RchiOBHm_Chr1g0345861

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000167
Physical Location & Seq
Forward (+)
38056539 .. 38058242
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1080 bp
ATGTCTAACGAGCAAGAACACCCCAGGAAGGCATTTGGATGGGCTGCAAGAGATTCATCTGGTGTTCTCTCTCCCTTCAGTTTCTCCAGAAGGGAATCCGGAGAGAAAGACGTGACATTCAAAGTGTTGTATTGTGGGATTTGCCATTCGGACCTTCACATGGTCAAGAATGAATGGGGCTTCTCTACCTATCCTCTGGTTCCCGGGCATGAGATTGTCGGTGAAGTAACGGAAGTAGGGAGCAATGTACAAAAATTCAAAGTTGGAGACAAAGTCGGTGTTGGATGCATAGTTGGAGCTTGCCGATCTTGTGATAGTTGTACCGACCATCTTGAGAACTACTGCCCCAAACAAATACTCACGTACAGTGCCAAGTACTATGACGGAACCACCACCTATGGCGGTTACTCTGACATTATGGTTGCAGATGAACACTTCGTACTCCGTATCCCGGACAACCTACCCCTTGATTGTGCTGCTCCTCTCCTATGTGCCGGAATCACAACCTACAGCCCGTTGAGATATTTTGGACTTGACAAGCCCGGTATGCATGTGGGTGTGGTTGGCCTAGGTGGTTTAGGCCACGTCGCAGTGAAGTTTGCCAAGGCAATGGGAGTGAAGGTTACAGTGATCAGTACGTCCCCTAATAAGAAGGAGGAAGCAGTTAAACACCTAGGAGCTGATTCGTTTTTGGTTAGTCGTGACCAAGATCAAATGCAGGCTGCCATTGGTACCATGGATGGGATCATTGACACAGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGGTCTGTTGAAGTCTCATGGAAAGCTTGTCATGGTTGGTGCACCAGAAAAGCCTCTTGAGCTTCCAGTTTTTCCTTTACTCATGGGAAGGAAGATGGTAGCTGGTAGCGGCATTGGAGGTATGAAGGAGACACAAGAGATGATCAATTTTGCAGCCAAGCACAACATAACAGCAGACATCGAGGTCATCCCAATTGACTACTTGAACACTGCCATGGAGCGCCTTGCCAAAGCAGACGTCAGATACCGTTTTGTCATTGACATTGGAAACACACTGAAGGCTAGATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

359

Amino Acids

38.96

Weight (kDa)

6.63

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 34 - 152 2.1e-27 Alcohol dehydrogenase GroES-like domain
2-Hacid_dh_C PF02826 174 - 224 9.7e-06 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AlaDh_PNT_C PF01262 184 - 254 3.7e-06 Alanine dehydrogenase/PNT, C-terminal domain
ADH_zinc_N PF00107 192 - 315 1.6e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 971
AatII GACGTC 1 cut(s) 1029
Acc65I GGTACC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 731
AccIII TCCGGA 1 cut(s) 98
AciI CCGC 2 cut(s) 402, 897
AclWI GGATC 1 cut(s) 752
AcsI RAATTY 1 cut(s) 254
AcuI CTGAAG 1 cut(s) 61
AcyI GRCGYC 1 cut(s) 1026
AfaI GTAC 7 cut(s) 249, 322, 365, 377, 441, 637, 733
AfiI CCNNNNNNNGG 5 cut(s) 28, 160, 451, 741, 788
AgsI TTSAA 4 cut(s) 121, 259, 799, 994
AjiI CACGTC 2 cut(s) 112, 586
AjnI CCWGG 1 cut(s) 23
AluBI AGCT 5 cut(s) 299, 680, 814, 850, 890
AluI AGCT 5 cut(s) 299, 680, 814, 850, 890
Alw21I GWGCWC 1 cut(s) 832
Alw26I GTCTC 3 cut(s) 261, 807, 911
Alw44I GTGCAC 1 cut(s) 828
AlwI GGATC 1 cut(s) 752
AlwNI CAGNNNCTG 1 cut(s) 761
