Rorug01G0035900

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000338
Physical Location & Seq
Reverse (-)
6025119 .. 6035988
10870 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0035900.1

Sequence Viewer

Length: 2115 bp
ATGGCTGCTGCCTCTGACTTGCTTGGAAAGGCCCAAAATTTGCCATTTGTGAAGCAAATTTTTTCAAAGAATGAGAGCGATTCTGGAGTTATATCAGACGGCATTCAAGTTGGTGGTACTGCTACTGACCCTCTGAGTGGAATCCATCAGGCAGTGATCCTGGCTAAATGCCCTCTAATTGAGAAGAGCACGCGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTGTTCAGGGTATCAAGGAGCCCTCTCCAGGAGTGGCAGACAGGATTCCTTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGTGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTGATATTCTGCTATAGGTGTTCATTGGGTGACATTACTAATGATGATGCCTGCTTTGAAAAAGCCCTAGAAGTTTCAAATGATAGGTCGGCTCGGGCTAAGAGGTCTCTTGCACGCAGTGCATACAACAGGGGGCAATATAGAACATCAAAACTTCTGTGGGAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATAGGGATATTGAGAAGGCACTAGATGGCTTTATACGGGCTGTTCAGCTTGATCCAGAAAATGGGGAGGCACGGAATAATATTGCCTGTTTATTGGTAGAGAATGAGAGCGATTCTGGAGTTATATCAGCCGGCATTCAAGTTGGTGGTACTGCTGCTGACCCTCTGAGTGGAATCCATCAGGCAGTGATCCTGGCTAAATGCCCTCTAATTGAGAAGAGCACACGACATGATGACATGCAGAGATGGGAAATGGCTCCATACATCGAGGCAATTGATTCTCAGCTATCATCATATTTTATTATACGACGATGCTGTGATGTCCTACGTATTCGGTGGGAGTCGACACATAGTCACACAAAGGAATTTGCATTGATGATGATGGAAACATTTGTTCAGGGTATCAAGGAGCCCTCTCCAGGAGTGGCAGACAGGATTCCCTTCTGCTATGGGATTTATATCCCTACAGTTTCAGCCTTGCGGAAGGAATACGGTGAACTTTGTGTCCGCTGTGGTCTGATAGGAGAGGCAGTCAAAATTTTTGAGGACTTGGAATTATGGGATAATCTGATATTCTGCTATAGCCTATTGGAGAAAAAAGCAGCAGCTGTTGAACTGATCAAGACACGGCTTTCTGAAACACCTAATGACCCCAGGTTATGGTGTTCATTGGGTGACGTTACTAATGATGATGCCTGCTTTAAAAAAGCCCTAGAAGTTTCAAACGATAAGTCGGCTCAGGCTAAGCGGTCTCTTGCACGCAGTGCATACAACAGGGGGGAATATAGAACATCAAAACTTCTGTGGCAGTCTGCAATGGCCTTGAATTCTCTGTATCCTGATGGCTGGTTTGCCCTAGGGGCTGCTGCATTAAAGGATGGGGATATTGAGAAGGCACTAGATGGCTTCACTCGGGCTGTTCAGCTTGATCCTGAAAATGGGGAGGCATGGAATAATATTGCTTGTTTGCATATGATAAAAGGGAAGAGCAAAGAAGCTTTTATGGCATTTAGAGAAGCACTGAAGTTCAAACGAAACAGCTACCAACTGTGGGAGAACTACAGCCATGTTGCTTTAGATGTTGGCAATGTTGCTCAGGCTCTAGAAGCTACGCGGAAGGTGTTGGATCTTACTAATAATAAGAGAATTGATGCTGAGTTGTTGGAAAGAATTATGACAGAGGTGGAAAGCATGGCTTCACCTACTACTAATTCAGCAATGACTGATGATGGAGATAACTTTCCCGTCAGTGGGACCACAAATGCAGAATCTGATGTGGGAAAATCTCGGGAAGCTGAGCACTTAGTAGAGTTTCTTGGAAAAGTTCTAGAACAGATTATAGGGGCAACAACTACTAGTACACGTTTTGGAAAGCTGTTAGGAATGGAAAGCTCAAGAATCTTTGTCTTCCCTTCTCATTCTGGTTTGATTTCAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

