RchiOBHm_Chr6g0251571

source UniProtKB

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000698
Physical Location & Seq
Reverse (-)
6835846 .. 6838031
2186 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22552

Sequence Viewer

Length: 1959 bp
ATGGCGGGTACCACATCTTCCTCGGCATCTAATCCAATTTCAGAGTTGGGTTCATCATTGAAGCGTGGTTTGGGTGATATTGGATGGGAATATGCGGAGTTGGCGGATGCCTCAAACTTGGATAGGTTGAAGTGTAAGTTATGTGGGAAATTAGTTAGTGGTGGGATATATCGAATGAAGCAACATATTGCCCACATCAAGGGAAATGTGGCTCCTTGTAAAAAGTCTTCGGATAAGGATAAAGCCAAATGCAAGAATGCTATTGAAGAGGCAAAGAGTAAGAAGAAACAAAAGAGTAGACATGAAGCAGAAGTGAGGCAAGAAGTCATTTTTGAAGGAGATGAAGACAATGAAGCGAGTCAAGGGACAAGAAGAATGCCGCATACTCTTGGGCCTATGGACCGTTTTGCAACCCCCATCGATCCGGATTCTTCATTGGATGGAAGTAGGAAAATGAGACAACAAAATATCAATGATGCACTTTTCAAGCAAAGAACACATAGTGTGCATCAATACTTGGCTAGATGGGTGTATGAAGCCGGGATTCCTTTTCATGCCGTTGATAGTGATAGCTTCAAGAGGTTTGTTGAAGTGGTTGGTCAATTTGGCCCGGGTTACCGACCTCCAAGCCAATATCAATTAAGGGAGCCATTATTGAAGGAAGAGGTAGAGAGAACTAAAAGTTTATTGAAGAAGCAAGAAGAAGAGTGGGCTTTGAATGGTTGCTCTATTATGACCGATGCTTGGAGCGACCGGAAAAGAAGAAGTATCATGAATTTGTGTGTCAATTGTGCGGAAGGCACAACTTTTCTTTCTTCTAAGGAAGCATCGGATGAGGCACACACCGGGACGTATATTTTTGAATATGTGGACAAATGCATTGAAGATGTTGGACCACAAAATGTGGTTCAAGTGGTGACGGACAATGCTTCAAATAATATGGCGGCGATAGATTTGATGAAGTTGAAGAGGCCAAACATATTTTGGACTTCATGTGCAACTCACACCTTGAATCTTATGCTTCAAGGAATTGGCAACCAACCTAGATTCAAAGGGGTGATTGAGAGGGCAAAGAGCTTCACCATCTATATTTATGCACATCACAAGACTTTGGCATTGATGAGGAAGTTTACAAAGAAAAGAGATATAGTGAGGCCGGGAGTCACTAGATTTGCAACAGCTTTCCTCACTTTGCAAAGCTTGATGGAGAAGAAGAATGAGTTGAGAGCTATGATTACTAGTGATGAATGGAATGAAAGCAAGCATGCAAAGAGTGTAAAGGGGAAGGCGGCGATGAATATTGCTTTGAGTGCTTCTTTTTGGAATGGGGTAAGTCTTTGCTTGAAGGTGTTTGCCCCTTTAGTCAAGGTGCTTCGCCTTGTTGATGGGGATAGAAAGCCATCAATGGGCTTTGTGTATGGAGAACTACTTAGAGCCAAGGAGGAGATTAAAATGGCATTCAAAGATCAAGAAACTCACTATCGTCCCATCCTTGACATTGTTGATGGAAAAGCCCGTGGTCGACTTGATAGTCCATTGCATTTAGCGGGTTACCTCTTGAACCCTTACTACACATATGCCAATCCAGGTCTTGAGAATGATAATGTGGTCATGGATGGGTTCTTCACTTGTGTTGAGACATTCTTTCCTGATGACATTCAAACTCAAAGTTTGGTGACAAATGTAGAATTGCACAAGTATTTGAAGAAAGATGATGGATTTGGAAGAGGTTTGGCAAAGGCGGGATGCGCACAAAATGATGACACTTATAATCCGGTTTTGTGGTGGAATATTTATGGAAACCTTGTACCAAGATTGCAAAGTATGGCTAAAAGGATACTTTCATTGACCACAAGCTCATCCGGATGTGAGAGAAATTGGAGCGCTTTTGAGGAGATCTATACAAAGAAAAGGAATAGACTAGATACAACGAGGTTGAACAATTTAGTTTATGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT

