Rh2CG614800

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000338
Physical Location & Seq
Forward (+)
79120803 .. 79127575
6773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG614800.1

Sequence Viewer

Length: 1794 bp
ATGGATGGAAATACATCTGGGGTAAACGGAAATAATGTTGACTGGGATACTGAAGATGAGCTTGACGAGATTGAAAATTTCACTTTATCTTCTTCTTCAGCTAATCTGGGCTCTGGGGAGGGGAGCTCATCTCCACGACCTTCCAATACCAAAGTTTTTGGTCATTTTGTCGGCATGGGATTTTCTCAAAAAATGGTTGCCAAGGCTATTCAGGAACATGGTGAGGAAGACGCCGATTCAATTCTGGAAAGCCTTCTCTTATATAGTGCTCTTGAAAATTCAACTCCAGAGCAGGATTCTCCACCAGAGCAGAGTTCTCCCCCAGAACAGTGCTTTCCTCCACAACAGCAACAAATCGATTCTGATCCCTTTTCTTCAGATTATGAGGGGAGCTTTCTGGATGGATTTTCAGATCTCGATAGCTCTGATAATGAGGAAATTAGCATTCCTACATCTGAGGAGGAGAAAAAACTTGTGGCCTTGGTCAAAATGGGGTACCCAGAATTGGAGGCTTCAATCGCAATAGAAAGATGTGGTGTCGACTCATCCCTTGTTGATTTGACTGATTTCATATCAGCTGCTCAGTTTTCAAGGGCAGAAGATGCCCATTTTCCCCTTGAAGAGAAGCCTAGACGTCTTCACATTGATGACAAGAAGAAAAGGAAACTTTGTGAATATGCCATGTCGAAAAGAAAAAAGAAGGTGGGGCTTGGAAATGGGATCATTGAGGAAGATGATGAGGCACTTCATCTCCCAAATCCAATGATTGGATTCGGAACTCCAACACATCTTTGTCAAATCCACAGGAGTATTCCAGAGGCAGCCACAGGACCTCCTTATTTCTACTATGAAAATGTGGCATTGACTCCTAAAGGGGTTTGGAACACAATATCCCGATTTCTCTATGATATCCAGCCTGAATTTGTTGATTCCAAGTACTTCTGTGCGGCTGCTAGGAAAAGAGGTTATGTTCATAATCTCCCAATAGAGAACAGGTTTCCTCTCATTCCCCTTCCACCGCAGACTATTTTTGATGCATTTCCCATGACAAGGAGATGGTGGCCTAGTTGGGACGAGCGCAGACAGCTGAATTGCCTACAGACTTGCATTGCTAGTGCAAAGTTGACTGAGAGGATCAGGCTGGCTCTTAAGGATTACGATGAAGATGAGATTCCACCAGAAAGAGTCCGACGGTATGTTCTATATGAATGCCGCAAGTGGAATCTTGTGTGGGTAGGAAAGAACAAGGTTGCCCCATTGGAGCCTGATGAGGTGGAAACACTTTTGGGGTTTCCGAGGAACCATACAAGGGGAATAAGTAGGACCGATAGATACAAGTCACTCGGGAATTCATTCCAGATTGATACAGTAGCCTATCATCTCTCTGTGTTGAAAGATCGGTTCCCCAATGGCATCAATCTCCTCTCTCTTTTCTCTGGAATTGGAGGTGCAGAGATAGCCCTCCATCGGCTTGGAATTCGAATGAAGAATGTTGTGTCTGTTGAGATTTCAGCGGTGAGCAGAACTGTTGTGAGGACTTGGTGGGAGCAAACCAACCAAAAGGGAAACTTGTATCACCTTGCTGATGTGCAGGAGTTGAATGCTGACCGGTTGGAGCATTACATCAATACCTTTGGTGGGTTTGATCTCGTGGTTGGTGGGAGCCCGTGCAACAATCTTGCCGGTAGCAACAGACATCATAGGGATGGGCTTGAGGGAAAAGAATCTTCTCTATTTTATGATTATTTCCGTATATTAGACTTAGTGAAGGGTCTTATGGCAAGACATAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

597

Amino Acids

67.41

Weight (kDa)

5.19

Isoelectric Point (pI)

