Rh2DG407600

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000338
Physical Location & Seq
Forward (+)
59067292 .. 59073363
6072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG407600.1

Sequence Viewer

Length: 1920 bp
ATGATGAGTGGAGCAGCTGCAAAACGTGATGCGGGAGTAGCTGAAATCTGCTGGCATGACATAATGACACGGCATGTCGTTAAGTTTGTTTCGCGCACCAGAGGTCCTCTGCATTTTCACCTCAGGTTGAAATTTGGAGAAGTACAAGCGAAGCTTAGAGCTTACAGAGAAATGGATGGAAGTACTTCTGGCGTAGAAGACAATGATATTGATTGGAACACAGAAGATGAGCTTGAATTGGACAACTTCACTTTATCTCCTTGTTCTAGTTTGCTACTTACTGGTGGCGAAGCTAATGCCTTCCCTGGGGAGGCGAGCTCATGTCCAAGTTCCTCCAACTCCAAAGTTCTTGATCAGTTTATAGGGATGGGATTTTCTAAGAAGATGGTCGAAAAAGCAATTCAGGAACATGGAGAAGAAAATACAGATGCAATTCTGGAAATGCTCCTCACAGATTCAGTTCTAGAAAGTTCTTCCCAAGAACTGCAACAAACCGATTCAGATCACTTTTCCTCTGATTATGATGGAAGCTTTTTGGATGACTTTTCAGATTTCGAAAGCTCTGGTGATGAGGAAATCATGAGTCCTACATCCGAGGAGGAAAAGCTACTCATGTCCTTGATCAAAATGGGGTACACAGAAGAGGAGGCTTCCATAGCTATAGAAAGATGTGGTCTTAGCTCTTCACTTCTGGAATTGACTGATTTTTTATCTGCTGCTCATTTGGCAAAGGCAGAAGATGCCCTTCTTCCTCTAGAAGAGAAGCCTGGACTAAAACATTTGCACACTGATTATCCTAAGAAGAAAAGGAAACTTTTGGTTGATGAAGTGTCGAAAAGGAAAAGGAAAAATAGGCTCATAGGCGAGGATAATGAGACAGTTCGTCTCCCAAATCCAATGATTGGGTTTGGTATTCCAACTGGACCATGCCAATCTTACAGAAATCTTCCAAAGGCAGCCATAGGACCTCCCTATTTTTATTATGAAAATGTAGCCCTCACTCCTAAAGGGGTTTGGGACACTATATCGAGATTCCTATATGATGTTCCACCTGAATTTGTTGACTCTAAGTACTTCTGTGCTGCTGCTAGAAAAAGAGGTTATGTTCACAATCTTCCAATCGATAATAGAATCCCTCTCGTTCCACTTCCCCCACAAACCATACATGAGGCATTGCCCATGTCAAGAAAGTGGTGGCCTTCTTGGGACACACGGACAAAGCTAAATTGCTTACAAACTTGCCATTCAAGTGCAAAGTTAACAGAGAGGATCATGAAGGCTCTTGAGGGCTATGATGACATTCCGCCAGAGAGAGTCCAGCGGGGTGTAATGCATGAATGCCGTAAGTGGAATCTAGTGTGGGTTGGAAAAAATAGGGTCGCCCCACTTGAGCCTGATGAATTTGAAATGCTTTTGGGGTTTCCAAAGGACCACACCAGGGGAATAAGCAGGACTGATAGATATAAATCACTCGGGAATGCATTTCAGATTGACACCGTTGCATACCACCTCTCTGTTTTGCGAGACATGTTTCCCAATGGCATCAATGTCCTCTCCCTTTTCTCTGGGATAGGTGGGGCGGAAATAGCCCTTCATCGGCTTGGTATCCGTATGAAGAATGTTGTGTCTCTAGAGATTTCAGAAGTTAACAGAAACGTTCTGAGGTGTTGGTGGGAGCAAACAAACCAGAGGGGGAATTTGATTCACCTTCCTGATGTGCAAGAGCTTAATGCTGACCGCTTGGAACAGTTTATGAGTTCATTTGGTGGCTTTGATCTAGTAGTTGGTGGCAGTCCCTGCAACAATCTTACAGGTAGCAATCGATATCATAGAGATGGACTCGAGGGTAAAGAATCTTCCCTATTCTATCATTTCTTTCGTATACTGGACTTGGTTAAGTCTATCATGGCAGGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

639

Amino Acids

72.09

Weight (kDa)

5.54

