Rmu_sc0004180.1_g000007

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004180.1
OG0000698
Physical Location & Seq
Forward (+)
53369 .. 57613
4245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004180.1_g000007.1.cds

Sequence Viewer

Length: 1749 bp
atgcgacgtcacatggaaaaatcactccgaatggagcacatgtcgatcaacgacccgcgaaaattgtgggttgctcttgaagagtgttttgaaaacattcaagattccctcttctctgacttgaaggttcaatggaacaaactacgcttcgcctactttaagtccatcttcgaatataattcagaagctcaatgcctcaaatccttgttaggaggtgaatacaatgctggacaggtcatgaggtttcatcagctaacgaggtttcatcagctaataaatgttatgtctgtagctgagaaacatgataatatcctcatcctcatgaagaattataattcaaggcccgttggaactaagagcgttcatgagacgaattataatattgcacccaaaggagggcgcaaggagcggaaccctaaagttaagggacaaaacggacgtatgggtccatataaccgccctacaaaggaaggaaaccaccaaaatggagcaggatcacgtggcaacaccggccaacgtgggagagaggggcatggagctgccggccatagggttggcgccactgtcgaacaaggacgccaaaaccgcccatgcccatgtgcacaaggtgcacctcaattaaaaggtggcaatcacaacaatgcaacacaagaaacaagcgctaggcggcaagaggccgaggctagtaaggggaaatcgacggccgcccgcctgggtggtctgggatgttctggccctttgcttcactcctcgtctcctccaccgcagctttcgctctgcagctcggcttcactcctcatctgttcttctccatgcttcactcctcgtcccctccaccgcagctcccctaagccaccgaagctcccccaagccaccgaagctcaattgcgcgcccttccacagcagctccccgagccatcgcagctccccccgagccaccgcatctccattgcgcctctgctcctgtgctccaccacctcagacttcctctgctccgccccgccttcagactcccagttgtcattcccaaaatcgaccccatcgtccatgcatttcaagagttctaagtttgcggtattggcggatccacacaacttagacaagttgaagtgtaagttgtgtgggaaagtgattagtggtggaatacatcgaatgaagcaacacattgccaacatcaagggaaatgttgcctcatgcaagaattctacggatgccgataaagccaaatgtatagccgcaatagagggagcaaaacttcagagaaagcaaaaggatatgcatgagaaggaagtgagggaagaagttgaagtttctcaatcacatgatgtagaaaatgtagaaattgaagggccaagtttgtcaagaaaaaggtcgcactttcttgggcctatagacaagtttgcatcttctatcactccctattcttcaattgatggaagcaagaagatgcgtcaacaaaacattaatgatgccatttggaaggaaagaacacatagtgtgcatcaatggttggctaggtgtgtgtatgaagccggcattccatttcatgccattgataatgatagcttcaaaagatttgtagaagcggttggtcaattcggcccgagttaccgacctccaactcaataccaactaagagagccattgttgaaggaagaggttgagaggactaaaaattcactcaagaagcatgaagaagagtgggcaaagaatggttgttccattatgaccgatgcttggagtgactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT

Protein Analysis

582

Amino Acids

64.81

Weight (kDa)

9.48

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000698)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G43260 AT5G31412
fragaria_vesca FvH4_2g24751 FvH4_3g29751 FvH4_3g29752 FvH4_3g32705 FvH4_4g20841 FvH4_5g39742 FvH4_6g06672 FvH4_6g28272 FvH4_6g28273 FvH4_7g00215
malus_domestica MD07G1147000.v1.1
prunus_persica Prupe.4G255800_v2.0.a1
pyrus_communis pycom09g15950 pycom10g13140
