Rorug02G0333200

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000338
Physical Location & Seq
Forward (+)
41280490 .. 41284039
3550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0333200.1

Sequence Viewer

Length: 1728 bp
ATGGCAAAGAAACTTGCATTATTCCTTTATTTCCTATCCATCATGCTAGTTAATCTAACCAGCTTTGGCCAAAGTCGTTCTATTGCTACAAATGACTTCAATTTAGTCTCTGATGGAGTAAACCACACTACTGGGGATAAACCGAATTTTCTTTGGTTAAAGCATAGCTTGTTTGCATCTGATAGCTGTGATGAGACATATGGGTTCTTGCCATGCACCAGCACAGTCCTTGGTAATATCTTCCTCATTATCGTCTATGGTTACTTGATGTTCCTTTCAGCCAAGTTATTGTCAGCTGGAAGTGAGATTCTGCTGCAAATTTTAGGACCTGGTATCATAGGGGGTCTCTTCTTGCCTCTGTTGAGTACTGTACCTGATGCCACCATTATCCTTGCATCAGGACTTTCTGGGGACACGGCAACGGCACAAAGTCAGGTCTCCGTTGGAATGGGCTTGCTAGCTGGATCCAATGTAATGCTTCTCACAATCCTATGGGGGACCTGTCTTCTAGTTGGCAAATGTGACCTTGAAAATTCAGTTGCAGTTGATGAAAAAGATACAAAGCGTTTTAGCTTAACTGGATCTGGAGTGAGCACAGATATTTGGACAAGCTATGCTGCATGGATCATGGTTATCTCCATTATTCCTTTTGTAATAGTCCAACTACCTCAAGTTTTCACTGCGACTTCGGATAGTAGCTTGCCAATTCTAAGTTCACTCATTGTTGCAATCTGTTTTGTGATCGCTTATAGCATCTATCAGCCTTGGATTCAGAAGAGAAGACTTGCATATGCAAAGCATAAGCATGTGATGTCAGAGATTCTAAAACAGTTGAAAACAAACTCGCTTGGAAAATTGCTTACAGATGATGGTGATCCTAACAAAGTTGTTATAGAGAAGTTATTCAGGACACTTGATCAGAACTCGAATGGTTATTTGAACACCACAGACTTAAGATCTTTGATAATAGGAATCCAATTTGATGATGACGTAGATATAAATATCGATGAAGCCATTTCTCAAGTGATGAGAGACTTTGACACAACTCGTGATTCAAAGATTGATGTTGATGAATTCTTCAAAGGAATTTCAAGGTGGCTTAACAAGGCTAAGCGTGCTGCAATGATGGACCGTGGAAAGGCTCCGCTATCAATGAAACTATTAGATGATTTTGATAAGCAAACAAAGGAAGAACAAGATCGGTATGGGGATCAGATTGATGAGATTGTGGAGGATGTTAAAAATGCAAACTGGCATGCCTCAAAAGCAGCACTGATGTTGCTTCTGGGAACCATTGTTGCTGCTGTGGTTGCTGATCCCCTTGTTGATGCTGTTGACAACTTCTCAACAGCTACAAGTATTCCTACATTCTTCGTCTCATTTGTTATTCTGCCTTTTGTTAGCTCCAGTGAGATTGTGTCCACTCTAATTTTTGTCAGCCGGAAGAAGCAGAGAACAGCATCATTGGCCTACTCTGCGATATATGGATCAGTAACAATGAGTAACATCCTCTCCCTGGCAGTGTTCTTGGCTCTTGTATATATTCGAAATCTGACATGGAGCTTCTCGTCTGAAGTTCTTGTCATTATAATTGTCTGCATTCTAATGGGAGTTGTTGCTGGTTTCCGCACCACCTTTCCTGTTTGGATGTGTTTTGGGGCTGTACTGCTCTATCCACTTTCTCTGTTGCTGGTTTGCATTCTTGAATATGTTTTTGGGTGGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

575

Amino Acids

63.23

Weight (kDa)

