DNA (cytosine-5)-methyltransferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 642 |
| AciI | CCGC | 3 cut(s) | 160, 556, 629 |
| AclWI | GGATC | 1 cut(s) | 89 |
| AcsI | RAATTY | 1 cut(s) | 295 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 256, 585 |
| AflII | CTTAAG | 1 cut(s) | 241 |
| AgsI | TTSAA | 3 cut(s) | 224, 340, 547 |
| AluBI | AGCT | 3 cut(s) | 34, 211, 407 |
| AluI | AGCT | 3 cut(s) | 34, 211, 407 |
| AlwI | GGATC | 1 cut(s) | 89 |
| AoxI | GGCC | 2 cut(s) | 17, 198 |
| ApoI | RAATTY | 1 cut(s) | 295 |
| AspS9I | GGNCC | 2 cut(s) | 199, 247 |
| AsuHPI | GGTGA | 2 cut(s) | 317, 515 |
| AvaII | GGWCC | 1 cut(s) | 247 |
| BanI | GGYRCC | 1 cut(s) | 642 |
| BanII | GRGCYC | 1 cut(s) | 751 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 658, 690 |
| BbsI | GAAGAC | 1 cut(s) | 666 |
| BccI | CCATC | 2 cut(s) | 647, 654 |
| BciVI | GTATCC | 1 cut(s) | 434 |
| BfaI | CTAG | 3 cut(s) | 60, 596, 775 |
| BfrI | CTTAAG | 1 cut(s) | 241 |
| BfuI | GTATCC | 1 cut(s) | 434 |
| BisI | GCNGC | 1 cut(s) | 160 |
| BlsI | GCNGC | 1 cut(s) | 161 |
| Bme18I | GGWCC | 1 cut(s) | 247 |
| BmgT120I | GGNCC | 2 cut(s) | 199, 247 |
| BmiI | GGNNCC | 4 cut(s) | 201, 248, 644, 748 |
| BmsI | GCATC | 1 cut(s) | 369 |
| BpiI | GAAGAC | 1 cut(s) | 666 |
| BpuEI | CTTGAG | 2 cut(s) | 227, 680 |
| Bsa29I | ATCGAT | 1 cut(s) | 346 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 256, 585 |
| BseCI | ATCGAT | 1 cut(s) | 346 |
| BseGI | GGATG | 2 cut(s) | 34, 658 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 256, 585 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BsgI | GTGCAG | 1 cut(s) | 417 |
| BshFI | GGCC | 2 cut(s) | 19, 200 |
| BshNI | GGYRCC | 1 cut(s) | 642 |
| BshVI | ATCGAT | 1 cut(s) | 346 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 256, 585 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| BsmI | GAATGC | 2 cut(s) | 161, 553 |
| BsnI | GGCC | 2 cut(s) | 19, 200 |
| Bsp1286I | GDGCHC | 1 cut(s) | 751 |
| Bsp143I | GATC | 3 cut(s) | 81, 343, 592 |
| BspACI | CCGC | 3 cut(s) | 160, 556, 629 |
| BspANI | GGCC | 2 cut(s) | 19, 200 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspDI | ATCGAT | 1 cut(s) | 346 |
| BspHI | TCATGA | 1 cut(s) | 84 |
| BspLI | GGNNCC | 4 cut(s) | 201, 248, 644, 748 |
| BspPI | GGATC | 1 cut(s) | 89 |
| BspQI | GCTCTTC | 1 cut(s) | 414 |
| BspT107I | GGYRCC | 1 cut(s) | 642 |
| BspTI | CTTAAG | 1 cut(s) | 241 |
| BssMI | GATC | 3 cut(s) | 81, 343, 592 |
