Rorug02G0333500

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000338
Physical Location & Seq
Reverse (-)
41318675 .. 41319792
1118 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0333500.1

Sequence Viewer

Length: 768 bp
ATGTCTTCTTCCTCTAACACAGATCTGATCATGCGCCTTCTCGACGAAAACCATGATCCTCCGACGTTTTTCCCTCCTCATAAAGACCTGTATGACTTGAACAGCAAGATCATGCTCATCGCCATCATTGCATTATCCGTCGTGGTTGTGCTGGTAGTACTCCTTCACACCTACGCAAGATGCGTCCTCAGACGCCAGTCTCTTCAGCGAGCTGCCGCCTTACGCCGCCTGGGTTCGACTGTGGCCCATGTCCACTCTTCCGCCGAGCCACCCAAGACAGGCCTCGAGCCCTCCGTCATCGCCGCCTTGCCCGTCTTCTTATACAAGCGCGTGGAGGGTGAGGGACGTCATGAGGCCGATGCTGACGTCGAGTGTGCCGTGTGTCTGAGCATGTTGGAGGATGAAGAAATGGCGAGGTTGCTTCCCAATTGTAAGCACAGCTTCCATGCACAATGCATAGACACGTGGCTGAATTCTCACACCACTTGCCCTATCTGCCGGACGGAGGCGGAGCCCCGTATGGCTCTCCAGCCGGAGCAACGGGAGGGTCCTGTGGCCGGCGCAGCAGCCACGGCTCCACCGTTGGAGCGGGTGAACTCCGTCTTGTCATGTGCGGAAGGGACATCGGAAGACGGTAAAGCAATAAATAGTGGTTCCATTTCGAGGCTGAGTAGTTCTTTCAGAAGAATGCTTAGTAGAGAAAGATCTTCCAGAAGGGTTCAATCATATGGTCAAGAAGATGGTTTTGAAGATTTAGAGAGACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

255

Amino Acids

28.18

Weight (kDa)

6.0

Isoelectric Point (pI)