rosa_chinensis RchiOBHm_Chr1g0314441 RchiOBHm_Chr1g0314451 RchiOBHm_Chr4g0430441 RchiOBHm_Chr4g0430831 RchiOBHm_Chr5g0003001 RchiOBHm_Chr5g0033441 RchiOBHm_Chr6g0251571 RchiOBHm_Chr6g0288501
rosa_multiflora Rmu_co8007098.1_g000001 Rmu_co8211970.1_g000002 Rmu_sc0000146.1_g000031 Rmu_sc0000555.1_g000022 Rmu_sc0000968.1_g000005 Rmu_sc0001017.1_g000028 Rmu_sc0001208.1_g000044 Rmu_sc0001526.1_g000038 Rmu_sc0002226.1_g000026 Rmu_sc0002284.1_g000006 Rmu_sc0002776.1_g000004 Rmu_sc0003369.1_g000011 Rmu_sc0003632.1_g000005 Rmu_sc0004180.1_g000007 Rmu_sc0004180.1_g000008 Rmu_sc0005014.1_g000005 Rmu_sc0005023.1_g000011 Rmu_sc0007296.1_g000009 Rmu_sc0011153.1_g000002 Rmu_sc0011153.1_g000003 Rmu_sc0018472.1_g000003 Rmu_sc0020646.1_g000001 Rmu_sc0022773.1_g000001 Rmu_sc0022773.1_g000002 Rmu_sc0023555.1_g000001 Rmu_sc0023788.1_g000001 Rmu_ssc0000409.1_g000026 Rmu_ssc0000421.1_g000039
rosa_roxburghii Rroxscaffold_2G00091530 Rroxscaffold_5G00355490 Rroxscaffold_6G00405690 Rroxscaffold_6G00412290 Rroxscaffold_7G00195870
rosa_rugosa Rorug05G0244000
rosa_samantha Rh3DG075100
rosa_wichuraiana Rw0G014340 Rw1G023020 Rw2G020120 Rw2G033790 Rw2G035670 Rw3G022290 Rw3G023070 Rw3G023080 Rw4G003460 Rw4G017840 Rw4G032430 Rw5G024280 Rw5G044440 Rw6G027410 Rw7G020330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 333, 378
AasI GACNNNNNNGTC 2 cut(s) 444, 1042
AatII GACGTC 1 cut(s) 10
AccB1I GGYRCC 1 cut(s) 557
AccBSI CCGCTC 1 cut(s) 409
AccII CGCG 2 cut(s) 58, 891
AclWI GGATC 3 cut(s) 502, 1079, 1092
AcoI YGGCCR 3 cut(s) 511, 544, 702
AcsI RAATTY 2 cut(s) 1201, 1675
AcuI CTGAAG 2 cut(s) 990, 1241
AcvI CACGTG 1 cut(s) 500
AcyI GRCGYC 3 cut(s) 7, 558, 577
AdeI CACNNNGTG 2 cut(s) 608, 1496
AfeI AGCGCT 1 cut(s) 661
AfiI CCNNNNNNNGG 5 cut(s) 395, 396, 466, 549, 1737
AflIII ACRYGT 1 cut(s) 39
AjnI CCWGG 1 cut(s) 711
Alw21I GWGCWC 4 cut(s) 39, 604, 613, 971
Alw26I GTCTC 2 cut(s) 362, 759
Alw44I GTGCAC 2 cut(s) 600, 609
AlwI GGATC 3 cut(s) 502, 1079, 1092
Ama87I CYCGRG 3 cut(s) 911, 931, 1603
Aor51HI AGCGCT 1 cut(s) 661
AoxI GGCC 9 cut(s) 341, 511, 544, 675, 702, 733, 1349, 1385, 1600
ApaLI GTGCAC 2 cut(s) 600, 609
ApeKI GCWGC 6 cut(s) 539, 766, 780, 840, 904, 922
ApoI RAATTY 2 cut(s) 1201, 1675
AseI ATTAAT 1 cut(s) 1464
Asp700I GAANNNNTTC 1 cut(s) 96
AspLEI GCGC 6 cut(s) 402, 560, 662, 891, 893, 955
AspS9I GGNCC 6 cut(s) 342, 446, 734, 1349, 1385, 1601
AsuHPI GGTGA 1 cut(s) 227
AsuII TTCGAA 1 cut(s) 171
AvaI CYCGRG 3 cut(s) 911, 931, 1603
AvaII GGWCC 1 cut(s) 446
BaeGI GKGCMC 2 cut(s) 604, 613
BamHI GGATCC 1 cut(s) 1084
BanI GGYRCC 1 cut(s) 557
