FvH4_6g43961

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000449
Physical Location & Seq
Reverse (-)
33944071 .. 33946365
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g43961.t1

Sequence Viewer

Length: 1638 bp
ATGACCGTGGTAACTTTCGTTGATGAACAAGTCGATGTGGAGCTGACGCGCCTTGAGGCGTGTCAAGGCGCAGTGGATCCACGTGTGGACCTTGATGCCGTAGCCTTTTTCGAAGATGAAGGAGAGGCGGAAGGTGTGGATGTGGGAGTCTGGGCGGAGAATGAGAGTGTGATCGACGAAGTCGGCGAAGAATTGGGCTTGATTCGTGTCGGAATACAAGCCGGCGGCGAGAGGGAAGAGCTCGTCGGAGAAGTTCAAGGAGGGAACGAGGGACCAGAGGAGTCGCCATTTACGGGAGACGAGAGAGGTGGTGACGGCGTCGAGGGTGGGGAAGAAGGAGAGGATGTGGAGGAGGATCTCGTCGGGGAGGTCGTTGAGGCTCCGGTTTGGGCAGCGGAGGCGTTTGGCGTAGAGGAAGAGGACTTGACTGCTCAAGCAGCAGAAGCCGTAGCCAATATGGAAGAGCTCCTGACGCAGATCCTTGAGTCGGTGCCATTACGATCTCTTGCTCGTTTCAAGTGCGTCTCCAAGCATTGGCAATCTCTCATCAACAACCTCCGCACCCTCAGAAACCCCAGGAAGAAACCCCAGGAAGTTGGCTTTCGTCTCAAGAAAAACCGATTCCAGATTAACGATCGCTTCCGAGACGATGACGTCCCTAGGTTGAAGATTATCCAGTCCTGCAATGGCCTCTTTCTCTGCCGTGTTCCTGAAGGCAGAAGCAGAAAAGTAAACGGTTACATGGTAATAAGAAGTCAACATCGTGGCGTATATGTTGTCAATCCCACGACCAAACAATTATTGCGTCTTTGTTCTCCGACCTCTTGGTTTAGCACTTGGGAAAGTTATTCTTTGGCTTTTGAACCTTCCAAATCTCCACATTACACGTCAGTCTGCGTGACCGCGCACCATGAAAGTTCTTCAAGTCCCGGAAAAGTACATATATATTCGTCTAAGACTCGAAAGTGGAAACATGTTACTGATATGCCTTCCTCCCCGAGTTACGGGGAGGAGCCTGTATACTGCAACGACGCAGTTCATTGGATAAGAGACACAACAAGATTATCATTCTGCAACAAAACTGGTAACTTCTTTAGGGAAGAATCAGATGTTTTGCACTACTTTGACATTGGTGAAGAAAGTTTTCGAGTCGGGGCTGCTACTCCTCCTGTTCCCATGGTTGTGAAAAACATTCAGGTGAAGGAGTGTCGTGATGGCGGAAAGAGTCCCATTGAGTTTCCGAGAATGTTTCATAGATACTTTGGGGAATGCAGTGGCCGTTTGTACTTGATTGAGATTTATAGTCATTGTAAAACTCAGTTTGATGTGGTGGAGATGGAGAAGGACTACTCTGGTTGGTTTGTCAAGTATCATGTTGATCTCAATCCGATGGCTCTTCCCCAACGTGATTTGGATCCTTTTGTTATATTGTGCCTTTCTTGTGAGACTGAGAGGGGAAAGGATGATGAAGTCGGGGATTCTTCGACTATTCTGCTGTTGCATATGCCCGGTAAGGTCATATCTTATGATCTCAGGAATAAGAACTTCATGACATCTTCTGAGGTAGCTATAGAGGATACTAAAATGTATCATGAATTTGATAATTATCCCTACATGGAGACTTTGGCTTGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

546

Amino Acids

61.63

Weight (kDa)

4.82

Isoelectric Point (pI)

51.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 154 - 188 3e-07 F-box domain
FBA_1 PF07734 220 - 384 6.7e-10 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 244 - 453 5.9e-07 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000449)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12890 FvH4_4g01370 FvH4_4g01420 FvH4_4g01430 FvH4_4g01472 FvH4_4g01490 FvH4_6g31140 FvH4_6g31150 FvH4_6g31161 FvH4_6g43941 FvH4_6g43961