Ama87I CYCGRG 1 cut(s) 203
Aor13HI TCCGGA 1 cut(s) 98
AoxI GGCC 2 cut(s) 565, 580
ApaLI GTGCAC 1 cut(s) 828
ApeKI GCWGC 4 cut(s) 44, 476, 722, 941
ApoI RAATTY 1 cut(s) 254
ArsI GACNNNNNNTTYG 2 cut(s) 1011, 1043
Asp718I GGTACC 1 cut(s) 731
AspA2I CCTAGG 2 cut(s) 568, 673
AspLEI GCGC 1 cut(s) 1011
AspS9I GGNCC 1 cut(s) 151
AsuC2I CCSGG 4 cut(s) 204, 205, 452, 543
AsuHPI GGTGA 1 cut(s) 233
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 1 cut(s) 151
AvrII CCTAGG 2 cut(s) 568, 673
BaeGI GKGCMC 1 cut(s) 832
BanI GGYRCC 1 cut(s) 731
Bbv12I GWGCWC 1 cut(s) 832
BbvI GCAGC 4 cut(s) 31, 463, 709, 953
BccI CCATC 4 cut(s) 33, 336, 734, 877
BciT130I CCWGG 1 cut(s) 25
BciVI GTATCC 1 cut(s) 458
BclI TGATCA 2 cut(s) 630, 930
BcnI CCSGG 4 cut(s) 204, 205, 452, 543
BcoDI GTCTC 3 cut(s) 261, 807, 911
BfaI CTAG 3 cut(s) 569, 674, 1071
BfmI CTRYAG 1 cut(s) 508
BfoI RGCGCY 1 cut(s) 1012
BfuI GTATCC 1 cut(s) 458
BglII AGATCT 1 cut(s) 1073
BisI GCNGC 5 cut(s) 45, 477, 723, 898, 942
BlnI CCTAGG 2 cut(s) 568, 673
BlsI GCNGC 5 cut(s) 46, 478, 724, 899, 943
BmcAI AGTACT 1 cut(s) 377
Bme1390I CCNGG 5 cut(s) 25, 204, 205, 452, 543
Bme18I GGWCC 1 cut(s) 151
BmeT110I CYCGRG 1 cut(s) 203
BmgBI CACGTC 2 cut(s) 112, 586
BmgT120I GGNCC 1 cut(s) 151
BmiI GGNNCC 3 cut(s) 201, 388, 733
BmrFI CCNGG 5 cut(s) 25, 204, 205, 452, 543
BmsI GCATC 1 cut(s) 275
BpmI CTGGAG 1 cut(s) 70
BpuEI CTTGAG 2 cut(s) 353, 866
BpuMI CCSGG 4 cut(s) 204, 205, 452, 543
BsaAI YACGTR 1 cut(s) 363
BsaHI GRCGYC 1 cut(s) 1026
BsaJI CCNNGG 7 cut(s) 23, 203, 568, 603, 673, 735, 1002
BsaWI WCCGGW 1 cut(s) 98
BsaXI ACNNNNNCTCC 4 cut(s) 258, 288, 606, 636
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 160, 451, 741, 788
Bse1I ACTGG 1 cut(s) 854
Bse3DI GCAATG 2 cut(s) 250, 615
BseAI TCCGGA 1 cut(s) 98
BseBI CCWGG 1 cut(s) 25
BseDI CCNNGG 7 cut(s) 23, 203, 568, 603, 673, 735, 1002
BseGI GGATG 5 cut(s) 44, 290, 745, 769, 975
BseLI CCNNNNNNNGG 5 cut(s) 28, 160, 451, 741, 788
BseMI GCAATG 2 cut(s) 250, 615
BseNI ACTGG 1 cut(s) 854
BseRI GAGGAG 1 cut(s) 471
BseSI GKGCMC 1 cut(s) 832
BseXI GCAGC 4 cut(s) 31, 463, 709, 953
BsgI GTGCAG 1 cut(s) 747
BshFI GGCC 2 cut(s) 567, 582
BshNI GGYRCC 1 cut(s) 731
BsiHKAI GWGCWC 1 cut(s) 832
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 5 cut(s) 99, 204, 452, 495, 543
BslFI GGGAC 1 cut(s) 625
BslI CCNNNNNNNGG 5 cut(s) 28, 160, 451, 741, 788
BsmAI GTCTC 3 cut(s) 261, 807, 911
BsmFI GGGAC 1 cut(s) 625
BsnI GGCC 2 cut(s) 567, 582
