Rmu_sc0022773.1_g000001

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022773.1
Physical Location & Seq
Forward (+)
186 .. 452
267 bp
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UTR
Exon/CDS
Intron
Rmu_sc0022773.1_g000001.1.cds

Sequence Viewer

Length: 267 bp
atggcatcttccggaggatctaatgctactaatgaagtggatagatcattgaggcgtgggtcaacctatgttggatgggactttgcggtattggcggatccacacaacttagacaagttgaagtgtaagttgtgtgggaaagtggttagtggtggaatacatcgaatgaagcaacacattgccaacatcaagggaaatgttgcctcatgcaaacctcatgcaagaattctacggatgccgataaagccaaatgtatacccgcaatag

Protein Analysis

88

Amino Acids

9.61

Weight (kDa)

10.03

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000698)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G43260 AT5G31412
fragaria_vesca FvH4_2g24751 FvH4_3g29751 FvH4_3g29752 FvH4_3g32705 FvH4_4g20841 FvH4_5g39742 FvH4_6g06672 FvH4_6g28272 FvH4_6g28273 FvH4_7g00215
malus_domestica MD07G1147000.v1.1
prunus_persica Prupe.4G255800_v2.0.a1
pyrus_communis pycom09g15950 pycom10g13140
rosa_chinensis RchiOBHm_Chr1g0314441 RchiOBHm_Chr1g0314451 RchiOBHm_Chr4g0430441 RchiOBHm_Chr4g0430831 RchiOBHm_Chr5g0003001 RchiOBHm_Chr5g0033441 RchiOBHm_Chr6g0251571 RchiOBHm_Chr6g0288501
rosa_multiflora Rmu_co8007098.1_g000001 Rmu_co8211970.1_g000002 Rmu_sc0000146.1_g000031 Rmu_sc0000555.1_g000022 Rmu_sc0000968.1_g000005 Rmu_sc0001017.1_g000028 Rmu_sc0001208.1_g000044 Rmu_sc0001526.1_g000038 Rmu_sc0002226.1_g000026 Rmu_sc0002284.1_g000006 Rmu_sc0002776.1_g000004 Rmu_sc0003369.1_g000011 Rmu_sc0003632.1_g000005 Rmu_sc0004180.1_g000007 Rmu_sc0004180.1_g000008 Rmu_sc0005014.1_g000005 Rmu_sc0005023.1_g000011 Rmu_sc0007296.1_g000009 Rmu_sc0011153.1_g000002 Rmu_sc0011153.1_g000003 Rmu_sc0018472.1_g000003 Rmu_sc0020646.1_g000001 Rmu_sc0022773.1_g000001 Rmu_sc0022773.1_g000002 Rmu_sc0023555.1_g000001 Rmu_sc0023788.1_g000001 Rmu_ssc0000409.1_g000026 Rmu_ssc0000421.1_g000039
rosa_roxburghii Rroxscaffold_2G00091530 Rroxscaffold_5G00355490 Rroxscaffold_6G00405690 Rroxscaffold_6G00412290 Rroxscaffold_7G00195870
rosa_rugosa Rorug05G0244000
rosa_samantha Rh3DG075100
rosa_wichuraiana Rw0G014340 Rw1G023020 Rw2G020120 Rw2G033790 Rw2G035670 Rw3G022290 Rw3G023070 Rw3G023080 Rw4G003460 Rw4G017840 Rw4G032430 Rw5G024280 Rw5G044440 Rw6G027410 Rw7G020330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 255
AccIII TCCGGA 1 cut(s) 11
AciI CCGC 3 cut(s) 86, 95, 260
AclWI GGATC 3 cut(s) 25, 92, 105
AcsI RAATTY 1 cut(s) 225
AgsI TTSAA 1 cut(s) 121
AlwI GGATC 3 cut(s) 25, 92, 105
Aor13HI TCCGGA 1 cut(s) 11