rosa_chinensis RchiOBHm_Chr4g0387951 RchiOBHm_Chr4g0388001 RchiOBHm_Chr4g0388011 RchiOBHm_Chr4g0388051 RchiOBHm_Chr4g0388631 RchiOBHm_Chr4g0388641 RchiOBHm_Chr4g0388661 RchiOBHm_Chr4g0388801
rosa_laevigata RLG00000010028 RLG00000010030 RLG00000010032 RLG00000010082 RLG00000010086 RLG00000010089 RLG00000010091 RLG00000014277
rosa_multiflora Rmu_co8138914.1_g000001 Rmu_sc0000697.1_g000015 Rmu_sc0002180.1_g000030 Rmu_sc0002509.1_g000011 Rmu_sc0002509.1_g000012 Rmu_sc0002509.1_g000020 Rmu_sc0002509.1_g000021 Rmu_sc0004459.1_g000003 Rmu_sc0004459.1_g000005 Rmu_sc0006767.1_g000007 Rmu_sc0014755.1_g000003 Rmu_sc0014755.1_g000004 Rmu_sc0036097.1_g000001
rosa_roxburghii Rroxscaffold_2G00089440 Rroxscaffold_3G00220040 Rroxscaffold_5G00334500 Rroxscaffold_5G00334530 Rroxscaffold_5G00334540 Rroxscaffold_5G00335080
rosa_rugosa Rorug02G0485300 Rorug03G0314100 Rorug03G0314200 Rorug03G0314500 Rorug03G0314500 Rorug03G0314600 Rorug03G0319800 Rorug03G0319900 Rorug03G0320000 Rorug06G0011400
rosa_samantha Rh4AG019700 Rh4AG019900 Rh4AG020200 Rh4AG023900 Rh4AG024000 Rh4AG024700 Rh4BG013900 Rh4BG014100 Rh4BG014200 Rh4BG014300 Rh4BG014400 Rh4BG014500 Rh4BG014600 Rh4BG014700 Rh4BG017100 Rh4BG017400 Rh4BG017500 Rh4BG017600 Rh4BG017700 Rh4BG089200 Rh4DG014500 Rh4DG014800 Rh4DG014900 Rh4DG015400 Rh4DG017900 Rh4DG018000 Rh6BG127900 Rh6CG126300 Rh6DG113400
rosa_wichuraiana Rw4G001270 Rw4G001320 Rw4G001350 Rw4G001700 Rw4G001710 Rw4G001720 Rw4G001760 Rw6G011430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 653
AatII GACGTC 1 cut(s) 657
AccB1I GGYRCC 1 cut(s) 490
AccB7I CCANNNNNTGG 1 cut(s) 534
AccI GTMKAC 1 cut(s) 1020
AccII CGCG 2 cut(s) 49, 905
AciI CCGC 7 cut(s) 128, 155, 225, 395, 559, 903, 1218
AclWI GGATC 6 cut(s) 71, 84, 363, 472, 1409, 1422
AcoI YGGCCR 1 cut(s) 1276
AcsI RAATTY 1 cut(s) 1595
AcuI CTGAAG 1 cut(s) 732
AcvI CACGTG 1 cut(s) 83
AcyI GRCGYC 2 cut(s) 318, 654
AfaI GTAC 2 cut(s) 939, 1286
AfiI CCNNNNNNNGG 4 cut(s) 293, 487, 534, 1004
AflIII ACRYGT 3 cut(s) 82, 885, 973
AgsI TTSAA 5 cut(s) 257, 517, 667, 863, 924
AjiI CACGTC 1 cut(s) 888
AjnI CCWGG 2 cut(s) 575, 588
AluBI AGCT 4 cut(s) 43, 241, 466, 1568
AluI AGCT 4 cut(s) 43, 241, 466, 1568
Alw21I GWGCWC 2 cut(s) 243, 468
Alw26I GTCTC 7 cut(s) 291, 529, 611, 639, 1044, 1439, 1613
AlwI GGATC 6 cut(s) 71, 84, 363, 472, 1409, 1422
