RLG00000021924

metalloendoproteinase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000309
Physical Location & Seq
Reverse (-)
79326790 .. 79330008
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021924

Sequence Viewer

Length: 1617 bp
ATGGCACCAAAATCTGATCTTTCTCTTTTCACAGTCACTCTCCTTCTCTTCCTCCTCGCCCTCTTTTCTTTCCTCTGTAATGCAACGGCAAACTCATCTCCGTTTGAGTTCCTCGAGCATCTTAAGGGTTGTCACAAAGGTGACAAGGTCAAGGGCATCAACGACCTCAAGAAGTACCTTCAAAAGTTCGGTTACTTAAACTATGAGAACCACATACATTCTGATGACGATGATTTTGACGAGCACTTAGAGGAAGCCGTCAAGACTTACCAGCTCAATTTCCACCTCAAGTCCACCGGAACATTGGACGACAAAACCCTATCAACGATGATGATGCCTCGTTGTGGTGTGCCTGATATCATCAATGGCACCACATCCATGCGATCAGCCCAGATAAAGCGCCAGCACGGTGCAATTCATACCACTGTTCACTACTCATTTTCCGTTGGAAATCTAAAATGGCCTTCTTCAAAATACCATCTGACTTACGGTTTTCTCCCCGGCACCCCCTCAGAAGTCCCGGGTGCTGTCGCACAGGCTTTCTCAACATGGGCTAAGAACACTCACTTCAAATTCAGCAAGGCTCAAAATTACCAGAGTGCAGATTTGAAGGTTAGCTTTCATAAGGGTGATCATGGAGACGGGAATTCATTTGATGGGCTTGGCGGACAGCTGGCCCATGCTGCTTACCCTACGGAGGGAGCATTGCACTACGACGCAGATGAGACTTGGTCTGTAGGTGCCAAACCAGGTGCCATGGACATTGAGAGTGTTAGCTTGCATGAAATCGGGCACCTTCTGGGACTTGGACATAGCTCAGTGGAGGAAGCTATCATGTATCCAACCATCCCCGAGGGAGCTCATAAAAGTTTGCATGAGGACGATATTCAAGGAATAAAAGCTTTATACAACGTCCCTTTTGTGGTTGATCCTCAAGTCATTTTGGTTTTTACTCTCCTCTCTTATGCAACTGCTTCTCATCCCCACAACAAAAGCTCTTCCCCATTTGAATTCCTTGAACATCTCAAGGGTTGCCACAAAGGTGATAAGGTCAAAGGCATCAATGATCTCAAAAAATACCTAGAAAAGTACGGTTACTTGAACTACAAGAACCACAGTCATTCGGACGACGATGATTTTGATGACCTTTTGGAGGAAGCCATCAAGACTTACCAGGTCAATTACCACCTCAAGTCCACCGGAACACTGGACAGCAAAACAGTGTCGAAGATGATGACACCTCGTTGTGGCGTGCCGGATATCATCAATGGCACCTCGTCCATATATGAGATCAGCCAAGAAGAGGCACCACCATGTTTTCATAAGGGTGATCATGGAGACGGGAATTCATTTGATGGCCCGGGCGGGGTCCTAGCCCATGCTTTTAGCCCGTCGGATGGAAGATTCCACTACGACGCAGATGAGCCTTGGTCTGTGGGTGCTACACCAGGTGCTTATGACTTGGAGACTGTGACTTTGGATGAAATAGGGCACTTTCTAGGACTTGGACATAGCTCAGTAGAAGGAGCTATCATGGCCCCAGCTATTCCTCCAGGAGTGACTAAAAGTTTGCATGGGGACGATGTTCAAGGAATCAAGGCTTTATACAACGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PG_binding_1 Peptidase_M10

Protein Analysis

539

Amino Acids

59.01

Weight (kDa)

5.68

Isoelectric Point (pI)