62.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 124 - 167 3e-13 Ring finger domain
zf-rbx1 PF12678 124 - 167 3.3e-10 RING-H2 zinc finger domain
zf-C3HC4_2 PF13923 124 - 166 3.4e-10 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 124 - 153 8.5e-10 RING-like zinc finger
zf-RING_5 PF14634 124 - 168 6e-06 zinc-RING finger domain
zf-C3HC4 PF00097 125 - 166 1.5e-07 Zinc finger, C3HC4 type (RING finger)
zf-ANAPC11 PF12861 138 - 169 3e-06 Anaphase-promoting complex subunit 11 RING-H2 finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 349, 369
AccBSI CCGCTC 1 cut(s) 589
AccII CGCG 1 cut(s) 330
AciI CCGC 7 cut(s) 216, 226, 261, 303, 509, 589, 614
AclWI GGATC 1 cut(s) 50
AcoI YGGCCR 1 cut(s) 555
AcsI RAATTY 1 cut(s) 472
AcuI CTGAAG 1 cut(s) 188
AcvI CACGTG 1 cut(s) 465
AcyI GRCGYC 3 cut(s) 193, 346, 366
AfaI GTAC 1 cut(s) 159
AfiI CCNNNNNNNGG 4 cut(s) 278, 505, 557, 663
AflIII ACRYGT 1 cut(s) 462
AgsI TTSAA 3 cut(s) 100, 722, 749
AjnI CCWGG 1 cut(s) 228
AluBI AGCT 2 cut(s) 212, 441
AluI AGCT 2 cut(s) 212, 441
Alw26I GTCTC 2 cut(s) 204, 754
AlwI GGATC 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 284
AoxI GGCC 4 cut(s) 243, 280, 354, 555
ApeKI GCWGC 3 cut(s) 212, 563, 566
ApoI RAATTY 1 cut(s) 472
AspLEI GCGC 3 cut(s) 36, 330, 563
AspS9I GGNCC 2 cut(s) 244, 548
AsuHPI GGTGA 2 cut(s) 350, 604
AvaI CYCGRG 1 cut(s) 284
AvaII GGWCC 1 cut(s) 548
BanII GRGCYC 2 cut(s) 291, 516
BarI GAAGNNNNNNTAC 2 cut(s) 147, 179
BbrPI CACGTG 1 cut(s) 465
BbsI GAAGAC 2 cut(s) 307, 636
BbvI GCAGC 3 cut(s) 199, 575, 578
BccI CCATC 2 cut(s) 131, 734
BceAI ACGGC 2 cut(s) 362, 588
BciT130I CCWGG 1 cut(s) 230
BclI TGATCA 1 cut(s) 27
BcoDI GTCTC 2 cut(s) 204, 754
BglII AGATCT 2 cut(s) 22, 704
BisI GCNGC 6 cut(s) 213, 216, 226, 303, 564, 567
BlsI GCNGC 6 cut(s) 214, 217, 227, 304, 565, 568
BmcAI AGTACT 1 cut(s) 159
Bme1390I CCNGG 1 cut(s) 230
Bme18I GGWCC 1 cut(s) 548
BmeT110I CYCGRG 1 cut(s) 284
BmgT120I GGNCC 2 cut(s) 244, 548
BmiI GGNNCC 4 cut(s) 513, 549, 576, 655
BmrFI CCNGG 1 cut(s) 230
BmsI GCATC 2 cut(s) 170, 349
BoxI GACNNNNGTC 1 cut(s) 196
BpiI GAAGAC 2 cut(s) 307, 636
BpmI CTGGAG 1 cut(s) 512
BsaAI YACGTR 1 cut(s) 465
BsaHI GRCGYC 3 cut(s) 193, 346, 366
BsaJI CCNNGG 2 cut(s) 229, 570
Bsc4I CCNNNNNNNGG 4 cut(s) 278, 505, 557, 663
Bse118I RCCGGY 1 cut(s) 557
Bse1I ACTGG 1 cut(s) 196
Bse3DI GCAATG 1 cut(s) 126
BseBI CCWGG 1 cut(s) 230
BseDI CCNNGG 2 cut(s) 229, 570
BseGI GGATG 1 cut(s) 406