Ama87I CYCGRG 1 cut(s) 997
AoxI GGCC 2 cut(s) 688, 1276
ApeKI GCWGC 3 cut(s) 392, 437, 1157
ApoI RAATTY 1 cut(s) 1595
Asp700I GAANNNNTTC 1 cut(s) 1143
AspA2I CCTAGG 1 cut(s) 659
AspLEI GCGC 3 cut(s) 51, 71, 907
AspS9I GGNCC 2 cut(s) 88, 272
AsuC2I CCSGG 2 cut(s) 930, 1509
AsuHPI GGTGA 3 cut(s) 323, 1145, 1210
AsuII TTCGAA 1 cut(s) 111
AvaI CYCGRG 1 cut(s) 997
AvaII GGWCC 2 cut(s) 88, 272
AvrII CCTAGG 1 cut(s) 659
BamHI GGATCC 2 cut(s) 76, 1414
BanI GGYRCC 1 cut(s) 490
BanII GRGCYC 2 cut(s) 243, 468
BbrPI CACGTG 1 cut(s) 83
Bbv12I GWGCWC 2 cut(s) 243, 468
BbvI GCAGC 3 cut(s) 404, 449, 1144
BccI CCATC 3 cut(s) 1208, 1330, 1384
BceAI ACGGC 5 cut(s) 83, 331, 431, 687, 1263
BcgI CGANNNNNNTGC 2 cut(s) 1474, 1508
BciT130I CCWGG 2 cut(s) 577, 590
BciVI GTATCC 1 cut(s) 1570
BcnI CCSGG 2 cut(s) 930, 1509
BcoDI GTCTC 7 cut(s) 291, 529, 611, 639, 1044, 1439, 1613
BfaI CTAG 1 cut(s) 660
BfmI CTRYAG 1 cut(s) 1569
BfuI GTATCC 1 cut(s) 1570
BisI GCNGC 4 cut(s) 226, 393, 438, 1158
BlnI CCTAGG 1 cut(s) 659
BlsI GCNGC 4 cut(s) 227, 394, 439, 1159
Bme1390I CCNGG 4 cut(s) 577, 590, 930, 1509
Bme18I GGWCC 2 cut(s) 88, 272
BmeT110I CYCGRG 1 cut(s) 997
BmgBI CACGTC 1 cut(s) 888
BmgT120I GGNCC 2 cut(s) 88, 272
BmiI GGNNCC 6 cut(s) 78, 273, 381, 492, 1014, 1416
BmrFI CCNGG 4 cut(s) 577, 590, 930, 1509
BmsI GCATC 1 cut(s) 85
Bpu14I TTCGAA 1 cut(s) 111
BpuEI CTTGAG 4 cut(s) 74, 417, 503, 593
BpuMI CCSGG 2 cut(s) 930, 1509
BsaAI YACGTR 1 cut(s) 83
BsaBI GATNNNNATC 3 cut(s) 1383, 1413, 1605
BsaHI GRCGYC 2 cut(s) 318, 654
BsaJI CCNNGG 5 cut(s) 6, 575, 588, 659, 1176
BsaWI WCCGGW 1 cut(s) 382
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 4 cut(s) 293, 487, 534, 1004
Bse118I RCCGGY 1 cut(s) 221
Bse1I ACTGG 2 cut(s) 676, 1087
Bse3DI GCAATG 1 cut(s) 691
Bse8I GATNNNNATC 3 cut(s) 1383, 1413, 1605
BseBI CCWGG 2 cut(s) 577, 590
BseDI CCNNGG 5 cut(s) 6, 575, 588, 659, 1176
BseGI GGATG 3 cut(s) 145, 349, 1468
BseJI GATNNNNATC 3 cut(s) 1383, 1413, 1605
BseLI CCNNNNNNNGG 4 cut(s) 293, 487, 534, 1004
BseMI GCAATG 1 cut(s) 691
BseMII CTCAG 5 cut(s) 580, 1331, 1440, 1546, 1551
BseNI ACTGG 2 cut(s) 676, 1087
BseRI GAGGAG 4 cut(s) 293, 365, 1025, 1155
BseXI GCAGC 3 cut(s) 404, 449, 1144
Bsh1236I CGCG 2 cut(s) 49, 905
Bsh1285I CGRYCG 1 cut(s) 637
BshFI GGCC 2 cut(s) 690, 1278
BshNI GGYRCC 1 cut(s) 490
BsiEI CGRYCG 1 cut(s) 637
BsiHKAI GWGCWC 2 cut(s) 243, 468
