RLG00000030379

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000338
Physical Location & Seq
Forward (+)
60379155 .. 60390485
11331 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030379

Sequence Viewer

Length: 1467 bp
ATGGGCCAACAAGTCCTGCCCGTCTTCTACAAGGTGGATCCTTCTGATGTGCGGCACCAAAGGGGAAGGTTTGAGCTCAAAAGGGACCCCGAAGTAGAAGTGTCTCTGGTAACCATCGATCCTACATCTGAGGCGGAGACAAAACTTATGTCCCTGGTTAAAATGAGGTACAATGAATTGGAGGCTTCAATGGCAATAGAAAGATGCGTTATTGACTCGTCGCTTGTTGATTTGACTGATTTCATATCAGCTGCTCAAATTTCAAAGGCAGAAGGTGGCCATCTTCCCCTTGAAGAGATGTGTTCACATCTGCGAAGTGAGTATCCTGAGAAGAATAAAAGGAAACTTTGTGAATCTTCATTGCTGAAAAGGAAAAGGATTATGGGACATGGAAACCAGATCATAGGGGAAGATGCTGGTGCAGTTCATCTCCCAAATCCAATAAATGGGTTTGGGACTCCAGCTGATCTCTGTCAAATCCAGAGAAGTCTTCCAGAGGCAGCCACAGGACCTCCTTATTTTTACTATGAGAATGTGGCATTGACTCCTAAAGGAGTTTGGAGCACAATATCCCGCTTTTTGTATGACGTGAAGCCTGAGTTTGTTGGTTCGAAGTATTTTTGTGCTGCTGCAAGAAAGAGGGGTTATATGCACAATCTTCCAATCAAAAACAGAATTCCTCTCACTTGCATTGCTAGTGCAACAATTACTGAGAGGATCATGAAGGCTCTTAAAGACTATAACGAAGATGAAATCCCACCAGAAAGTATTGATACAGTGGCTTATCACCTGTCAGTTTTGAAAGATCGATTTCCCAATGGCATCAATGTCCTCTCTCTCTCCTATGGGATTGGTGGTGCAGAGACAAACCAGAGAGGGAACTTGTATCACCTTGCTGATGTGCAAAAGTTGAATGCTGACCGCTTAGAGCATTATATCAGTTCCTTTGGGGGGTTTGATCTGGTGATTGGTGGCAGTCCATGTAACAATCTTGCGGGTGGCAACAGACACCATCGGGATGGGCTTGAGGACTCTCTCTCTCTCCCCCTCTCCCTCCCTCCCATCAGCGCCGTCGTCGAGGCCCAATCCAAGGTCACCGAAATCGCGCCGTCGTCGACACTCAAATCGGTCCGGCATCGAGGCTCTCAATCCGTCGTCGTGCAGCACAGTTTCGACTCAGACAGAGACTCCAGCGCAGTCCTCGAGGCACAAATCGGTCCGGCATCGAAGCCCAAACGAAGAATCTGTACCCCAAGTTGTCGGCGTCGCCGCACAGGTTCAACACTTGCTCGGTTAAGCCGAAGCGTAAAACAATACCGGATTGATGTAGAGCGAGCTCTAGTTTGGGGACACAGGAGTGGAATTTCCGTAATATTCTGTATATCTTCTCAACGTCGGCGGCGAACTCGCAGTGGGTCTGGTTGTCTGGGGTCGGTTCCGGGTCAGTTCCGAGGTGCCGAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

489

Amino Acids

54.05

Weight (kDa)

9.13

Isoelectric Point (pI)

52.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1202
AccB1I GGYRCC 2 cut(s) 54, 1454
AccB7I CCANNNNNTGG 1 cut(s) 446
AccI GTMKAC 1 cut(s) 1115
AccII CGCG 1 cut(s) 1106
AciI CCGC 7 cut(s) 52, 134, 574, 922, 995, 1270, 1399
AclWI GGATC 4 cut(s) 32, 45, 113, 725
AcoI YGGCCR 1 cut(s) 277
AcsI RAATTY 3 cut(s) 258, 675, 1362
AcyI GRCGYC 1 cut(s) 1264
AfaI GTAC 2 cut(s) 170, 1249
AfiI CCNNNNNNNGG 3 cut(s) 446, 951, 1090
