DNA (cytosine-5)-methyltransferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 51 |
| AccB1I | GGYRCC | 1 cut(s) | 1275 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 572 |
| AciI | CCGC | 6 cut(s) | 287, 360, 700, 1189, 1218, 1262 |
| AclWI | GGATC | 3 cut(s) | 198, 266, 896 |
| AcsI | RAATTY | 2 cut(s) | 411, 801 |
| AcuI | CTGAAG | 1 cut(s) | 186 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AfaI | GTAC | 2 cut(s) | 56, 323 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 572, 1218 |
| AgsI | TTSAA | 5 cut(s) | 42, 342, 417, 1012, 1180 |
| AjiI | CACGTC | 1 cut(s) | 715 |
| AjnI | CCWGG | 1 cut(s) | 306 |
| AluBI | AGCT | 7 cut(s) | 219, 249, 404, 590, 841, 1079, 1090 |
| AluI | AGCT | 7 cut(s) | 219, 249, 404, 590, 841, 1079, 1090 |
| Alw21I | GWGCWC | 2 cut(s) | 161, 692 |
| Alw26I | GTCTC | 2 cut(s) | 284, 1311 |
| AlwI | GGATC | 3 cut(s) | 198, 266, 896 |
| AoxI | GGCC | 2 cut(s) | 420, 816 |
| ApeKI | GCWGC | 4 cut(s) | 404, 626, 752, 755 |
| ApoI | RAATTY | 2 cut(s) | 411, 801 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 287, 319 |
| AspS9I | GGNCC | 1 cut(s) | 635 |
| AsuHPI | GGTGA | 3 cut(s) | 989, 1148, 1243 |
| AvaII | GGWCC | 1 cut(s) | 635 |
| BanI | GGYRCC | 1 cut(s) | 1275 |
| BbsI | GAAGAC | 2 cut(s) | 30, 608 |
| Bbv12I | GWGCWC | 2 cut(s) | 161, 692 |
| BbvI | GCAGC | 4 cut(s) | 391, 638, 739, 742 |
| BccI | CCATC | 4 cut(s) | 206, 275, 431, 1280 |
| BciT130I | CCWGG | 1 cut(s) | 308 |
| BciVI | GTATCC | 2 cut(s) | 459, 1106 |
| BcoDI | GTCTC | 2 cut(s) | 284, 1311 |
| BfaI | CTAG | 3 cut(s) | 137, 224, 867 |
| BfuI | GTATCC | 2 cut(s) | 459, 1106 |
| BisI | GCNGC | 4 cut(s) | 405, 627, 753, 756 |
| BlsI | GCNGC | 4 cut(s) | 406, 628, 754, 757 |
| BmcAI | AGTACT | 1 cut(s) | 56 |
| Bme1390I | CCNGG | 1 cut(s) | 308 |
| Bme18I | GGWCC | 1 cut(s) | 635 |
| BmgBI | CACGTC | 1 cut(s) | 715 |
| BmgT120I | GGNCC | 1 cut(s) | 635 |
| BmiI | GGNNCC | 2 cut(s) | 966, 1277 |
| BmrFI | CCNGG | 1 cut(s) | 308 |
| BmrI | ACTGGG | 1 cut(s) | 832 |
| BmsI | GCATC | 3 cut(s) | 347, 529, 1041 |
| BmuI | ACTGGG | 1 cut(s) | 832 |
| BpiI | GAAGAC | 2 cut(s) | 30, 608 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 143, 175 |
| BpmI | CTGGAG | 2 cut(s) | 132, 570 |
| BpuEI | CTTGAG | 3 cut(s) | 49, 150, 1313 |
| Bsa29I | ATCGAT | 2 cut(s) | 270, 1018 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 306 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 622, 652 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 572, 1218 |
| Bse1I | ACTGG | 1 cut(s) | 827 |
| Bse3DI | GCAATG | 2 cut(s) | 485, 861 |
| BseBI | CCWGG | 1 cut(s) | 308 |
| BseCI | ATCGAT | 2 cut(s) | 270, 1018 |
| BseDI | CCNNGG | 1 cut(s) | 306 |