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 832
Bsp13I TCCGGA 1 cut(s) 98
Bsp1407I TGTACA 1 cut(s) 247
Bsp143I GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
Bsp19I CCATGG 2 cut(s) 735, 1002
BspACI CCGC 2 cut(s) 402, 897
BspANI GGCC 2 cut(s) 567, 582
BspEI TCCGGA 1 cut(s) 98
BspLI GGNNCC 3 cut(s) 201, 388, 733
BspPI GGATC 1 cut(s) 752
BspT107I GGYRCC 1 cut(s) 731
BsrDI GCAATG 2 cut(s) 250, 615
BsrGI TGTACA 1 cut(s) 247
BsrI ACTGG 1 cut(s) 854
BssECI CCNNGG 7 cut(s) 23, 203, 568, 603, 673, 735, 1002
BssMI GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
BssNI GRCGYC 1 cut(s) 1026
BssT1I CCWWGG 5 cut(s) 568, 603, 673, 735, 1002
Bst2UI CCWGG 1 cut(s) 25
Bst4CI ACNGT 4 cut(s) 368, 628, 757, 1037
BstACI GRCGYC 1 cut(s) 1026
BstAUI TGTACA 1 cut(s) 247
BstBAI YACGTR 1 cut(s) 363
BstC8I GCNNGC 2 cut(s) 301, 720
BstDSI CCRYGG 2 cut(s) 735, 1002
BstF5I GGATG 5 cut(s) 44, 290, 745, 769, 975
BstH2I RGCGCY 1 cut(s) 1012
BstHHI GCGC 1 cut(s) 1011
BstKTI GATC 6 cut(s) 308, 633, 712, 747, 933, 1076
BstMAI GTCTC 3 cut(s) 261, 807, 911
BstMBI GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
BstMWI GCNNNNNNNGC 2 cut(s) 547, 847
BstNI CCWGG 1 cut(s) 25
BstNSI RCATGY 1 cut(s) 554
BstSCI CCNGG 5 cut(s) 23, 202, 203, 450, 541
BstSFI CTRYAG 1 cut(s) 508
BstSLI GKGCMC 1 cut(s) 832
BstV1I GCAGC 4 cut(s) 31, 463, 709, 953
BstX2I RGATCY 1 cut(s) 1073
BstXI CCANNNNNNTGG 1 cut(s) 610
BstYI RGATCY 1 cut(s) 1073
BsuI GTATCC 1 cut(s) 458
BsuRI GGCC 2 cut(s) 567, 582
BtgI CCRYGG 2 cut(s) 735, 1002
BtrI CACGTC 2 cut(s) 112, 586
BtsCI GGATG 5 cut(s) 44, 290, 745, 769, 975
BtsI GCAGTG 2 cut(s) 597, 996
BtsIMutI CAGTG 5 cut(s) 373, 597, 633, 996, 1061
Cac8I GCNNGC 2 cut(s) 301, 720
CaiI CAGNNNCTG 1 cut(s) 761
CfoI GCGC 1 cut(s) 1011
Cfr13I GGNCC 1 cut(s) 151
Cfr9I CCCGGG 1 cut(s) 203
Csp6I GTAC 7 cut(s) 248, 321, 364, 376, 440, 636, 732
CviAII CATG 8 cut(s) 160, 209, 551, 736, 806, 820, 871, 1003
CviQI GTAC 7 cut(s) 248, 321, 364, 376, 440, 636, 732
DpnI GATC 6 cut(s) 307, 632, 711, 746, 932, 1075
DpnII GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
DrdI GACNNNNNNGTC 1 cut(s) 971
DseDI GACNNNNNNGTC 1 cut(s) 971
Eco130I CCWWGG 5 cut(s) 568, 603, 673, 735, 1002
Eco47I GGWCC 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 61
Eco88I CYCGRG 1 cut(s) 203
EcoRII CCWGG 1 cut(s) 23
EcoT14I CCWWGG 5 cut(s) 568, 603, 673, 735, 1002
EcoT22I ATGCAT 2 cut(s) 290, 552
ErhI CCWWGG 5 cut(s) 568, 603, 673, 735, 1002