AgsI TTSAA 6 cut(s) 189, 264, 293, 802, 913, 1281
AjiI CACGTC 1 cut(s) 589
AjnI CCWGG 1 cut(s) 153
AleI CACNNNNGTG 1 cut(s) 1356
AluBI AGCT 4 cut(s) 76, 251, 464, 1337
AluI AGCT 4 cut(s) 76, 251, 464, 1337
Alw21I GWGCWC 3 cut(s) 78, 566, 1339
Alw26I GTCTC 4 cut(s) 108, 131, 857, 1179
AlwI GGATC 4 cut(s) 32, 45, 113, 725
Ama87I CYCGRG 1 cut(s) 1202
AoxI GGCC 3 cut(s) 4, 277, 1080
ApeKI GCWGC 5 cut(s) 251, 500, 626, 629, 1162
ApoI RAATTY 3 cut(s) 258, 675, 1362
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
AspLEI GCGC 3 cut(s) 1070, 1108, 1196
AspS9I GGNCC 6 cut(s) 4, 85, 509, 1081, 1129, 1217
AsuC2I CCSGG 1 cut(s) 1440
AsuHPI GGTGA 4 cut(s) 779, 881, 976, 1087
AsuII TTCGAA 1 cut(s) 611
AvaI CYCGRG 1 cut(s) 1202
AvaII GGWCC 4 cut(s) 85, 509, 1129, 1217
BalI TGGCCA 1 cut(s) 279
BamHI GGATCC 1 cut(s) 37
BanI GGYRCC 2 cut(s) 54, 1454
BanII GRGCYC 2 cut(s) 78, 1339
BarI GAAGNNNNNNTAC 2 cut(s) 1231, 1263
BbsI GAAGAC 2 cut(s) 16, 482
Bbv12I GWGCWC 3 cut(s) 78, 566, 1339
BbvI GCAGC 5 cut(s) 238, 512, 613, 616, 1174
BccI CCATC 5 cut(s) 122, 288, 1013, 1020, 1070
BceAI ACGGC 2 cut(s) 1055, 1093
BciT130I CCWGG 1 cut(s) 155
BciVI GTATCC 1 cut(s) 333
BcnI CCSGG 1 cut(s) 1440
BcoDI GTCTC 4 cut(s) 108, 131, 857, 1179
BfaI CTAG 2 cut(s) 696, 1340
BfoI RGCGCY 1 cut(s) 1071
BfuI GTATCC 1 cut(s) 333
BisI GCNGC 8 cut(s) 53, 252, 501, 627, 630, 1163, 1270, 1400
BlsI GCNGC 8 cut(s) 54, 253, 502, 628, 631, 1164, 1271, 1401
Bme1390I CCNGG 2 cut(s) 155, 1440
Bme18I GGWCC 4 cut(s) 85, 509, 1129, 1217
BmeT110I CYCGRG 1 cut(s) 1202
BmgBI CACGTC 1 cut(s) 589
BmgT120I GGNCC 6 cut(s) 4, 85, 509, 1081, 1129, 1217
BmiI GGNNCC 6 cut(s) 39, 56, 86, 87, 1437, 1456
BmrFI CCNGG 2 cut(s) 155, 1440
BmsI GCATC 5 cut(s) 194, 403, 831, 1144, 1232
BpiI GAAGAC 2 cut(s) 16, 482
BpmI CTGGAG 2 cut(s) 444, 1174
Bpu14I TTCGAA 1 cut(s) 611
BpuEI CTTGAG 1 cut(s) 1046
BpuMI CCSGG 1 cut(s) 1440
Bsa29I ATCGAT 2 cut(s) 117, 808
BsaHI GRCGYC 1 cut(s) 1264
BsaJI CCNNGG 3 cut(s) 153, 1089, 1450
BsaWI WCCGGW 1 cut(s) 1317
BsaXI ACNNNNNCTCC 4 cut(s) 496, 526, 1172, 1202
Bsc4I CCNNNNNNNGG 3 cut(s) 446, 951, 1090
Bse3DI GCAATG 2 cut(s) 359, 690
BseBI CCWGG 1 cut(s) 155
BseCI ATCGAT 2 cut(s) 117, 808
BseDI CCNNGG 3 cut(s) 153, 1089, 1450
BseGI GGATG 1 cut(s) 1024
BseLI CCNNNNNNNGG 3 cut(s) 446, 951, 1090