51.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_methylase PF00145 473 - 587 1.6e-09 C-5 cytosine-specific DNA methylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 637
Acc65I GGTACC 1 cut(s) 495
AccB1I GGYRCC 1 cut(s) 495
AccB7I CCANNNNNTGG 1 cut(s) 767
AccI GTMKAC 1 cut(s) 540
AciI CCGC 4 cut(s) 947, 1019, 1213, 1514
AclWI GGATC 3 cut(s) 359, 728, 1142
AcsI RAATTY 5 cut(s) 76, 277, 920, 1348, 1476
AcuI CTGAAG 3 cut(s) 72, 81, 360
AcyI GRCGYC 2 cut(s) 231, 634
AfaI GTAC 2 cut(s) 497, 938
AfiI CCNNNNNNNGG 6 cut(s) 505, 767, 1050, 1309, 1467, 1638
AflII CTTAAG 1 cut(s) 1148
AgeI ACCGGT 1 cut(s) 1608
AgsI TTSAA 9 cut(s) 74, 240, 275, 282, 516, 591, 620, 1393, 1600
AloI GAACNNNNNNTCC 2 cut(s) 875, 907
AluBI AGCT 8 cut(s) 61, 101, 126, 393, 423, 578, 1087, 1791
AluI AGCT 8 cut(s) 61, 101, 126, 393, 423, 578, 1087, 1791
Alw21I GWGCWC 2 cut(s) 128, 271
AlwI GGATC 3 cut(s) 359, 728, 1142
Ama87I CYCGRG 1 cut(s) 1343
AoxI GGCC 2 cut(s) 477, 1061
ApeKI GCWGC 3 cut(s) 578, 821, 950
ApoI RAATTY 5 cut(s) 76, 277, 920, 1348, 1476
AsiGI ACCGGT 1 cut(s) 1608
Asp700I GAANNNNTTC 2 cut(s) 252, 1352
Asp718I GGTACC 1 cut(s) 495
AspLEI GCGC 1 cut(s) 1080
AspS9I GGNCC 2 cut(s) 830, 1323
AsuHPI GGTGA 3 cut(s) 233, 1528, 1568
AsuII TTCGAA 1 cut(s) 1480
AvaI CYCGRG 1 cut(s) 1343
AvaII GGWCC 2 cut(s) 830, 1323
BanI GGYRCC 1 cut(s) 495
BanII GRGCYC 3 cut(s) 113, 128, 1667
BauI CACGAG 1 cut(s) 1649
BbsI GAAGAC 2 cut(s) 234, 629
Bbv12I GWGCWC 2 cut(s) 128, 271
BbvI GCAGC 3 cut(s) 565, 833, 937
BccI CCATC 4 cut(s) 395, 1050, 1473, 1700
BciVI GTATCC 1 cut(s) 40
BfaI CTAG 4 cut(s) 630, 954, 1065, 1113
BfmI CTRYAG 1 cut(s) 1097
BfrI CTTAAG 1 cut(s) 1148
BfuI GTATCC 1 cut(s) 40
BglII AGATCT 1 cut(s) 412
BisI GCNGC 5 cut(s) 579, 822, 948, 951, 1213
BlsI GCNGC 5 cut(s) 580, 823, 949, 952, 1214
BmcAI AGTACT 1 cut(s) 938
Bme18I GGWCC 2 cut(s) 830, 1323
BmeT110I CYCGRG 1 cut(s) 1343
BmgT120I GGNCC 2 cut(s) 830, 1323
BmiI GGNNCC 5 cut(s) 497, 1263, 1301, 1403, 1664
BmrI ACTGGG 1 cut(s) 52
BmsI GCATC 3 cut(s) 592, 1024, 1422
BmuI ACTGGG 1 cut(s) 52
BpiI GAAGAC 2 cut(s) 234, 629
BplI GAGNNNNNCTC 4 cut(s) 110, 142, 115, 147
