DNA (cytosine-5)-methyltransferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 170 |
| AciI | CCGC | 3 cut(s) | 228, 298, 466 |
| AclWI | GGATC | 1 cut(s) | 548 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcvI | CACGTG | 1 cut(s) | 34 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 170, 453 |
| AflIII | ACRYGT | 3 cut(s) | 31, 33, 269 |
| AgsI | TTSAA | 1 cut(s) | 19 |
| AluBI | AGCT | 2 cut(s) | 188, 493 |
| AluI | AGCT | 2 cut(s) | 188, 493 |
| Alw21I | GWGCWC | 1 cut(s) | 290 |
| Alw26I | GTCTC | 1 cut(s) | 410 |
| AlwI | GGATC | 1 cut(s) | 548 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 402 |
| AoxI | GGCC | 2 cut(s) | 3, 467 |
| ApeKI | GCWGC | 3 cut(s) | 224, 350, 353 |
| AspS9I | GGNCC | 1 cut(s) | 233 |
| AsuII | TTCGAA | 1 cut(s) | 335 |
| AvaII | GGWCC | 1 cut(s) | 233 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbrPI | CACGTG | 1 cut(s) | 34 |
| Bbv12I | GWGCWC | 1 cut(s) | 290 |
| BbvI | GCAGC | 3 cut(s) | 236, 337, 340 |
| BccI | CCATC | 1 cut(s) | 14 |
| BciVI | GTATCC | 1 cut(s) | 57 |
| BcoDI | GTCTC | 1 cut(s) | 410 |
| BfuI | GTATCC | 1 cut(s) | 57 |
| BisI | GCNGC | 5 cut(s) | 225, 228, 351, 354, 467 |
| BlsI | GCNGC | 5 cut(s) | 226, 229, 352, 355, 468 |
| Bme18I | GGWCC | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 1 cut(s) | 233 |
| BmsI | GCATC | 4 cut(s) | 14, 127, 133, 427 |
| BpmI | CTGGAG | 1 cut(s) | 168 |
| Bpu14I | TTCGAA | 1 cut(s) | 335 |
| BsaAI | YACGTR | 2 cut(s) | 34, 272 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 170, 453 |
| Bse3DI | GCAATG | 1 cut(s) | 83 |
| BseGI | GGATG | 1 cut(s) | 484 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 170, 453 |
| BseMI | GCAATG | 1 cut(s) | 83 |
| BseMII | CTCAG | 3 cut(s) | 42, 312, 525 |
| BseXI | GCAGC | 3 cut(s) | 236, 337, 340 |
| BshFI | GGCC | 2 cut(s) | 5, 469 |
| BsiHKAI | GWGCWC | 1 cut(s) | 290 |
| BslFI | GGGAC | 2 cut(s) | 123, 193 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 170, 453 |
| BsmAI | GTCTC | 1 cut(s) | 410 |
| BsmFI | GGGAC | 2 cut(s) | 123, 193 |
| BsnI | GGCC | 2 cut(s) | 5, 469 |
| Bsp119I | TTCGAA | 1 cut(s) | 335 |
| Bsp1286I | GDGCHC | 1 cut(s) | 290 |
| Bsp143I | GATC | 4 cut(s) | 123, 190, 481, 540 |
| BspACI | CCGC | 3 cut(s) | 228, 298, 466 |
| BspANI | GGCC | 2 cut(s) | 5, 469 |
| BspCNI | CTCAG | 3 cut(s) | 43, 313, 526 |
| BspHI | TCATGA | 1 cut(s) | 543 |
| BspPI | GGATC | 1 cut(s) | 548 |
| BspT104I | TTCGAA | 1 cut(s) | 335 |
| BsrDI | GCAATG | 1 cut(s) | 83 |
| BssMI | GATC | 4 cut(s) | 123, 190, 481, 540 |
| Bst6I | CTCTTC | 2 cut(s) | 14, 50 |
| BstBAI | YACGTR | 2 cut(s) | 34, 272 |
| BstBI | TTCGAA | 1 cut(s) | 335 |
| BstDEI | CTNAG | 3 cut(s) | 51, 321, 534 |
| BstF5I | GGATG | 1 cut(s) | 484 |
| BstKTI | GATC | 4 cut(s) | 126, 193, 484, 543 |
| BstMAI | GTCTC | 1 cut(s) | 410 |
| BstMBI | GATC | 4 cut(s) | 123, 190, 481, 540 |
| BstV1I | GCAGC | 3 cut(s) | 236, 337, 340 |
| BsuI | GTATCC | 1 cut(s) | 57 |
| BsuRI | GGCC | 2 cut(s) | 5, 469 |
| BtsCI | GGATG | 1 cut(s) | 484 |
| CaiI | CAGNNNCTG | 1 cut(s) | 402 |
| CciI | TCATGA | 1 cut(s) | 543 |
| Cfr13I | GGNCC | 1 cut(s) | 233 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviAII | CATG | 4 cut(s) | 113, 313, 448, 544 |
| CviJI | RGCY | 8 cut(s) | 5, 188, 227, 319, 369, 469, 493, 551 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 188, 227, 319, 369, 469, 493, 551 |
| CviQI | GTAC | 1 cut(s) | 29 |
| DdeI | CTNAG | 3 cut(s) | 51, 321, 534 |
| DpnI | GATC | 4 cut(s) | 125, 192, 483, 542 |
| DpnII | GATC | 4 cut(s) | 123, 190, 481, 540 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 14, 50 |
| EarI | CTCTTC | 2 cut(s) | 14, 50 |
| Eco47I | GGWCC | 1 cut(s) | 233 |