BseMI GCAATG 2 cut(s) 359, 690
BseMII CTCAG 5 cut(s) 120, 318, 588, 702, 1191
BseXI GCAGC 5 cut(s) 238, 512, 613, 616, 1174
BsgI GTGCAG 3 cut(s) 441, 879, 1181
Bsh1236I CGCG 1 cut(s) 1106
BshFI GGCC 3 cut(s) 6, 279, 1082
BshNI GGYRCC 2 cut(s) 54, 1454
BshVI ATCGAT 2 cut(s) 117, 808
BsiHKAI GWGCWC 3 cut(s) 78, 566, 1339
BsiHKCI CYCGRG 1 cut(s) 1202
BsiSI CCGG 4 cut(s) 1132, 1220, 1318, 1439
BslFI GGGAC 5 cut(s) 98, 136, 399, 469, 1362
BslI CCNNNNNNNGG 3 cut(s) 446, 951, 1090
BsmAI GTCTC 4 cut(s) 108, 131, 857, 1179
BsmFI GGGAC 5 cut(s) 98, 136, 399, 469, 1362
BsmI GAATGC 1 cut(s) 919
BsnI GGCC 3 cut(s) 6, 279, 1082
BsoBI CYCGRG 1 cut(s) 1202
Bsp119I TTCGAA 1 cut(s) 611
Bsp1286I GDGCHC 3 cut(s) 78, 566, 1339
Bsp143I GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
BspACI CCGC 7 cut(s) 52, 134, 574, 922, 995, 1270, 1399
BspANI GGCC 3 cut(s) 6, 279, 1082
BspCNI CTCAG 5 cut(s) 121, 319, 589, 703, 1190
BspDI ATCGAT 2 cut(s) 117, 808
BspFNI CGCG 1 cut(s) 1106
BspHI TCATGA 1 cut(s) 720
BspLI GGNNCC 6 cut(s) 39, 56, 86, 87, 1437, 1456
BspPI GGATC 4 cut(s) 32, 45, 113, 725
BspT104I TTCGAA 1 cut(s) 611
BspT107I GGYRCC 2 cut(s) 54, 1454
BsrDI GCAATG 2 cut(s) 359, 690
BssECI CCNNGG 3 cut(s) 153, 1089, 1450
BssMI GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
BssNI GRCGYC 1 cut(s) 1264
BssT1I CCWWGG 1 cut(s) 1089
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 2 cut(s) 778, 1169
Bst6I CTCTTC 1 cut(s) 288
BstACI GRCGYC 1 cut(s) 1264
BstBI TTCGAA 1 cut(s) 611
BstC8I GCNNGC 1 cut(s) 1335
BstDEI CTNAG 6 cut(s) 129, 327, 597, 711, 925, 1177
BstEII GGTNACC 2 cut(s) 109, 1093
BstF5I GGATG 1 cut(s) 1024
BstFNI CGCG 1 cut(s) 1106
BstH2I RGCGCY 1 cut(s) 1071
BstHHI GCGC 3 cut(s) 1070, 1108, 1196
BstKTI GATC 7 cut(s) 40, 121, 402, 469, 720, 808, 961
BstMAI GTCTC 4 cut(s) 108, 131, 857, 1179
BstMBI GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
BstMWI GCNNNNNNNGC 1 cut(s) 191
BstNI CCWGG 1 cut(s) 155
BstPI GGTNACC 2 cut(s) 109, 1093
BstSCI CCNGG 2 cut(s) 153, 1438
BstUI CGCG 1 cut(s) 1106
BstV1I GCAGC 5 cut(s) 238, 512, 613, 616, 1174
BstV2I GAAGAC 2 cut(s) 16, 482
BstX2I RGATCY 1 cut(s) 37
BstXI CCANNNNNNTGG 1 cut(s) 1019
BstYI RGATCY 1 cut(s) 37
Bsu15I ATCGAT 2 cut(s) 117, 808
BsuI GTATCC 1 cut(s) 333