BpmI CTGGAG 1 cut(s) 270
Bpu14I TTCGAA 1 cut(s) 1480
BpuEI CTTGAG 1 cut(s) 1733
Bsa29I ATCGAT 1 cut(s) 357
BsaBI GATNNNNATC 1 cut(s) 363
BsaHI GRCGYC 2 cut(s) 231, 634
BsaJI CCNNGG 3 cut(s) 201, 480, 1295
BsaWI WCCGGW 1 cut(s) 1608
BsaXI ACNNNNNCTCC 4 cut(s) 735, 765, 817, 847
Bsc4I CCNNNNNNNGG 6 cut(s) 505, 767, 1050, 1309, 1467, 1638
Bse118I RCCGGY 2 cut(s) 1608, 1682
Bse1I ACTGG 1 cut(s) 47
Bse3DI GCAATG 1 cut(s) 1107
Bse8I GATNNNNATC 1 cut(s) 363
BseCI ATCGAT 1 cut(s) 357
BseDI CCNNGG 3 cut(s) 201, 480, 1295
BseGI GGATG 4 cut(s) 10, 406, 545, 1711
BseJI GATNNNNATC 1 cut(s) 363
BseLI CCNNNNNNNGG 6 cut(s) 505, 767, 1050, 1309, 1467, 1638
BseMI GCAATG 1 cut(s) 1107
BseMII CTCAG 3 cut(s) 447, 596, 1119
BseNI ACTGG 1 cut(s) 47
BseRI GAGGAG 3 cut(s) 473, 476, 1412
BseXI GCAGC 3 cut(s) 565, 833, 937
BsgI GTGCAG 2 cut(s) 1470, 1610
BshFI GGCC 2 cut(s) 479, 1063
BshNI GGYRCC 1 cut(s) 495
BshTI ACCGGT 1 cut(s) 1608
BshVI ATCGAT 1 cut(s) 357
BsiHKAI GWGCWC 2 cut(s) 128, 271
BsiHKCI CYCGRG 1 cut(s) 1343
BsiSI CCGG 2 cut(s) 1609, 1683
BslFI GGGAC 1 cut(s) 1085
BslI CCNNNNNNNGG 6 cut(s) 505, 767, 1050, 1309, 1467, 1638
BsmFI GGGAC 1 cut(s) 1085
BsmI GAATGC 3 cut(s) 444, 1214, 1606
BsnI GGCC 2 cut(s) 479, 1063
BsoBI CYCGRG 1 cut(s) 1343
Bsp119I TTCGAA 1 cut(s) 1480
Bsp1286I GDGCHC 4 cut(s) 113, 128, 271, 1667
Bsp143I GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
BspACI CCGC 4 cut(s) 947, 1019, 1213, 1514
BspANI GGCC 2 cut(s) 479, 1063
BspCNI CTCAG 3 cut(s) 448, 595, 1120
BspDI ATCGAT 1 cut(s) 357
BspLI GGNNCC 5 cut(s) 497, 1263, 1301, 1403, 1664
BspPI GGATC 3 cut(s) 359, 728, 1142
BspT104I TTCGAA 1 cut(s) 1480
BspT107I GGYRCC 1 cut(s) 495
BspTI CTTAAG 1 cut(s) 1148
BsrDI GCAATG 1 cut(s) 1107
BsrFI RCCGGY 2 cut(s) 1608, 1682
BsrI ACTGG 1 cut(s) 47
BssAI RCCGGY 2 cut(s) 1608, 1682
BssECI CCNNGG 3 cut(s) 201, 480, 1295
BssMI GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
BssNI GRCGYC 2 cut(s) 231, 634
BssSI CACGAG 1 cut(s) 1649
BssT1I CCWWGG 2 cut(s) 201, 480
Bst2BI CACGAG 1 cut(s) 1649
Bst4CI ACNGT 4 cut(s) 330, 1194, 1369, 1528
Bst6I CTCTTC 1 cut(s) 615
BstACI GRCGYC 2 cut(s) 231, 634
BstAFI CTTAAG 1 cut(s) 1148