BseLI CCNNNNNNNGG 4 cut(s) 278, 505, 557, 663
BseMI GCAATG 1 cut(s) 126
BseMII CTCAG 3 cut(s) 202, 377, 659
BseNI ACTGG 1 cut(s) 196
BseRI GAGGAG 1 cut(s) 66
BseXI GCAGC 3 cut(s) 199, 575, 578
Bsh1236I CGCG 1 cut(s) 330
BshFI GGCC 4 cut(s) 245, 282, 356, 557
BsiHKCI CYCGRG 1 cut(s) 284
BsiSI CCGG 3 cut(s) 499, 533, 558
BslFI GGGAC 2 cut(s) 357, 634
BslI CCNNNNNNNGG 4 cut(s) 278, 505, 557, 663
BsmAI GTCTC 2 cut(s) 204, 754
BsmFI GGGAC 2 cut(s) 357, 634
BsmI GAATGC 1 cut(s) 693
BsnI GGCC 4 cut(s) 245, 282, 356, 557
BsoBI CYCGRG 1 cut(s) 284
Bsp1286I GDGCHC 2 cut(s) 291, 516
Bsp143I GATC 5 cut(s) 22, 27, 55, 108, 704
BspACI CCGC 7 cut(s) 216, 226, 261, 303, 509, 589, 614
BspANI GGCC 4 cut(s) 245, 282, 356, 557
BspCNI CTCAG 3 cut(s) 201, 378, 660
BspFNI CGCG 1 cut(s) 330
BspHI TCATGA 1 cut(s) 349
BspLI GGNNCC 4 cut(s) 513, 549, 576, 655
BspPI GGATC 1 cut(s) 50
BsrBI CCGCTC 1 cut(s) 589
BsrDI GCAATG 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 557
BsrI ACTGG 1 cut(s) 196
BssAI RCCGGY 1 cut(s) 557
BssECI CCNNGG 2 cut(s) 229, 570
BssMI GATC 5 cut(s) 22, 27, 55, 108, 704
BssNI GRCGYC 3 cut(s) 193, 346, 366
Bst2UI CCWGG 1 cut(s) 230
Bst4CI ACNGT 4 cut(s) 241, 582, 635, 765
Bst6I CTCTTC 2 cut(s) 207, 262
BstACI GRCGYC 3 cut(s) 193, 346, 366
BstBAI YACGTR 1 cut(s) 465
BstC8I GCNNGC 2 cut(s) 210, 559
BstDEI CTNAG 4 cut(s) 188, 386, 668, 692
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 1 cut(s) 406
BstFNI CGCG 1 cut(s) 330
BstHHI GCGC 3 cut(s) 36, 330, 563
BstKTI GATC 5 cut(s) 25, 30, 58, 111, 707
BstMAI GTCTC 2 cut(s) 204, 754
BstMBI GATC 5 cut(s) 22, 27, 55, 108, 704
BstMWI GCNNNNNNNGC 4 cut(s) 128, 495, 563, 572
BstNI CCWGG 1 cut(s) 230
BstNSI RCATGY 1 cut(s) 394
BstPAI GACNNNNGTC 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 228
BstUI CGCG 1 cut(s) 330
BstV1I GCAGC 3 cut(s) 199, 575, 578
BstV2I GAAGAC 2 cut(s) 307, 636
BstX2I RGATCY 2 cut(s) 22, 704
BstYI RGATCY 2 cut(s) 22, 704
BsuRI GGCC 4 cut(s) 245, 282, 356, 557
BtgI CCRYGG 1 cut(s) 570
BtgZI GCGATG 2 cut(s) 103, 283
BtsCI GGATG 1 cut(s) 406
Cac8I GCNNGC 2 cut(s) 210, 559
CciI TCATGA 1 cut(s) 349
CfoI GCGC 3 cut(s) 36, 330, 563
Cfr10I RCCGGY 1 cut(s) 557
Cfr13I GGNCC 2 cut(s) 244, 548
CseI GACGC 2 cut(s) 172, 201
Csp6I GTAC 1 cut(s) 158
CviAII CATG 8 cut(s) 31, 53, 112, 248, 350, 391, 446, 609
CviQI GTAC 1 cut(s) 158
DdeI CTNAG 4 cut(s) 188, 386, 668, 692
DpnI GATC 5 cut(s) 24, 29, 57, 110, 706
DpnII GATC 5 cut(s) 22, 27, 55, 108, 704