704

Amino Acids

77.96

Weight (kDa)

5.25

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_2 PF07719 505 - 538 7e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 737, 1335
AccI GTMKAC 1 cut(s) 1019
AccII CGCG 2 cut(s) 193, 1789
AciI CCGC 6 cut(s) 358, 385, 1156, 1183, 1423, 1789
AclWI GGATC 5 cut(s) 151, 722, 859, 1598, 1809
AcsI RAATTY 7 cut(s) 37, 57, 414, 625, 1040, 1212, 1501
AcuI CTGAAG 1 cut(s) 1718
AdeI CACNNNGTG 2 cut(s) 563, 1439
AfaI GTAC 3 cut(s) 118, 826, 2035
AflIII ACRYGT 1 cut(s) 2036
AhdI GACNNNNNGTC 1 cut(s) 1026
AhlI ACTAGT 1 cut(s) 2030
AjnI CCWGG 5 cut(s) 159, 295, 867, 1093, 1328
AloI GAACNNNNNNTCC 4 cut(s) 366, 398, 1164, 1196
Alw21I GWGCWC 3 cut(s) 191, 899, 1977
Alw26I GTCTC 2 cut(s) 555, 1431
AlwI GGATC 5 cut(s) 151, 722, 859, 1598, 1809
AlwNI CAGNNNCTG 2 cut(s) 1283, 1946
Ama87I CYCGRG 3 cut(s) 537, 1587, 1962
AoxI GGCC 3 cut(s) 30, 618, 1494
ApeKI GCWGC 9 cut(s) 5, 8, 662, 665, 830, 1277, 1280, 1538, 1541
ApoI RAATTY 7 cut(s) 37, 57, 414, 625, 1040, 1212, 1501
ArsI GACNNNNNNTTYG 4 cut(s) 515, 547, 1391, 1423
AspA2I CCTAGG 2 cut(s) 655, 1531
AspS9I GGNCC 2 cut(s) 31, 1929
AsuHPI GGTGA 5 cut(s) 383, 485, 1181, 1361, 1866
AvaI CYCGRG 3 cut(s) 537, 1587, 1962
AvaII GGWCC 1 cut(s) 1929
AvrII CCTAGG 2 cut(s) 655, 1531
BanII GRGCYC 2 cut(s) 291, 1089
BbsI GAAGAC 1 cut(s) 2074
Bbv12I GWGCWC 3 cut(s) 191, 899, 1977
BbvI GCAGC 7 cut(s) 649, 652, 817, 1289, 1292, 1525, 1528
BceAI ACGGC 2 cut(s) 115, 1319
BciT130I CCWGG 5 cut(s) 161, 297, 869, 1095, 1330
BciVI GTATCC 2 cut(s) 645, 1521
BclI TGATCA 1 cut(s) 1293
BcoDI GTCTC 2 cut(s) 555, 1431
BcuI ACTAGT 1 cut(s) 2030
BfaI CTAG 9 cut(s) 512, 656, 698, 1388, 1532, 1574, 1778, 2003, 2031
BfmI CTRYAG 5 cut(s) 342, 457, 1140, 1255, 1735
BfuI GTATCC 2 cut(s) 645, 1521
BglI GCCNNNNNGGC 2 cut(s) 659, 1535
BisI GCNGC 9 cut(s) 6, 9, 663, 666, 831, 1278, 1281, 1539, 1542
BlnI CCTAGG 2 cut(s) 655, 1531
BlpI GCTNAGC 2 cut(s) 1419, 1971
BlsI GCNGC 9 cut(s) 7, 10, 664, 667, 832, 1279, 1282, 1540, 1543
Bme1390I CCNGG 5 cut(s) 161, 297, 869, 1095, 1330
Bme18I GGWCC 1 cut(s) 1929
BmeRI GACNNNNNGTC 1 cut(s) 1026
BmeT110I CYCGRG 3 cut(s) 537, 1587, 1962
BmgT120I GGNCC 2 cut(s) 31, 1929
BmiI GGNNCC 5 cut(s) 225, 288, 933, 1086, 1930