| Bst4CI | ACNGT | 2 cut(s) | 274, 316 |
| Bst6I | CTCTTC | 1 cut(s) | 414 |
| BstAFI | CTTAAG | 1 cut(s) | 241 |
| BstDEI | CTNAG | 2 cut(s) | 75, 559 |
| BstF5I | GGATG | 2 cut(s) | 34, 658 |
| BstKTI | GATC | 3 cut(s) | 84, 346, 595 |
| BstMBI | GATC | 3 cut(s) | 81, 343, 592 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 404 |
| BstV2I | GAAGAC | 1 cut(s) | 666 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 653 |
| Bsu15I | ATCGAT | 1 cut(s) | 346 |
| BsuI | GTATCC | 1 cut(s) | 434 |
| BsuRI | GGCC | 2 cut(s) | 19, 200 |
| BsuTUI | ATCGAT | 1 cut(s) | 346 |
| BtsCI | GGATG | 2 cut(s) | 34, 658 |
| BtsIMutI | CAGTG | 2 cut(s) | 321, 453 |
| CciI | TCATGA | 1 cut(s) | 84 |
| Cfr13I | GGNCC | 2 cut(s) | 199, 247 |
| ClaI | ATCGAT | 1 cut(s) | 346 |
| CviAII | CATG | 1 cut(s) | 85 |
| CviJI | RGCY | 8 cut(s) | 19, 34, 92, 200, 211, 407, 658, 749 |
| CviKI_1 | RGCY | 8 cut(s) | 19, 34, 92, 200, 211, 407, 658, 749 |
| DdeI | CTNAG | 2 cut(s) | 75, 559 |
| DpnI | GATC | 3 cut(s) | 83, 345, 594 |
| DpnII | GATC | 3 cut(s) | 81, 343, 592 |
| Eam1104I | CTCTTC | 1 cut(s) | 414 |
| EarI | CTCTTC | 1 cut(s) | 414 |
| Eco24I | GRGCYC | 1 cut(s) | 751 |
| Eco32I | GATATC | 1 cut(s) | 456 |
| Eco47I | GGWCC | 1 cut(s) | 247 |
| EcoRV | GATATC | 1 cut(s) | 456 |
| EcoT38I | GRGCYC | 1 cut(s) | 751 |
| FaeI | CATG | 1 cut(s) | 88 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| FatI | CATG | 1 cut(s) | 84 |
| FauI | CCCGC | 1 cut(s) | 622 |
| Fnu4HI | GCNGC | 1 cut(s) | 160 |
| FokI | GGATG | 2 cut(s) | 41, 665 |
| FriOI | GRGCYC | 1 cut(s) | 751 |
| Fsp4HI | GCNGC | 1 cut(s) | 160 |
| FspBI | CTAG | 3 cut(s) | 60, 596, 775 |
| GluI | GCNGC | 1 cut(s) | 160 |
| HaeIII | GGCC | 2 cut(s) | 19, 200 |
| Hin1II | CATG | 1 cut(s) | 88 |
| HinfI | GANTC | 2 cut(s) | 169, 671 |
| HphI | GGTGA | 2 cut(s) | 317, 515 |
| Hpy188I | TCNGA | 1 cut(s) | 460 |
| Hpy188III | TCNNGA | 4 cut(s) | 85, 304, 427, 650 |
| Hpy99I | CGWCG | 1 cut(s) | 141 |
| HpyAV | CCTTC | 1 cut(s) | 82 |
| HpyCH4III | ACNGT | 2 cut(s) | 274, 316 |
| HpyCH4V | TGCA | 3 cut(s) | 65, 398, 538 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 404 |
| HpyF3I | CTNAG | 2 cut(s) | 75, 559 |
| Hsp92II | CATG | 1 cut(s) | 88 |
| Kzo9I | GATC | 3 cut(s) | 81, 343, 592 |
| LguI | GCTCTTC | 1 cut(s) | 414 |
| LmnI | GCTCC | 2 cut(s) | 493, 746 |
| LpnPI | CCDG | 7 cut(s) | 138, 253, 317, 341, 369, 518, 625 |
| LweI | GCATC | 1 cut(s) | 369 |
| MaeI | CTAG | 3 cut(s) | 60, 596, 775 |