BsuRI GGCC 3 cut(s) 6, 279, 1082
BsuTUI ATCGAT 2 cut(s) 117, 808
BtrI CACGTC 1 cut(s) 589
BtsCI GGATG 1 cut(s) 1024
BtsI GCAGTG 1 cut(s) 1417
BtsIMutI CAGTG 2 cut(s) 783, 1417
Cac8I GCNNGC 1 cut(s) 1335
CciI TCATGA 1 cut(s) 720
CfoI GCGC 3 cut(s) 1070, 1108, 1196
Cfr13I GGNCC 6 cut(s) 4, 85, 509, 1081, 1129, 1217
ClaI ATCGAT 2 cut(s) 117, 808
CpoI CGGWCCG 2 cut(s) 1129, 1217
CseI GACGC 1 cut(s) 1253
Csp6I GTAC 2 cut(s) 169, 1248
CspI CGGWCCG 2 cut(s) 1129, 1217
CviAII CATG 3 cut(s) 389, 721, 981
CviQI GTAC 2 cut(s) 169, 1248
DdeI CTNAG 6 cut(s) 129, 327, 597, 711, 925, 1177
DpnI GATC 7 cut(s) 39, 120, 401, 468, 719, 807, 960
DpnII GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
EaeI YGGCCR 1 cut(s) 277
Eam1104I CTCTTC 1 cut(s) 288
EarI CTCTTC 1 cut(s) 288
EciI GGCGGA 1 cut(s) 149
Ecl136II GAGCTC 2 cut(s) 76, 1337
Eco130I CCWWGG 1 cut(s) 1089
Eco24I GRGCYC 2 cut(s) 78, 1339
Eco47I GGWCC 4 cut(s) 85, 509, 1129, 1217
Eco53kI GAGCTC 2 cut(s) 76, 1337
Eco88I CYCGRG 1 cut(s) 1202
Eco91I GGTNACC 2 cut(s) 109, 1093
EcoICRI GAGCTC 2 cut(s) 76, 1337
EcoO109I RGGNCCY 2 cut(s) 85, 509
EcoO65I GGTNACC 2 cut(s) 109, 1093
EcoRI GAATTC 1 cut(s) 675
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 1 cut(s) 1089
EcoT38I GRGCYC 2 cut(s) 78, 1339
ErhI CCWWGG 1 cut(s) 1089
FaeI CATG 3 cut(s) 392, 724, 984
FaqI GGGAC 5 cut(s) 98, 136, 399, 469, 1362
FatI CATG 3 cut(s) 388, 720, 980
FauI CCCGC 2 cut(s) 581, 988
FblI GTMKAC 1 cut(s) 1115
Fnu4HI GCNGC 8 cut(s) 53, 252, 501, 627, 630, 1163, 1270, 1400
FokI GGATG 1 cut(s) 1031
FriOI GRGCYC 2 cut(s) 78, 1339
Fsp4HI GCNGC 8 cut(s) 53, 252, 501, 627, 630, 1163, 1270, 1400
FspBI CTAG 2 cut(s) 696, 1340
GlaI GCGC 3 cut(s) 1069, 1107, 1195
GluI GCNGC 8 cut(s) 53, 252, 501, 627, 630, 1163, 1270, 1400
GsuI CTGGAG 2 cut(s) 444, 1174
HaeII RGCGCY 1 cut(s) 1071
HaeIII GGCC 3 cut(s) 6, 279, 1082
HapII CCGG 4 cut(s) 1132, 1220, 1318, 1439
HgaI GACGC 1 cut(s) 1253
HhaI GCGC 3 cut(s) 1070, 1108, 1196
Hin1I GRCGYC 1 cut(s) 1264
Hin1II CATG 3 cut(s) 392, 724, 984
Hin6I GCGC 3 cut(s) 1068, 1106, 1194
HinP1I GCGC 3 cut(s) 1068, 1106, 1194
HincII GTYRAC 1 cut(s) 1116
HindII GTYRAC 1 cut(s) 1116
HinfI GANTC 8 cut(s) 215, 353, 457, 544, 1031, 1175, 1187, 1242
HpaII CCGG 4 cut(s) 1132, 1220, 1318, 1439