| BseGI | GGATG | 2 cut(s) | 832, 1291 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 572, 1218 |
| BseMI | GCAATG | 2 cut(s) | 485, 861 |
| BseMII | CTCAG | 4 cut(s) | 273, 444, 714, 873 |
| BseNI | ACTGG | 1 cut(s) | 827 |
| BseRI | GAGGAG | 2 cut(s) | 135, 153 |
| BseXI | GCAGC | 4 cut(s) | 391, 638, 739, 742 |
| BsgI | GTGCAG | 2 cut(s) | 567, 1089 |
| BshFI | GGCC | 2 cut(s) | 422, 818 |
| BshNI | GGYRCC | 1 cut(s) | 1275 |
| BshVI | ATCGAT | 2 cut(s) | 270, 1018 |
| BsiHKAI | GWGCWC | 2 cut(s) | 161, 692 |
| BslFI | GGGAC | 3 cut(s) | 289, 525, 595 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 572, 1218 |
| BsmAI | GTCTC | 2 cut(s) | 284, 1311 |
| BsmFI | GGGAC | 3 cut(s) | 289, 525, 595 |
| BsmI | GAATGC | 1 cut(s) | 1186 |
| BsnI | GGCC | 2 cut(s) | 422, 818 |
| Bsp1286I | GDGCHC | 2 cut(s) | 161, 692 |
| Bsp143I | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| BspACI | CCGC | 6 cut(s) | 287, 360, 700, 1189, 1218, 1262 |
| BspANI | GGCC | 2 cut(s) | 422, 818 |
| BspCNI | CTCAG | 4 cut(s) | 274, 445, 715, 874 |
| BspDI | ATCGAT | 2 cut(s) | 270, 1018 |
| BspHI | TCATGA | 1 cut(s) | 891 |
| BspLI | GGNNCC | 2 cut(s) | 966, 1277 |
| BspPI | GGATC | 3 cut(s) | 198, 266, 896 |
| BspT107I | GGYRCC | 1 cut(s) | 1275 |
| BsrDI | GCAATG | 2 cut(s) | 485, 861 |
| BsrI | ACTGG | 1 cut(s) | 827 |
| BssECI | CCNNGG | 1 cut(s) | 306 |
| BssMI | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| Bst2UI | CCWGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 2 cut(s) | 65, 988 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 6 cut(s) | 282, 453, 723, 738, 882, 1192 |
| BstEII | GGTNACC | 1 cut(s) | 262 |
| BstF5I | GGATG | 2 cut(s) | 832, 1291 |
| BstKTI | GATC | 7 cut(s) | 193, 274, 528, 595, 891, 1018, 1228 |
| BstMAI | GTCTC | 2 cut(s) | 284, 1311 |
| BstMBI | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 344, 1076 |
| BstNI | CCWGG | 1 cut(s) | 308 |
| BstPI | GGTNACC | 1 cut(s) | 262 |
| BstSCI | CCNGG | 1 cut(s) | 306 |
| BstV1I | GCAGC | 4 cut(s) | 391, 638, 739, 742 |
| BstV2I | GAAGAC | 2 cut(s) | 30, 608 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1286 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| Bsu15I | ATCGAT | 2 cut(s) | 270, 1018 |
| BsuI | GTATCC | 2 cut(s) | 459, 1106 |
| BsuRI | GGCC | 2 cut(s) | 422, 818 |
| BsuTUI | ATCGAT | 2 cut(s) | 270, 1018 |
| BtrI | CACGTC | 1 cut(s) | 715 |
| BtsCI | GGATG | 2 cut(s) | 832, 1291 |
| BtsI | GCAGTG | 1 cut(s) | 161 |
| BtsIMutI | CAGTG | 2 cut(s) | 161, 993 |
| CciI | TCATGA | 1 cut(s) | 891 |
| Cfr13I | GGNCC | 1 cut(s) | 635 |
| ClaI | ATCGAT | 2 cut(s) | 270, 1018 |
| Csp6I | GTAC | 2 cut(s) | 55, 322 |
| CviAII | CATG | 3 cut(s) | 515, 892, 1248 |
| CviQI | GTAC | 2 cut(s) | 55, 322 |
| DdeI | CTNAG | 6 cut(s) | 282, 453, 723, 738, 882, 1192 |