BbrPI CACGTG 1 cut(s) 500
Bbv12I GWGCWC 4 cut(s) 39, 604, 613, 971
BbvI GCAGC 6 cut(s) 526, 778, 792, 852, 916, 934
BccI CCATC 4 cut(s) 173, 925, 1048, 1427
BceAI ACGGC 1 cut(s) 717
BciT130I CCWGG 1 cut(s) 713
BcoDI GTCTC 2 cut(s) 362, 759
BfaI CTAG 3 cut(s) 663, 684, 1515
BfmI CTRYAG 3 cut(s) 288, 778, 1389
BfoI RGCGCY 2 cut(s) 561, 663
BisI GCNGC 9 cut(s) 540, 668, 705, 767, 781, 841, 905, 923, 1236
BlsI GCNGC 9 cut(s) 541, 669, 706, 768, 782, 842, 906, 924, 1237
Bme1390I CCNGG 1 cut(s) 713
Bme18I GGWCC 1 cut(s) 446
BmeT110I CYCGRG 3 cut(s) 911, 931, 1603
BmgT120I GGNCC 6 cut(s) 342, 446, 734, 1349, 1385, 1601
BmiI GGNNCC 4 cut(s) 413, 447, 559, 1086
BmrFI CCNGG 1 cut(s) 713
BmrI ACTGGG 1 cut(s) 1009
BmsI GCATC 7 cut(s) 951, 1201, 1412, 1437, 1459, 1510, 1723
BmuI ACTGGG 1 cut(s) 1009
Bpu10I CCTNAGC 1 cut(s) 849
Bpu14I TTCGAA 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 1667
BsaAI YACGTR 1 cut(s) 500
BsaHI GRCGYC 3 cut(s) 7, 558, 577
BsaJI CCNNGG 2 cut(s) 678, 712
Bsc4I CCNNNNNNNGG 5 cut(s) 395, 396, 466, 549, 1737
Bse118I RCCGGY 3 cut(s) 509, 542, 1532
Bse1I ACTGG 1 cut(s) 1015
Bse3DI GCAATG 2 cut(s) 948, 1164
BseBI CCWGG 1 cut(s) 713
BseDI CCNNGG 2 cut(s) 678, 712
BseGI GGATG 3 cut(s) 315, 731, 1216
BseLI CCNNNNNNNGG 5 cut(s) 395, 396, 466, 549, 1737
BseMI GCAATG 2 cut(s) 948, 1164
BseMII CTCAG 2 cut(s) 285, 993
BseNI ACTGG 1 cut(s) 1015
BsePI GCGCGC 1 cut(s) 889
BseRI GAGGAG 4 cut(s) 739, 747, 785, 813
BseSI GKGCMC 2 cut(s) 604, 613
BseX3I CGGCCG 1 cut(s) 702
BseXI GCAGC 6 cut(s) 526, 778, 792, 852, 916, 934
Bsh1236I CGCG 2 cut(s) 58, 891
Bsh1285I CGRYCG 1 cut(s) 705
BshFI GGCC 9 cut(s) 343, 513, 546, 677, 704, 735, 1351, 1387, 1602
BshNI GGYRCC 1 cut(s) 557
BsiEI CGRYCG 1 cut(s) 705
BsiHKAI GWGCWC 4 cut(s) 39, 604, 613, 971
BsiHKCI CYCGRG 3 cut(s) 911, 931, 1603
BsiSI CCGG 3 cut(s) 510, 543, 1533
BslFI GGGAC 2 cut(s) 441, 813
BslI CCNNNNNNNGG 5 cut(s) 395, 396, 466, 549, 1737
BsmAI GTCTC 2 cut(s) 362, 759
BsmBI CGTCTC 2 cut(s) 362, 759
BsmFI GGGAC 2 cut(s) 441, 813
BsmI GAATGC 1 cut(s) 1536
BsnI GGCC 9 cut(s) 343, 513, 546, 677, 704, 735, 1351, 1387, 1602
BsoBI CYCGRG 3 cut(s) 911, 931, 1603
Bsp119I TTCGAA 1 cut(s) 171
Bsp1286I GDGCHC 4 cut(s) 39, 604, 613, 971
Bsp143I GATC 3 cut(s) 45, 494, 1084
BspANI GGCC 9 cut(s) 343, 513, 546, 677, 704, 735, 1351, 1387, 1602
BspCNI CTCAG 2 cut(s) 286, 992
BspFNI CGCG 2 cut(s) 58, 891
BspHI TCATGA 3 cut(s) 237, 321, 364
BspLI GGNNCC 4 cut(s) 413, 447, 559, 1086
BspMAI CTGCAG 1 cut(s) 782
BspPI GGATC 3 cut(s) 502, 1079, 1092
BspT104I TTCGAA 1 cut(s) 171