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_methylase PF00145 516 - 630 3.7e-08 C-5 cytosine-specific DNA methylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 902
AccI GTMKAC 1 cut(s) 1882
AccII CGCG 1 cut(s) 94
AciI CCGC 5 cut(s) 32, 1304, 1321, 1580, 1738
AclI AACGTT 1 cut(s) 1656
AclWI GGATC 1 cut(s) 1277
AcsI RAATTY 4 cut(s) 131, 1055, 1400, 1696
AfaI GTAC 4 cut(s) 144, 184, 635, 1073
AfiI CCNNNNNNNGG 5 cut(s) 306, 310, 902, 1438, 1596
AflIII ACRYGT 1 cut(s) 1527
AgsI TTSAA 4 cut(s) 130, 236, 1248, 1406
AhdI GACNNNNNGTC 1 cut(s) 882
AjnI CCWGG 3 cut(s) 304, 766, 1436
Alw21I GWGCWC 1 cut(s) 320
Alw26I GTCTC 4 cut(s) 869, 890, 1518, 1632
AlwI GGATC 1 cut(s) 1277
AlwNI CAGNNNCTG 1 cut(s) 1797
Ama87I CYCGRG 2 cut(s) 1472, 1841
AoxI GGCC 1 cut(s) 1196
ApeKI GCWGC 6 cut(s) 14, 17, 716, 956, 1082, 1085
ApoI RAATTY 4 cut(s) 131, 1055, 1400, 1696
Asp700I GAANNNNTTC 1 cut(s) 184
AspLEI GCGC 1 cut(s) 96
AspS9I GGNCC 4 cut(s) 104, 923, 965, 1429
AsuHPI GGTGA 3 cut(s) 110, 578, 1697
AsuII TTCGAA 1 cut(s) 555
AvaI CYCGRG 2 cut(s) 1472, 1841
AvaII GGWCC 4 cut(s) 104, 923, 965, 1429
AxyI CCTNAGG 1 cut(s) 122
BanII GRGCYC 1 cut(s) 320
BarI GAAGNNNNNNTAC 2 cut(s) 1840, 1872
BbsI GAAGAC 1 cut(s) 204
Bbv12I GWGCWC 1 cut(s) 320
BbvI GCAGC 6 cut(s) 4, 26, 703, 968, 1069, 1072
BccI CCATC 5 cut(s) 170, 361, 379, 518, 1829
BceAI ACGGC 2 cut(s) 86, 1326
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 3 cut(s) 306, 768, 1438
BciVI GTATCC 1 cut(s) 1616
BclI TGATCA 2 cut(s) 352, 621
BcoDI GTCTC 4 cut(s) 869, 890, 1518, 1632
BfaI CTAG 7 cut(s) 267, 464, 755, 1089, 1355, 1631, 1778
BfmI CTRYAG 1 cut(s) 660
BfuI GTATCC 1 cut(s) 1616
BisI GCNGC 6 cut(s) 15, 18, 717, 957, 1083, 1086
BlsI GCNGC 6 cut(s) 16, 19, 718, 958, 1084, 1087
BmcAI AGTACT 2 cut(s) 184, 1073
Bme1390I CCNGG 3 cut(s) 306, 768, 1438
Bme18I GGWCC 4 cut(s) 104, 923, 965, 1429
BmeRI GACNNNNNGTC 1 cut(s) 882
BmeT110I CYCGRG 2 cut(s) 1472, 1841
BmgT120I GGNCC 4 cut(s) 104, 923, 965, 1429
BmrFI CCNGG 3 cut(s) 306, 768, 1438
BmsI GCATC 4 cut(s) 19, 418, 730, 1551
BpiI GAAGAC 1 cut(s) 204
BplI GAGNNNNNCTC 4 cut(s) 302, 334, 1824, 1856
Bpu14I TTCGAA 1 cut(s) 555
BpuEI CTTGAG 2 cut(s) 1304, 1409
Bsa29I ATCGAT 2 cut(s) 1122, 1822
BsaBI GATNNNNATC 2 cut(s) 501, 1465