| DpnI | GATC | 7 cut(s) | 192, 273, 527, 594, 890, 1017, 1227 |
| DpnII | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| EciI | GGCGGA | 1 cut(s) | 302 |
| Eco47I | GGWCC | 1 cut(s) | 635 |
| Eco57I | CTGAAG | 1 cut(s) | 186 |
| Eco91I | GGTNACC | 1 cut(s) | 262 |
| EcoO109I | RGGNCCY | 1 cut(s) | 635 |
| EcoO65I | GGTNACC | 1 cut(s) | 262 |
| EcoRI | GAATTC | 1 cut(s) | 801 |
| EcoRII | CCWGG | 1 cut(s) | 306 |
| FaeI | CATG | 3 cut(s) | 518, 895, 1251 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 410, 442, 1293, 1325 |
| FaqI | GGGAC | 3 cut(s) | 289, 525, 595 |
| FatI | CATG | 3 cut(s) | 514, 891, 1247 |
| FauI | CCCGC | 3 cut(s) | 707, 1211, 1255 |
| Fnu4HI | GCNGC | 4 cut(s) | 405, 627, 753, 756 |
| FokI | GGATG | 2 cut(s) | 839, 1298 |
| Fsp4HI | GCNGC | 4 cut(s) | 405, 627, 753, 756 |
| FspBI | CTAG | 3 cut(s) | 137, 224, 867 |
| GluI | GCNGC | 4 cut(s) | 405, 627, 753, 756 |
| GsuI | CTGGAG | 2 cut(s) | 132, 570 |
| HaeIII | GGCC | 2 cut(s) | 422, 818 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| Hin1II | CATG | 3 cut(s) | 518, 895, 1251 |
| HinfI | GANTC | 7 cut(s) | 24, 140, 185, 479, 583, 670, 1304 |
| HphI | GGTGA | 3 cut(s) | 989, 1148, 1243 |
| Hpy188I | TCNGA | 8 cut(s) | 23, 190, 205, 238, 253, 283, 530, 978 |
| Hpy99I | CGWCG | 2 cut(s) | 53, 948 |
| HpyAV | CCTTC | 1 cut(s) | 889 |
| HpyCH4III | ACNGT | 2 cut(s) | 65, 988 |
| HpyCH4IV | ACGT | 2 cut(s) | 48, 714 |
| HpyCH4V | TGCA | 7 cut(s) | 548, 758, 778, 861, 872, 1070, 1171 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 344, 1076 |
| HpyF3I | CTNAG | 6 cut(s) | 282, 453, 723, 738, 882, 1192 |
| HpySE526I | ACGT | 2 cut(s) | 48, 714 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| Hsp92II | CATG | 3 cut(s) | 518, 895, 1251 |
| Kzo9I | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| LmnI | GCTCC | 2 cut(s) | 216, 687 |
| Lsp1109I | GCAGC | 4 cut(s) | 391, 638, 739, 742 |
| LweI | GCATC | 3 cut(s) | 347, 529, 1041 |
| MaeI | CTAG | 3 cut(s) | 137, 224, 867 |
| MaeII | ACGT | 2 cut(s) | 48, 714 |
| MaeIII | GTNAC | 3 cut(s) | 116, 262, 1250 |
| MalI | GATC | 7 cut(s) | 192, 273, 527, 594, 890, 1017, 1227 |
| MboI | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| MfeI | CAATTG | 1 cut(s) | 1366 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MhlI | GDGCHC | 2 cut(s) | 161, 692 |
| MluCI | AATT | 6 cut(s) | 329, 411, 801, 844, 876, 1366 |
| MlyI | GAGTC | 4 cut(s) | 179, 577, 664, 1313 |
| MseI | TTAA | 2 cut(s) | 312, 903 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1284 |
| MspA1I | CMGCKG | 2 cut(s) | 404, 590 |
| MspR9I | CCNGG | 1 cut(s) | 308 |
| MunI | CAATTG | 1 cut(s) | 1366 |
| Mva1269I | GAATGC | 1 cut(s) | 1186 |