BstAPI GCANNNNNTGC 1 cut(s) 602
BstBI TTCGAA 1 cut(s) 1480
BstC8I GCNNGC 1 cut(s) 1143
BstDEI CTNAG 4 cut(s) 456, 582, 1128, 1762
BstF5I GGATG 4 cut(s) 10, 406, 545, 1711
BstHHI GCGC 1 cut(s) 1080
BstKTI GATC 6 cut(s) 367, 415, 723, 1137, 1399, 1648
BstMBI GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
BstMWI GCNNNNNNNGC 4 cut(s) 518, 602, 1084, 1457
BstSFI CTRYAG 1 cut(s) 1097
BstV1I GCAGC 3 cut(s) 565, 833, 937
BstV2I GAAGAC 2 cut(s) 234, 629
BstX2I RGATCY 1 cut(s) 412
BstXI CCANNNNNNTGG 1 cut(s) 1472
BstYI RGATCY 1 cut(s) 412
Bsu15I ATCGAT 1 cut(s) 357
BsuI GTATCC 1 cut(s) 40
BsuRI GGCC 2 cut(s) 479, 1063
BsuTUI ATCGAT 1 cut(s) 357
BtsCI GGATG 4 cut(s) 10, 406, 545, 1711
BtsIMutI CAGTG 1 cut(s) 335
Cac8I GCNNGC 1 cut(s) 1143
CfoI GCGC 1 cut(s) 1080
Cfr10I RCCGGY 2 cut(s) 1608, 1682
Cfr13I GGNCC 2 cut(s) 830, 1323
ClaI ATCGAT 1 cut(s) 357
CseI GACGC 1 cut(s) 239
Csp6I GTAC 2 cut(s) 496, 937
CspAI ACCGGT 1 cut(s) 1608
CviAII CATG 4 cut(s) 175, 218, 682, 1045
CviQI GTAC 2 cut(s) 496, 937
DdeI CTNAG 4 cut(s) 456, 582, 1128, 1762
DpnI GATC 6 cut(s) 366, 414, 722, 1136, 1398, 1647
DpnII GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Ecl136II GAGCTC 1 cut(s) 126
Eco130I CCWWGG 2 cut(s) 201, 480
Eco24I GRGCYC 3 cut(s) 113, 128, 1667
Eco32I GATATC 1 cut(s) 910
Eco47I GGWCC 2 cut(s) 830, 1323
Eco53kI GAGCTC 1 cut(s) 126
Eco57I CTGAAG 3 cut(s) 72, 81, 360
Eco88I CYCGRG 1 cut(s) 1343
EcoICRI GAGCTC 1 cut(s) 126
EcoO109I RGGNCCY 1 cut(s) 830
EcoRI GAATTC 2 cut(s) 1348, 1476
EcoRV GATATC 1 cut(s) 910
EcoT14I CCWWGG 2 cut(s) 201, 480
EcoT22I ATGCAT 1 cut(s) 1039
EcoT38I GRGCYC 3 cut(s) 113, 128, 1667
ErhI CCWWGG 2 cut(s) 201, 480
FaeI CATG 4 cut(s) 178, 221, 685, 1048
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 1553, 1585
FaqI GGGAC 1 cut(s) 1085
FatI CATG 4 cut(s) 174, 217, 681, 1044
FblI GTMKAC 1 cut(s) 540
Fnu4HI GCNGC 5 cut(s) 579, 822, 948, 951, 1213
FokI GGATG 4 cut(s) 17, 413, 532, 1718
FriOI GRGCYC 3 cut(s) 113, 128, 1667
Fsp4HI GCNGC 5 cut(s) 579, 822, 948, 951, 1213
FspBI CTAG 4 cut(s) 630, 954, 1065, 1113
GlaI GCGC 1 cut(s) 1079
GluI GCNGC 5 cut(s) 579, 822, 948, 951, 1213
