Rorug06G0044300

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000338
Physical Location & Seq
Forward (+)
5664615 .. 5668054
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0044300.1

Sequence Viewer

Length: 1446 bp
ATGCAAATAACTTTACATTGTCTAACAATGGTATTTGGTTCTTGCAACAAAACCATGAACTGGGTTTGTTTGCATTTGCTTCTGCTAGTTATTTTCTCGACCAATGCAGTTTACTGTGGCACACTGGTCAAGTCTATTCCCGGGTTCGACGGTGAACTTCCTTTCAAGCTCTACACTGGGTATACGACTGTTAATGGCTCAGAGATGTTTTACTACTTCATTGAGTCAGAAGGAACCCCCAAAGAAGACCCTTTGTTGCTGTGGTACAGTGGAGGCCCTGGTTGTTCTGCTTTCAATGGTCTCATTTACGAAAACGGTCCCTTGGCTTTCAACGACACAGATTATGAAGGCGGTGTACCAAAAACATTTTACTATCCATACTCATGGTCAAGGACTGCAAGCCTATTGTTTGTGGATGCACCTGTTGGCACTGGTTTCTCTTATGCAACTGATGCATCAGAATACGCTACCTCCGATACAAAAACAGCAGCACAGGTTTACCAGTTCTTGAGAACGTGGTTGAATGAGCACCCGCAATACCTCAAGGTTCAGTTGTTTGTTGGGGCTGATTCGTATTCAGGCATATCGGGAACCATTGTTGTTGAACATATAATGGCTGGTAATGATGCCGGATTTAAGCCACGCCTGAATCTCAAGGGCTATATTCTAGGGTGTCCAAAAACAGATTCAACTATCAATGAGAATTCTAAGTACTCCTATTCTCACCGGATGGCACTTATATCAGATGAACTCTATTATTCGGCTAAAAACAGCTGTAATTCAGATTTCTATGGAGCAACTGTTGATGAACCAGAATGTTACGAGGATGTTCACTTGATTGCAAGGCAAATTAAAGACATAAACAAAAACCATATTCTGGAGCCAAAATGCACATGGGCTTCACCAGTACCCGATGGAGATTCAGCTCGTAGATCTATGCAGGAATACGAATACCCGGAAGACTTCCTCCGGTCACCTCTAAAAAATCCTGAATTCTGTCACAACTTTAACTATGCGCTATCCTACGTATGGGCAAACGATGATGATGTACGAGCGGCACTTAATATCAGAAATGGAACAGTATTTGATTGGAAGAGATGCAACAAGAGCTTGGATTACACATATGATGTGACAAGTGTCCTCGAATATCATCAAAATCTCAGTACCAAGGGATTACAAGTTCTGATATTCAATGGTGATCATGACCTGACAATTCCGAACACCGGCACGGAAGAGTGGATTAAAAAATTGGGTTTGACTGTTGTTAATGACTGGAGACCATGGCTAGTTGATGGTCAGATTGCAGGATACACCATCAAGTATTCAGAAAATGGATACCGCTTGACATATGCAACCTTAAAGGGGGCAGGTCACTCACCTCAAGAATACAAGCGTCGAGAAGGTTATGACATGTTCGACAGGTTCATCCATTACTATCCCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

481

Amino Acids

54.72

Weight (kDa)