Protein Analysis

652

Amino Acids

73.72

Weight (kDa)

9.11

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 209 - 359 3e-57 Domain of unknown function (DUF659)
Dimer_Tnp_hAT PF05699 584 - 651 3.8e-12 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000698)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G43260 AT5G31412
fragaria_vesca FvH4_2g24751 FvH4_3g29751 FvH4_3g29752 FvH4_3g32705 FvH4_4g20841 FvH4_5g39742 FvH4_6g06672 FvH4_6g28272 FvH4_6g28273 FvH4_7g00215
malus_domestica MD07G1147000.v1.1
prunus_persica Prupe.4G255800_v2.0.a1
pyrus_communis pycom09g15950 pycom10g13140
rosa_chinensis RchiOBHm_Chr1g0314441 RchiOBHm_Chr1g0314451 RchiOBHm_Chr4g0430441 RchiOBHm_Chr4g0430831 RchiOBHm_Chr5g0003001 RchiOBHm_Chr5g0033441 RchiOBHm_Chr6g0251571 RchiOBHm_Chr6g0288501
rosa_multiflora Rmu_co8007098.1_g000001 Rmu_co8211970.1_g000002 Rmu_sc0000146.1_g000031 Rmu_sc0000555.1_g000022 Rmu_sc0000968.1_g000005 Rmu_sc0001017.1_g000028 Rmu_sc0001208.1_g000044 Rmu_sc0001526.1_g000038 Rmu_sc0002226.1_g000026 Rmu_sc0002284.1_g000006 Rmu_sc0002776.1_g000004 Rmu_sc0003369.1_g000011 Rmu_sc0003632.1_g000005 Rmu_sc0004180.1_g000007 Rmu_sc0004180.1_g000008 Rmu_sc0005014.1_g000005 Rmu_sc0005023.1_g000011 Rmu_sc0007296.1_g000009 Rmu_sc0011153.1_g000002 Rmu_sc0011153.1_g000003 Rmu_sc0018472.1_g000003 Rmu_sc0020646.1_g000001 Rmu_sc0022773.1_g000001 Rmu_sc0022773.1_g000002 Rmu_sc0023555.1_g000001 Rmu_sc0023788.1_g000001 Rmu_ssc0000409.1_g000026 Rmu_ssc0000421.1_g000039
rosa_roxburghii Rroxscaffold_2G00091530 Rroxscaffold_5G00355490 Rroxscaffold_6G00405690 Rroxscaffold_6G00412290 Rroxscaffold_7G00195870
rosa_rugosa Rorug05G0244000
rosa_samantha Rh3DG075100
rosa_wichuraiana Rw0G014340 Rw1G023020 Rw2G020120 Rw2G033790 Rw2G035670 Rw3G022290 Rw3G023070 Rw3G023080 Rw4G003460 Rw4G017840 Rw4G032430 Rw5G024280 Rw5G044440 Rw6G027410 Rw7G020330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1770
AasI GACNNNNNNGTC 1 cut(s) 1530
Acc16I TGCGCA 1 cut(s) 1750
Acc65I GGTACC 1 cut(s) 8
AccB1I GGYRCC 1 cut(s) 8
AccI GTMKAC 2 cut(s) 298, 1522
AccIII TCCGGA 2 cut(s) 424, 1862
AciI CCGC 9 cut(s) 5, 95, 104, 380, 794, 944, 1289, 1547, 1742
AclWI GGATC 1 cut(s) 416
AcsI RAATTY 1 cut(s) 775
AdeI CACNNNGTG 1 cut(s) 503
AfaI GTAC 2 cut(s) 10, 1809
AfeI AGCGCT 1 cut(s) 1885
AfiI CCNNNNNNNGG 3 cut(s) 199, 744, 1406
AhlI ACTAGT 1 cut(s) 1238
AjnI CCWGG 1 cut(s) 1585
