s) 1269
XmaJI CCTAGG 1 cut(s) 2426
XmiI GTMKAC 1 cut(s) 1418
XspI CTAG 8 cut(s) 8, 1332, 1527, 2207, 2310, 2379, 2427, 2439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.