BsiHKCI CYCGRG 1 cut(s) 997
BsiSI CCGG 4 cut(s) 222, 383, 930, 1509
BslFI GGGAC 4 cut(s) 285, 641, 912, 1212
BslI CCNNNNNNNGG 4 cut(s) 293, 487, 534, 1004
BsmAI GTCTC 7 cut(s) 291, 529, 611, 639, 1044, 1439, 1613
BsmBI CGTCTC 4 cut(s) 291, 529, 611, 639
BsmFI GGGAC 4 cut(s) 285, 641, 912, 1212
BsmI GAATGC 1 cut(s) 1274
BsnI GGCC 2 cut(s) 690, 1278
BsoBI CYCGRG 1 cut(s) 997
Bsp119I TTCGAA 1 cut(s) 111
Bsp1286I GDGCHC 2 cut(s) 243, 468
Bsp143I GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
Bsp19I CCATGG 1 cut(s) 1176
BspACI CCGC 7 cut(s) 128, 155, 225, 395, 559, 903, 1218
BspANI GGCC 2 cut(s) 690, 1278
BspCNI CTCAG 5 cut(s) 579, 1330, 1441, 1545, 1552
BspFNI CGCG 2 cut(s) 49, 905
BspHI TCATGA 2 cut(s) 1548, 1591
BspLI GGNNCC 6 cut(s) 78, 273, 381, 492, 1014, 1416
BspPI GGATC 6 cut(s) 71, 84, 363, 472, 1409, 1422
BspQI GCTCTTC 3 cut(s) 231, 456, 1401
BspT104I TTCGAA 1 cut(s) 111
BspT107I GGYRCC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 691
BsrFI RCCGGY 1 cut(s) 221
BsrI ACTGG 2 cut(s) 676, 1087
BssAI RCCGGY 1 cut(s) 221
BssECI CCNNGG 5 cut(s) 6, 575, 588, 659, 1176
BssMI GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
BssNAI GTATAC 1 cut(s) 1021
BssNI GRCGYC 2 cut(s) 318, 654
BssT1I CCWWGG 2 cut(s) 659, 1176
Bst1107I GTATAC 1 cut(s) 1021
Bst2UI CCWGG 2 cut(s) 577, 590
Bst4CI ACNGT 2 cut(s) 7, 737
Bst6I CTCTTC 4 cut(s) 231, 411, 456, 1401
BstACI GRCGYC 2 cut(s) 318, 654
BstBAI YACGTR 1 cut(s) 83
BstBI TTCGAA 1 cut(s) 111
BstC8I GCNNGC 1 cut(s) 223
BstDEI CTNAG 6 cut(s) 566, 954, 1317, 1449, 1532, 1560
BstDSI CCRYGG 2 cut(s) 6, 1176
BstF5I GGATG 3 cut(s) 145, 349, 1468
BstFNI CGCG 2 cut(s) 49, 905
BstHHI GCGC 3 cut(s) 51, 71, 907
BstKTI GATC 9 cut(s) 79, 174, 358, 480, 503, 637, 1381, 1417, 1531
BstMAI GTCTC 7 cut(s) 291, 529, 611, 639, 1044, 1439, 1613
BstMBI GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
BstMCI CGRYCG 1 cut(s) 637
BstMWI GCNNNNNNNGC 4 cut(s) 398, 437, 443, 472
BstNI CCWGG 2 cut(s) 577, 590
BstNSI RCATGY 1 cut(s) 977
BstSCI CCNGG 4 cut(s) 575, 588, 928, 1507
BstSFI CTRYAG 1 cut(s) 1569
BstUI CGCG 2 cut(s) 49, 905
BstV1I GCAGC 3 cut(s) 404, 449, 1144
BstX2I RGATCY 4 cut(s) 76, 355, 477, 1414
BstXI CCANNNNNNTGG 1 cut(s) 596
BstYI RGATCY 4 cut(s) 76, 355, 477, 1414
BstZ17I GTATAC 1 cut(s) 1021
BsuI GTATCC 1 cut(s) 1570
BsuRI GGCC 2 cut(s) 690, 1278
BtgI CCRYGG 2 cut(s) 6, 1176