5.21

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 47 - 477 2.6e-109 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1358
AccB7I CCANNNNNTGG 2 cut(s) 60, 877
AccBSI CCGCTC 1 cut(s) 1055
AccI GTMKAC 1 cut(s) 182
AciI CCGC 4 cut(s) 351, 533, 1055, 1339
AcsI RAATTY 2 cut(s) 703, 992
AfaI GTAC 6 cut(s) 266, 357, 713, 909, 1050, 1165
AfiI CCNNNNNNNGG 5 cut(s) 60, 877, 1029, 1223, 1362
AflIII ACRYGT 1 cut(s) 1410
AgsI TTSAA 7 cut(s) 166, 295, 331, 523, 605, 690, 1192
AjnI CCWGG 1 cut(s) 277
AjuI GAANNNNNNNTTGG 2 cut(s) 670, 702
AloI GAACNNNNNNTCC 2 cut(s) 1164, 1196
AluBI AGCT 4 cut(s) 169, 774, 926, 1110
AluI AGCT 4 cut(s) 169, 774, 926, 1110
Alw21I GWGCWC 1 cut(s) 531
Alw26I GTCTC 2 cut(s) 305, 1270
Ama87I CYCGRG 1 cut(s) 140
AoxI GGCC 1 cut(s) 274
ApeKI GCWGC 1 cut(s) 488
ApoI RAATTY 2 cut(s) 703, 992
AspLEI GCGC 1 cut(s) 1018
AspS9I GGNCC 2 cut(s) 275, 317
AsuC2I CCSGG 3 cut(s) 141, 142, 956
AsuHPI GGTGA 6 cut(s) 164, 716, 894, 966, 1208, 1368
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 1 cut(s) 317
BarI GAAGNNNNNNTAC 2 cut(s) 339, 371
BbsI GAAGAC 2 cut(s) 252, 966
Bbv12I GWGCWC 1 cut(s) 531
BbvI GCAGC 1 cut(s) 500
BccI CCATC 4 cut(s) 724, 908, 1286, 1322
BciT130I CCWGG 1 cut(s) 279
BciVI GTATCC 2 cut(s) 1301, 1328
BclI TGATCA 1 cut(s) 1198
BcnI CCSGG 3 cut(s) 141, 142, 956
BcoDI GTCTC 2 cut(s) 305, 1270
BfaI CTAG 4 cut(s) 86, 668, 1286, 1444
BfuAI ACCTGC 1 cut(s) 1358
BfuI GTATCC 2 cut(s) 1301, 1328
BglII AGATCT 1 cut(s) 932
BisI GCNGC 2 cut(s) 489, 1056
BlsI GCNGC 2 cut(s) 490, 1057
BmcAI AGTACT 1 cut(s) 713
Bme1390I CCNGG 4 cut(s) 141, 142, 279, 956
Bme18I GGWCC 1 cut(s) 317
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 2 cut(s) 275, 317
BmiI GGNNCC 4 cut(s) 235, 319, 592, 882
BmrFI CCNGG 4 cut(s) 141, 142, 279, 956
BmrI ACTGGG 2 cut(s) 70, 186
BmsI GCATC 5 cut(s) 406, 442, 464, 616, 1088
BmuI ACTGGG 2 cut(s) 70, 186
BoxI GACNNNNGTC 1 cut(s) 1136
BpiI GAAGAC 2 cut(s) 252, 966
BpmI CTGGAG 2 cut(s) 899, 1294
BpuEI CTTGAG 4 cut(s) 527, 529, 638, 1365
BpuMI CCSGG 3 cut(s) 141, 142, 956
BsaAI YACGTR 1 cut(s) 1027
BsaI GGTCTC 2 cut(s) 305, 1270
BsaJI CCNNGG 5 cut(s) 140, 277, 321, 1167, 1280
BsaWI WCCGGW 2 cut(s) 726, 969
BsaXI ACNNNNNCTCC 4 cut(s) 455, 485, 786, 816
Bsc4I CCNNNNNNNGG 5 cut(s) 60, 877, 1029, 1223, 1362
Bse118I RCCGGY 1 cut(s) 1223
Bse1I ACTGG 7 cut(s) 65, 129, 181, 436, 502, 905, 1277
BseBI CCWGG 1 cut(s) 279
BseDI CCNNGG 5 cut(s) 140, 277, 321, 1167, 1280
BseGI GGATG 4 cut(s) 421, 735, 832, 1425
BseLI CCNNNNNNNGG 5 cut(s) 60, 877, 1029, 1223, 1362
BseMII CTCAG 2 cut(s) 213, 1174
BseNI ACTGG 7 cut(s) 65, 129, 181, 436, 502, 905, 1277
BseXI GCAGC 1 cut(s) 500