HphI GGTGA 4 cut(s) 779, 881, 976, 1087
Hpy166II GTNNAC 2 cut(s) 305, 1116
Hpy188I TCNGA 4 cut(s) 46, 130, 1180, 1451
Hpy188III TCNNGA 5 cut(s) 326, 481, 494, 721, 1016
Hpy8I GTNNAC 2 cut(s) 305, 1116
Hpy99I CGWCG 9 cut(s) 223, 1076, 1079, 1114, 1117, 1157, 1160, 1269, 1398
HpyAV CCTTC 4 cut(s) 51, 60, 266, 718
HpyCH4III ACNGT 2 cut(s) 778, 1169
HpyCH4IV ACGT 2 cut(s) 588, 1393
HpyCH4V TGCA 8 cut(s) 422, 632, 652, 690, 701, 860, 904, 1162
HpyF10VI GCNNNNNNNGC 1 cut(s) 191
HpyF3I CTNAG 6 cut(s) 129, 327, 597, 711, 925, 1177
HpySE526I ACGT 2 cut(s) 588, 1393
Hsp92I GRCGYC 1 cut(s) 1264
Hsp92II CATG 3 cut(s) 392, 724, 984
HspAI GCGC 3 cut(s) 1068, 1106, 1194
KflI GGGWCCC 1 cut(s) 85
Kzo9I GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
LmnI GCTCC 1 cut(s) 561
Lsp1109I GCAGC 5 cut(s) 238, 512, 613, 616, 1174
LweI GCATC 5 cut(s) 194, 403, 831, 1144, 1232
MaeI CTAG 2 cut(s) 696, 1340
MaeII ACGT 2 cut(s) 588, 1393
MaeIII GTNAC 3 cut(s) 109, 983, 1093
MalI GATC 7 cut(s) 39, 120, 401, 468, 719, 807, 960
MboI GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
MflI RGATCY 1 cut(s) 37
MhlI GDGCHC 3 cut(s) 78, 566, 1339
MlsI TGGCCA 1 cut(s) 279
MluCI AATT 5 cut(s) 176, 258, 675, 705, 1362
MluNI TGGCCA 1 cut(s) 279
MlyI GAGTC 6 cut(s) 209, 451, 538, 1025, 1169, 1181
Mox20I TGGCCA 1 cut(s) 279
MscI TGGCCA 1 cut(s) 279
MseI TTAA 3 cut(s) 159, 732, 1295
MslI CAYNNNNRTG 2 cut(s) 1017, 1356
Msp20I TGGCCA 1 cut(s) 279
MspA1I CMGCKG 2 cut(s) 251, 464
MspI CCGG 4 cut(s) 1132, 1220, 1318, 1439
MspR9I CCNGG 2 cut(s) 155, 1440
Mva1269I GAATGC 1 cut(s) 919
MvaI CCWGG 1 cut(s) 155
MvnI CGCG 1 cut(s) 1106
MwoI GCNNNNNNNGC 1 cut(s) 191
NciI CCSGG 1 cut(s) 1440
NdeII GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
NlaIII CATG 3 cut(s) 392, 724, 984
NlaIV GGNNCC 6 cut(s) 39, 56, 86, 87, 1437, 1456
NmuCI GTSAC 1 cut(s) 1093
NspV TTCGAA 1 cut(s) 611
OliI CACNNNNGTG 1 cut(s) 1356
PaeR7I CTCGAG 1 cut(s) 1202
PagI TCATGA 1 cut(s) 720
PcsI WCGNNNNNNNCGW 2 cut(s) 1297, 1399
PctI GAATGC 1 cut(s) 919
PfeI GAWTC 2 cut(s) 353, 1242
PflMI CCANNNNNTGG 1 cut(s) 446
PkrI GCNGC 8 cut(s) 54, 253, 502, 628, 631, 1164, 1271, 1401
PleI GAGTC 6 cut(s) 209, 451, 538, 1025, 1169, 1181
PpsI GAGTC 6 cut(s) 209, 451, 538, 1025, 1169, 1181
PpuMI RGGWCCY 2 cut(s) 85, 509