BmrFI CCNGG 5 cut(s) 161, 297, 869, 1095, 1330
BmsI GCATC 4 cut(s) 481, 977, 1357, 1816
BpiI GAAGAC 1 cut(s) 2074
BpmI CTGGAG 4 cut(s) 105, 279, 813, 1077
Bpu10I CCTNAGC 2 cut(s) 1413, 1770
Bpu1102I GCTNAGC 2 cut(s) 1419, 1971
BpuEI CTTGAG 1 cut(s) 2053
BsaAI YACGTR 1 cut(s) 1004
BsaBI GATNNNNATC 2 cut(s) 335, 1133
BsaI GGTCTC 2 cut(s) 555, 1431
BsaJI CCNNGG 3 cut(s) 655, 1328, 1531
BsaXI ACNNNNNCTCC 4 cut(s) 393, 423, 1191, 1221
Bse118I RCCGGY 1 cut(s) 806
Bse3DI GCAATG 4 cut(s) 621, 1497, 1768, 1899
Bse8I GATNNNNATC 2 cut(s) 335, 1133
BseBI CCWGG 5 cut(s) 161, 297, 869, 1095, 1330
BseDI CCNNGG 3 cut(s) 655, 1328, 1531
BseGI GGATG 1 cut(s) 1558
BseJI GATNNNNATC 2 cut(s) 335, 1133
BseMI GCAATG 4 cut(s) 621, 1497, 1768, 1899
BseMII CTCAG 8 cut(s) 125, 263, 833, 971, 1427, 1784, 1821, 1962
BseXI GCAGC 7 cut(s) 649, 652, 817, 1289, 1292, 1525, 1528
Bsh1236I CGCG 2 cut(s) 193, 1789
BshFI GGCC 3 cut(s) 32, 620, 1496
BsiHKAI GWGCWC 3 cut(s) 191, 899, 1977
BsiHKCI CYCGRG 3 cut(s) 537, 1587, 1962
BsiSI CCGG 1 cut(s) 807
BslFI GGGAC 1 cut(s) 1942
BsmAI GTCTC 2 cut(s) 555, 1431
BsmFI GGGAC 1 cut(s) 1942
BsmI GAATGC 2 cut(s) 102, 810
BsnI GGCC 3 cut(s) 32, 620, 1496
Bso31I GGTCTC 2 cut(s) 555, 1431
BsoBI CYCGRG 3 cut(s) 537, 1587, 1962
Bsp1286I GDGCHC 5 cut(s) 191, 291, 899, 1089, 1977
Bsp143I GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
Bsp1720I GCTNAGC 2 cut(s) 1419, 1971
BspACI CCGC 6 cut(s) 358, 385, 1156, 1183, 1423, 1789
BspANI GGCC 3 cut(s) 32, 620, 1496
BspCNI CTCAG 8 cut(s) 126, 262, 834, 970, 1426, 1783, 1822, 1963
BspFNI CGCG 2 cut(s) 193, 1789
BspLI GGNNCC 5 cut(s) 225, 288, 933, 1086, 1930
BspPI GGATC 5 cut(s) 151, 722, 859, 1598, 1809
BspQI GCTCTTC 3 cut(s) 179, 887, 1655
BspTNI GGTCTC 2 cut(s) 555, 1431
BsrDI GCAATG 4 cut(s) 621, 1497, 1768, 1899
BsrFI RCCGGY 1 cut(s) 806
BssAI RCCGGY 1 cut(s) 806
BssECI CCNNGG 3 cut(s) 655, 1328, 1531
BssMI GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
BssT1I CCWWGG 2 cut(s) 655, 1531
Bst2UI CCWGG 5 cut(s) 161, 297, 869, 1095, 1330
Bst4CI ACNGT 5 cut(s) 346, 371, 1144, 1169, 1725
Bst6I CTCTTC 3 cut(s) 179, 887, 1655
BstAPI GCANNNNNTGC 2 cut(s) 563, 1439
BstBAI YACGTR 1 cut(s) 1004
BstC8I GCNNGC 6 cut(s) 191, 496, 559, 808, 1372, 1435
BstF5I GGATG 1 cut(s) 1558
BstFNI CGCG 2 cut(s) 193, 1789