BshFI GGCC 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 531
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 6 cut(s) 141, 630, 727, 956, 970, 1224
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 5 cut(s) 60, 877, 1029, 1223, 1362
BsmAI GTCTC 2 cut(s) 305, 1270
BsmFI GGGAC 1 cut(s) 303
BsnI GGCC 1 cut(s) 276
Bso31I GGTCTC 2 cut(s) 305, 1270
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 531
Bsp143I GATC 2 cut(s) 932, 1198
Bsp19I CCATGG 1 cut(s) 1280
BspACI CCGC 4 cut(s) 351, 533, 1055, 1339
BspANI GGCC 1 cut(s) 276
BspCNI CTCAG 2 cut(s) 212, 1173
BspHI TCATGA 1 cut(s) 1201
BspLI GGNNCC 4 cut(s) 235, 319, 592, 882
BspMI ACCTGC 1 cut(s) 1358
BspTNI GGTCTC 2 cut(s) 305, 1270
BsrBI CCGCTC 1 cut(s) 1055
BsrFI RCCGGY 1 cut(s) 1223
BsrI ACTGG 7 cut(s) 65, 129, 181, 436, 502, 905, 1277
BssAI RCCGGY 1 cut(s) 1223
BssECI CCNNGG 5 cut(s) 140, 277, 321, 1167, 1280
BssMI GATC 2 cut(s) 932, 1198
BssNAI GTATAC 1 cut(s) 183
BssT1I CCWWGG 3 cut(s) 321, 1167, 1280
Bst1107I GTATAC 1 cut(s) 183
Bst2UI CCWGG 1 cut(s) 279
Bst4CI ACNGT 8 cut(s) 116, 152, 190, 269, 317, 802, 1081, 1261
Bst6I CTCTTC 2 cut(s) 1088, 1227
BstAPI GCANNNNNTGC 1 cut(s) 452
BstBAI YACGTR 1 cut(s) 1027
BstC8I GCNNGC 1 cut(s) 400
BstDEI CTNAG 3 cut(s) 199, 708, 1160
BstDSI CCRYGG 1 cut(s) 1280
BstEII GGTNACC 1 cut(s) 972
BstF5I GGATG 4 cut(s) 421, 735, 832, 1425
BstHHI GCGC 1 cut(s) 1018
BstKTI GATC 2 cut(s) 935, 1201
BstMAI GTCTC 2 cut(s) 305, 1270
BstMBI GATC 2 cut(s) 932, 1198
BstMWI GCNNNNNNNGC 2 cut(s) 452, 1107
BstNI CCWGG 1 cut(s) 279
BstNSI RCATGY 1 cut(s) 1414
BstPAI GACNNNNGTC 1 cut(s) 1136
BstPI GGTNACC 1 cut(s) 972
BstSCI CCNGG 4 cut(s) 139, 140, 277, 954
BstSNI TACGTA 1 cut(s) 1027
BstV1I GCAGC 1 cut(s) 500
BstV2I GAAGAC 2 cut(s) 252, 966
BstX2I RGATCY 1 cut(s) 932
BstXI CCANNNNNNTGG 1 cut(s) 384
BstYI RGATCY 1 cut(s) 932
BstZ17I GTATAC 1 cut(s) 183
BsuI GTATCC 2 cut(s) 1301, 1328
BsuRI GGCC 1 cut(s) 276
BtgI CCRYGG 1 cut(s) 1280
BtsCI GGATG 4 cut(s) 421, 735, 832, 1425
BtsIMutI CAGTG 4 cut(s) 122, 174, 274, 429
BveI ACCTGC 1 cut(s) 1358
Cac8I GCNNGC 1 cut(s) 400
CciI TCATGA 1 cut(s) 1201
CfoI GCGC 1 cut(s) 1018
Cfr10I RCCGGY 1 cut(s) 1223
Cfr13I GGNCC 2 cut(s) 275, 317
Cfr9I CCCGGG 1 cut(s) 140
CseI GACGC 1 cut(s) 1382
Csp6I GTAC 6 cut(s) 265, 356, 712, 908, 1049, 1164
CviAII CATG 6 cut(s) 55, 384, 894, 1202, 1281, 1411
CviQI GTAC 6 cut(s) 265, 356, 712, 908, 1049, 1164
DdeI CTNAG 3 cut(s) 199, 708, 1160
DpnI GATC 2 cut(s) 934, 1200
DpnII GATC 2 cut(s) 932, 1198
Eam1104I CTCTTC 2 cut(s) 1088, 1227
EarI CTCTTC 2 cut(s) 1088, 1227
Eco105I TACGTA 1 cut(s) 1027
Eco130I CCWWGG 3 cut(s) 321, 1167, 1280
Eco31I GGTCTC 2 cut(s) 305, 1270