BsaJI CCNNGG 4 cut(s) 304, 305, 594, 1437
BsaXI ACNNNNNCTCC 2 cut(s) 241, 271
Bsc4I CCNNNNNNNGG 5 cut(s) 306, 310, 902, 1438, 1596
Bse1I ACTGG 3 cut(s) 286, 925, 1890
Bse21I CCTNAGG 1 cut(s) 122
Bse3DI GCAATG 1 cut(s) 1172
Bse8I GATNNNNATC 2 cut(s) 501, 1465
BseBI CCWGG 3 cut(s) 306, 768, 1438
BseCI ATCGAT 2 cut(s) 1122, 1822
BseDI CCNNGG 4 cut(s) 304, 305, 594, 1437
BseGI GGATG 4 cut(s) 181, 372, 544, 590
BseJI GATNNNNATC 2 cut(s) 501, 1465
BseLI CCNNNNNNNGG 5 cut(s) 306, 310, 902, 1438, 1596
BseMI GCAATG 1 cut(s) 1172
BseMII CTCAG 2 cut(s) 136, 1652
BseNI ACTGG 3 cut(s) 286, 925, 1890
BseRI GAGGAG 3 cut(s) 437, 611, 659
BseXI GCAGC 6 cut(s) 4, 26, 703, 968, 1069, 1072
Bsh1236I CGCG 1 cut(s) 94
BshFI GGCC 1 cut(s) 1198
BshVI ATCGAT 2 cut(s) 1122, 1822
BsiHKAI GWGCWC 1 cut(s) 320
BsiHKCI CYCGRG 2 cut(s) 1472, 1841
BslFI GGGAC 3 cut(s) 1031, 1220, 1779
BslI CCNNNNNNNGG 5 cut(s) 306, 310, 902, 1438, 1596
BsmAI GTCTC 4 cut(s) 869, 890, 1518, 1632
BsmBI CGTCTC 1 cut(s) 890
BsmFI GGGAC 3 cut(s) 1031, 1220, 1779
BsmI GAATGC 2 cut(s) 1343, 1483
BsnI GGCC 1 cut(s) 1198
BsoBI CYCGRG 2 cut(s) 1472, 1841
Bsp119I TTCGAA 1 cut(s) 555
Bsp1286I GDGCHC 1 cut(s) 320
Bsp143I GATC 5 cut(s) 352, 502, 621, 1269, 1774
BspACI CCGC 5 cut(s) 32, 1304, 1321, 1580, 1738
BspANI GGCC 1 cut(s) 1198
BspCNI CTCAG 2 cut(s) 135, 1653
BspDI ATCGAT 2 cut(s) 1122, 1822
BspFNI CGCG 1 cut(s) 94
BspHI TCATGA 2 cut(s) 579, 1272
BspPI GGATC 1 cut(s) 1277
BspQI GCTCTTC 1 cut(s) 688
BspT104I TTCGAA 1 cut(s) 555
BsrDI GCAATG 1 cut(s) 1172
BsrI ACTGG 3 cut(s) 286, 925, 1890
BssECI CCNNGG 4 cut(s) 304, 305, 594, 1437
BssMI GATC 5 cut(s) 352, 502, 621, 1269, 1774
BssNAI GTATAC 1 cut(s) 1883
Bst1107I GTATAC 1 cut(s) 1883
Bst2UI CCWGG 3 cut(s) 306, 768, 1438
Bst4CI ACNGT 3 cut(s) 880, 1498, 1749
Bst6I CTCTTC 3 cut(s) 636, 688, 753
BstAPI GCANNNNNTGC 2 cut(s) 740, 1797
BstBI TTCGAA 1 cut(s) 555
BstC8I GCNNGC 2 cut(s) 53, 316
BstDEI CTNAG 7 cut(s) 122, 155, 378, 677, 798, 1068, 1661
BstF5I GGATG 4 cut(s) 181, 372, 544, 590
BstFNI CGCG 1 cut(s) 94
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 5 cut(s) 355, 505, 624, 1272, 1777
BstMAI GTCTC 4 cut(s) 869, 890, 1518, 1632
BstMBI GATC 5 cut(s) 352, 502, 621, 1269, 1774