Psp124BI GAGCTC 2 cut(s) 78, 1339
Psp5II RGGWCCY 2 cut(s) 85, 509
Psp6I CCWGG 1 cut(s) 153
PspEI GGTNACC 2 cut(s) 109, 1093
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 6 cut(s) 39, 56, 86, 87, 1437, 1456
PspPI GGNCC 6 cut(s) 4, 85, 509, 1081, 1129, 1217
PspPPI RGGWCCY 2 cut(s) 85, 509
PspXI VCTCGAGB 1 cut(s) 1202
PsuI RGATCY 1 cut(s) 37
PvuII CAGCTG 2 cut(s) 251, 464
RsaI GTAC 2 cut(s) 170, 1249
RsaNI GTAC 2 cut(s) 169, 1248
RseI CAYNNNNRTG 2 cut(s) 1017, 1356
Rsr2I CGGWCCG 2 cut(s) 1129, 1217
RsrII CGGWCCG 2 cut(s) 1129, 1217
SacI GAGCTC 2 cut(s) 78, 1339
SalI GTCGAC 1 cut(s) 1114
SaqAI TTAA 3 cut(s) 159, 732, 1295
SatI GCNGC 8 cut(s) 53, 252, 501, 627, 630, 1163, 1270, 1400
Sau3AI GATC 7 cut(s) 37, 118, 399, 466, 717, 805, 958
Sau96I GGNCC 6 cut(s) 4, 85, 509, 1081, 1129, 1217
SchI GAGTC 6 cut(s) 209, 451, 538, 1025, 1169, 1181
ScrFI CCNGG 2 cut(s) 155, 1440
SduI GDGCHC 3 cut(s) 78, 566, 1339
SfaNI GCATC 5 cut(s) 194, 403, 831, 1144, 1232
Sfr274I CTCGAG 1 cut(s) 1202
SfuI TTCGAA 1 cut(s) 611
SinI GGWCC 4 cut(s) 85, 509, 1129, 1217
SlaI CTCGAG 1 cut(s) 1202
SmiMI CAYNNNNRTG 2 cut(s) 1017, 1356
SmlI CTYRAG 2 cut(s) 1025, 1202
SmoI CTYRAG 2 cut(s) 1025, 1202
Sse9I AATT 5 cut(s) 176, 258, 675, 705, 1362
SsiI CCGC 7 cut(s) 52, 134, 574, 922, 995, 1270, 1399
SspI AATATT 1 cut(s) 1374
SspMI CTAG 2 cut(s) 696, 1340
SstI GAGCTC 2 cut(s) 78, 1339
StyD4I CCNGG 2 cut(s) 153, 1438
StyI CCWWGG 1 cut(s) 1089
TaaI ACNGT 2 cut(s) 778, 1169
TaiI ACGT 2 cut(s) 591, 1396
TaqI TCGA 9 cut(s) 117, 611, 808, 1077, 1115, 1138, 1173, 1203, 1226
TaqII GACCGA 2 cut(s) 1117, 1205
TasI AATT 5 cut(s) 176, 258, 675, 705, 1362
TauI GCSGC 3 cut(s) 55, 1272, 1402
TfiI GAWTC 2 cut(s) 353, 1242
Tru1I TTAA 3 cut(s) 159, 732, 1295
Tru9I TTAA 3 cut(s) 159, 732, 1295
TscAI CASTG 2 cut(s) 783, 1417
TseFI GTSAC 1 cut(s) 1093
TseI GCWGC 5 cut(s) 251, 500, 626, 629, 1162
Tsp45I GTSAC 1 cut(s) 1093
TspDTI ATGAA 6 cut(s) 189, 232, 348, 416, 737, 765
TspGWI ACGGA 2 cut(s) 1141, 1357
TspRI CASTG 2 cut(s) 783, 1417
Van91I CCANNNNNTGG 1 cut(s) 446
VpaK11BI GGWCC 4 cut(s) 85, 509, 1129, 1217
XapI RAATTY 3 cut(s) 258, 675, 1362
XhoI CTCGAG 1 cut(s) 1202
XmiI GTMKAC 1 cut(s) 1115
XspI CTAG 2 cut(s) 696, 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.