ApoI RAATTY 1 cut(s) 225
BamHI GGATCC 1 cut(s) 97
BccI CCATC 1 cut(s) 69
BmiI GGNNCC 1 cut(s) 99
BmsI GCATC 2 cut(s) 14, 225
BsaWI WCCGGW 1 cut(s) 11
Bse3DI GCAATG 1 cut(s) 177
BseAI TCCGGA 1 cut(s) 11
BseGI GGATG 2 cut(s) 80, 240
BseMI GCAATG 1 cut(s) 177
BsiSI CCGG 1 cut(s) 12
BslFI GGGAC 1 cut(s) 92
BsmFI GGGAC 1 cut(s) 92
Bsp13I TCCGGA 1 cut(s) 11
Bsp143I GATC 3 cut(s) 17, 44, 97
BspACI CCGC 3 cut(s) 86, 95, 260
BspEI TCCGGA 1 cut(s) 11
BspLI GGNNCC 1 cut(s) 99
BspPI GGATC 3 cut(s) 25, 92, 105
BsrDI GCAATG 1 cut(s) 177
BssMI GATC 3 cut(s) 17, 44, 97
BssNAI GTATAC 1 cut(s) 256
Bst1107I GTATAC 1 cut(s) 256
BstDEI CTNAG 1 cut(s) 109
BstF5I GGATG 2 cut(s) 80, 240
BstKTI GATC 3 cut(s) 20, 47, 100
BstMBI GATC 3 cut(s) 17, 44, 97
BstMWI GCNNNNNNNGC 2 cut(s) 92, 244
BstX2I RGATCY 2 cut(s) 17, 97
BstYI RGATCY 2 cut(s) 17, 97
BstZ17I GTATAC 1 cut(s) 256
BtsCI GGATG 2 cut(s) 80, 240
CviAII CATG 2 cut(s) 207, 218
CviJI RGCY 1 cut(s) 247
CviKI_1 RGCY 1 cut(s) 247
DdeI CTNAG 1 cut(s) 109
DpnI GATC 3 cut(s) 19, 46, 99
DpnII GATC 3 cut(s) 17, 44, 97
EciI GGCGGA 1 cut(s) 110
EcoRI GAATTC 1 cut(s) 225
FaeI CATG 2 cut(s) 210, 221
FaiI YATR 4 cut(s) 69, 208, 219, 256
FaqI GGGAC 1 cut(s) 92
FatI CATG 2 cut(s) 206, 217
FblI GTMKAC 1 cut(s) 255
FokI GGATG 2 cut(s) 87, 247
HapII CCGG 1 cut(s) 12
Hin1II CATG 2 cut(s) 210, 221
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HpaII CCGG 1 cut(s) 12
Hpy166II GTNNAC 2 cut(s) 63, 256
Hpy188III TCNNGA 1 cut(s) 12
Hpy8I GTNNAC 2 cut(s) 63, 256
HpyCH4V TGCA 2 cut(s) 210, 221
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 244
HpyF3I CTNAG 1 cut(s) 109
Hsp92II CATG 2 cut(s) 210, 221
Kpn2I TCCGGA 1 cut(s) 11
Kzo9I GATC 3 cut(s) 17, 44, 97
LpnPI CCDG 1 cut(s) 25
LweI GCATC 2 cut(s) 14, 225
MalI GATC 3 cut(s) 19, 46, 99
MboI GATC 3 cut(s) 17, 44, 97
MflI RGATCY 2 cut(s) 17, 97
MluCI AATT 1 cut(s) 225
MmeI TCCRAC 1 cut(s) 52
MnlI CCTC 4 cut(s) 8, 45, 214, 225
MroI TCCGGA 1 cut(s) 11
MspI CCGG 1 cut(s) 12
MwoI GCNNNNNNNGC 2 cut(s) 92, 244
NdeII GATC 3 cut(s) 17, 44, 97
NlaIII CATG 2 cut(s) 210, 221
NlaIV GGNNCC 1 cut(s) 99
PspN4I GGNNCC 1 cut(s) 99
PsuI RGATCY 2 cut(s) 17, 97
Sau3AI GATC 3 cut(s) 17, 44, 97
SetI ASST 2 cut(s) 68, 217
SfaNI GCATC 2 cut(s) 14, 225
SgeI CNNG 7 cut(s) 24, 68, 127, 202, 219, 230, 234
Sse9I AATT 1 cut(s) 225
SsiI CCGC 3 cut(s) 86, 95, 260
TaqI TCGA 1 cut(s) 163
TasI AATT 1 cut(s) 225
TspDTI ATGAA 2 cut(s) 48, 182
TspGWI ACGGA 1 cut(s) 247
XapI RAATTY 1 cut(s) 225
XmiI GTMKAC 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.