| Eco72I | CACGTG | 1 cut(s) | 34 |
| EcoO109I | RGGNCCY | 1 cut(s) | 233 |
| EcoT22I | ATGCAT | 1 cut(s) | 442 |
| FaeI | CATG | 4 cut(s) | 116, 316, 451, 547 |
| FaqI | GGGAC | 2 cut(s) | 123, 193 |
| FatI | CATG | 4 cut(s) | 112, 312, 447, 543 |
| FauI | CCCGC | 1 cut(s) | 305 |
| Fnu4HI | GCNGC | 5 cut(s) | 225, 228, 351, 354, 467 |
| FokI | GGATG | 1 cut(s) | 491 |
| Fsp4HI | GCNGC | 5 cut(s) | 225, 228, 351, 354, 467 |
| GluI | GCNGC | 5 cut(s) | 225, 228, 351, 354, 467 |
| GsuI | CTGGAG | 1 cut(s) | 168 |
| HaeIII | GGCC | 2 cut(s) | 5, 469 |
| Hin1II | CATG | 4 cut(s) | 116, 316, 451, 547 |
| HinfI | GANTC | 4 cut(s) | 77, 181, 332, 399 |
| Hpy166II | GTNNAC | 2 cut(s) | 31, 376 |
| Hpy188I | TCNGA | 1 cut(s) | 486 |
| Hpy188III | TCNNGA | 2 cut(s) | 50, 544 |
| Hpy8I | GTNNAC | 2 cut(s) | 31, 376 |
| HpyAV | CCTTC | 2 cut(s) | 425, 541 |
| HpyCH4IV | ACGT | 2 cut(s) | 33, 271 |
| HpyCH4V | TGCA | 4 cut(s) | 146, 356, 440, 524 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 321, 534 |
| HpySE526I | ACGT | 2 cut(s) | 33, 271 |
| Hsp92II | CATG | 4 cut(s) | 116, 316, 451, 547 |
| Kzo9I | GATC | 4 cut(s) | 123, 190, 481, 540 |
| LmnI | GCTCC | 1 cut(s) | 285 |
| LpnPI | CCDG | 5 cut(s) | 63, 134, 198, 216, 333 |
| Lsp1109I | GCAGC | 3 cut(s) | 236, 337, 340 |
| LweI | GCATC | 4 cut(s) | 14, 127, 133, 427 |
| MaeII | ACGT | 2 cut(s) | 33, 271 |
| MalI | GATC | 4 cut(s) | 125, 192, 483, 542 |
| MboI | GATC | 4 cut(s) | 123, 190, 481, 540 |
| MboII | GAAGA | 6 cut(s) | 31, 67, 72, 146, 206, 374 |
| MhlI | GDGCHC | 1 cut(s) | 290 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 3 cut(s) | 147, 496, 528 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 175 |
| MnlI | CCTC | 4 cut(s) | 57, 246, 450, 531 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 442 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 555 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| NdeII | GATC | 4 cut(s) | 123, 190, 481, 540 |
| NlaIII | CATG | 4 cut(s) | 116, 316, 451, 547 |
| NsiI | ATGCAT | 1 cut(s) | 442 |
| NspV | TTCGAA | 1 cut(s) | 335 |
| PagI | TCATGA | 1 cut(s) | 543 |
| PfeI | GAWTC | 3 cut(s) | 77, 332, 399 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 170 |
| PkrI | GCNGC | 5 cut(s) | 226, 229, 352, 355, 468 |
| PleI | GAGTC | 1 cut(s) | 175 |
| PmaCI | CACGTG | 1 cut(s) | 34 |
| PmlI | CACGTG | 1 cut(s) | 34 |
| PpsI | GAGTC | 1 cut(s) | 175 |
| Ppu21I | YACGTR | 2 cut(s) | 34, 272 |
| PpuMI | RGGWCCY | 1 cut(s) | 233 |
| Psp5II | RGGWCCY | 1 cut(s) | 233 |
| PspCI | CACGTG | 1 cut(s) | 34 |
| PspPI | GGNCC | 1 cut(s) | 233 |
| PspPPI | RGGWCCY | 1 cut(s) | 233 |
| PstNI | CAGNNNCTG | 1 cut(s) | 402 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SaqAI | TTAA | 1 cut(s) | 555 |
| SatI | GCNGC | 5 cut(s) | 225, 228, 351, 354, 467 |
| Sau3AI | GATC | 4 cut(s) | 123, 190, 481, 540 |
| Sau96I | GGNCC | 1 cut(s) | 233 |
| SchI | GAGTC | 1 cut(s) | 175 |
| SduI | GDGCHC | 1 cut(s) | 290 |
| SetI | ASST | 6 cut(s) | 36, 190, 238, 274, 461, 495 |
| SfaNI | GCATC | 4 cut(s) | 14, 127, 133, 427 |
| SfuI | TTCGAA | 1 cut(s) | 335 |
| SinI | GGWCC | 1 cut(s) | 233 |
| Sse9I | AATT | 3 cut(s) | 147, 496, 528 |
| SsiI | CCGC | 3 cut(s) | 228, 298, 466 |
| TaiI | ACGT | 2 cut(s) | 36, 274 |
| TaqI | TCGA | 1 cut(s) | 335 |
| TasI | AATT | 3 cut(s) | 147, 496, 528 |
| TauI | GCSGC | 2 cut(s) | 230, 469 |
| TfiI | GAWTC | 3 cut(s) | 77, 332, 399 |
| Tru1I | TTAA | 1 cut(s) | 555 |
| Tru9I | TTAA | 1 cut(s) | 555 |
| TseI | GCWGC | 3 cut(s) | 224, 350, 353 |
| TspDTI | ATGAA | 4 cut(s) | 72, 140, 329, 560 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 170 |
| VpaK11BI | GGWCC | 1 cut(s) | 233 |
| Zsp2I | ATGCAT | 1 cut(s) | 442 |