Rorug02G0558900

DNA (cytosine-5)-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000338
Physical Location & Seq
Reverse (-)
68492299 .. 68493605
1307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0558900.1

Sequence Viewer

Length: 1194 bp
ATGAGTGGTGAAGGTTACACTACTGGTACACATGCAAGTATAATGTCATTTGGAGAGGCCTATGATGGTATACATCAATTGAAAAGATGCAAAAGATTACCAGCAAGAGCATCATCAAAATTCACTGATACTAGTATCGATGATCTCCCTGATTACCTGTTGGTTGAAATCCTATGTCGACTTCCTGACAATAAAATCTGCTTGCAATGCACATCTGTGTGCAGACGTTGGTGCTCTCTCATCTCTGATCCTCATTTTATTGGTCGCTTTCTTTGGCTCCAAAGGGATTTAGGGTCGCCAATAATTCGTACTTTGATAAACCACAATGCAGAGGAGTTCCCTACTAAAGATGTGTTTCAAAGACTCAGGAGTTTCCTCCGTCTGAAAGAAGATCCATTTGTACTAGCGACATGGAATGACTTGGTTTTGTGCTGTGCAAGCAAGGATGATCAACATGATTACTACATTTGCAATCCATACACCATGCAACTGGTTACTCTTCCTCCCATCCCTGCATGCCACAAATTTGTGCCAGTGGGATTCATATGCGAGCCCTACTATAATTATGAAGAGGAAGATGGTGATCATCGAAAAGAACAAAAGATCAATATTAATGGTGATTATAGGTGCAAGATTGTGAGAATAGTTCCTTCAGAAATAACTTGTTTTGACATTACCATTCAAGTCTTCTCTTCTGAGACCGGGGAATGGAGAGAGTCAGTTGTATCAACACCAGGAGACCTTTCCTCGTATATTTTTGATCGGAATATTAGCTTTGCTAACAATGGAATGATATATTGGAGCACTCATGATGGTGTGTACCAAGGATTTCTGCGCATGTGCGACTACAACTTTGACAATTATTGGCTGCTTGTTTGGGAGATGACTGAAGAAGAACATGAGCAGCTGGTTGTCAATGGACCTGGAAAATGTGGTTTGGAACATGTGAAACGTTATTCACTTCCCCCAAAAATGATTCCTGGTGATCCAGATGGGCATGTTGAATTGCTAACTTTTGACCCAAATAATGGTGATATCCTTTATCTACGCATAAATGGAGAAATCGTCAAGTGTAACATTCGTACAGGAAAGTGGTCAAAGATGGTTGGGACGAATATGCTAACTGATTTATACTTCTTCCAATTAGTGCTCCCGTGGTGGCCTACACCAGTTCCGAGACTACCAGATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003886 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006346 GO:0006355 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008757 GO:0009008 GO:0009605 GO:0009607 GO:0009620 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009750 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032776 GO:0034284 GO:0034285 GO:0034641 GO:0034968 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051704 GO:0051707 GO:0060255 GO:0061647 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090116 GO:0090304 GO:0098542 GO:0140097 GO:1901360 GO:1901564 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_methylase

Protein Analysis

397

Amino Acids

46.01

Weight (kDa)

5.34

Isoelectric Point (pI)