5.21

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_Ca_ex PF01699 80 - 253 4.2e-07 Sodium/calcium exchanger protein
EF-hand_7 PF13499 297 - 363 5.5e-11 EF-hand domain pair
Na_Ca_ex PF01699 423 - 565 4e-11 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1589
AciI CCGC 2 cut(s) 1145, 1627
AclWI GGATC 8 cut(s) 459, 472, 589, 632, 869, 1218, 1310, 1495
AcoI YGGCCR 1 cut(s) 67
AcsI RAATTY 5 cut(s) 145, 318, 532, 1073, 1086
AcuI CTGAAG 1 cut(s) 1593
AfaI GTAC 3 cut(s) 367, 372, 1665
AfiI CCNNNNNNNGG 2 cut(s) 1138, 1516
AflII CTTAAG 1 cut(s) 952
AgsI TTSAA 8 cut(s) 100, 530, 835, 940, 1056, 1081, 1092, 1706
AjnI CCWGG 2 cut(s) 328, 1515
AjuI GAANNNNNNNTTGG 3 cut(s) 697, 729, 1698
Alw21I GWGCWC 1 cut(s) 596
Alw26I GTCTC 6 cut(s) 112, 188, 350, 442, 1026, 1381
AlwI GGATC 8 cut(s) 459, 472, 589, 632, 869, 1218, 1310, 1495
AoxI GGCC 2 cut(s) 67, 1467
ApeKI GCWGC 5 cut(s) 313, 617, 1118, 1268, 1301
ApoI RAATTY 5 cut(s) 145, 318, 532, 1073, 1086
Asp700I GAANNNNTTC 1 cut(s) 902
AspS9I GGNCC 3 cut(s) 326, 498, 1129
AsuHPI GGTGA 1 cut(s) 884
AsuII TTCGAA 1 cut(s) 1546
AsuNHI GCTAGC 1 cut(s) 457
AvaII GGWCC 3 cut(s) 326, 498, 1129
BalI TGGCCA 1 cut(s) 69
BamHI GGATCC 1 cut(s) 464
BauI CACGAG 1 cut(s) 1047
BbsI GAAGAC 2 cut(s) 497, 787
Bbv12I GWGCWC 1 cut(s) 596
BbvI GCAGC 5 cut(s) 300, 604, 1105, 1280, 1288
BccI CCATC 4 cut(s) 47, 107, 863, 1120
BceAI ACGGC 2 cut(s) 432, 438
BciT130I CCWGG 2 cut(s) 330, 1517
BclI TGATCA 1 cut(s) 916
BcoDI GTCTC 6 cut(s) 112, 188, 350, 442, 1026, 1381
BfaI CTAG 3 cut(s) 47, 458, 509
BfrI CTTAAG 1 cut(s) 952
BglII AGATCT 1 cut(s) 956
BisI GCNGC 5 cut(s) 314, 618, 1119, 1269, 1302
BlpI GCTNAGC 1 cut(s) 1110
BlsI GCNGC 5 cut(s) 315, 619, 1120, 1270, 1303
BmcAI AGTACT 1 cut(s) 367
Bme1390I CCNGG 2 cut(s) 330, 1517
Bme18I GGWCC 3 cut(s) 326, 498, 1129
BmgT120I GGNCC 3 cut(s) 326, 498, 1129
BmiI GGNNCC 4 cut(s) 466, 499, 1143, 1291
BmrFI CCNGG 2 cut(s) 330, 1517
BmrI ACTGGG 1 cut(s) 141
BmsI GCATC 6 cut(s) 185, 367, 404, 762, 1318, 1469
BmtI GCTAGC 1 cut(s) 461
BmuI ACTGGG 1 cut(s) 141
BpiI GAAGAC 2 cut(s) 497, 787
BpmI CTGGAG 2 cut(s) 606, 1390
Bpu1102I GCTNAGC 1 cut(s) 1110
Bpu14I TTCGAA 1 cut(s) 1546
BpuEI CTTGAG 2 cut(s) 654, 1005
Bsa29I ATCGAT 1 cut(s) 1005
BsaBI GATNNNNATC 1 cut(s) 873
BsaI GGTCTC 2 cut(s) 350, 442
BsaJI CCNNGG 4 cut(s) 229, 764, 1132, 1515
BsaXI ACNNNNNCTCC 2 cut(s) 1496, 1526
Bsc4I CCNNNNNNNGG 2 cut(s) 1138, 1516
Bse1I ACTGG 4 cut(s) 136, 583, 1256, 1407
Bse3DI GCAATG 1 cut(s) 1128