FaeI CATG 8 cut(s) 163, 212, 554, 739, 809, 823, 874, 1006
FaqI GGGAC 1 cut(s) 625
FatI CATG 8 cut(s) 159, 208, 550, 735, 805, 819, 870, 1002
FbaI TGATCA 2 cut(s) 630, 930
Fnu4HI GCNGC 5 cut(s) 45, 477, 723, 898, 942
FokI GGATG 5 cut(s) 51, 297, 752, 756, 962
Fsp4HI GCNGC 5 cut(s) 45, 477, 723, 898, 942
FspBI CTAG 3 cut(s) 569, 674, 1071
GlaI GCGC 1 cut(s) 1010
GluI GCNGC 5 cut(s) 45, 477, 723, 898, 942
GsuI CTGGAG 1 cut(s) 70
HaeII RGCGCY 1 cut(s) 1012
HaeIII GGCC 2 cut(s) 567, 582
HapII CCGG 5 cut(s) 99, 204, 452, 495, 543
HhaI GCGC 1 cut(s) 1011
Hin1I GRCGYC 1 cut(s) 1026
Hin1II CATG 8 cut(s) 163, 212, 554, 739, 809, 823, 874, 1006
Hin6I GCGC 1 cut(s) 1009
HinP1I GCGC 1 cut(s) 1009
HindIII AAGCTT 1 cut(s) 812
HinfI GANTC 4 cut(s) 53, 95, 498, 683
HpaII CCGG 5 cut(s) 99, 204, 452, 495, 543
HphI GGTGA 1 cut(s) 233
Hpy166II GTNNAC 1 cut(s) 830
Hpy188I TCNGA 3 cut(s) 151, 412, 1031
Hpy188III TCNNGA 6 cut(s) 87, 99, 166, 332, 701, 845
Hpy8I GTNNAC 1 cut(s) 830
Hpy99I CGWCG 1 cut(s) 590
HpyAV CCTTC 9 cut(s) 22, 84, 85, 164, 613, 646, 870, 907, 1060
HpyCH4III ACNGT 4 cut(s) 368, 628, 757, 1037
HpyCH4IV ACGT 5 cut(s) 111, 362, 585, 638, 1026
HpyCH4V TGCA 8 cut(s) 47, 288, 425, 550, 718, 764, 830, 941
HpyF10VI GCNNNNNNNGC 2 cut(s) 547, 847
HpySE526I ACGT 5 cut(s) 111, 362, 585, 638, 1026
Hsp92I GRCGYC 1 cut(s) 1026
Hsp92II CATG 8 cut(s) 163, 212, 554, 739, 809, 823, 874, 1006
HspAI GCGC 1 cut(s) 1009
Kpn2I TCCGGA 1 cut(s) 98
KpnI GGTACC 1 cut(s) 735
Ksp22I TGATCA 2 cut(s) 630, 930
Kzo9I GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
LmnI GCTCC 5 cut(s) 240, 296, 484, 677, 1006
Lsp1109I GCAGC 4 cut(s) 31, 463, 709, 953
LweI GCATC 1 cut(s) 275
MaeI CTAG 3 cut(s) 569, 674, 1071
MaeII ACGT 5 cut(s) 111, 362, 585, 638, 1026
MaeIII GTNAC 5 cut(s) 112, 226, 404, 622, 701
MalI GATC 6 cut(s) 307, 632, 711, 746, 932, 1075
MboI GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
MboII GAAGA 1 cut(s) 892
MfeI CAATTG 1 cut(s) 981
MflI RGATCY 1 cut(s) 1073
MhlI GDGCHC 1 cut(s) 832
MluCI AATT 3 cut(s) 254, 934, 981
MmeI TCCRAC 3 cut(s) 244, 262, 274
MnlI CCTC 7 cut(s) 204, 492, 649, 783, 852, 899, 964
Mph1103I ATGCAT 2 cut(s) 290, 552
MroI TCCGGA 1 cut(s) 98
MseI TTAA 2 cut(s) 666, 1078
MslI CAYNNNNRTG 3 cut(s) 37, 555, 1001
MspI CCGG 5 cut(s) 99, 204, 452, 495, 543
MspR9I CCNGG 5 cut(s) 25, 204, 205, 452, 543
MunI CAATTG 1 cut(s) 981
MvaI CCWGG 1 cut(s) 25
MwoI GCNNNNNNNGC 2 cut(s) 547, 847
NciI CCSGG 4 cut(s) 204, 205, 452, 543