46.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 46 - 85 1.3e-07 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14620
fragaria_vesca FvH4_6g30300 FvH4_6g30450 FvH4_6g50980 FvH4_6g50980
malus_domestica MD09G1029900.v1.1 MD17G1031900.v1.1
prunus_persica Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.3G287400_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1 Prupe.8G038800_v2.0.a1
pyrus_communis pycom111g02390 pycom17g02950
rosa_chinensis RchiOBHm_Chr1g0321581 RchiOBHm_Chr1g0321601 RchiOBHm_Chr1g0322481 RchiOBHm_Chr1g0322501 RchiOBHm_Chr1g0322511 RchiOBHm_Chr1g0322631 RchiOBHm_Chr1g0322691 RchiOBHm_Chr1g0322751 RchiOBHm_Chr1g0323101 RchiOBHm_Chr1g0323111 RchiOBHm_Chr1g0328981 RchiOBHm_Chr1g0328991 RchiOBHm_Chr2g0136781 RchiOBHm_Chr2g0136791 RchiOBHm_Chr2g0136801 RchiOBHm_Chr2g0172381
rosa_laevigata RLG00000019575 RLG00000019577 RLG00000030366 RLG00000030370 RLG00000030377 RLG00000030379
rosa_multiflora Rmu_co8075278.1_g000001 Rmu_co8206584.1_g000001 Rmu_sc0000467.1_g000002 Rmu_sc0000467.1_g000007 Rmu_sc0001299.1_g000016 Rmu_sc0001932.1_g000013 Rmu_sc0002132.1_g000049 Rmu_sc0005093.1_g000002 Rmu_sc0005949.1_g000027 Rmu_sc0007485.1_g000011 Rmu_sc0007799.1_g000006 Rmu_sc0023751.1_g000001 Rmu_sc0039575.1_g000001
rosa_roxburghii Rroxscaffold_2G00107990 Rroxscaffold_2G00129580 Rroxscaffold_4G00326990
rosa_rugosa Rorug01G0034500 Rorug01G0035900 Rorug01G0036600 Rorug02G0268000 Rorug02G0333200 Rorug02G0333200 Rorug02G0333300 Rorug02G0333300 Rorug02G0333400 Rorug02G0333500 Rorug02G0333600 Rorug02G0333700 Rorug02G0333700 Rorug02G0333700 Rorug02G0558900 Rorug02G0559000 Rorug06G0043800 Rorug06G0044300
rosa_samantha Rh1AG051000 Rh1AG052400 Rh1AG052600 Rh1AG053200 Rh1AG053300 Rh1AG054000 Rh1BG046600 Rh1BG109100 Rh1CG048300 Rh1CG053000 Rh1CG053100 Rh1DG057000 Rh2AG384300 Rh2AG634100 Rh2BG390900 Rh2BG391000 Rh2BG647800 Rh2BG648200 Rh2CG370600 Rh2CG370800 Rh2CG614800 Rh2DG407600 Rh2DG407700 Rh2DG662800 Rh7BG379000
rosa_wichuraiana Rw1G004090 Rw1G004430 Rw2G031410 Rw2G031420 Rw2G052520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 836
AccB7I CCANNNNNTGG 1 cut(s) 1028
AccI GTMKAC 2 cut(s) 70, 178
AclI AACGTT 1 cut(s) 952
AclWI GGATC 3 cut(s) 242, 386, 980
AcsI RAATTY 2 cut(s) 119, 524
AcuI CTGAAG 2 cut(s) 636, 909
AfaI GTAC 5 cut(s) 28, 310, 402, 821, 1084
AfiI CCNNNNNNNGG 2 cut(s) 708, 1028
AflIII ACRYGT 1 cut(s) 943
AgsI TTSAA 5 cut(s) 82, 167, 359, 683, 1004
AhlI ACTAGT 1 cut(s) 131
AjnI CCWGG 3 cut(s) 733, 922, 979
AjuI GAANNNNNNNTTGG 2 cut(s) 781, 813
AleI CACNNNNGTG 1 cut(s) 215
AluBI AGCT 2 cut(s) 774, 907
AluI AGCT 2 cut(s) 774, 907
Alw21I GWGCWC 3 cut(s) 236, 806, 1152
Alw26I GTCTC 3 cut(s) 692, 732, 1171
AlwI GGATC 3 cut(s) 242, 386, 980
AoxI GGCC 2 cut(s) 57, 1160
ApeKI GCWGC 2 cut(s) 868, 904
ApoI RAATTY 2 cut(s) 119, 524