Bse8I GATNNNNATC 1 cut(s) 873
BseBI CCWGG 2 cut(s) 330, 1517
BseCI ATCGAT 1 cut(s) 1005
BseDI CCNNGG 4 cut(s) 229, 764, 1132, 1515
BseGI GGATG 3 cut(s) 1240, 1506, 1653
BseJI GATNNNNATC 1 cut(s) 873
BseLI CCNNNNNNNGG 2 cut(s) 1138, 1516
BseMI GCAATG 1 cut(s) 1128
BseNI ACTGG 4 cut(s) 136, 583, 1256, 1407
BseXI GCAGC 5 cut(s) 300, 604, 1105, 1280, 1288
BshFI GGCC 2 cut(s) 69, 1469
BshVI ATCGAT 1 cut(s) 1005
BsiHKAI GWGCWC 1 cut(s) 596
BsiSI CCGG 1 cut(s) 1441
BslFI GGGAC 2 cut(s) 425, 511
BslI CCNNNNNNNGG 2 cut(s) 1138, 1516
BsmAI GTCTC 6 cut(s) 112, 188, 350, 442, 1026, 1381
BsmBI CGTCTC 1 cut(s) 1381
BsmFI GGGAC 2 cut(s) 425, 511
BsmI GAATGC 2 cut(s) 1599, 1698
BsnI GGCC 2 cut(s) 69, 1469
Bso31I GGTCTC 2 cut(s) 350, 442
Bsp119I TTCGAA 1 cut(s) 1546
Bsp1286I GDGCHC 1 cut(s) 596
Bsp1720I GCTNAGC 1 cut(s) 1110
BspACI CCGC 2 cut(s) 1145, 1627
BspANI GGCC 2 cut(s) 69, 1469
BspDI ATCGAT 1 cut(s) 1005
BspLI GGNNCC 4 cut(s) 466, 499, 1143, 1291
BspOI GCTAGC 1 cut(s) 461
BspPI GGATC 8 cut(s) 459, 472, 589, 632, 869, 1218, 1310, 1495
BspT104I TTCGAA 1 cut(s) 1546
BspTI CTTAAG 1 cut(s) 952
BspTNI GGTCTC 2 cut(s) 350, 442
BsrDI GCAATG 1 cut(s) 1128
BsrI ACTGG 4 cut(s) 136, 583, 1256, 1407
BssECI CCNNGG 4 cut(s) 229, 764, 1132, 1515
BssSI CACGAG 1 cut(s) 1047
BssT1I CCWWGG 2 cut(s) 229, 764
Bst2BI CACGAG 1 cut(s) 1047
Bst2UI CCWGG 2 cut(s) 330, 1517
Bst4CI ACNGT 4 cut(s) 226, 370, 831, 1133
Bst6I CTCTTC 2 cut(s) 353, 770
BstAFI CTTAAG 1 cut(s) 952
BstBI TTCGAA 1 cut(s) 1546
BstC8I GCNNGC 5 cut(s) 455, 459, 701, 1116, 1257
BstDEI CTNAG 2 cut(s) 710, 1110
BstDSI CCRYGG 1 cut(s) 1132
BstF5I GGATG 3 cut(s) 1240, 1506, 1653
BstMAI GTCTC 6 cut(s) 112, 188, 350, 442, 1026, 1381
BstMWI GCNNNNNNNGC 5 cut(s) 1115, 1265, 1310, 1466, 1475
BstNI CCWGG 2 cut(s) 330, 1517
BstNSI RCATGY 2 cut(s) 809, 1259
BstSCI CCNGG 2 cut(s) 328, 1515
BstV1I GCAGC 5 cut(s) 300, 604, 1105, 1280, 1288
BstV2I GAAGAC 2 cut(s) 497, 787
BstX2I RGATCY 3 cut(s) 464, 581, 956
BstXI CCANNNNNNTGG 1 cut(s) 131
BstYI RGATCY 3 cut(s) 464, 581, 956
Bsu15I ATCGAT 1 cut(s) 1005
BsuRI GGCC 2 cut(s) 69, 1469
BsuTUI ATCGAT 1 cut(s) 1005
BtgI CCRYGG 1 cut(s) 1132
BtsCI GGATG 3 cut(s) 1240, 1506, 1653
BtsI GCAGTG 2 cut(s) 678, 1527
BtsIMutI CAGTG 4 cut(s) 678, 1271, 1414, 1527
Cac8I GCNNGC 5 cut(s) 455, 459, 701, 1116, 1257
Cfr13I GGNCC 3 cut(s) 326, 498, 1129
ClaI ATCGAT 1 cut(s) 1005
CsiI ACCWGGT 1 cut(s) 328
Csp6I GTAC 3 cut(s) 366, 371, 1664
CviAII CATG 7 cut(s) 43, 213, 621, 628, 806, 1256, 1557