EaeI YGGCCR 1 cut(s) 555
Eam1104I CTCTTC 2 cut(s) 207, 262
EarI CTCTTC 2 cut(s) 207, 262
EciI GGCGGA 2 cut(s) 250, 524
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 2 cut(s) 291, 516
Eco47I GGWCC 1 cut(s) 548
Eco57I CTGAAG 1 cut(s) 188
Eco72I CACGTG 1 cut(s) 465
Eco88I CYCGRG 1 cut(s) 284
EcoO109I RGGNCCY 1 cut(s) 548
EcoRI GAATTC 1 cut(s) 472
EcoRII CCWGG 1 cut(s) 228
EcoT22I ATGCAT 1 cut(s) 458
EcoT38I GRGCYC 2 cut(s) 291, 516
FaeI CATG 8 cut(s) 34, 56, 115, 251, 353, 394, 449, 612
FalI AAGNNNNNCTT 2 cut(s) 425, 457
FaqI GGGAC 2 cut(s) 357, 634
FatI CATG 8 cut(s) 30, 52, 111, 247, 349, 390, 445, 608
FauI CCCGC 1 cut(s) 582
FauNDI CATATG 1 cut(s) 727
FbaI TGATCA 1 cut(s) 27
Fnu4HI GCNGC 6 cut(s) 213, 216, 226, 303, 564, 567
FokI GGATG 1 cut(s) 413
FriOI GRGCYC 2 cut(s) 291, 516
Fsp4HI GCNGC 6 cut(s) 213, 216, 226, 303, 564, 567
GlaI GCGC 3 cut(s) 35, 329, 562
GluI GCNGC 6 cut(s) 213, 216, 226, 303, 564, 567
GsuI CTGGAG 1 cut(s) 512
HaeIII GGCC 4 cut(s) 245, 282, 356, 557
HapII CCGG 3 cut(s) 499, 533, 558
HgaI GACGC 2 cut(s) 172, 201
HhaI GCGC 3 cut(s) 36, 330, 563
Hin1I GRCGYC 3 cut(s) 193, 346, 366
Hin1II CATG 8 cut(s) 34, 56, 115, 251, 353, 394, 449, 612
Hin6I GCGC 3 cut(s) 34, 328, 561
HinP1I GCGC 3 cut(s) 34, 328, 561
HpaII CCGG 3 cut(s) 499, 533, 558
HphI GGTGA 2 cut(s) 350, 604
Hpy166II GTNNAC 2 cut(s) 253, 595
Hpy188I TCNGA 6 cut(s) 27, 63, 191, 387, 628, 683
Hpy188III TCNNGA 4 cut(s) 41, 350, 711, 734
Hpy8I GTNNAC 2 cut(s) 253, 595
Hpy99I CGWCG 4 cut(s) 47, 67, 143, 371
HpyAV CCTTC 4 cut(s) 47, 173, 611, 708
HpyCH4III ACNGT 4 cut(s) 241, 582, 635, 765
HpyCH4IV ACGT 4 cut(s) 65, 346, 366, 464
HpyCH4V TGCA 3 cut(s) 131, 449, 456
HpyF10VI GCNNNNNNNGC 4 cut(s) 128, 495, 563, 572
HpyF3I CTNAG 4 cut(s) 188, 386, 668, 692
HpySE526I ACGT 4 cut(s) 65, 346, 366, 464
Hsp92I GRCGYC 3 cut(s) 193, 346, 366
Hsp92II CATG 8 cut(s) 34, 56, 115, 251, 353, 394, 449, 612
HspAI GCGC 3 cut(s) 34, 328, 561
KroI GCCGGC 1 cut(s) 557
KroNI GCCGGC 1 cut(s) 559
Ksp22I TGATCA 1 cut(s) 27
Kzo9I GATC 5 cut(s) 22, 27, 55, 108, 704
LmnI GCTCC 4 cut(s) 511, 535, 580, 586
Lsp1109I GCAGC 3 cut(s) 199, 575, 578
LweI GCATC 2 cut(s) 170, 349
MaeII ACGT 4 cut(s) 65, 346, 366, 464
MalI GATC 5 cut(s) 24, 29, 57, 110, 706
MbiI CCGCTC 1 cut(s) 589
MboI GATC 5 cut(s) 22, 27, 55, 108, 704
MboII GAAGA 9 cut(s) 194, 249, 307, 416, 641, 696, 699, 749, 761
MfeI CAATTG 1 cut(s) 427
MflI RGATCY 2 cut(s) 22, 704