NcoI CCATGG 2 cut(s) 735, 1002
NdeII GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
NlaIII CATG 8 cut(s) 163, 212, 554, 739, 809, 823, 874, 1006
NlaIV GGNNCC 3 cut(s) 201, 388, 733
NmuCI GTSAC 2 cut(s) 112, 701
NsiI ATGCAT 2 cut(s) 290, 552
NspI RCATGY 1 cut(s) 554
PfeI GAWTC 4 cut(s) 53, 95, 498, 683
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 450
PkrI GCNGC 5 cut(s) 46, 478, 724, 899, 943
Ppu21I YACGTR 1 cut(s) 363
Psp6I CCWGG 1 cut(s) 23
PspGI CCWGG 1 cut(s) 23
PspN4I GGNNCC 3 cut(s) 201, 388, 733
PspPI GGNCC 1 cut(s) 151
PsrI GAACNNNNNNTAC 2 cut(s) 423, 455
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 1 cut(s) 1073
PsyI GACNNNGTC 1 cut(s) 272
RsaI GTAC 7 cut(s) 249, 322, 365, 377, 441, 637, 733
RsaNI GTAC 7 cut(s) 248, 321, 364, 376, 440, 636, 732
RseI CAYNNNNRTG 3 cut(s) 37, 555, 1001
SaqAI TTAA 2 cut(s) 666, 1078
SatI GCNGC 5 cut(s) 45, 477, 723, 898, 942
Sau3AI GATC 6 cut(s) 305, 630, 709, 744, 930, 1073
Sau96I GGNCC 1 cut(s) 151
ScaI AGTACT 1 cut(s) 377
ScrFI CCNGG 5 cut(s) 25, 204, 205, 452, 543
SduI GDGCHC 1 cut(s) 832
SfaNI GCATC 1 cut(s) 275
SfcI CTRYAG 1 cut(s) 508
SinI GGWCC 1 cut(s) 151
SmaI CCCGGG 1 cut(s) 205
SmiMI CAYNNNNRTG 3 cut(s) 37, 555, 1001
SmlI CTYRAG 2 cut(s) 332, 845
SmoI CTYRAG 2 cut(s) 332, 845
Sse9I AATT 3 cut(s) 254, 934, 981
SsiI CCGC 2 cut(s) 402, 897
SspMI CTAG 3 cut(s) 569, 674, 1071
StyD4I CCNGG 5 cut(s) 23, 202, 203, 450, 541
StyI CCWWGG 5 cut(s) 568, 603, 673, 735, 1002
TaaI ACNGT 4 cut(s) 368, 628, 757, 1037
TaiI ACGT 5 cut(s) 114, 365, 588, 641, 1029
TaqI TCGA 1 cut(s) 969
TasI AATT 3 cut(s) 254, 934, 981
TatI WGTACW 2 cut(s) 247, 375
TauI GCSGC 1 cut(s) 900
TfiI GAWTC 4 cut(s) 53, 95, 498, 683
Tru1I TTAA 2 cut(s) 666, 1078
Tru9I TTAA 2 cut(s) 666, 1078
TscAI CASTG 5 cut(s) 373, 597, 633, 1003, 1068
TseFI GTSAC 2 cut(s) 112, 701
TseI GCWGC 4 cut(s) 44, 476, 722, 941
Tsp45I GTSAC 2 cut(s) 112, 701
TspDTI ATGAA 4 cut(s) 45, 186, 444, 926
TspGWI ACGGA 3 cut(s) 245, 399, 434
TspMI CCCGGG 1 cut(s) 203
TspRI CASTG 5 cut(s) 373, 597, 633, 1003, 1068
Tth111I GACNNNGTC 1 cut(s) 272
VneI GTGCAC 1 cut(s) 828
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 1 cut(s) 254
XceI RCATGY 1 cut(s) 554
XcmI CCANNNNNNNNNTGG 1 cut(s) 733
XmaI CCCGGG 1 cut(s) 203
XmaJI CCTAGG 2 cut(s) 568, 673
XspI CTAG 3 cut(s) 569, 674, 1071
ZraI GACGTC 1 cut(s) 1027
ZrmI AGTACT 1 cut(s) 377
Zsp2I ATGCAT 2 cut(s) 290, 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.