CviQI GTAC 3 cut(s) 366, 371, 1664
DdeI CTNAG 2 cut(s) 710, 1110
EaeI YGGCCR 1 cut(s) 67
Eam1104I CTCTTC 2 cut(s) 353, 770
EarI CTCTTC 2 cut(s) 353, 770
Eco130I CCWWGG 2 cut(s) 229, 764
Eco31I GGTCTC 2 cut(s) 350, 442
Eco47I GGWCC 3 cut(s) 326, 498, 1129
Eco57I CTGAAG 1 cut(s) 1593
EcoO109I RGGNCCY 2 cut(s) 326, 498
EcoRI GAATTC 1 cut(s) 1073
EcoRII CCWGG 2 cut(s) 328, 1515
EcoT14I CCWWGG 2 cut(s) 229, 764
ErhI CCWWGG 2 cut(s) 229, 764
Esp3I CGTCTC 1 cut(s) 1381
FaeI CATG 7 cut(s) 46, 216, 624, 631, 809, 1259, 1560
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 2 cut(s) 425, 511
FatI CATG 7 cut(s) 42, 212, 620, 627, 805, 1255, 1556
FauNDI CATATG 2 cut(s) 199, 790
FbaI TGATCA 1 cut(s) 916
Fnu4HI GCNGC 5 cut(s) 314, 618, 1119, 1269, 1302
FokI GGATG 3 cut(s) 1247, 1493, 1660
Fsp4HI GCNGC 5 cut(s) 314, 618, 1119, 1269, 1302
FspBI CTAG 3 cut(s) 47, 458, 509
GluI GCNGC 5 cut(s) 314, 618, 1119, 1269, 1302
GsuI CTGGAG 2 cut(s) 606, 1390
HaeIII GGCC 2 cut(s) 69, 1469
HapII CCGG 1 cut(s) 1441
Hin1II CATG 7 cut(s) 46, 216, 624, 631, 809, 1259, 1560
HincII GTYRAC 1 cut(s) 1336
HindII GTYRAC 1 cut(s) 1336
HinfI GANTC 5 cut(s) 307, 769, 820, 972, 1052
HpaII CCGG 1 cut(s) 1441
HphI GGTGA 1 cut(s) 884
Hpy166II GTNNAC 4 cut(s) 121, 716, 1336, 1422
Hpy188I TCNGA 9 cut(s) 112, 181, 691, 774, 817, 921, 1215, 1554, 1573
Hpy188III TCNNGA 5 cut(s) 399, 585, 907, 1049, 1703
Hpy8I GTNNAC 4 cut(s) 121, 716, 1336, 1422
HpyCH4III ACNGT 4 cut(s) 226, 370, 831, 1133
HpyCH4IV ACGT 1 cut(s) 990
HpyF10VI GCNNNNNNNGC 5 cut(s) 1115, 1265, 1310, 1466, 1475
HpyF3I CTNAG 2 cut(s) 710, 1110
HpySE526I ACGT 1 cut(s) 990
Hsp92II CATG 7 cut(s) 46, 216, 624, 631, 809, 1259, 1560
Ksp22I TGATCA 1 cut(s) 916
LmnI GCTCC 3 cut(s) 1147, 1409, 1560
Lsp1109I GCAGC 5 cut(s) 300, 604, 1105, 1280, 1288
LweI GCATC 6 cut(s) 185, 367, 404, 762, 1318, 1469
MabI ACCWGGT 1 cut(s) 328
MaeI CTAG 3 cut(s) 47, 458, 509
MaeII ACGT 1 cut(s) 990
MaeIII GTNAC 4 cut(s) 260, 521, 1492, 1502
MboII GAAGA 9 cut(s) 232, 340, 497, 787, 792, 1069, 1202, 1363, 1456
MflI RGATCY 3 cut(s) 464, 581, 956
MhlI GDGCHC 1 cut(s) 596
MlsI TGGCCA 1 cut(s) 69
MluNI TGGCCA 1 cut(s) 69
MmeI TCCRAC 2 cut(s) 424, 685
MnlI CCTC 6 cut(s) 254, 366, 678, 1225, 1270, 1520
Mox20I TGGCCA 1 cut(s) 69
MroXI GAANNNNTTC 1 cut(s) 902
MscI TGGCCA 1 cut(s) 69
MseI TTAA 6 cut(s) 51, 158, 575, 953, 1101, 1239
MslI CAYNNNNRTG 2 cut(s) 804, 1604
Msp20I TGGCCA 1 cut(s) 69
MspA1I CMGCKG 1 cut(s) 296