AjuI GAANNNNNNNTTGG 2 cut(s) 53, 85
AluBI AGCT 6 cut(s) 573, 1077, 1181, 1200, 1229, 1857
AluI AGCT 6 cut(s) 573, 1077, 1181, 1200, 1229, 1857
Alw26I GTCTC 2 cut(s) 451, 1631
AlwI GGATC 1 cut(s) 416
Ama87I CYCGRG 1 cut(s) 610
Aor13HI TCCGGA 2 cut(s) 424, 1862
Aor51HI AGCGCT 1 cut(s) 1885
AoxI GGCC 4 cut(s) 392, 607, 971, 1154
ApoI RAATTY 1 cut(s) 775
Asp718I GGTACC 1 cut(s) 8
AspLEI GCGC 2 cut(s) 1751, 1886
AspS9I GGNCC 4 cut(s) 392, 400, 608, 893
AsuC2I CCSGG 5 cut(s) 541, 611, 612, 847, 1158
AsuHPI GGTGA 5 cut(s) 86, 928, 1069, 1072, 1687
AvaI CYCGRG 1 cut(s) 610
AvaII GGWCC 2 cut(s) 400, 893
BanI GGYRCC 1 cut(s) 8
BarI GAAGNNNNNNTAC 3 cut(s) 33, 211, 243
BbsI GAAGAC 2 cut(s) 219, 351
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 1 cut(s) 1587
BciVI GTATCC 1 cut(s) 1830
BcnI CCSGG 5 cut(s) 541, 611, 612, 847, 1158
BcoDI GTCTC 2 cut(s) 451, 1631
BcuI ACTAGT 1 cut(s) 1238
BfaI CTAG 5 cut(s) 522, 1044, 1167, 1239, 1922
BfoI RGCGCY 1 cut(s) 1887
BfuI GTATCC 1 cut(s) 1830
BglII AGATCT 1 cut(s) 1896
BisI GCNGC 3 cut(s) 380, 945, 1290
BlsI GCNGC 3 cut(s) 381, 946, 1291
Bme1390I CCNGG 6 cut(s) 541, 611, 612, 847, 1158, 1587
Bme18I GGWCC 2 cut(s) 400, 893
BmeT110I CYCGRG 1 cut(s) 610
BmgT120I GGNCC 4 cut(s) 392, 400, 608, 893
BmiI GGNNCC 3 cut(s) 10, 213, 648
BmrFI CCNGG 6 cut(s) 541, 611, 612, 847, 1158, 1587
BmsI GCATC 7 cut(s) 35, 97, 466, 517, 730, 836, 1736
BpiI GAAGAC 2 cut(s) 219, 351
BpuEI CTTGAG 1 cut(s) 1613
BpuMI CCSGG 5 cut(s) 541, 611, 612, 847, 1158
Bsa29I ATCGAT 1 cut(s) 420
BsaJI CCNNGG 4 cut(s) 21, 610, 1437, 1516
BsaWI WCCGGW 4 cut(s) 424, 753, 1774, 1862
Bsc4I CCNNNNNNNGG 3 cut(s) 199, 744, 1406
Bse3DI GCAATG 1 cut(s) 1535
BseAI TCCGGA 2 cut(s) 424, 1862
BseBI CCWGG 1 cut(s) 1587
BseCI ATCGAT 1 cut(s) 420
BseDI CCNNGG 4 cut(s) 21, 610, 1437, 1516
BseGI GGATG 9 cut(s) 89, 112, 445, 838, 1488, 1621, 1751, 1859, 1871
BseLI CCNNNNNNNGG 3 cut(s) 199, 744, 1406
BseMI GCAATG 1 cut(s) 1535
BseRI GAGGAG 2 cut(s) 1457, 1907
Bsh1285I CGRYCG 1 cut(s) 754
BshFI GGCC 4 cut(s) 394, 609, 973, 1156
BshNI GGYRCC 1 cut(s) 8
BshVI ATCGAT 1 cut(s) 420
BsiEI CGRYCG 1 cut(s) 754
BsiHKCI CYCGRG 1 cut(s) 610
BsiSI CCGG 8 cut(s) 425, 540, 611, 754, 846, 1157, 1775, 1863
BslFI GGGAC 3 cut(s) 379, 862, 1470
BslI CCNNNNNNNGG 3 cut(s) 199, 744, 1406
BsmAI GTCTC 2 cut(s) 451, 1631
BsmFI GGGAC 3 cut(s) 379, 862, 1470
BsmI GAATGC 3 cut(s) 262, 381, 1457