BstKTI GATC 6 cut(s) 159, 730, 867, 1296, 1606, 1804
BstMAI GTCTC 2 cut(s) 555, 1431
BstMBI GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
BstMWI GCNNNNNNNGC 6 cut(s) 563, 659, 1439, 1535, 1679, 1781
BstNI CCWGG 5 cut(s) 161, 297, 869, 1095, 1330
BstNSI RCATGY 2 cut(s) 208, 916
BstSCI CCNGG 5 cut(s) 159, 295, 867, 1093, 1328
BstSFI CTRYAG 5 cut(s) 342, 457, 1140, 1255, 1735
BstSNI TACGTA 1 cut(s) 1004
BstUI CGCG 2 cut(s) 193, 1789
BstV1I GCAGC 7 cut(s) 649, 652, 817, 1289, 1292, 1525, 1528
BstV2I GAAGAC 1 cut(s) 2074
BstX2I RGATCY 1 cut(s) 1801
BstYI RGATCY 1 cut(s) 1801
BsuI GTATCC 2 cut(s) 645, 1521
BsuRI GGCC 3 cut(s) 32, 620, 1496
BtsCI GGATG 1 cut(s) 1558
BtsI GCAGTG 4 cut(s) 159, 568, 867, 1444
BtsIMutI CAGTG 6 cut(s) 159, 568, 867, 1444, 1694, 1930
Cac8I GCNNGC 6 cut(s) 191, 496, 559, 808, 1372, 1435
CaiI CAGNNNCTG 2 cut(s) 1283, 1946
Cfr10I RCCGGY 1 cut(s) 806
Cfr13I GGNCC 2 cut(s) 31, 1929
Csp6I GTAC 3 cut(s) 117, 825, 2034
CviAII CATG 7 cut(s) 197, 205, 905, 913, 1623, 1742, 1867
CviQI GTAC 3 cut(s) 117, 825, 2034
DpnI GATC 6 cut(s) 158, 729, 866, 1295, 1605, 1803
DpnII GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
DraI TTTAAA 1 cut(s) 1378
DraIII CACNNNGTG 2 cut(s) 563, 1439
DriI GACNNNNNGTC 1 cut(s) 1026
Eam1104I CTCTTC 3 cut(s) 179, 887, 1655
Eam1105I GACNNNNNGTC 1 cut(s) 1026
EarI CTCTTC 3 cut(s) 179, 887, 1655
Eco105I TACGTA 1 cut(s) 1004
Eco130I CCWWGG 2 cut(s) 655, 1531
Eco24I GRGCYC 2 cut(s) 291, 1089
Eco31I GGTCTC 2 cut(s) 555, 1431
Eco47I GGWCC 1 cut(s) 1929
Eco57I CTGAAG 1 cut(s) 1718
Eco88I CYCGRG 3 cut(s) 537, 1587, 1962
EcoRI GAATTC 2 cut(s) 625, 1501
EcoRII CCWGG 5 cut(s) 159, 295, 867, 1093, 1328
EcoT14I CCWWGG 2 cut(s) 655, 1531
EcoT38I GRGCYC 2 cut(s) 291, 1089
ErhI CCWWGG 2 cut(s) 655, 1531
FaeI CATG 7 cut(s) 200, 208, 908, 916, 1626, 1745, 1870
FalI AAGNNNNNCTT 2 cut(s) 1855, 1887
FaqI GGGAC 1 cut(s) 1942
FatI CATG 7 cut(s) 196, 204, 904, 912, 1622, 1741, 1866
FauNDI CATATG 1 cut(s) 1647
FbaI TGATCA 1 cut(s) 1293
FblI GTMKAC 1 cut(s) 1019
Fnu4HI GCNGC 9 cut(s) 6, 9, 663, 666, 831, 1278, 1281, 1539, 1542
FokI GGATG 1 cut(s) 1565
FriOI GRGCYC 2 cut(s) 291, 1089
Fsp4HI GCNGC 9 cut(s) 6, 9, 663, 666, 831, 1278, 1281, 1539, 1542
FspBI CTAG 9 cut(s) 512, 656, 698, 1388, 1532, 1574, 1778, 2003, 2031
GluI GCNGC 9 cut(s) 6, 9, 663, 666, 831, 1278, 1281, 1539, 1542