ArsI GACNNNNNNTTYG 2 cut(s) 836, 868
AseI ATTAAT 1 cut(s) 612
AspLEI GCGC 1 cut(s) 837
AspS9I GGNCC 1 cut(s) 920
AsuC2I CCSGG 1 cut(s) 703
AsuHPI GGTGA 5 cut(s) 20, 593, 629, 995, 1043
AvaII GGWCC 1 cut(s) 920
BanII GRGCYC 1 cut(s) 555
BbsI GAAGAC 1 cut(s) 679
Bbv12I GWGCWC 3 cut(s) 236, 806, 1152
BbvI GCAGC 2 cut(s) 855, 916
BccI CCATC 6 cut(s) 59, 515, 572, 806, 986, 1096
BciT130I CCWGG 3 cut(s) 735, 924, 981
BclI TGATCA 2 cut(s) 448, 583
BcnI CCSGG 1 cut(s) 703
BcoDI GTCTC 3 cut(s) 692, 732, 1171
BcuI ACTAGT 1 cut(s) 131
BfaI CTAG 2 cut(s) 132, 404
BisI GCNGC 2 cut(s) 869, 905
BlsI GCNGC 2 cut(s) 870, 906
Bme1390I CCNGG 4 cut(s) 703, 735, 924, 981
Bme18I GGWCC 1 cut(s) 920
BmgT120I GGNCC 1 cut(s) 920
BmiI GGNNCC 1 cut(s) 278
BmrFI CCNGG 4 cut(s) 703, 735, 924, 981
BmsI GCATC 2 cut(s) 77, 119
BpiI GAAGAC 1 cut(s) 679
BpuMI CCSGG 1 cut(s) 703
Bsa29I ATCGAT 1 cut(s) 138
BsaBI GATNNNNATC 1 cut(s) 582
BsaI GGTCTC 2 cut(s) 692, 732
BsaJI CCNNGG 3 cut(s) 702, 823, 1154
BsaXI ACNNNNNCTCC 4 cut(s) 487, 517, 1050, 1080
Bsc4I CCNNNNNNNGG 2 cut(s) 708, 1028
Bse1I ACTGG 4 cut(s) 28, 495, 533, 1169
Bse3DI GCAATG 1 cut(s) 212
Bse8I GATNNNNATC 1 cut(s) 582
BseBI CCWGG 3 cut(s) 735, 924, 981
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 3 cut(s) 702, 823, 1154
BseGI GGATG 2 cut(s) 451, 507
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 2 cut(s) 708, 1028
BseMI GCAATG 1 cut(s) 212
BseMII CTCAG 2 cut(s) 379, 687
BseNI ACTGG 4 cut(s) 28, 495, 533, 1169
BseRI GAGGAG 1 cut(s) 347
BseXI GCAGC 2 cut(s) 855, 916
BsgI GTGCAG 1 cut(s) 241
BshFI GGCC 2 cut(s) 59, 1162
BshVI ATCGAT 1 cut(s) 138
BsiHKAI GWGCWC 3 cut(s) 236, 806, 1152
BsiSI CCGG 1 cut(s) 702
BslFI GGGAC 1 cut(s) 1123
BslI CCNNNNNNNGG 2 cut(s) 708, 1028
BsmAI GTCTC 3 cut(s) 692, 732, 1171
BsmFI GGGAC 1 cut(s) 1123
BsnI GGCC 2 cut(s) 59, 1162
Bso31I GGTCTC 2 cut(s) 692, 732
Bsp1286I GDGCHC 4 cut(s) 236, 555, 806, 1152
Bsp143I GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
BspANI GGCC 2 cut(s) 59, 1162
BspCNI CTCAG 2 cut(s) 378, 688
BspDI ATCGAT 1 cut(s) 138
BspHI TCATGA 1 cut(s) 808
BspLI GGNNCC 1 cut(s) 278
BspPI GGATC 3 cut(s) 242, 386, 980
BspTNI GGTCTC 2 cut(s) 692, 732
BsrDI GCAATG 1 cut(s) 212
BsrI ACTGG 4 cut(s) 28, 495, 533, 1169
BssECI CCNNGG 3 cut(s) 702, 823, 1154
BssMI GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
BssNAI GTATAC 1 cut(s) 71
BssT1I CCWWGG 1 cut(s) 823
Bst1107I GTATAC 1 cut(s) 71
Bst2UI CCWGG 3 cut(s) 735, 924, 981
Bst6I CTCTTC 3 cut(s) 504, 564, 697
BstC8I GCNNGC 4 cut(s) 203, 439, 517, 551
BstDEI CTNAG 2 cut(s) 365, 696
BstDSI CCRYGG 1 cut(s) 1154
BstF5I GGATG 2 cut(s) 451, 507
BstHHI GCGC 1 cut(s) 837
BstKTI GATC 8 cut(s) 145, 250, 394, 451, 586, 606, 763, 988
BstMAI GTCTC 3 cut(s) 692, 732, 1171
BstMBI GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