BstMWI GCNNNNNNNGC 6 cut(s) 38, 656, 725, 740, 1586, 1797
BstNI CCWGG 3 cut(s) 306, 768, 1438
BstNSI RCATGY 2 cut(s) 77, 1531
BstSCI CCNGG 3 cut(s) 304, 766, 1436
BstSFI CTRYAG 1 cut(s) 660
BstUI CGCG 1 cut(s) 94
BstV1I GCAGC 6 cut(s) 4, 26, 703, 968, 1069, 1072
BstV2I GAAGAC 1 cut(s) 204
BstZ17I GTATAC 1 cut(s) 1883
Bsu15I ATCGAT 2 cut(s) 1122, 1822
Bsu36I CCTNAGG 1 cut(s) 122
BsuI GTATCC 1 cut(s) 1616
BsuRI GGCC 1 cut(s) 1198
BsuTUI ATCGAT 2 cut(s) 1122, 1822
BtsCI GGATG 4 cut(s) 181, 372, 544, 590
BtsIMutI CAGTG 1 cut(s) 786
Cac8I GCNNGC 2 cut(s) 53, 316
CaiI CAGNNNCTG 1 cut(s) 1797
CciI TCATGA 2 cut(s) 579, 1272
CfoI GCGC 1 cut(s) 96
Cfr13I GGNCC 4 cut(s) 104, 923, 965, 1429
ClaI ATCGAT 2 cut(s) 1122, 1822
Csp6I GTAC 4 cut(s) 143, 183, 634, 1072
CviQI GTAC 4 cut(s) 143, 183, 634, 1072
DdeI CTNAG 7 cut(s) 122, 155, 378, 677, 798, 1068, 1661
DpnI GATC 5 cut(s) 354, 504, 623, 1271, 1776
DpnII GATC 5 cut(s) 352, 502, 621, 1269, 1774
DriI GACNNNNNGTC 1 cut(s) 882
Eam1104I CTCTTC 3 cut(s) 636, 688, 753
Eam1105I GACNNNNNGTC 1 cut(s) 882
EarI CTCTTC 3 cut(s) 636, 688, 753
EciI GGCGGA 2 cut(s) 1293, 1595
Ecl136II GAGCTC 1 cut(s) 318
Eco24I GRGCYC 1 cut(s) 320
Eco32I GATATC 1 cut(s) 1826
Eco47I GGWCC 4 cut(s) 104, 923, 965, 1429
Eco53kI GAGCTC 1 cut(s) 318
Eco81I CCTNAGG 1 cut(s) 122
Eco88I CYCGRG 2 cut(s) 1472, 1841
EcoICRI GAGCTC 1 cut(s) 318
EcoO109I RGGNCCY 2 cut(s) 104, 965
EcoRII CCWGG 3 cut(s) 304, 766, 1436
EcoRV GATATC 1 cut(s) 1826
EcoT22I ATGCAT 2 cut(s) 1335, 1483
EcoT38I GRGCYC 1 cut(s) 320
Esp3I CGTCTC 1 cut(s) 890
FalI AAGNNNNNCTT 6 cut(s) 138, 170, 216, 248, 729, 761
FaqI GGGAC 3 cut(s) 1031, 1220, 1779
FauI CCCGC 2 cut(s) 25, 1314
FbaI TGATCA 2 cut(s) 352, 621
FblI GTMKAC 1 cut(s) 1882
Fnu4HI GCNGC 6 cut(s) 15, 18, 717, 957, 1083, 1086
FokI GGATG 4 cut(s) 188, 379, 551, 577
FriOI GRGCYC 1 cut(s) 320
Fsp4HI GCNGC 6 cut(s) 15, 18, 717, 957, 1083, 1086
FspBI CTAG 7 cut(s) 267, 464, 755, 1089, 1355, 1631, 1778
GlaI GCGC 1 cut(s) 95
GluI GCNGC 6 cut(s) 15, 18, 717, 957, 1083, 1086
HaeIII GGCC 1 cut(s) 1198
HhaI GCGC 1 cut(s) 96
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HincII GTYRAC 3 cut(s) 1063, 1260, 1648
HindII GTYRAC 3 cut(s) 1063, 1260, 1648
HindIII AAGCTT 2 cut(s) 152, 529
HpaI GTTAAC 2 cut(s) 1260, 1648