MspCI CTTAAG 1 cut(s) 952
MspI CCGG 1 cut(s) 1441
MspR9I CCNGG 2 cut(s) 330, 1517
Mva1269I GAATGC 2 cut(s) 1599, 1698
MvaI CCWGG 2 cut(s) 330, 1517
MwoI GCNNNNNNNGC 5 cut(s) 1115, 1265, 1310, 1466, 1475
NdeI CATATG 2 cut(s) 199, 790
NheI GCTAGC 1 cut(s) 457
NlaIII CATG 7 cut(s) 46, 216, 624, 631, 809, 1259, 1560
NlaIV GGNNCC 4 cut(s) 466, 499, 1143, 1291
NmuCI GTSAC 1 cut(s) 521
NspI RCATGY 2 cut(s) 809, 1259
NspV TTCGAA 1 cut(s) 1546
PaeI GCATGC 1 cut(s) 1259
PctI GAATGC 2 cut(s) 1599, 1698
PdmI GAANNNNTTC 1 cut(s) 902
PfeI GAWTC 5 cut(s) 307, 769, 820, 972, 1052
PkrI GCNGC 5 cut(s) 315, 619, 1120, 1270, 1303
PpuMI RGGWCCY 2 cut(s) 326, 498
PsiI TTATAA 1 cut(s) 1589
Psp5II RGGWCCY 2 cut(s) 326, 498
Psp6I CCWGG 2 cut(s) 328, 1515
PspGI CCWGG 2 cut(s) 328, 1515
PspN4I GGNNCC 4 cut(s) 466, 499, 1143, 1291
PspPI GGNCC 3 cut(s) 326, 498, 1129
PspPPI RGGWCCY 2 cut(s) 326, 498
PsuI RGATCY 3 cut(s) 464, 581, 956
PvuII CAGCTG 1 cut(s) 296
RsaI GTAC 3 cut(s) 367, 372, 1665
RsaNI GTAC 3 cut(s) 366, 371, 1664
RseI CAYNNNNRTG 2 cut(s) 804, 1604
SaqAI TTAA 6 cut(s) 51, 158, 575, 953, 1101, 1239
SatI GCNGC 5 cut(s) 314, 618, 1119, 1269, 1302
Sau96I GGNCC 3 cut(s) 326, 498, 1129
ScaI AGTACT 1 cut(s) 367
ScrFI CCNGG 2 cut(s) 330, 1517
SduI GDGCHC 1 cut(s) 596
SexAI ACCWGGT 1 cut(s) 328
SfaNI GCATC 6 cut(s) 185, 367, 404, 762, 1318, 1469
SfuI TTCGAA 1 cut(s) 1546
SinI GGWCC 3 cut(s) 326, 498, 1129
SmiMI CAYNNNNRTG 2 cut(s) 804, 1604
SmlI CTYRAG 3 cut(s) 669, 952, 1020
SmoI CTYRAG 3 cut(s) 669, 952, 1020
SphI GCATGC 1 cut(s) 1259
SsiI CCGC 2 cut(s) 1145, 1627
SspMI CTAG 3 cut(s) 47, 458, 509
StyD4I CCNGG 2 cut(s) 328, 1515
StyI CCWWGG 2 cut(s) 229, 764
TaaI ACNGT 4 cut(s) 226, 370, 831, 1133
TaiI ACGT 1 cut(s) 993
TaqI TCGA 3 cut(s) 926, 1005, 1546
TatI WGTACW 2 cut(s) 365, 1663
TfiI GAWTC 5 cut(s) 307, 769, 820, 972, 1052
Tru1I TTAA 6 cut(s) 51, 158, 575, 953, 1101, 1239
Tru9I TTAA 6 cut(s) 51, 158, 575, 953, 1101, 1239
TscAI CASTG 4 cut(s) 685, 1278, 1414, 1527
TseFI GTSAC 1 cut(s) 521
TseI GCWGC 5 cut(s) 313, 617, 1118, 1268, 1301
Tsp45I GTSAC 1 cut(s) 521
TspDTI ATGAA 4 cut(s) 564, 1023, 1086, 1169
TspGWI ACGGA 1 cut(s) 430
TspRI CASTG 4 cut(s) 685, 1278, 1414, 1527
Vha464I CTTAAG 1 cut(s) 952
VpaK11BI GGWCC 3 cut(s) 326, 498, 1129
XapI RAATTY 5 cut(s) 145, 318, 532, 1073, 1086
XceI RCATGY 2 cut(s) 809, 1259
XmnI GAANNNNTTC 1 cut(s) 902
XspI CTAG 3 cut(s) 47, 458, 509
ZrmI AGTACT 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.