BtrI CACGTC 1 cut(s) 888
BtsCI GGATG 3 cut(s) 145, 349, 1468
BtsI GCAGTG 2 cut(s) 78, 1279
BtsIMutI CAGTG 2 cut(s) 78, 1279
Cac8I GCNNGC 1 cut(s) 223
CciI TCATGA 2 cut(s) 1548, 1591
CfoI GCGC 3 cut(s) 51, 71, 907
Cfr10I RCCGGY 1 cut(s) 221
Cfr13I GGNCC 2 cut(s) 88, 272
CseI GACGC 6 cut(s) 55, 307, 481, 511, 794, 1040
Csp6I GTAC 2 cut(s) 938, 1285
CviAII CATG 8 cut(s) 742, 911, 974, 1177, 1373, 1549, 1592, 1615
CviQI GTAC 2 cut(s) 938, 1285
DdeI CTNAG 6 cut(s) 566, 954, 1317, 1449, 1532, 1560
DpnI GATC 9 cut(s) 78, 173, 357, 479, 502, 636, 1380, 1416, 1530
DpnII GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
DrdI GACNNNNNNGTC 1 cut(s) 653
DseDI GACNNNNNNGTC 1 cut(s) 653
EaeI YGGCCR 1 cut(s) 1276
Eam1104I CTCTTC 4 cut(s) 231, 411, 456, 1401
EarI CTCTTC 4 cut(s) 231, 411, 456, 1401
EciI GGCGGA 3 cut(s) 143, 170, 1233
Ecl136II GAGCTC 2 cut(s) 241, 466
Eco130I CCWWGG 2 cut(s) 659, 1176
Eco24I GRGCYC 2 cut(s) 243, 468
Eco47I GGWCC 2 cut(s) 88, 272
Eco53kI GAGCTC 2 cut(s) 241, 466
Eco57I CTGAAG 1 cut(s) 732
Eco72I CACGTG 1 cut(s) 83
Eco88I CYCGRG 1 cut(s) 997
EcoICRI GAGCTC 2 cut(s) 241, 466
EcoRII CCWGG 2 cut(s) 575, 588
EcoT14I CCWWGG 2 cut(s) 659, 1176
EcoT38I GRGCYC 2 cut(s) 243, 468
ErhI CCWWGG 2 cut(s) 659, 1176
Esp3I CGTCTC 4 cut(s) 291, 529, 611, 639
FaeI CATG 8 cut(s) 745, 914, 977, 1180, 1376, 1552, 1595, 1618
FalI AAGNNNNNCTT 2 cut(s) 835, 867
FaqI GGGAC 4 cut(s) 285, 641, 912, 1212
FatI CATG 8 cut(s) 741, 910, 973, 1176, 1372, 1548, 1591, 1614
FauNDI CATATG 1 cut(s) 1503
FblI GTMKAC 1 cut(s) 1020
Fnu4HI GCNGC 4 cut(s) 226, 393, 438, 1158
FokI GGATG 3 cut(s) 152, 356, 1475
FriOI GRGCYC 2 cut(s) 243, 468
Fsp4HI GCNGC 4 cut(s) 226, 393, 438, 1158
FspBI CTAG 1 cut(s) 660
GlaI GCGC 3 cut(s) 50, 70, 906
GluI GCNGC 4 cut(s) 226, 393, 438, 1158
HaeIII GGCC 2 cut(s) 690, 1278
HapII CCGG 4 cut(s) 222, 383, 930, 1509
HgaI GACGC 6 cut(s) 55, 307, 481, 511, 794, 1040
HhaI GCGC 3 cut(s) 51, 71, 907
Hin1I GRCGYC 2 cut(s) 318, 654
Hin1II CATG 8 cut(s) 745, 914, 977, 1180, 1376, 1552, 1595, 1618
Hin6I GCGC 3 cut(s) 49, 69, 905
HinP1I GCGC 3 cut(s) 49, 69, 905
HincII GTYRAC 1 cut(s) 758
HindII GTYRAC 1 cut(s) 758
HpaII CCGG 4 cut(s) 222, 383, 930, 1509
HphI GGTGA 3 cut(s) 323, 1145, 1210
Hpy166II GTNNAC 4 cut(s) 88, 733, 758, 1021
Hpy188I TCNGA 9 cut(s) 212, 248, 569, 644, 819, 1108, 1242, 1389, 1561