Eco47I GGWCC 1 cut(s) 317
Eco88I CYCGRG 1 cut(s) 140
Eco91I GGTNACC 1 cut(s) 972
EcoO109I RGGNCCY 1 cut(s) 275
EcoO65I GGTNACC 1 cut(s) 972
EcoRI GAATTC 2 cut(s) 703, 992
EcoRII CCWGG 1 cut(s) 277
EcoT14I CCWWGG 3 cut(s) 321, 1167, 1280
EcoT22I ATGCAT 1 cut(s) 457
ErhI CCWWGG 3 cut(s) 321, 1167, 1280
FaeI CATG 6 cut(s) 58, 387, 897, 1205, 1284, 1414
FaqI GGGAC 1 cut(s) 303
FatI CATG 6 cut(s) 54, 383, 893, 1201, 1280, 1410
FauI CCCGC 1 cut(s) 540
FauNDI CATATG 2 cut(s) 1123, 1348
FbaI TGATCA 1 cut(s) 1198
FblI GTMKAC 1 cut(s) 182
Fnu4HI GCNGC 2 cut(s) 489, 1056
FokI GGATG 4 cut(s) 428, 742, 839, 1412
Fsp4HI GCNGC 2 cut(s) 489, 1056
FspBI CTAG 4 cut(s) 86, 668, 1286, 1444
GlaI GCGC 1 cut(s) 1017
GluI GCNGC 2 cut(s) 489, 1056
GsuI CTGGAG 2 cut(s) 899, 1294
HaeIII GGCC 1 cut(s) 276
HapII CCGG 6 cut(s) 141, 630, 727, 956, 970, 1224
HgaI GACGC 1 cut(s) 1382
HhaI GCGC 1 cut(s) 1018
Hin1II CATG 6 cut(s) 58, 387, 897, 1205, 1284, 1414
Hin6I GCGC 1 cut(s) 1016
HinP1I GCGC 1 cut(s) 1016
HinfI GANTC 5 cut(s) 224, 569, 649, 686, 920
HpaII CCGG 6 cut(s) 141, 630, 727, 956, 970, 1224
HphI GGTGA 6 cut(s) 164, 716, 894, 966, 1208, 1368
Hpy166II GTNNAC 6 cut(s) 112, 155, 183, 356, 499, 832
Hpy188III TCNNGA 8 cut(s) 97, 508, 588, 878, 989, 1202, 1382, 1397
Hpy8I GTNNAC 6 cut(s) 112, 155, 183, 356, 499, 832
Hpy99I CGWCG 2 cut(s) 152, 1398
HpyAV CCTTC 3 cut(s) 224, 341, 1394
HpyCH4III ACNGT 8 cut(s) 116, 152, 190, 269, 317, 802, 1081, 1261
HpyCH4IV ACGT 2 cut(s) 515, 1026
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 1107
HpyF3I CTNAG 3 cut(s) 199, 708, 1160
HpySE526I ACGT 2 cut(s) 515, 1026
Hsp92II CATG 6 cut(s) 58, 387, 897, 1205, 1284, 1414
HspAI GCGC 1 cut(s) 1016
Ksp22I TGATCA 1 cut(s) 1198
Kzo9I GATC 2 cut(s) 932, 1198
LmnI GCTCC 2 cut(s) 794, 880
Lsp1109I GCAGC 1 cut(s) 500
LweI GCATC 5 cut(s) 406, 442, 464, 616, 1088
MaeI CTAG 4 cut(s) 86, 668, 1286, 1444
MaeII ACGT 2 cut(s) 515, 1026
MaeIII GTNAC 5 cut(s) 818, 972, 998, 1129, 1370
MalI GATC 2 cut(s) 934, 1200
MbiI CCGCTC 1 cut(s) 1055
MboI GATC 2 cut(s) 932, 1198
MboII GAAGA 4 cut(s) 257, 971, 1105, 1244
MflI RGATCY 1 cut(s) 932
MhlI GDGCHC 1 cut(s) 531
MluCI AATT 6 cut(s) 703, 778, 849, 992, 1212, 1247
MlyI GAGTC 1 cut(s) 233
MnlI CCTC 8 cut(s) 266, 481, 551, 817, 977, 987, 1151, 1389
Mph1103I ATGCAT 1 cut(s) 457
MseI TTAA 8 cut(s) 192, 636, 852, 1008, 1062, 1242, 1266, 1358
MslI CAYNNNNRTG 1 cut(s) 382
MspA1I CMGCKG 1 cut(s) 774
MspI CCGG 6 cut(s) 141, 630, 727, 956, 970, 1224
MspR9I CCNGG 4 cut(s) 141, 142, 279, 956
MvaI CCWGG 1 cut(s) 279
MwoI GCNNNNNNNGC 2 cut(s) 452, 1107
NciI CCSGG 3 cut(s) 141, 142, 956
NcoI CCATGG 1 cut(s) 1280