BspT107I GGYRCC 1 cut(s) 557
BsrBI CCGCTC 1 cut(s) 409
BsrDI GCAATG 2 cut(s) 948, 1164
BsrFI RCCGGY 3 cut(s) 509, 542, 1532
BsrI ACTGG 1 cut(s) 1015
BssAI RCCGGY 3 cut(s) 509, 542, 1532
BssECI CCNNGG 2 cut(s) 678, 712
BssHII GCGCGC 1 cut(s) 889
BssMI GATC 3 cut(s) 45, 494, 1084
BssNI GRCGYC 3 cut(s) 7, 558, 577
Bst2UI CCWGG 1 cut(s) 713
Bst4CI ACNGT 1 cut(s) 565
Bst6I CTCTTC 4 cut(s) 75, 116, 1650, 1692
BstACI GRCGYC 3 cut(s) 7, 558, 577
BstAPI GCANNNNNTGC 1 cut(s) 608
BstBAI YACGTR 1 cut(s) 500
BstBI TTCGAA 1 cut(s) 171
BstC8I GCNNGC 4 cut(s) 544, 709, 891, 1534
BstDEI CTNAG 7 cut(s) 294, 354, 849, 979, 1065, 1096, 1634
BstF5I GGATG 3 cut(s) 315, 731, 1216
BstFNI CGCG 2 cut(s) 58, 891
BstH2I RGCGCY 2 cut(s) 561, 663
BstHHI GCGC 6 cut(s) 402, 560, 662, 891, 893, 955
BstKTI GATC 3 cut(s) 48, 497, 1087
BstMAI GTCTC 2 cut(s) 362, 759
BstMBI GATC 3 cut(s) 45, 494, 1084
BstMCI CGRYCG 1 cut(s) 705
BstNI CCWGG 1 cut(s) 713
BstNSI RCATGY 1 cut(s) 43
BstSCI CCNGG 1 cut(s) 711
BstSFI CTRYAG 3 cut(s) 288, 778, 1389
BstSLI GKGCMC 2 cut(s) 604, 613
BstUI CGCG 2 cut(s) 58, 891
BstV1I GCAGC 6 cut(s) 526, 778, 792, 852, 916, 934
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 2 cut(s) 485, 554
BstYI RGATCY 1 cut(s) 1084
BstZI CGGCCG 1 cut(s) 702
BsuRI GGCC 9 cut(s) 343, 513, 546, 677, 704, 735, 1351, 1387, 1602
BtgZI GCGATG 1 cut(s) 903
BtsCI GGATG 3 cut(s) 315, 731, 1216
BtsIMutI CAGTG 1 cut(s) 561
Cac8I GCNNGC 4 cut(s) 544, 709, 891, 1534
CciI TCATGA 3 cut(s) 237, 321, 364
CfoI GCGC 6 cut(s) 402, 560, 662, 891, 893, 955
Cfr10I RCCGGY 3 cut(s) 509, 542, 1532
Cfr13I GGNCC 6 cut(s) 342, 446, 734, 1349, 1385, 1601
CseI GACGC 2 cut(s) 585, 1439
DdeI CTNAG 7 cut(s) 294, 354, 849, 979, 1065, 1096, 1634
DinI GGCGCC 1 cut(s) 559
DpnI GATC 3 cut(s) 47, 496, 1086
DpnII GATC 3 cut(s) 45, 494, 1084
DraIII CACNNNGTG 2 cut(s) 608, 1496
DrdI GACNNNNNNGTC 2 cut(s) 444, 1042
DseDI GACNNNNNNGTC 2 cut(s) 444, 1042
EaeI YGGCCR 3 cut(s) 511, 544, 702
EagI CGGCCG 1 cut(s) 702
Eam1104I CTCTTC 4 cut(s) 75, 116, 1650, 1692
EarI CTCTTC 4 cut(s) 75, 116, 1650, 1692
EciI GGCGGA 2 cut(s) 985, 1097
EclXI CGGCCG 1 cut(s) 702
Eco47I GGWCC 1 cut(s) 446
Eco47III AGCGCT 1 cut(s) 661
Eco52I CGGCCG 1 cut(s) 702
Eco57I CTGAAG 2 cut(s) 990, 1241
Eco72I CACGTG 1 cut(s) 500
Eco88I CYCGRG 3 cut(s) 911, 931, 1603
EcoRI GAATTC 1 cut(s) 1201
EcoRII CCWGG 1 cut(s) 711
EcoT22I ATGCAT 2 cut(s) 1053, 1281
EgeI GGCGCC 1 cut(s) 559
EheI GGCGCC 1 cut(s) 559
Esp3I CGTCTC 2 cut(s) 362, 759
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 2 cut(s) 441, 813