| MvaI | CCWGG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 344, 1076 |
| NdeII | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| NlaIII | CATG | 3 cut(s) | 518, 895, 1251 |
| NlaIV | GGNNCC | 2 cut(s) | 966, 1277 |
| NmuCI | GTSAC | 1 cut(s) | 116 |
| PagI | TCATGA | 1 cut(s) | 891 |
| PctI | GAATGC | 1 cut(s) | 1186 |
| PfeI | GAWTC | 3 cut(s) | 24, 140, 479 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 572 |
| PkrI | GCNGC | 4 cut(s) | 406, 628, 754, 757 |
| PleI | GAGTC | 4 cut(s) | 179, 577, 664, 1312 |
| PpsI | GAGTC | 4 cut(s) | 179, 577, 664, 1312 |
| PpuMI | RGGWCCY | 1 cut(s) | 635 |
| Psp5II | RGGWCCY | 1 cut(s) | 635 |
| Psp6I | CCWGG | 1 cut(s) | 306 |
| PspEI | GGTNACC | 1 cut(s) | 262 |
| PspGI | CCWGG | 1 cut(s) | 306 |
| PspN4I | GGNNCC | 2 cut(s) | 966, 1277 |
| PspPI | GGNCC | 1 cut(s) | 635 |
| PspPPI | RGGWCCY | 1 cut(s) | 635 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| PvuII | CAGCTG | 2 cut(s) | 404, 590 |
| RsaI | GTAC | 2 cut(s) | 56, 323 |
| RsaNI | GTAC | 2 cut(s) | 55, 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1284 |
| SaqAI | TTAA | 2 cut(s) | 312, 903 |
| SatI | GCNGC | 4 cut(s) | 405, 627, 753, 756 |
| Sau3AI | GATC | 7 cut(s) | 190, 271, 525, 592, 888, 1015, 1225 |
| Sau96I | GGNCC | 1 cut(s) | 635 |
| ScaI | AGTACT | 1 cut(s) | 56 |
| SchI | GAGTC | 4 cut(s) | 179, 577, 664, 1313 |
| ScrFI | CCNGG | 1 cut(s) | 308 |
| SduI | GDGCHC | 2 cut(s) | 161, 692 |
| SfaNI | GCATC | 3 cut(s) | 347, 529, 1041 |
| SinI | GGWCC | 1 cut(s) | 635 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1284 |
| SmlI | CTYRAG | 3 cut(s) | 28, 165, 1292 |
| SmoI | CTYRAG | 3 cut(s) | 28, 165, 1292 |
| Sse9I | AATT | 6 cut(s) | 329, 411, 801, 844, 876, 1366 |
| SsiI | CCGC | 6 cut(s) | 287, 360, 700, 1189, 1218, 1262 |
| SspMI | CTAG | 3 cut(s) | 137, 224, 867 |
| StyD4I | CCNGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 2 cut(s) | 65, 988 |
| TaiI | ACGT | 2 cut(s) | 51, 717 |
| TaqI | TCGA | 3 cut(s) | 51, 270, 1018 |
| TasI | AATT | 6 cut(s) | 329, 411, 801, 844, 876, 1366 |
| TatI | WGTACW | 1 cut(s) | 54 |
| TfiI | GAWTC | 3 cut(s) | 24, 140, 479 |
| Tru1I | TTAA | 2 cut(s) | 312, 903 |
| Tru9I | TTAA | 2 cut(s) | 312, 903 |
| TscAI | CASTG | 2 cut(s) | 161, 993 |
| TseFI | GTSAC | 1 cut(s) | 116 |
| TseI | GCWGC | 4 cut(s) | 404, 626, 752, 755 |
| Tsp45I | GTSAC | 1 cut(s) | 116 |
| TspGWI | ACGGA | 1 cut(s) | 932 |
| TspRI | CASTG | 2 cut(s) | 161, 993 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 572 |
| VpaK11BI | GGWCC | 1 cut(s) | 635 |
| XapI | RAATTY | 2 cut(s) | 411, 801 |
| XbaI | TCTAGA | 2 cut(s) | 136, 223 |
| XspI | CTAG | 3 cut(s) | 137, 224, 867 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| ZrmI | AGTACT | 1 cut(s) | 56 |