NdeI CATATG 2 cut(s) 1123, 1348
NdeII GATC 2 cut(s) 932, 1198
NlaIII CATG 6 cut(s) 58, 387, 897, 1205, 1284, 1414
NlaIV GGNNCC 4 cut(s) 235, 319, 592, 882
NmuCI GTSAC 4 cut(s) 972, 998, 1129, 1370
NsiI ATGCAT 1 cut(s) 457
NspI RCATGY 1 cut(s) 1414
PagI TCATGA 1 cut(s) 1201
PciI ACATGT 1 cut(s) 1410
PcsI WCGNNNNNNNCGW 1 cut(s) 471
PfeI GAWTC 4 cut(s) 569, 649, 686, 920
PflMI CCANNNNNTGG 2 cut(s) 60, 877
PkrI GCNGC 2 cut(s) 490, 1057
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
Ppu21I YACGTR 1 cut(s) 1027
PscI ACATGT 1 cut(s) 1410
PshAI GACNNNNGTC 1 cut(s) 1136
Psp6I CCWGG 1 cut(s) 277
PspEI GGTNACC 1 cut(s) 972
PspGI CCWGG 1 cut(s) 277
PspN4I GGNNCC 4 cut(s) 235, 319, 592, 882
PspPI GGNCC 2 cut(s) 275, 317
PsuI RGATCY 1 cut(s) 932
PvuII CAGCTG 1 cut(s) 774
RsaI GTAC 6 cut(s) 266, 357, 713, 909, 1050, 1165
RsaNI GTAC 6 cut(s) 265, 356, 712, 908, 1049, 1164
RseI CAYNNNNRTG 1 cut(s) 382
SaqAI TTAA 8 cut(s) 192, 636, 852, 1008, 1062, 1242, 1266, 1358
SatI GCNGC 2 cut(s) 489, 1056
Sau3AI GATC 2 cut(s) 932, 1198
Sau96I GGNCC 2 cut(s) 275, 317
ScaI AGTACT 1 cut(s) 713
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 4 cut(s) 141, 142, 279, 956
SduI GDGCHC 1 cut(s) 531
SfaNI GCATC 5 cut(s) 406, 442, 464, 616, 1088
SinI GGWCC 1 cut(s) 317
SmaI CCCGGG 1 cut(s) 142
SmiMI CAYNNNNRTG 1 cut(s) 382
SmlI CTYRAG 4 cut(s) 508, 542, 653, 1380
SmoI CTYRAG 4 cut(s) 508, 542, 653, 1380
SnaBI TACGTA 1 cut(s) 1027
Sse9I AATT 6 cut(s) 703, 778, 849, 992, 1212, 1247
SsiI CCGC 4 cut(s) 351, 533, 1055, 1339
SspMI CTAG 4 cut(s) 86, 668, 1286, 1444
StyD4I CCNGG 4 cut(s) 139, 140, 277, 954
StyI CCWWGG 3 cut(s) 321, 1167, 1280
TaaI ACNGT 8 cut(s) 116, 152, 190, 269, 317, 802, 1081, 1261
TaiI ACGT 2 cut(s) 518, 1029
TaqI TCGA 5 cut(s) 98, 147, 1143, 1396, 1416
TasI AATT 6 cut(s) 703, 778, 849, 992, 1212, 1247
TatI WGTACW 1 cut(s) 711
TauI GCSGC 1 cut(s) 1058
TfiI GAWTC 4 cut(s) 569, 649, 686, 920
Tru1I TTAA 8 cut(s) 192, 636, 852, 1008, 1062, 1242, 1266, 1358
Tru9I TTAA 8 cut(s) 192, 636, 852, 1008, 1062, 1242, 1266, 1358
TscAI CASTG 4 cut(s) 129, 181, 274, 436
TseFI GTSAC 4 cut(s) 972, 998, 1129, 1370
TseI GCWGC 1 cut(s) 488
Tsp45I GTSAC 4 cut(s) 972, 998, 1129, 1370
TspDTI ATGAA 6 cut(s) 71, 208, 360, 762, 822, 1414
TspGWI ACGGA 1 cut(s) 1244
TspMI CCCGGG 1 cut(s) 140
TspRI CASTG 4 cut(s) 129, 181, 274, 436
Van91I CCANNNNNTGG 2 cut(s) 60, 877
VpaK11BI GGWCC 1 cut(s) 317
XapI RAATTY 2 cut(s) 703, 992
XceI RCATGY 1 cut(s) 1414
XcmI CCANNNNNNNNNTGG 1 cut(s) 891
XmaI CCCGGG 1 cut(s) 140
XmiI GTMKAC 1 cut(s) 182
XspI CTAG 4 cut(s) 86, 668, 1286, 1444
ZrmI AGTACT 1 cut(s) 713
Zsp2I ATGCAT 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.