BsnI GGCC 4 cut(s) 394, 609, 973, 1156
BsoBI CYCGRG 1 cut(s) 610
Bsp13I TCCGGA 2 cut(s) 424, 1862
Bsp143I GATC 3 cut(s) 421, 1465, 1896
BspACI CCGC 9 cut(s) 5, 95, 104, 380, 794, 944, 1289, 1547, 1742
BspANI GGCC 4 cut(s) 394, 609, 973, 1156
BspDI ATCGAT 1 cut(s) 420
BspEI TCCGGA 2 cut(s) 424, 1862
BspHI TCATGA 1 cut(s) 771
BspLI GGNNCC 3 cut(s) 10, 213, 648
BspPI GGATC 1 cut(s) 416
BspT107I GGYRCC 1 cut(s) 8
BsrDI GCAATG 1 cut(s) 1535
BssECI CCNNGG 4 cut(s) 21, 610, 1437, 1516
BssMI GATC 3 cut(s) 421, 1465, 1896
BssT1I CCWWGG 1 cut(s) 1437
Bst2UI CCWGG 1 cut(s) 1587
Bst4CI ACNGT 1 cut(s) 404
Bst6I CTCTTC 5 cut(s) 261, 657, 699, 962, 1720
BstC8I GCNNGC 2 cut(s) 1262, 1266
BstDEI CTNAG 2 cut(s) 819, 1430
BstDSI CCRYGG 1 cut(s) 1516
BstEII GGTNACC 2 cut(s) 614, 1550
BstF5I GGATG 9 cut(s) 89, 112, 445, 838, 1488, 1621, 1751, 1859, 1871
BstH2I RGCGCY 1 cut(s) 1887
BstHHI GCGC 2 cut(s) 1751, 1886
BstKTI GATC 3 cut(s) 424, 1468, 1899
BstMAI GTCTC 2 cut(s) 451, 1631
BstMBI GATC 3 cut(s) 421, 1465, 1896
BstMCI CGRYCG 1 cut(s) 754
BstMWI GCNNNNNNNGC 3 cut(s) 101, 1310, 1748
BstNI CCWGG 1 cut(s) 1587
BstNSI RCATGY 1 cut(s) 1268
BstPI GGTNACC 2 cut(s) 614, 1550
BstSCI CCNGG 6 cut(s) 539, 609, 610, 845, 1156, 1585
BstV2I GAAGAC 2 cut(s) 219, 351
BstX2I RGATCY 1 cut(s) 1896
BstYI RGATCY 1 cut(s) 1896
Bsu15I ATCGAT 1 cut(s) 420
BsuI GTATCC 1 cut(s) 1830
BsuRI GGCC 4 cut(s) 394, 609, 973, 1156
BsuTUI ATCGAT 1 cut(s) 420
BtgI CCRYGG 1 cut(s) 1516
BtgZI GCGATG 1 cut(s) 1307
BtsCI GGATG 9 cut(s) 89, 112, 445, 838, 1488, 1621, 1751, 1859, 1871
Cac8I GCNNGC 2 cut(s) 1262, 1266
CciI TCATGA 1 cut(s) 771
CfoI GCGC 2 cut(s) 1751, 1886
Cfr13I GGNCC 4 cut(s) 392, 400, 608, 893
Cfr9I CCCGGG 1 cut(s) 610
ClaI ATCGAT 1 cut(s) 420
Csp6I GTAC 2 cut(s) 9, 1808
CviAII CATG 6 cut(s) 302, 554, 772, 993, 1265, 1612
CviQI GTAC 2 cut(s) 9, 1808
DdeI CTNAG 2 cut(s) 819, 1430
DpnI GATC 3 cut(s) 423, 1467, 1898
DpnII GATC 3 cut(s) 421, 1465, 1896
DraIII CACNNNGTG 1 cut(s) 503
DrdI GACNNNNNNGTC 1 cut(s) 1530
DseDI GACNNNNNNGTC 1 cut(s) 1530
Eam1104I CTCTTC 5 cut(s) 261, 657, 699, 962, 1720
EarI CTCTTC 5 cut(s) 261, 657, 699, 962, 1720
EciI GGCGGA 1 cut(s) 119
Eco130I CCWWGG 1 cut(s) 1437
Eco47I GGWCC 2 cut(s) 400, 893
Eco47III AGCGCT 1 cut(s) 1885
Eco88I CYCGRG 1 cut(s) 610
Eco91I GGTNACC 2 cut(s) 614, 1550
EcoO65I GGTNACC 2 cut(s) 614, 1550
EcoRII CCWGG 1 cut(s) 1585
