DNA (cytosine-5)-methyltransferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 486 |
| AciI | CCGC | 3 cut(s) | 5, 400, 473 |
| AclWI | GGATC | 1 cut(s) | 602 |
| AcsI | RAATTY | 1 cut(s) | 139 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 100, 429 |
| AflII | CTTAAG | 1 cut(s) | 85 |
| AgsI | TTSAA | 5 cut(s) | 68, 184, 391, 576, 604 |
| AjnI | CCWGG | 1 cut(s) | 642 |
| AluBI | AGCT | 5 cut(s) | 55, 251, 538, 542, 615 |
| AluI | AGCT | 5 cut(s) | 55, 251, 538, 542, 615 |
| Alw26I | GTCTC | 1 cut(s) | 579 |
| AlwI | GGATC | 1 cut(s) | 602 |
| AoxI | GGCC | 3 cut(s) | 43, 508, 652 |
| ApoI | RAATTY | 1 cut(s) | 139 |
| AspS9I | GGNCC | 3 cut(s) | 91, 508, 653 |
| AsuHPI | GGTGA | 2 cut(s) | 161, 359 |
| AsuNHI | GCTAGC | 1 cut(s) | 538 |
| AvaII | GGWCC | 1 cut(s) | 91 |
| BanI | GGYRCC | 1 cut(s) | 486 |
| BccI | CCATC | 2 cut(s) | 491, 498 |
| BciT130I | CCWGG | 1 cut(s) | 644 |
| BciVI | GTATCC | 1 cut(s) | 278 |
| BcoDI | GTCTC | 1 cut(s) | 579 |
| BfaI | CTAG | 4 cut(s) | 440, 539, 612, 657 |
| BfrI | CTTAAG | 1 cut(s) | 85 |
| BfuI | GTATCC | 1 cut(s) | 278 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 644 |
| Bme18I | GGWCC | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 3 cut(s) | 91, 508, 653 |
| BmiI | GGNNCC | 2 cut(s) | 92, 488 |
| BmrFI | CCNGG | 1 cut(s) | 644 |
| BmrI | ACTGGG | 1 cut(s) | 633 |
| BmsI | GCATC | 1 cut(s) | 213 |
| BmtI | GCTAGC | 1 cut(s) | 542 |
| BmuI | ACTGGG | 1 cut(s) | 633 |
| BpuEI | CTTGAG | 1 cut(s) | 524 |
| Bsa29I | ATCGAT | 1 cut(s) | 190 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 100, 429 |
| Bse1I | ACTGG | 1 cut(s) | 628 |
| BseBI | CCWGG | 1 cut(s) | 644 |
| BseCI | ATCGAT | 1 cut(s) | 190 |
| BseGI | GGATG | 1 cut(s) | 502 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 100, 429 |
| BseMII | CTCAG | 2 cut(s) | 42, 510 |
| BseNI | ACTGG | 1 cut(s) | 628 |
| BseRI | GAGGAG | 1 cut(s) | 548 |
| BsgI | GTGCAG | 1 cut(s) | 261 |
| BshFI | GGCC | 3 cut(s) | 45, 510, 654 |
| BshNI | GGYRCC | 1 cut(s) | 486 |
| BshVI | ATCGAT | 1 cut(s) | 190 |
| BslFI | GGGAC | 2 cut(s) | 104, 640 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 100, 429 |
| BsmAI | GTCTC | 1 cut(s) | 579 |
| BsmFI | GGGAC | 2 cut(s) | 104, 640 |
| BsmI | GAATGC | 2 cut(s) | 397, 529 |
| BsnI | GGCC | 3 cut(s) | 45, 510, 654 |
| Bsp143I | GATC | 3 cut(s) | 187, 436, 607 |
| BspACI | CCGC | 3 cut(s) | 5, 400, 473 |
| BspANI | GGCC | 3 cut(s) | 45, 510, 654 |
| BspCNI | CTCAG | 2 cut(s) | 43, 511 |
| BspDI | ATCGAT | 1 cut(s) | 190 |
| BspLI | GGNNCC | 2 cut(s) | 92, 488 |
| BspOI | GCTAGC | 1 cut(s) | 542 |
| BspPI | GGATC | 1 cut(s) | 602 |