GsuI CTGGAG 1 cut(s) 270
HaeIII GGCC 2 cut(s) 479, 1063
HapII CCGG 2 cut(s) 1609, 1683
HgaI GACGC 1 cut(s) 239
HhaI GCGC 1 cut(s) 1080
Hin1I GRCGYC 2 cut(s) 231, 634
Hin1II CATG 4 cut(s) 178, 221, 685, 1048
Hin6I GCGC 1 cut(s) 1078
HinP1I GCGC 1 cut(s) 1078
HincII GTYRAC 3 cut(s) 40, 541, 1125
HindII GTYRAC 3 cut(s) 40, 541, 1125
HpaII CCGG 2 cut(s) 1609, 1683
HphI GGTGA 3 cut(s) 233, 1528, 1568
Hpy166II GTNNAC 4 cut(s) 25, 40, 541, 1125
Hpy188I TCNGA 8 cut(s) 364, 379, 412, 427, 457, 776, 1190, 1296
Hpy8I GTNNAC 4 cut(s) 25, 40, 541, 1125
Hpy99I CGWCG 1 cut(s) 1194
HpyAV CCTTC 5 cut(s) 150, 263, 694, 1022, 1762
HpyCH4III ACNGT 4 cut(s) 330, 1194, 1369, 1528
HpyCH4IV ACGT 1 cut(s) 634
HpyCH4V TGCA 6 cut(s) 1037, 1107, 1118, 1451, 1591, 1671
HpyF10VI GCNNNNNNNGC 4 cut(s) 518, 602, 1084, 1457
HpyF3I CTNAG 4 cut(s) 456, 582, 1128, 1762
HpySE526I ACGT 1 cut(s) 634
Hsp92I GRCGYC 2 cut(s) 231, 634
Hsp92II CATG 4 cut(s) 178, 221, 685, 1048
HspAI GCGC 1 cut(s) 1078
KpnI GGTACC 1 cut(s) 499
Kzo9I GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
LmnI GCTCC 6 cut(s) 123, 390, 1261, 1546, 1615, 1662
Lsp1109I GCAGC 3 cut(s) 565, 833, 937
LweI GCATC 3 cut(s) 592, 1024, 1422
MaeI CTAG 4 cut(s) 630, 954, 1065, 1113
MaeII ACGT 1 cut(s) 634
MaeIII GTNAC 1 cut(s) 1338
MalI GATC 6 cut(s) 366, 414, 722, 1136, 1398, 1647
MboI GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
MflI RGATCY 1 cut(s) 412
MhlI GDGCHC 4 cut(s) 113, 128, 271, 1667
MlyI GAGTC 3 cut(s) 536, 859, 1194
MmeI TCCRAC 3 cut(s) 806, 1213, 1593
Mph1103I ATGCAT 1 cut(s) 1039
MroXI GAANNNNTTC 2 cut(s) 252, 1352
MseI TTAA 1 cut(s) 1149
MslI CAYNNNNRTG 2 cut(s) 645, 1704
MspA1I CMGCKG 3 cut(s) 578, 1087, 1514
MspCI CTTAAG 1 cut(s) 1148
MspI CCGG 2 cut(s) 1609, 1683
Mva1269I GAATGC 3 cut(s) 444, 1214, 1606
MwoI GCNNNNNNNGC 4 cut(s) 518, 602, 1084, 1457
NdeII GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
NlaIII CATG 4 cut(s) 178, 221, 685, 1048
NlaIV GGNNCC 5 cut(s) 497, 1263, 1301, 1403, 1664
NmuCI GTSAC 1 cut(s) 1338
NsiI ATGCAT 1 cut(s) 1039
NspV TTCGAA 1 cut(s) 1480
PctI GAATGC 3 cut(s) 444, 1214, 1606
PdmI GAANNNNTTC 2 cut(s) 252, 1352