MhlI GDGCHC 2 cut(s) 291, 516
MluCI AATT 2 cut(s) 427, 472
MmeI TCCRAC 3 cut(s) 86, 375, 564
Mph1103I ATGCAT 1 cut(s) 458
MroNI GCCGGC 1 cut(s) 557
MspI CCGG 3 cut(s) 499, 533, 558
MspR9I CCNGG 1 cut(s) 230
MunI CAATTG 1 cut(s) 427
Mva1269I GAATGC 1 cut(s) 693
MvaI CCWGG 1 cut(s) 230
MvnI CGCG 1 cut(s) 330
MwoI GCNNNNNNNGC 4 cut(s) 128, 495, 563, 572
NaeI GCCGGC 1 cut(s) 559
NdeI CATATG 1 cut(s) 727
NdeII GATC 5 cut(s) 22, 27, 55, 108, 704
NgoMIV GCCGGC 1 cut(s) 557
NlaIII CATG 8 cut(s) 34, 56, 115, 251, 353, 394, 449, 612
NlaIV GGNNCC 4 cut(s) 513, 549, 576, 655
NmeAIII GCCGAG 1 cut(s) 289
NsiI ATGCAT 1 cut(s) 458
NspI RCATGY 1 cut(s) 394
PaeR7I CTCGAG 1 cut(s) 284
PagI TCATGA 1 cut(s) 349
PceI AGGCCT 1 cut(s) 282
PcsI WCGNNNNNNNCGW 4 cut(s) 180, 291, 375, 578
PctI GAATGC 1 cut(s) 693
PdiI GCCGGC 1 cut(s) 559
PkrI GCNGC 6 cut(s) 214, 217, 227, 304, 565, 568
PmaCI CACGTG 1 cut(s) 465
PmlI CACGTG 1 cut(s) 465
Ppu21I YACGTR 1 cut(s) 465
PpuMI RGGWCCY 1 cut(s) 548
PshAI GACNNNNGTC 1 cut(s) 196
Psp5II RGGWCCY 1 cut(s) 548
Psp6I CCWGG 1 cut(s) 228
PspCI CACGTG 1 cut(s) 465
PspGI CCWGG 1 cut(s) 228
PspN4I GGNNCC 4 cut(s) 513, 549, 576, 655
PspPI GGNCC 2 cut(s) 244, 548
PspPPI RGGWCCY 1 cut(s) 548
PspXI VCTCGAGB 1 cut(s) 284
PsuI RGATCY 2 cut(s) 22, 704
RsaI GTAC 1 cut(s) 159
RsaNI GTAC 1 cut(s) 158
SatI GCNGC 6 cut(s) 213, 216, 226, 303, 564, 567
Sau3AI GATC 5 cut(s) 22, 27, 55, 108, 704
Sau96I GGNCC 2 cut(s) 244, 548
ScaI AGTACT 1 cut(s) 159
ScrFI CCNGG 1 cut(s) 230
SduI GDGCHC 2 cut(s) 291, 516
SetI ASST 9 cut(s) 68, 90, 173, 214, 349, 369, 419, 443, 467
SfaNI GCATC 2 cut(s) 170, 349
Sfr274I CTCGAG 1 cut(s) 284
SinI GGWCC 1 cut(s) 548
SlaI CTCGAG 1 cut(s) 284
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 2 cut(s) 427, 472
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 7 cut(s) 216, 226, 261, 303, 509, 589, 614
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 1 cut(s) 228
TaaI ACNGT 4 cut(s) 241, 582, 635, 765
TaiI ACGT 4 cut(s) 68, 349, 369, 467
TaqI TCGA 5 cut(s) 42, 236, 285, 369, 662
TasI AATT 2 cut(s) 427, 472
TatI WGTACW 1 cut(s) 157
TauI GCSGC 3 cut(s) 218, 228, 305
TseI GCWGC 3 cut(s) 212, 563, 566
TspDTI ATGAA 1 cut(s) 417
TspGWI ACGGA 4 cut(s) 127, 283, 518, 589
VpaK11BI GGWCC 1 cut(s) 548
XapI RAATTY 1 cut(s) 472
XceI RCATGY 1 cut(s) 394
XhoI CTCGAG 1 cut(s) 284
ZraI GACGTC 2 cut(s) 347, 367
ZrmI AGTACT 1 cut(s) 159
Zsp2I ATGCAT 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.