HphI GGTGA 3 cut(s) 110, 578, 1697
Hpy166II GTNNAC 6 cut(s) 636, 1063, 1108, 1260, 1648, 1883
Hpy188I TCNGA 7 cut(s) 502, 517, 550, 595, 1488, 1642, 1662
Hpy8I GTNNAC 6 cut(s) 636, 1063, 1108, 1260, 1648, 1883
HpyAV CCTTC 6 cut(s) 310, 755, 1209, 1270, 1601, 1718
HpyCH4III ACNGT 3 cut(s) 880, 1498, 1749
HpyCH4IV ACGT 2 cut(s) 25, 1656
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 656, 725, 740, 1586, 1797
HpyF3I CTNAG 7 cut(s) 122, 155, 378, 677, 798, 1068, 1661
HpySE526I ACGT 2 cut(s) 25, 1656
HspAI GCGC 1 cut(s) 94
Ksp22I TGATCA 2 cut(s) 352, 621
KspAI GTTAAC 2 cut(s) 1260, 1648
Kzo9I GATC 5 cut(s) 352, 502, 621, 1269, 1774
LguI GCTCTTC 1 cut(s) 688
LmnI GCTCC 3 cut(s) 11, 450, 1675
Lsp1109I GCAGC 6 cut(s) 4, 26, 703, 968, 1069, 1072
LweI GCATC 4 cut(s) 19, 418, 730, 1551
MaeI CTAG 7 cut(s) 267, 464, 755, 1089, 1355, 1631, 1778
MaeII ACGT 2 cut(s) 25, 1656
MalI GATC 5 cut(s) 354, 504, 623, 1271, 1776
MboI GATC 5 cut(s) 352, 502, 621, 1269, 1774
MhlI GDGCHC 1 cut(s) 320
MluCI AATT 9 cut(s) 131, 236, 399, 432, 695, 1055, 1225, 1400, 1696
MlyI GAGTC 4 cut(s) 592, 1058, 1323, 1833
MmeI TCCRAC 3 cut(s) 360, 941, 1345
Mph1103I ATGCAT 2 cut(s) 1335, 1483
MroXI GAANNNNTTC 1 cut(s) 184
MseI TTAA 5 cut(s) 81, 1259, 1647, 1728, 1896
MslI CAYNNNNRTG 2 cut(s) 1248, 1833
MspA1I CMGCKG 2 cut(s) 17, 1321
MspR9I CCNGG 3 cut(s) 306, 768, 1438
Mva1269I GAATGC 2 cut(s) 1343, 1483
MvaI CCWGG 3 cut(s) 306, 768, 1438
MvnI CGCG 1 cut(s) 94
MwoI GCNNNNNNNGC 6 cut(s) 38, 656, 725, 740, 1586, 1797
NdeII GATC 5 cut(s) 352, 502, 621, 1269, 1774
NsiI ATGCAT 2 cut(s) 1335, 1483
NspI RCATGY 2 cut(s) 77, 1531
NspV TTCGAA 1 cut(s) 555
PaeR7I CTCGAG 1 cut(s) 1841
PagI TCATGA 2 cut(s) 579, 1272
PasI CCCWGGG 1 cut(s) 305
PciI ACATGT 1 cut(s) 1527
PciSI GCTCTTC 1 cut(s) 688
PctI GAATGC 2 cut(s) 1343, 1483
PdmI GAANNNNTTC 1 cut(s) 184
PfeI GAWTC 7 cut(s) 455, 497, 1032, 1131, 1351, 1702, 1853
PflMI CCANNNNNTGG 1 cut(s) 902
PkrI GCNGC 6 cut(s) 16, 19, 718, 958, 1084, 1087
PleI GAGTC 4 cut(s) 591, 1058, 1322, 1833
PpsI GAGTC 4 cut(s) 591, 1058, 1322, 1833
PpuMI RGGWCCY 2 cut(s) 104, 965
PscI ACATGT 1 cut(s) 1527
Psp124BI GAGCTC 1 cut(s) 320
Psp1406I AACGTT 1 cut(s) 1656
Psp5II RGGWCCY 2 cut(s) 104, 965
Psp6I CCWGG 3 cut(s) 304, 766, 1436