FauI CCCGC 3 cut(s) 63, 716, 1008
Fnu4HI GCNGC 9 cut(s) 540, 668, 705, 767, 781, 841, 905, 923, 1236
FokI GGATG 3 cut(s) 302, 738, 1223
Fsp4HI GCNGC 9 cut(s) 540, 668, 705, 767, 781, 841, 905, 923, 1236
FspBI CTAG 3 cut(s) 663, 684, 1515
GlaI GCGC 6 cut(s) 401, 559, 661, 890, 892, 954
GluI GCNGC 9 cut(s) 540, 668, 705, 767, 781, 841, 905, 923, 1236
HaeII RGCGCY 2 cut(s) 561, 663
HaeIII GGCC 9 cut(s) 343, 513, 546, 677, 704, 735, 1351, 1387, 1602
HapII CCGG 3 cut(s) 510, 543, 1533
HgaI GACGC 2 cut(s) 585, 1439
HhaI GCGC 6 cut(s) 402, 560, 662, 891, 893, 955
Hin1I GRCGYC 3 cut(s) 7, 558, 577
Hin6I GCGC 6 cut(s) 400, 558, 660, 889, 891, 953
HinP1I GCGC 6 cut(s) 400, 558, 660, 889, 891, 953
HincII GTYRAC 1 cut(s) 1454
HindII GTYRAC 1 cut(s) 1454
HinfI GANTC 2 cut(s) 104, 1010
HpaII CCGG 3 cut(s) 510, 543, 1533
HphI GGTGA 1 cut(s) 227
Hpy166II GTNNAC 3 cut(s) 602, 611, 1454
Hpy188I TCNGA 6 cut(s) 29, 118, 184, 982, 1009, 1260
Hpy188III TCNNGA 8 cut(s) 77, 101, 238, 322, 365, 1057, 1362, 1684
Hpy8I GTNNAC 3 cut(s) 602, 611, 1454
Hpy99I CGWCG 2 cut(s) 9, 703
HpyAV CCTTC 8 cut(s) 118, 464, 905, 1014, 1279, 1340, 1474, 1645
HpyCH4III ACNGT 1 cut(s) 565
HpyCH4IV ACGT 4 cut(s) 7, 439, 499, 517
HpyF3I CTNAG 7 cut(s) 294, 354, 849, 979, 1065, 1096, 1634
HpySE526I ACGT 4 cut(s) 7, 439, 499, 517
Hsp92I GRCGYC 3 cut(s) 7, 558, 577
HspAI GCGC 6 cut(s) 400, 558, 660, 889, 891, 953
KasI GGCGCC 1 cut(s) 557
KroI GCCGGC 2 cut(s) 542, 1532
KroNI GCCGGC 2 cut(s) 544, 1534
Kzo9I GATC 3 cut(s) 45, 494, 1084
Lsp1109I GCAGC 6 cut(s) 526, 778, 792, 852, 916, 934
LweI GCATC 7 cut(s) 951, 1201, 1412, 1437, 1459, 1510, 1723
MaeI CTAG 3 cut(s) 663, 684, 1515
MaeII ACGT 4 cut(s) 7, 439, 499, 517
MaeIII GTNAC 3 cut(s) 8, 1607, 1742
MalI GATC 3 cut(s) 47, 496, 1086
MbiI CCGCTC 1 cut(s) 409
MboI GATC 3 cut(s) 45, 494, 1084
MfeI CAATTG 2 cut(s) 884, 1428
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 4 cut(s) 39, 604, 613, 971
Mly113I GGCGCC 1 cut(s) 558
MlyI GAGTC 1 cut(s) 1004
MmeI TCCRAC 2 cut(s) 328, 1643
Mph1103I ATGCAT 2 cut(s) 1053, 1281
MroNI GCCGGC 2 cut(s) 542, 1532
MroXI GAANNNNTTC 1 cut(s) 96
MseI TTAA 4 cut(s) 159, 423, 620, 1464
MslI CAYNNNNRTG 4 cut(s) 320, 483, 595, 639
MspI CCGG 3 cut(s) 510, 543, 1533
MspR9I CCNGG 1 cut(s) 713
MunI CAATTG 2 cut(s) 884, 1428
Mva1269I GAATGC 1 cut(s) 1536
MvaI CCWGG 1 cut(s) 713
MvnI CGCG 2 cut(s) 58, 891
NaeI GCCGGC 2 cut(s) 544, 1534
NarI GGCGCC 1 cut(s) 558
NdeII GATC 3 cut(s) 45, 494, 1084
NgoMIV GCCGGC 2 cut(s) 542, 1532
NlaIV GGNNCC 4 cut(s) 413, 447, 559, 1086