GsuI CTGGAG 4 cut(s) 105, 279, 813, 1077
HaeIII GGCC 3 cut(s) 32, 620, 1496
HapII CCGG 1 cut(s) 807
Hin1II CATG 7 cut(s) 200, 208, 908, 916, 1626, 1745, 1870
HincII GTYRAC 1 cut(s) 1020
HindII GTYRAC 1 cut(s) 1020
HindIII AAGCTT 1 cut(s) 1671
HpaII CCGG 1 cut(s) 807
HphI GGTGA 5 cut(s) 383, 485, 1181, 1361, 1866
Hpy166II GTNNAC 4 cut(s) 374, 1020, 1172, 2036
Hpy8I GTNNAC 4 cut(s) 374, 1020, 1172, 2036
Hpy99I CGWCG 1 cut(s) 987
HpyAV CCTTC 7 cut(s) 355, 685, 1126, 1153, 1561, 1786, 2097
HpyCH4III ACNGT 5 cut(s) 346, 371, 1144, 1169, 1725
HpyCH4IV ACGT 3 cut(s) 1003, 1353, 2038
HpyF10VI GCNNNNNNNGC 6 cut(s) 563, 659, 1439, 1535, 1679, 1781
HpySE526I ACGT 3 cut(s) 1003, 1353, 2038
Hsp92II CATG 7 cut(s) 200, 208, 908, 916, 1626, 1745, 1870
KroI GCCGGC 1 cut(s) 806
KroNI GCCGGC 1 cut(s) 808
Ksp22I TGATCA 1 cut(s) 1293
Kzo9I GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
LguI GCTCTTC 3 cut(s) 179, 887, 1655
LmnI GCTCC 4 cut(s) 229, 286, 937, 1084
Lsp1109I GCAGC 7 cut(s) 649, 652, 817, 1289, 1292, 1525, 1528
LweI GCATC 4 cut(s) 481, 977, 1357, 1816
MaeI CTAG 9 cut(s) 512, 656, 698, 1388, 1532, 1574, 1778, 2003, 2031
MaeII ACGT 3 cut(s) 1003, 1353, 2038
MaeIII GTNAC 4 cut(s) 473, 1028, 1349, 1354
MalI GATC 6 cut(s) 158, 729, 866, 1295, 1605, 1803
MboI GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
MboII GAAGA 4 cut(s) 196, 904, 1672, 2074
MfeI CAATTG 2 cut(s) 240, 948
MflI RGATCY 1 cut(s) 1801
MhlI GDGCHC 5 cut(s) 191, 291, 899, 1089, 1977
MlyI GAGTC 2 cut(s) 617, 1025
MmeI TCCRAC 2 cut(s) 1779, 1818
MroNI GCCGGC 1 cut(s) 806
MseI TTAA 3 cut(s) 671, 1377, 1547
MspA1I CMGCKG 3 cut(s) 387, 1185, 1283
MspI CCGG 1 cut(s) 807
MspR9I CCNGG 5 cut(s) 161, 297, 869, 1095, 1330
MunI CAATTG 2 cut(s) 240, 948
Mva1269I GAATGC 2 cut(s) 102, 810
MvaI CCWGG 5 cut(s) 161, 297, 869, 1095, 1330
MvnI CGCG 2 cut(s) 193, 1789
MwoI GCNNNNNNNGC 6 cut(s) 563, 659, 1439, 1535, 1679, 1781
NaeI GCCGGC 1 cut(s) 808
NdeI CATATG 1 cut(s) 1647
NdeII GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
NgoMIV GCCGGC 1 cut(s) 806
NlaIII CATG 7 cut(s) 200, 208, 908, 916, 1626, 1745, 1870
NlaIV GGNNCC 5 cut(s) 225, 288, 933, 1086, 1930
NmuCI GTSAC 3 cut(s) 473, 1028, 1349
NspI RCATGY 2 cut(s) 208, 916
PciSI GCTCTTC 3 cut(s) 179, 887, 1655
PctI GAATGC 2 cut(s) 102, 810