PspGI CCWGG 3 cut(s) 304, 766, 1436
PspPI GGNCC 4 cut(s) 104, 923, 965, 1429
PspPPI RGGWCCY 2 cut(s) 104, 965
PspXI VCTCGAGB 1 cut(s) 1841
PstNI CAGNNNCTG 1 cut(s) 1797
PvuII CAGCTG 1 cut(s) 17
RsaI GTAC 4 cut(s) 144, 184, 635, 1073
RsaNI GTAC 4 cut(s) 143, 183, 634, 1072
RseI CAYNNNNRTG 2 cut(s) 1248, 1833
SacI GAGCTC 1 cut(s) 320
SapI GCTCTTC 1 cut(s) 688
SaqAI TTAA 5 cut(s) 81, 1259, 1647, 1728, 1896
SatI GCNGC 6 cut(s) 15, 18, 717, 957, 1083, 1086
Sau3AI GATC 5 cut(s) 352, 502, 621, 1269, 1774
Sau96I GGNCC 4 cut(s) 104, 923, 965, 1429
ScaI AGTACT 2 cut(s) 184, 1073
SchI GAGTC 4 cut(s) 592, 1058, 1323, 1833
ScrFI CCNGG 3 cut(s) 306, 768, 1438
SduI GDGCHC 1 cut(s) 320
SfaNI GCATC 4 cut(s) 19, 418, 730, 1551
SfcI CTRYAG 1 cut(s) 660
Sfr274I CTCGAG 1 cut(s) 1841
SfuI TTCGAA 1 cut(s) 555
SinI GGWCC 4 cut(s) 104, 923, 965, 1429
SlaI CTCGAG 1 cut(s) 1841
SmiMI CAYNNNNRTG 2 cut(s) 1248, 1833
SmlI CTYRAG 3 cut(s) 1283, 1388, 1841
SmoI CTYRAG 3 cut(s) 1283, 1388, 1841
Sse9I AATT 9 cut(s) 131, 236, 399, 432, 695, 1055, 1225, 1400, 1696
SsiI CCGC 5 cut(s) 32, 1304, 1321, 1580, 1738
SspMI CTAG 7 cut(s) 267, 464, 755, 1089, 1355, 1631, 1778
SstI GAGCTC 1 cut(s) 320
StyD4I CCNGG 3 cut(s) 304, 766, 1436
TaaI ACNGT 3 cut(s) 880, 1498, 1749
TaiI ACGT 2 cut(s) 28, 1659
TaqI TCGA 7 cut(s) 390, 555, 833, 1028, 1122, 1822, 1842
TasI AATT 9 cut(s) 131, 236, 399, 432, 695, 1055, 1225, 1400, 1696
TatI WGTACW 3 cut(s) 142, 182, 1071
TfiI GAWTC 7 cut(s) 455, 497, 1032, 1131, 1351, 1702, 1853
Tru1I TTAA 5 cut(s) 81, 1259, 1647, 1728, 1896
Tru9I TTAA 5 cut(s) 81, 1259, 1647, 1728, 1896
TscAI CASTG 1 cut(s) 793
TseI GCWGC 6 cut(s) 14, 17, 716, 956, 1082, 1085
TspDTI ATGAA 8 cut(s) 840, 999, 1289, 1350, 1413, 1583, 1628, 1749
TspGWI ACGGA 2 cut(s) 1228, 1598
TspRI CASTG 1 cut(s) 793
Van91I CCANNNNNTGG 1 cut(s) 902
VpaK11BI GGWCC 4 cut(s) 104, 923, 965, 1429
XapI RAATTY 4 cut(s) 131, 1055, 1400, 1696
XbaI TCTAGA 3 cut(s) 463, 754, 1630
XceI RCATGY 2 cut(s) 77, 1531
XhoI CTCGAG 1 cut(s) 1841
XmiI GTMKAC 1 cut(s) 1882
XmnI GAANNNNTTC 1 cut(s) 184
XspI CTAG 7 cut(s) 267, 464, 755, 1089, 1355, 1631, 1778
ZrmI AGTACT 2 cut(s) 184, 1073
Zsp2I ATGCAT 2 cut(s) 1335, 1483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.