Hpy188III TCNNGA 8 cut(s) 469, 610, 625, 710, 1211, 1534, 1549, 1592
Hpy8I GTNNAC 4 cut(s) 88, 733, 758, 1021
Hpy99I CGWCG 5 cut(s) 179, 248, 323, 365, 1034
HpyAV CCTTC 8 cut(s) 113, 125, 329, 707, 876, 999, 1195, 1336
HpyCH4III ACNGT 2 cut(s) 7, 737
HpyCH4IV ACGT 4 cut(s) 82, 654, 887, 1405
HpyCH4V TGCA 6 cut(s) 684, 1026, 1074, 1117, 1272, 1501
HpyF10VI GCNNNNNNNGC 4 cut(s) 398, 437, 443, 472
HpyF3I CTNAG 6 cut(s) 566, 954, 1317, 1449, 1532, 1560
HpySE526I ACGT 4 cut(s) 82, 654, 887, 1405
Hsp92I GRCGYC 2 cut(s) 318, 654
Hsp92II CATG 8 cut(s) 745, 914, 977, 1180, 1376, 1552, 1595, 1618
HspAI GCGC 3 cut(s) 49, 69, 905
KroI GCCGGC 1 cut(s) 221
KroNI GCCGGC 1 cut(s) 223
Kzo9I GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
LguI GCTCTTC 3 cut(s) 231, 456, 1401
LmnI GCTCC 4 cut(s) 40, 385, 471, 1012
Lsp1109I GCAGC 3 cut(s) 404, 449, 1144
LweI GCATC 1 cut(s) 85
MaeI CTAG 1 cut(s) 660
MaeII ACGT 4 cut(s) 82, 654, 887, 1405
MaeIII GTNAC 7 cut(s) 10, 311, 737, 898, 976, 1001, 1085
MalI GATC 9 cut(s) 78, 173, 357, 479, 502, 636, 1380, 1416, 1530
MboI GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
MflI RGATCY 4 cut(s) 76, 355, 477, 1414
MhlI GDGCHC 2 cut(s) 243, 468
MluCI AATT 4 cut(s) 191, 797, 1595, 1603
MlyI GAGTC 6 cut(s) 156, 290, 494, 952, 1158, 1234
MmeI TCCRAC 3 cut(s) 190, 226, 842
MroNI GCCGGC 1 cut(s) 221
MroXI GAANNNNTTC 1 cut(s) 1143
MseI TTAA 1 cut(s) 630
MslI CAYNNNNRTG 2 cut(s) 1181, 1196
MspA1I CMGCKG 1 cut(s) 395
MspI CCGG 4 cut(s) 222, 383, 930, 1509
MspR9I CCNGG 4 cut(s) 577, 590, 930, 1509
Mva1269I GAATGC 1 cut(s) 1274
MvaI CCWGG 2 cut(s) 577, 590
MvnI CGCG 2 cut(s) 49, 905
MwoI GCNNNNNNNGC 4 cut(s) 398, 437, 443, 472
NaeI GCCGGC 1 cut(s) 223
NciI CCSGG 2 cut(s) 930, 1509
NcoI CCATGG 1 cut(s) 1176
NdeI CATATG 1 cut(s) 1503
NdeII GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
NgoMIV GCCGGC 1 cut(s) 221
NlaIII CATG 8 cut(s) 745, 914, 977, 1180, 1376, 1552, 1595, 1618
NlaIV GGNNCC 6 cut(s) 78, 273, 381, 492, 1014, 1416
NmuCI GTSAC 2 cut(s) 311, 898
NspI RCATGY 1 cut(s) 977
NspV TTCGAA 1 cut(s) 111
PagI TCATGA 2 cut(s) 1548, 1591
PciI ACATGT 1 cut(s) 973
PciSI GCTCTTC 3 cut(s) 231, 456, 1401
PcsI WCGNNNNNNNCGW 2 cut(s) 183, 369
PctI GAATGC 1 cut(s) 1274
PdiI GCCGGC 1 cut(s) 223
PdmI GAANNNNTTC 1 cut(s) 1143
PfeI GAWTC 4 cut(s) 202, 621, 1103, 1478
PflFI GACNNNGTC 2 cut(s) 179, 317
PflMI CCANNNNNTGG 1 cut(s) 534