BstMWI GCNNNNNNNGC 2 cut(s) 207, 438
BstNI CCWGG 3 cut(s) 735, 924, 981
BstNSI RCATGY 5 cut(s) 35, 519, 841, 947, 1001
BstSCI CCNGG 4 cut(s) 701, 733, 922, 979
BstV1I GCAGC 2 cut(s) 855, 916
BstV2I GAAGAC 1 cut(s) 679
BstX2I RGATCY 1 cut(s) 391
BstXI CCANNNNNNTGG 1 cut(s) 490
BstYI RGATCY 1 cut(s) 391
BstZ17I GTATAC 1 cut(s) 71
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 2 cut(s) 59, 1162
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 1 cut(s) 1154
BtsCI GGATG 2 cut(s) 451, 507
BtsIMutI CAGTG 2 cut(s) 123, 540
Cac8I GCNNGC 4 cut(s) 203, 439, 517, 551
CciI TCATGA 1 cut(s) 808
CfoI GCGC 1 cut(s) 837
Cfr13I GGNCC 1 cut(s) 920
ClaI ATCGAT 1 cut(s) 138
Csp6I GTAC 5 cut(s) 27, 309, 401, 820, 1083
CviJI RGCY 7 cut(s) 59, 277, 553, 774, 868, 907, 1162
CviKI_1 RGCY 7 cut(s) 59, 277, 553, 774, 868, 907, 1162
CviQI GTAC 5 cut(s) 27, 309, 401, 820, 1083
DdeI CTNAG 2 cut(s) 365, 696
DpnI GATC 8 cut(s) 144, 249, 393, 450, 585, 605, 762, 987
DpnII GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
Eam1104I CTCTTC 3 cut(s) 504, 564, 697
EarI CTCTTC 3 cut(s) 504, 564, 697
Eco130I CCWWGG 1 cut(s) 823
Eco147I AGGCCT 1 cut(s) 59
Eco24I GRGCYC 1 cut(s) 555
Eco31I GGTCTC 2 cut(s) 692, 732
Eco32I GATATC 1 cut(s) 1036
Eco47I GGWCC 1 cut(s) 920
Eco57I CTGAAG 2 cut(s) 636, 909
EcoRII CCWGG 3 cut(s) 733, 922, 979
EcoRV GATATC 1 cut(s) 1036
EcoT14I CCWWGG 1 cut(s) 823
EcoT38I GRGCYC 1 cut(s) 555
ErhI CCWWGG 1 cut(s) 823
FaqI GGGAC 1 cut(s) 1123
FauNDI CATATG 1 cut(s) 545
FbaI TGATCA 2 cut(s) 448, 583
FblI GTMKAC 2 cut(s) 70, 178
Fnu4HI GCNGC 2 cut(s) 869, 905
FokI GGATG 2 cut(s) 458, 494
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 2 cut(s) 869, 905
FspBI CTAG 2 cut(s) 132, 404
FspI TGCGCA 1 cut(s) 836
GlaI GCGC 1 cut(s) 836
GluI GCNGC 2 cut(s) 869, 905
HaeIII GGCC 2 cut(s) 59, 1162
HapII CCGG 1 cut(s) 702
HhaI GCGC 1 cut(s) 837
Hin6I GCGC 1 cut(s) 835
HinP1I GCGC 1 cut(s) 835
HincII GTYRAC 1 cut(s) 179
HindII GTYRAC 1 cut(s) 179
HinfI GANTC 4 cut(s) 363, 540, 716, 976
HpaII CCGG 1 cut(s) 702
HphI GGTGA 5 cut(s) 20, 593, 629, 995, 1043
Hpy166II GTNNAC 4 cut(s) 29, 71, 179, 820
Hpy188I TCNGA 6 cut(s) 247, 384, 655, 697, 765, 1176
Hpy188III TCNNGA 4 cut(s) 185, 367, 809, 989
Hpy8I GTNNAC 4 cut(s) 29, 71, 179, 820
HpyAV CCTTC 2 cut(s) 5, 660
HpyCH4IV ACGT 2 cut(s) 226, 952
HpyF10VI GCNNNNNNNGC 2 cut(s) 207, 438
HpyF3I CTNAG 2 cut(s) 365, 696
HpySE526I ACGT 2 cut(s) 226, 952
HspAI GCGC 1 cut(s) 835
Ksp22I TGATCA 2 cut(s) 448, 583
Kzo9I GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
LmnI GCTCC 3 cut(s) 282, 801, 1155
Lsp1109I GCAGC 2 cut(s) 855, 916
LweI GCATC 2 cut(s) 77, 119
MaeI CTAG 2 cut(s) 132, 404
MaeII ACGT 2 cut(s) 226, 952
MaeIII GTNAC 3 cut(s) 14, 493, 1073
MalI GATC 8 cut(s) 144, 249, 393, 450, 585, 605, 762, 987