| BspQI | GCTCTTC | 2 cut(s) | 258, 549 |
| BspT107I | GGYRCC | 1 cut(s) | 486 |
| BspTI | CTTAAG | 1 cut(s) | 85 |
| BsrI | ACTGG | 1 cut(s) | 628 |
| BssMI | GATC | 3 cut(s) | 187, 436, 607 |
| Bst2UI | CCWGG | 1 cut(s) | 644 |
| Bst4CI | ACNGT | 2 cut(s) | 118, 160 |
| Bst6I | CTCTTC | 2 cut(s) | 258, 549 |
| BstAFI | CTTAAG | 1 cut(s) | 85 |
| BstC8I | GCNNGC | 1 cut(s) | 540 |
| BstDEI | CTNAG | 3 cut(s) | 51, 403, 519 |
| BstF5I | GGATG | 1 cut(s) | 502 |
| BstKTI | GATC | 3 cut(s) | 190, 439, 610 |
| BstMAI | GTCTC | 1 cut(s) | 579 |
| BstMBI | GATC | 3 cut(s) | 187, 436, 607 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 248 |
| BstNI | CCWGG | 1 cut(s) | 644 |
| BstSCI | CCNGG | 1 cut(s) | 642 |
| BstX2I | RGATCY | 1 cut(s) | 607 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 497 |
| BstYI | RGATCY | 1 cut(s) | 607 |
| Bsu15I | ATCGAT | 1 cut(s) | 190 |
| BsuI | GTATCC | 1 cut(s) | 278 |
| BsuRI | GGCC | 3 cut(s) | 45, 510, 654 |
| BsuTUI | ATCGAT | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 502 |
| BtsIMutI | CAGTG | 4 cut(s) | 48, 165, 297, 561 |
| Cac8I | GCNNGC | 1 cut(s) | 540 |
| Cfr13I | GGNCC | 3 cut(s) | 91, 508, 653 |
| ClaI | ATCGAT | 1 cut(s) | 190 |
| DdeI | CTNAG | 3 cut(s) | 51, 403, 519 |
| DpnI | GATC | 3 cut(s) | 189, 438, 609 |
| DpnII | GATC | 3 cut(s) | 187, 436, 607 |
| Eam1104I | CTCTTC | 2 cut(s) | 258, 549 |
| EarI | CTCTTC | 2 cut(s) | 258, 549 |
| Eco32I | GATATC | 1 cut(s) | 300 |
| Eco47I | GGWCC | 1 cut(s) | 91 |
| EcoO109I | RGGNCCY | 1 cut(s) | 508 |
| EcoRII | CCWGG | 1 cut(s) | 642 |
| EcoRV | GATATC | 1 cut(s) | 300 |
| EcoT22I | ATGCAT | 1 cut(s) | 529 |
| FaiI | YATR | 7 cut(s) | 126, 414, 460, 529, 531, 597, 633 |
| FaqI | GGGAC | 2 cut(s) | 104, 640 |
| FauI | CCCGC | 1 cut(s) | 466 |
| FauNDI | CATATG | 1 cut(s) | 529 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 509 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 4 cut(s) | 440, 539, 612, 657 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeIII | GGCC | 3 cut(s) | 45, 510, 654 |
| HinfI | GANTC | 1 cut(s) | 14 |
| HphI | GGTGA | 2 cut(s) | 161, 359 |
| Hpy188I | TCNGA | 2 cut(s) | 304, 619 |
| Hpy188III | TCNNGA | 4 cut(s) | 148, 271, 494, 514 |
| HpyCH4III | ACNGT | 2 cut(s) | 118, 160 |
| HpyCH4V | TGCA | 3 cut(s) | 242, 382, 527 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 248 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 403, 519 |
| Kzo9I | GATC | 3 cut(s) | 187, 436, 607 |
| LguI | GCTCTTC | 2 cut(s) | 258, 549 |
| LmnI | GCTCC | 2 cut(s) | 337, 535 |
| LpnPI | CCDG | 9 cut(s) | 97, 161, 185, 213, 362, 469, 609, 629, 656 |