| MaeIII | GTNAC | 2 cut(s) | 316, 617 |
| MalI | GATC | 3 cut(s) | 83, 345, 594 |
| MboI | GATC | 3 cut(s) | 81, 343, 592 |
| MboII | GAAGA | 4 cut(s) | 122, 401, 445, 666 |
| MhlI | GDGCHC | 1 cut(s) | 751 |
| MluCI | AATT | 3 cut(s) | 37, 69, 295 |
| MlyI | GAGTC | 1 cut(s) | 680 |
| MnlI | CCTC | 6 cut(s) | 3, 72, 380, 474, 503, 655 |
| MseI | TTAA | 3 cut(s) | 96, 242, 686 |
| MslI | CAYNNNNRTG | 1 cut(s) | 651 |
| MspCI | CTTAAG | 1 cut(s) | 241 |
| Mva1269I | GAATGC | 2 cut(s) | 161, 553 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 404 |
| NdeII | GATC | 3 cut(s) | 81, 343, 592 |
| NlaIII | CATG | 1 cut(s) | 88 |
| NlaIV | GGNNCC | 4 cut(s) | 201, 248, 644, 748 |
| NmuCI | GTSAC | 1 cut(s) | 316 |
| PagI | TCATGA | 1 cut(s) | 84 |
| PciSI | GCTCTTC | 1 cut(s) | 414 |
| PctI | GAATGC | 2 cut(s) | 161, 553 |
| PfeI | GAWTC | 1 cut(s) | 169 |
| PkrI | GCNGC | 1 cut(s) | 161 |
| PleI | GAGTC | 1 cut(s) | 679 |
| PpsI | GAGTC | 1 cut(s) | 679 |
| PspN4I | GGNNCC | 4 cut(s) | 201, 248, 644, 748 |
| PspPI | GGNCC | 2 cut(s) | 199, 247 |
| RseI | CAYNNNNRTG | 1 cut(s) | 651 |
| SapI | GCTCTTC | 1 cut(s) | 414 |
| SaqAI | TTAA | 3 cut(s) | 96, 242, 686 |
| SatI | GCNGC | 1 cut(s) | 160 |
| Sau3AI | GATC | 3 cut(s) | 81, 343, 592 |
| Sau96I | GGNCC | 2 cut(s) | 199, 247 |
| SchI | GAGTC | 1 cut(s) | 680 |
| SduI | GDGCHC | 1 cut(s) | 751 |
| SetI | ASST | 9 cut(s) | 14, 36, 127, 198, 213, 330, 409, 485, 528 |
| SfaNI | GCATC | 1 cut(s) | 369 |
| SinI | GGWCC | 1 cut(s) | 247 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 651 |
| SmlI | CTYRAG | 3 cut(s) | 206, 241, 659 |
| SmoI | CTYRAG | 3 cut(s) | 206, 241, 659 |
| Sse9I | AATT | 3 cut(s) | 37, 69, 295 |
| SsiI | CCGC | 3 cut(s) | 160, 556, 629 |
| SspMI | CTAG | 3 cut(s) | 60, 596, 775 |
| TaaI | ACNGT | 2 cut(s) | 274, 316 |
| TaqI | TCGA | 1 cut(s) | 346 |
| TasI | AATT | 3 cut(s) | 37, 69, 295 |
| TauI | GCSGC | 1 cut(s) | 162 |
| TfiI | GAWTC | 1 cut(s) | 169 |
| Tru1I | TTAA | 3 cut(s) | 96, 242, 686 |
| Tru9I | TTAA | 3 cut(s) | 96, 242, 686 |
| TscAI | CASTG | 2 cut(s) | 321, 453 |
| TseFI | GTSAC | 1 cut(s) | 316 |
| Tsp45I | GTSAC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 7 cut(s) | 101, 129, 168, 231, 288, 401, 446 |
| TspGWI | ACGGA | 1 cut(s) | 125 |
| TspRI | CASTG | 2 cut(s) | 321, 453 |
| Vha464I | CTTAAG | 1 cut(s) | 241 |
| VpaK11BI | GGWCC | 1 cut(s) | 247 |
| XapI | RAATTY | 1 cut(s) | 295 |
| XspI | CTAG | 3 cut(s) | 60, 596, 775 |