NmeAIII GCCGAG 2 cut(s) 703, 764
NmuCI GTSAC 2 cut(s) 8, 1742
NsiI ATGCAT 2 cut(s) 1053, 1281
NspI RCATGY 1 cut(s) 43
NspV TTCGAA 1 cut(s) 171
PagI TCATGA 3 cut(s) 237, 321, 364
PauI GCGCGC 1 cut(s) 889
PciI ACATGT 1 cut(s) 39
PcsI WCGNNNNNNNCGW 1 cut(s) 1040
PctI GAATGC 1 cut(s) 1536
PdiI GCCGGC 2 cut(s) 544, 1534
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 1 cut(s) 104
PkrI GCNGC 9 cut(s) 541, 669, 706, 768, 782, 842, 906, 924, 1237
PleI GAGTC 1 cut(s) 1004
PluTI GGCGCC 1 cut(s) 561
PmaCI CACGTG 1 cut(s) 500
PmlI CACGTG 1 cut(s) 500
PpsI GAGTC 1 cut(s) 1004
Ppu21I YACGTR 1 cut(s) 500
PscI ACATGT 1 cut(s) 39
PshBI ATTAAT 1 cut(s) 1464
PsiI TTATAA 2 cut(s) 333, 378
Psp6I CCWGG 1 cut(s) 711
PspCI CACGTG 1 cut(s) 500
PspGI CCWGG 1 cut(s) 711
PspN4I GGNNCC 4 cut(s) 413, 447, 559, 1086
PspPI GGNCC 6 cut(s) 342, 446, 734, 1349, 1385, 1601
PstI CTGCAG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 1084
PteI GCGCGC 1 cut(s) 889
RseI CAYNNNNRTG 4 cut(s) 320, 483, 595, 639
SaqAI TTAA 4 cut(s) 159, 423, 620, 1464
SatI GCNGC 9 cut(s) 540, 668, 705, 767, 781, 841, 905, 923, 1236
Sau3AI GATC 3 cut(s) 45, 494, 1084
Sau96I GGNCC 6 cut(s) 342, 446, 734, 1349, 1385, 1601
SchI GAGTC 1 cut(s) 1004
ScrFI CCNGG 1 cut(s) 713
SduI GDGCHC 4 cut(s) 39, 604, 613, 971
SfaNI GCATC 7 cut(s) 951, 1201, 1412, 1437, 1459, 1510, 1723
SfcI CTRYAG 3 cut(s) 288, 778, 1389
SfoI GGCGCC 1 cut(s) 559
SfuI TTCGAA 1 cut(s) 171
SinI GGWCC 1 cut(s) 446
SmiMI CAYNNNNRTG 4 cut(s) 320, 483, 595, 639
SmlI CTYRAG 1 cut(s) 1682
SmoI CTYRAG 1 cut(s) 1682
SspDI GGCGCC 1 cut(s) 557
SspI AATATT 1 cut(s) 382
SspMI CTAG 3 cut(s) 663, 684, 1515
StyD4I CCNGG 1 cut(s) 711
TaaI ACNGT 1 cut(s) 565
TaiI ACGT 4 cut(s) 10, 442, 502, 520
TaqI TCGA 6 cut(s) 44, 171, 567, 698, 1034, 1150
TaqII GACCGA 1 cut(s) 1745
TauI GCSGC 3 cut(s) 670, 707, 1238
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 4 cut(s) 159, 423, 620, 1464
Tru9I TTAA 4 cut(s) 159, 423, 620, 1464
TscAI CASTG 1 cut(s) 568
TseFI GTSAC 2 cut(s) 8, 1742
TseI GCWGC 6 cut(s) 539, 766, 780, 840, 904, 922
Tsp45I GTSAC 2 cut(s) 8, 1742
TspDTI ATGAA 8 cut(s) 236, 254, 338, 353, 1169, 1535, 1542, 1707
TspGWI ACGGA 2 cut(s) 450, 1223
TspRI CASTG 1 cut(s) 568
VneI GTGCAC 2 cut(s) 600, 609
VpaK11BI GGWCC 1 cut(s) 446
VspI ATTAAT 1 cut(s) 1464
XapI RAATTY 2 cut(s) 1201, 1675
XceI RCATGY 1 cut(s) 43
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 3 cut(s) 663, 684, 1515
ZraI GACGTC 1 cut(s) 8
Zsp2I ATGCAT 2 cut(s) 1053, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.