PdiI GCCGGC 1 cut(s) 808
PflMI CCANNNNNTGG 2 cut(s) 737, 1335
PfoI TCCNGGA 2 cut(s) 295, 1093
PkrI GCNGC 9 cut(s) 7, 10, 664, 667, 832, 1279, 1282, 1540, 1543
PleI GAGTC 2 cut(s) 616, 1024
PpsI GAGTC 2 cut(s) 616, 1024
Ppu21I YACGTR 1 cut(s) 1004
Psp6I CCWGG 5 cut(s) 159, 295, 867, 1093, 1328
PspGI CCWGG 5 cut(s) 159, 295, 867, 1093, 1328
PspN4I GGNNCC 5 cut(s) 225, 288, 933, 1086, 1930
PspPI GGNCC 2 cut(s) 31, 1929
PstNI CAGNNNCTG 2 cut(s) 1283, 1946
PsuI RGATCY 1 cut(s) 1801
PvuII CAGCTG 1 cut(s) 1283
RsaI GTAC 3 cut(s) 118, 826, 2035
RsaNI GTAC 3 cut(s) 117, 825, 2034
SalI GTCGAC 1 cut(s) 1018
SapI GCTCTTC 3 cut(s) 179, 887, 1655
SaqAI TTAA 3 cut(s) 671, 1377, 1547
SatI GCNGC 9 cut(s) 6, 9, 663, 666, 831, 1278, 1281, 1539, 1542
Sau3AI GATC 6 cut(s) 156, 727, 864, 1293, 1603, 1801
Sau96I GGNCC 2 cut(s) 31, 1929
SchI GAGTC 2 cut(s) 617, 1025
ScrFI CCNGG 5 cut(s) 161, 297, 869, 1095, 1330
SduI GDGCHC 5 cut(s) 191, 291, 899, 1089, 1977
SfaNI GCATC 4 cut(s) 481, 977, 1357, 1816
SfcI CTRYAG 5 cut(s) 342, 457, 1140, 1255, 1735
SinI GGWCC 1 cut(s) 1929
SmlI CTYRAG 1 cut(s) 2068
SmoI CTYRAG 1 cut(s) 2068
SnaBI TACGTA 1 cut(s) 1004
SpeI ACTAGT 1 cut(s) 2030
SsiI CCGC 6 cut(s) 358, 385, 1156, 1183, 1423, 1789
SspI AATATT 2 cut(s) 757, 1633
SspMI CTAG 9 cut(s) 512, 656, 698, 1388, 1532, 1574, 1778, 2003, 2031
StyD4I CCNGG 5 cut(s) 159, 295, 867, 1093, 1328
StyI CCWWGG 2 cut(s) 655, 1531
TaaI ACNGT 5 cut(s) 346, 371, 1144, 1169, 1725
TaiI ACGT 3 cut(s) 1006, 1356, 2041
TaqI TCGA 3 cut(s) 234, 942, 1019
TatI WGTACW 1 cut(s) 2033
Tru1I TTAA 3 cut(s) 671, 1377, 1547
Tru9I TTAA 3 cut(s) 671, 1377, 1547
TscAI CASTG 6 cut(s) 159, 568, 867, 1444, 1701, 1930
TseFI GTSAC 3 cut(s) 473, 1028, 1349
TseI GCWGC 9 cut(s) 5, 8, 662, 665, 830, 1277, 1280, 1538, 1541
Tsp45I GTSAC 3 cut(s) 473, 1028, 1349
TspDTI ATGAA 2 cut(s) 456, 1332
TspGWI ACGGA 1 cut(s) 763
TspRI CASTG 6 cut(s) 159, 568, 867, 1444, 1701, 1930
Van91I CCANNNNNTGG 2 cut(s) 737, 1335
VpaK11BI GGWCC 1 cut(s) 1929
XapI RAATTY 7 cut(s) 37, 57, 414, 625, 1040, 1212, 1501
XbaI TCTAGA 2 cut(s) 1777, 2002
XceI RCATGY 2 cut(s) 208, 916
XmaJI CCTAGG 2 cut(s) 655, 1531
XmiI GTMKAC 1 cut(s) 1019
XspI CTAG 9 cut(s) 512, 656, 698, 1388, 1532, 1574, 1778, 2003, 2031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.