PfeI GAWTC 8 cut(s) 236, 296, 359, 771, 929, 1171, 1222, 1724
PflMI CCANNNNNTGG 1 cut(s) 767
PinAI ACCGGT 1 cut(s) 1608
PkrI GCNGC 5 cut(s) 580, 823, 949, 952, 1214
PleI GAGTC 3 cut(s) 536, 859, 1193
PpsI GAGTC 3 cut(s) 536, 859, 1193
PpuMI RGGWCCY 1 cut(s) 830
Psp124BI GAGCTC 1 cut(s) 128
Psp5II RGGWCCY 1 cut(s) 830
PspN4I GGNNCC 5 cut(s) 497, 1263, 1301, 1403, 1664
PspPI GGNCC 2 cut(s) 830, 1323
PspPPI RGGWCCY 1 cut(s) 830
PsuI RGATCY 1 cut(s) 412
PvuII CAGCTG 2 cut(s) 578, 1087
RsaI GTAC 2 cut(s) 497, 938
RsaNI GTAC 2 cut(s) 496, 937
RseI CAYNNNNRTG 2 cut(s) 645, 1704
SacI GAGCTC 1 cut(s) 128
SalI GTCGAC 1 cut(s) 539
SaqAI TTAA 1 cut(s) 1149
SatI GCNGC 5 cut(s) 579, 822, 948, 951, 1213
Sau3AI GATC 6 cut(s) 364, 412, 720, 1134, 1396, 1645
Sau96I GGNCC 2 cut(s) 830, 1323
ScaI AGTACT 1 cut(s) 938
SchI GAGTC 3 cut(s) 536, 859, 1194
SduI GDGCHC 4 cut(s) 113, 128, 271, 1667
SfaNI GCATC 3 cut(s) 592, 1024, 1422
SfcI CTRYAG 1 cut(s) 1097
SfuI TTCGAA 1 cut(s) 1480
SinI GGWCC 2 cut(s) 830, 1323
SmiMI CAYNNNNRTG 2 cut(s) 645, 1704
SmlI CTYRAG 2 cut(s) 1148, 1712
SmoI CTYRAG 2 cut(s) 1148, 1712
SsiI CCGC 4 cut(s) 947, 1019, 1213, 1514
SspMI CTAG 4 cut(s) 630, 954, 1065, 1113
SstI GAGCTC 1 cut(s) 128
StyI CCWWGG 2 cut(s) 201, 480
TaaI ACNGT 4 cut(s) 330, 1194, 1369, 1528
TaiI ACGT 1 cut(s) 637
TaqI TCGA 5 cut(s) 357, 417, 540, 686, 1480
TaqII GACCGA 1 cut(s) 1340
TatI WGTACW 1 cut(s) 936
TauI GCSGC 2 cut(s) 950, 1215
TfiI GAWTC 8 cut(s) 236, 296, 359, 771, 929, 1171, 1222, 1724
Tru1I TTAA 1 cut(s) 1149
Tru9I TTAA 1 cut(s) 1149
TscAI CASTG 1 cut(s) 335
TseFI GTSAC 1 cut(s) 1338
TseI GCWGC 3 cut(s) 578, 821, 950
Tsp45I GTSAC 1 cut(s) 1338
TspDTI ATGAA 8 cut(s) 559, 737, 864, 962, 1176, 1221, 1341, 1499
TspGWI ACGGA 2 cut(s) 42, 1739
TspRI CASTG 1 cut(s) 335
Van91I CCANNNNNTGG 1 cut(s) 767
Vha464I CTTAAG 1 cut(s) 1148
VpaK11BI GGWCC 2 cut(s) 830, 1323
XapI RAATTY 5 cut(s) 76, 277, 920, 1348, 1476
XmiI GTMKAC 1 cut(s) 540
XmnI GAANNNNTTC 2 cut(s) 252, 1352
XspI CTAG 4 cut(s) 630, 954, 1065, 1113
ZraI GACGTC 1 cut(s) 635
ZrmI AGTACT 1 cut(s) 938
Zsp2I ATGCAT 1 cut(s) 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.