EcoT14I CCWWGG 1 cut(s) 1437
EcoT22I ATGCAT 1 cut(s) 881
ErhI CCWWGG 1 cut(s) 1437
FaeI CATG 6 cut(s) 305, 557, 775, 996, 1268, 1615
FaqI GGGAC 3 cut(s) 379, 862, 1470
FatI CATG 6 cut(s) 301, 553, 771, 992, 1264, 1611
FauI CCCGC 2 cut(s) 1540, 1735
FauNDI CATATG 1 cut(s) 1576
FblI GTMKAC 2 cut(s) 298, 1522
Fnu4HI GCNGC 3 cut(s) 380, 945, 1290
FokI GGATG 9 cut(s) 96, 119, 452, 845, 1475, 1628, 1758, 1846, 1878
Fsp4HI GCNGC 3 cut(s) 380, 945, 1290
FspAI RTGCGCAY 1 cut(s) 1750
FspBI CTAG 5 cut(s) 522, 1044, 1167, 1239, 1922
FspI TGCGCA 1 cut(s) 1750
GlaI GCGC 2 cut(s) 1750, 1885
GluI GCNGC 3 cut(s) 380, 945, 1290
HaeII RGCGCY 1 cut(s) 1887
HaeIII GGCC 4 cut(s) 394, 609, 973, 1156
HapII CCGG 8 cut(s) 425, 540, 611, 754, 846, 1157, 1775, 1863
HhaI GCGC 2 cut(s) 1751, 1886
Hin1II CATG 6 cut(s) 305, 557, 775, 996, 1268, 1615
Hin6I GCGC 2 cut(s) 1749, 1884
HinP1I GCGC 2 cut(s) 1749, 1884
HincII GTYRAC 1 cut(s) 1523
HindII GTYRAC 1 cut(s) 1523
HindIII AAGCTT 1 cut(s) 1198
HinfI GANTC 6 cut(s) 358, 428, 544, 1012, 1047, 1161
HpaII CCGG 8 cut(s) 425, 540, 611, 754, 846, 1157, 1775, 1863
HphI GGTGA 5 cut(s) 86, 928, 1069, 1072, 1687
Hpy166II GTNNAC 4 cut(s) 299, 871, 1131, 1523
Hpy188I TCNGA 3 cut(s) 43, 232, 832
Hpy188III TCNNGA 8 cut(s) 425, 577, 772, 1469, 1558, 1592, 1649, 1863
Hpy8I GTNNAC 4 cut(s) 299, 871, 1131, 1523
HpyAV CCTTC 5 cut(s) 329, 652, 791, 1279, 1339
HpyCH4III ACNGT 1 cut(s) 404
HpyCH4IV ACGT 1 cut(s) 851
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 1310, 1748
HpyF3I CTNAG 2 cut(s) 819, 1430
HpySE526I ACGT 1 cut(s) 851
Hsp92II CATG 6 cut(s) 305, 557, 775, 996, 1268, 1615
HspAI GCGC 2 cut(s) 1749, 1884
Kpn2I TCCGGA 2 cut(s) 424, 1862
KpnI GGTACC 1 cut(s) 12
Kzo9I GATC 3 cut(s) 421, 1465, 1896
LmnI GCTCC 4 cut(s) 217, 646, 747, 1881
LweI GCATC 7 cut(s) 35, 97, 466, 517, 730, 836, 1736
MaeI CTAG 5 cut(s) 522, 1044, 1167, 1239, 1922
MaeII ACGT 1 cut(s) 851
MaeIII GTNAC 5 cut(s) 614, 916, 1162, 1550, 1675
MalI GATC 3 cut(s) 423, 1467, 1898
MboI GATC 3 cut(s) 421, 1465, 1896
MfeI CAATTG 1 cut(s) 787
MflI RGATCY 1 cut(s) 1896
MlyI GAGTC 2 cut(s) 367, 1170
MmeI TCCRAC 1 cut(s) 871
Mph1103I ATGCAT 1 cut(s) 881
MroI TCCGGA 2 cut(s) 424, 1862
MseI TTAA 2 cut(s) 641, 1449
MslI CAYNNNNRTG 1 cut(s) 1864
MspI CCGG 8 cut(s) 425, 540, 611, 754, 846, 1157, 1775, 1863
MspR9I CCNGG 6 cut(s) 541, 611, 612, 847, 1158, 1587