| LweI | GCATC | 1 cut(s) | 213 |
| MaeI | CTAG | 4 cut(s) | 440, 539, 612, 657 |
| MaeIII | GTNAC | 2 cut(s) | 160, 461 |
| MalI | GATC | 3 cut(s) | 189, 438, 609 |
| MboI | GATC | 3 cut(s) | 187, 436, 607 |
| MboII | GAAGA | 3 cut(s) | 245, 289, 536 |
| MflI | RGATCY | 1 cut(s) | 607 |
| MluCI | AATT | 1 cut(s) | 139 |
| MnlI | CCTC | 7 cut(s) | 56, 224, 318, 347, 499, 521, 526 |
| Mph1103I | ATGCAT | 1 cut(s) | 529 |
| MseI | TTAA | 1 cut(s) | 86 |
| MslI | CAYNNNNRTG | 1 cut(s) | 495 |
| MspCI | CTTAAG | 1 cut(s) | 85 |
| MspR9I | CCNGG | 1 cut(s) | 644 |
| Mva1269I | GAATGC | 2 cut(s) | 397, 529 |
| MvaI | CCWGG | 1 cut(s) | 644 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 248 |
| NdeI | CATATG | 1 cut(s) | 529 |
| NdeII | GATC | 3 cut(s) | 187, 436, 607 |
| NheI | GCTAGC | 1 cut(s) | 538 |
| NlaIV | GGNNCC | 2 cut(s) | 92, 488 |
| NmuCI | GTSAC | 1 cut(s) | 160 |
| NsiI | ATGCAT | 1 cut(s) | 529 |
| PciSI | GCTCTTC | 2 cut(s) | 258, 549 |
| PctI | GAATGC | 2 cut(s) | 397, 529 |
| PfeI | GAWTC | 1 cut(s) | 14 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| Psp6I | CCWGG | 1 cut(s) | 642 |
| PspGI | CCWGG | 1 cut(s) | 642 |
| PspN4I | GGNNCC | 2 cut(s) | 92, 488 |
| PspPI | GGNCC | 3 cut(s) | 91, 508, 653 |
| PsuI | RGATCY | 1 cut(s) | 607 |
| RseI | CAYNNNNRTG | 1 cut(s) | 495 |
| SapI | GCTCTTC | 2 cut(s) | 258, 549 |
| SaqAI | TTAA | 1 cut(s) | 86 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 3 cut(s) | 187, 436, 607 |
| Sau96I | GGNCC | 3 cut(s) | 91, 508, 653 |
| ScrFI | CCNGG | 1 cut(s) | 644 |
| SetI | ASST | 9 cut(s) | 43, 57, 174, 253, 329, 372, 540, 544, 617 |
| SfaNI | GCATC | 1 cut(s) | 213 |
| SinI | GGWCC | 1 cut(s) | 91 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 495 |
| SmlI | CTYRAG | 2 cut(s) | 85, 503 |
| SmoI | CTYRAG | 2 cut(s) | 85, 503 |
| Sse9I | AATT | 1 cut(s) | 139 |
| SsiI | CCGC | 3 cut(s) | 5, 400, 473 |
| SspMI | CTAG | 4 cut(s) | 440, 539, 612, 657 |
| StyD4I | CCNGG | 1 cut(s) | 642 |
| TaaI | ACNGT | 2 cut(s) | 118, 160 |
| TaqI | TCGA | 1 cut(s) | 190 |
| TasI | AATT | 1 cut(s) | 139 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 1 cut(s) | 14 |
| Tru1I | TTAA | 1 cut(s) | 86 |
| Tru9I | TTAA | 1 cut(s) | 86 |
| TscAI | CASTG | 4 cut(s) | 55, 165, 297, 561 |
| TseFI | GTSAC | 1 cut(s) | 160 |
| Tsp45I | GTSAC | 1 cut(s) | 160 |
| TspDTI | ATGAA | 3 cut(s) | 75, 245, 290 |
| TspRI | CASTG | 4 cut(s) | 55, 165, 297, 561 |
| Vha464I | CTTAAG | 1 cut(s) | 85 |
| VpaK11BI | GGWCC | 1 cut(s) | 91 |
| XapI | RAATTY | 1 cut(s) | 139 |
| XspI | CTAG | 4 cut(s) | 440, 539, 612, 657 |
| Zsp2I | ATGCAT | 1 cut(s) | 529 |