PfoI TCCNGGA 1 cut(s) 928
PkrI GCNGC 4 cut(s) 227, 394, 439, 1159
Ple19I CGATCG 1 cut(s) 637
PleI GAGTC 6 cut(s) 155, 289, 493, 952, 1157, 1233
PmaCI CACGTG 1 cut(s) 83
PmlI CACGTG 1 cut(s) 83
PpsI GAGTC 6 cut(s) 155, 289, 493, 952, 1157, 1233
Ppu21I YACGTR 1 cut(s) 83
PscI ACATGT 1 cut(s) 973
Psp124BI GAGCTC 2 cut(s) 243, 468
Psp6I CCWGG 2 cut(s) 575, 588
PspCI CACGTG 1 cut(s) 83
PspGI CCWGG 2 cut(s) 575, 588
PspN4I GGNNCC 6 cut(s) 78, 273, 381, 492, 1014, 1416
PspPI GGNCC 2 cut(s) 88, 272
PsuI RGATCY 4 cut(s) 76, 355, 477, 1414
PsyI GACNNNGTC 2 cut(s) 179, 317
PvuI CGATCG 1 cut(s) 637
RsaI GTAC 2 cut(s) 939, 1286
RsaNI GTAC 2 cut(s) 938, 1285
RseI CAYNNNNRTG 2 cut(s) 1181, 1196
SacI GAGCTC 2 cut(s) 243, 468
SapI GCTCTTC 3 cut(s) 231, 456, 1401
SaqAI TTAA 1 cut(s) 630
SatI GCNGC 4 cut(s) 226, 393, 438, 1158
Sau3AI GATC 9 cut(s) 76, 171, 355, 477, 500, 634, 1378, 1414, 1528
Sau96I GGNCC 2 cut(s) 88, 272
SchI GAGTC 6 cut(s) 156, 290, 494, 952, 1158, 1234
ScrFI CCNGG 4 cut(s) 577, 590, 930, 1509
SduI GDGCHC 2 cut(s) 243, 468
SfaNI GCATC 1 cut(s) 85
SfcI CTRYAG 1 cut(s) 1569
SfuI TTCGAA 1 cut(s) 111
SinI GGWCC 2 cut(s) 88, 272
SmiMI CAYNNNNRTG 2 cut(s) 1181, 1196
SmlI CTYRAG 4 cut(s) 53, 432, 482, 608
SmoI CTYRAG 4 cut(s) 53, 432, 482, 608
Sse9I AATT 4 cut(s) 191, 797, 1595, 1603
SsiI CCGC 7 cut(s) 128, 155, 225, 395, 559, 903, 1218
SspMI CTAG 1 cut(s) 660
SstI GAGCTC 2 cut(s) 243, 468
StyD4I CCNGG 4 cut(s) 575, 588, 928, 1507
StyI CCWWGG 2 cut(s) 659, 1176
TaaI ACNGT 2 cut(s) 7, 737
TaiI ACGT 4 cut(s) 85, 657, 890, 1408
TaqI TCGA 7 cut(s) 33, 111, 174, 321, 961, 1147, 1484
TasI AATT 4 cut(s) 191, 797, 1595, 1603
TatI WGTACW 2 cut(s) 937, 1284
TauI GCSGC 1 cut(s) 228
TfiI GAWTC 4 cut(s) 202, 621, 1103, 1478
Tru1I TTAA 1 cut(s) 630
Tru9I TTAA 1 cut(s) 630
TscAI CASTG 2 cut(s) 78, 1279
TseFI GTSAC 2 cut(s) 311, 898
TseI GCWGC 3 cut(s) 392, 437, 1157
Tsp45I GTSAC 2 cut(s) 311, 898
TspDTI ATGAA 8 cut(s) 39, 132, 927, 1028, 1241, 1482, 1537, 1608
TspRI CASTG 2 cut(s) 78, 1279
Tth111I GACNNNGTC 2 cut(s) 179, 317
Van91I CCANNNNNTGG 1 cut(s) 534
VpaK11BI GGWCC 2 cut(s) 88, 272
XapI RAATTY 1 cut(s) 1595
XceI RCATGY 1 cut(s) 977
XcmI CCANNNNNNNNNTGG 1 cut(s) 683
XmaJI CCTAGG 1 cut(s) 659
XmiI GTMKAC 1 cut(s) 1020
XmnI GAANNNNTTC 1 cut(s) 1143
XspI CTAG 1 cut(s) 660
ZraI GACGTC 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.