MboI GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
MboII GAAGA 9 cut(s) 401, 491, 581, 587, 679, 684, 902, 905, 1129
MfeI CAATTG 1 cut(s) 77
MflI RGATCY 1 cut(s) 391
MhlI GDGCHC 4 cut(s) 236, 555, 806, 1152
MluCI AATT 8 cut(s) 77, 119, 303, 524, 562, 859, 1004, 1142
MlyI GAGTC 2 cut(s) 357, 725
MnlI CCTC 7 cut(s) 49, 261, 325, 386, 513, 565, 757
MseI TTAA 1 cut(s) 612
MslI CAYNNNNRTG 3 cut(s) 215, 217, 813
MspA1I CMGCKG 1 cut(s) 907
MspI CCGG 1 cut(s) 702
MspR9I CCNGG 4 cut(s) 703, 735, 924, 981
MunI CAATTG 1 cut(s) 77
MvaI CCWGG 3 cut(s) 735, 924, 981
MwoI GCNNNNNNNGC 2 cut(s) 207, 438
NciI CCSGG 1 cut(s) 703
NdeI CATATG 1 cut(s) 545
NdeII GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
NlaIV GGNNCC 1 cut(s) 278
NsbI TGCGCA 1 cut(s) 836
NspI RCATGY 5 cut(s) 35, 519, 841, 947, 1001
OliI CACNNNNGTG 1 cut(s) 215
PaeI GCATGC 1 cut(s) 519
PagI TCATGA 1 cut(s) 808
PceI AGGCCT 1 cut(s) 59
PciI ACATGT 1 cut(s) 943
PfeI GAWTC 2 cut(s) 540, 976
PflMI CCANNNNNTGG 1 cut(s) 1028
PkrI GCNGC 2 cut(s) 870, 906
PleI GAGTC 2 cut(s) 357, 724
PpsI GAGTC 2 cut(s) 357, 724
PscI ACATGT 1 cut(s) 943
PshBI ATTAAT 1 cut(s) 612
Psp1406I AACGTT 1 cut(s) 952
Psp6I CCWGG 3 cut(s) 733, 922, 979
PspGI CCWGG 3 cut(s) 733, 922, 979
PspN4I GGNNCC 1 cut(s) 278
PspPI GGNCC 1 cut(s) 920
PsuI RGATCY 1 cut(s) 391
PvuII CAGCTG 1 cut(s) 907
RsaI GTAC 5 cut(s) 28, 310, 402, 821, 1084
RsaNI GTAC 5 cut(s) 27, 309, 401, 820, 1083
RseI CAYNNNNRTG 3 cut(s) 215, 217, 813
SalI GTCGAC 1 cut(s) 177
SaqAI TTAA 1 cut(s) 612
SatI GCNGC 2 cut(s) 869, 905
Sau3AI GATC 8 cut(s) 142, 247, 391, 448, 583, 603, 760, 985
Sau96I GGNCC 1 cut(s) 920
SchI GAGTC 2 cut(s) 357, 725
ScrFI CCNGG 4 cut(s) 703, 735, 924, 981
SduI GDGCHC 4 cut(s) 236, 555, 806, 1152
SetI ASST 9 cut(s) 16, 159, 229, 629, 744, 776, 909, 925, 955
SfaNI GCATC 2 cut(s) 77, 119
SinI GGWCC 1 cut(s) 920
SmiMI CAYNNNNRTG 3 cut(s) 215, 217, 813
SpeI ACTAGT 1 cut(s) 131
SphI GCATGC 1 cut(s) 519
Sse9I AATT 8 cut(s) 77, 119, 303, 524, 562, 859, 1004, 1142
SseBI AGGCCT 1 cut(s) 59
SspI AATATT 2 cut(s) 610, 769
SspMI CTAG 2 cut(s) 132, 404
StuI AGGCCT 1 cut(s) 59
StyD4I CCNGG 4 cut(s) 701, 733, 922, 979
StyI CCWWGG 1 cut(s) 823
TaiI ACGT 2 cut(s) 229, 955
TaqI TCGA 3 cut(s) 138, 178, 589
TasI AATT 8 cut(s) 77, 119, 303, 524, 562, 859, 1004, 1142
TatI WGTACW 1 cut(s) 400
TfiI GAWTC 2 cut(s) 540, 976
Tru1I TTAA 1 cut(s) 612
Tru9I TTAA 1 cut(s) 612
TscAI CASTG 2 cut(s) 130, 540
TseI GCWGC 2 cut(s) 868, 904
TspDTI ATGAA 2 cut(s) 532, 582
TspGWI ACGGA 1 cut(s) 368
TspRI CASTG 2 cut(s) 130, 540
Van91I CCANNNNNTGG 1 cut(s) 1028
VpaK11BI GGWCC 1 cut(s) 920
VspI ATTAAT 1 cut(s) 612
XapI RAATTY 2 cut(s) 119, 524
XceI RCATGY 5 cut(s) 35, 519, 841, 947, 1001
XmiI GTMKAC 2 cut(s) 70, 178
XspI CTAG 2 cut(s) 132, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.