MunI CAATTG 1 cut(s) 787
Mva1269I GAATGC 3 cut(s) 262, 381, 1457
MvaI CCWGG 1 cut(s) 1587
MwoI GCNNNNNNNGC 3 cut(s) 101, 1310, 1748
NciI CCSGG 5 cut(s) 541, 611, 612, 847, 1158
NdeI CATATG 1 cut(s) 1576
NdeII GATC 3 cut(s) 421, 1465, 1896
NlaIII CATG 6 cut(s) 305, 557, 775, 996, 1268, 1615
NlaIV GGNNCC 3 cut(s) 10, 213, 648
NmuCI GTSAC 3 cut(s) 916, 1162, 1675
NsbI TGCGCA 1 cut(s) 1750
NsiI ATGCAT 1 cut(s) 881
NspI RCATGY 1 cut(s) 1268
PaeI GCATGC 1 cut(s) 1268
PagI TCATGA 1 cut(s) 771
PctI GAATGC 3 cut(s) 262, 381, 1457
PfeI GAWTC 4 cut(s) 428, 544, 1012, 1047
PkrI GCNGC 3 cut(s) 381, 946, 1291
PleI GAGTC 2 cut(s) 366, 1169
PpsI GAGTC 2 cut(s) 366, 1169
PsiI TTATAA 1 cut(s) 1770
Psp6I CCWGG 1 cut(s) 1585
PspEI GGTNACC 2 cut(s) 614, 1550
PspGI CCWGG 1 cut(s) 1585
PspN4I GGNNCC 3 cut(s) 10, 213, 648
PspPI GGNCC 4 cut(s) 392, 400, 608, 893
PsrI GAACNNNNNNTAC 2 cut(s) 1553, 1585
PsuI RGATCY 1 cut(s) 1896
RsaI GTAC 2 cut(s) 10, 1809
RsaNI GTAC 2 cut(s) 9, 1808
RseI CAYNNNNRTG 1 cut(s) 1864
SalI GTCGAC 1 cut(s) 1521
SaqAI TTAA 2 cut(s) 641, 1449
SatI GCNGC 3 cut(s) 380, 945, 1290
Sau3AI GATC 3 cut(s) 421, 1465, 1896
Sau96I GGNCC 4 cut(s) 392, 400, 608, 893
SchI GAGTC 2 cut(s) 367, 1170
ScrFI CCNGG 6 cut(s) 541, 611, 612, 847, 1158, 1587
SfaNI GCATC 7 cut(s) 35, 97, 466, 517, 730, 836, 1736
SinI GGWCC 2 cut(s) 400, 893
SmaI CCCGGG 1 cut(s) 612
SmiMI CAYNNNNRTG 1 cut(s) 1864
SmlI CTYRAG 1 cut(s) 1592
SmoI CTYRAG 1 cut(s) 1592
SpeI ACTAGT 1 cut(s) 1238
SphI GCATGC 1 cut(s) 1268
SsiI CCGC 9 cut(s) 5, 95, 104, 380, 794, 944, 1289, 1547, 1742
SspI AATATT 2 cut(s) 1300, 1792
SspMI CTAG 5 cut(s) 522, 1044, 1167, 1239, 1922
StyD4I CCNGG 6 cut(s) 539, 609, 610, 845, 1156, 1585
StyI CCWWGG 1 cut(s) 1437
TaaI ACNGT 1 cut(s) 404
TaiI ACGT 1 cut(s) 854
TaqI TCGA 3 cut(s) 172, 420, 1522
TaqII GACCGA 1 cut(s) 752
TauI GCSGC 3 cut(s) 382, 947, 1292
TfiI GAWTC 4 cut(s) 428, 544, 1012, 1047
Tru1I TTAA 2 cut(s) 641, 1449
Tru9I TTAA 2 cut(s) 641, 1449
TseFI GTSAC 3 cut(s) 916, 1162, 1675
Tsp45I GTSAC 3 cut(s) 916, 1162, 1675
TspGWI ACGGA 1 cut(s) 935
TspMI CCCGGG 1 cut(s) 610
VpaK11BI GGWCC 2 cut(s) 400, 893
XapI RAATTY 1 cut(s) 775
XceI RCATGY 1 cut(s) 1268
XcmI CCANNNNNNNNNTGG 1 cut(s) 981
XmaI CCCGGG 1 cut(s) 610
XmiI GTMKAC 2 cut(s) 298, 1522
XspI CTAG 5 cut(s) 522, 1044, 1167, 1239, 1922
Zsp2I ATGCAT 1 cut(s) 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.