30.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PG_binding_1 PF01471 53 - 110 6.7e-11 Putative peptidoglycan binding domain
Peptidase_M10 PF00413 153 - 303 1.2e-45 Matrixin
PG_binding_1 PF01471 354 - 411 3.2e-10 Putative peptidoglycan binding domain
Peptidase_M10 PF00413 440 - 536 2.1e-30 Matrixin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000309)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07510 FvH4_6g49990 FvH4_6g50000 FvH4_6g50010
malus_domestica MD04G1045600.v1.1 MD09G1040300.v1.1 MD09G1040400.v1.1 MD09G1040500.v1.1
prunus_persica Prupe.1G198800_v2.0.a1 Prupe.3G277800_v2.0.a1 Prupe.3G278000_v2.0.a1
pyrus_communis pycom17g03670 pycom17g03680 pycom17g03720 pycom17g03730
rosa_chinensis RchiOBHm_Chr2g0170151 RchiOBHm_Chr2g0170161 RchiOBHm_Chr2g0170221 RchiOBHm_Chr2g0170241 RchiOBHm_Chr2g0170251 RchiOBHm_Chr2g0171951 RchiOBHm_Chr4g0400091 RchiOBHm_Chr7g0222561 RchiOBHm_Chr7g0222571
rosa_laevigata RLG00000009215 RLG00000021923 RLG00000021924 RLG00000021929 RLG00000021930 RLG00000021931 RLG00000021932 RLG00000021936 RLG00000021937 RLG00000021938 RLG00000021940 RLG00000021941 RLG00000029406 RLG00000029407
rosa_multiflora Rmu_co8411991.1_g000001 Rmu_co8418277.1_g000001 Rmu_co8459115.1_g000001 Rmu_sc0000037.1_g000004 Rmu_sc0001605.1_g000012 Rmu_sc0001605.1_g000013 Rmu_sc0001605.1_g000018 Rmu_sc0001605.1_g000019 Rmu_sc0012468.1_g000004 Rmu_sc0012468.1_g000011 Rmu_sc0012468.1_g000017 Rmu_sc0012468.1_g000019 Rmu_sc0012468.1_g000026 Rmu_sc0036734.1_g000001 Rmu_sc0036734.1_g000002 Rmu_sc0036735.1_g000001 Rmu_sc0036735.1_g000002
rosa_roxburghii Rroxscaffold_2G00081470 Rroxscaffold_2G00081540 Rroxscaffold_2G00081550 Rroxscaffold_3G00236660 Rroxscaffold_5G00345030 Rroxscaffold_5G00345060
rosa_rugosa Rorug02G0546300 Rorug02G0546800 Rorug02G0546800 Rorug02G0546800 Rorug02G0546900 Rorug02G0547000.1 Rorug02G0547100 Rorug02G0547300 Rorug04G0022500 Rorug07G0210800 Rorug07G0210900
rosa_samantha Rh2AG618400 Rh2AG618700 Rh2AG618800 Rh2AG619000 Rh2AG619100 Rh2AG631500 Rh2AG631600 Rh2BG630000 Rh2BG644800 Rh2BG644900 Rh2CG599400 Rh2CG599500 Rh2CG599600 Rh2CG599700 Rh2DG642000 Rh2DG642200 Rh2DG642300 Rh2DG642400 Rh2DG642500 Rh2DG642800 Rh2DG642900 Rh4AG098000 Rh4BG096300 Rh4CG107400 Rh4DG092900 Rh7AG354000 Rh7AG354100 Rh7AG354500 Rh7AG354700 Rh7BG342900 Rh7CG371500 Rh7CG371600 Rh7DG349300 Rh7DG349400
rosa_wichuraiana Rw0G015130 Rw0G018360 Rw0G018370 Rw2G051210 Rw2G051220 Rw2G051230 Rw2G051240 Rw2G051260 Rw2G051270 Rw4G008170 Rw7G029780 Rw7G030120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 8 cut(s) 4, 368, 503, 740, 752, 792, 1271, 1306
AciI CCGC 2 cut(s) 666, 1365
AclWI GGATC 1 cut(s) 923
AcsI RAATTY 4 cut(s) 572, 646, 1010, 1345
AdeI CACNNNGTG 1 cut(s) 1451
AfaI GTAC 2 cut(s) 176, 1091
AfiI CCNNNNNNNGG 9 cut(s) 344, 697, 698, 922, 1153, 1247, 1303, 1366, 1397
AflII CTTAAG 1 cut(s) 122
AgsI TTSAA 9 cut(s) 182, 471, 571, 610, 890, 1010, 1019, 1102, 1589
AjnI CCWGG 4 cut(s) 748, 1173, 1447, 1552
AleI CACNNNNGTG 2 cut(s) 138, 1041
Alw21I GWGCWC 2 cut(s) 246, 862
Alw26I GTCTC 4 cut(s) 633, 719, 1332, 1460
AlwI GGATC 1 cut(s) 923
Ama87I CYCGRG 4 cut(s) 113, 520, 851, 1360
AoxI GGCC 4 cut(s) 461, 675, 1357, 1536
ApeKI GCWGC 1 cut(s) 683
ApoI RAATTY 4 cut(s) 572, 646, 1010, 1345
ArsI GACNNNNNNTTYG 8 cut(s) 218, 250, 1121, 1153, 1459, 1491, 1552, 1584
AspLEI GCGC 1 cut(s) 402
AspS9I GGNCC 4 cut(s) 676, 1358, 1369, 1537
AsuC2I CCSGG 5 cut(s) 501, 521, 522, 1361, 1362
AsuHPI GGTGA 4 cut(s) 152, 641, 1055, 1340
AvaI CYCGRG 4 cut(s) 113, 520, 851, 1360
AvaII GGWCC 1 cut(s) 1369
BaeGI GKGCMC 2 cut(s) 795, 1494
BanI GGYRCC 8 cut(s) 4, 368, 503, 740, 752, 792, 1271, 1306
BanII GRGCYC 1 cut(s) 862
Bbv12I GWGCWC 2 cut(s) 246, 862
BbvI GCAGC 1 cut(s) 670
BccI CCATC 6 cut(s) 486, 650, 854, 1169, 1349, 1391
BceAI ACGGC 2 cut(s) 102, 242
BcgI CGANNNNNNTGC 2 cut(s) 316, 350
BciT130I CCWGG 4 cut(s) 750, 1175, 1449, 1554
BciVI GTATCC 1 cut(s) 849
BclI TGATCA 2 cut(s) 631, 1330
BcnI CCSGG 5 cut(s) 501, 521, 522, 1361, 1362
BcoDI GTCTC 4 cut(s) 633, 719, 1332, 1460
BfaI CTAG 3 cut(s) 1082, 1373, 1499
BfmI CTRYAG 1 cut(s) 735
BfoI RGCGCY 1 cut(s) 403
BfrI CTTAAG 1 cut(s) 122
BfuI GTATCC 1 cut(s) 849
BisI GCNGC 1 cut(s) 684
BlsI GCNGC 1 cut(s) 685
Bme1390I CCNGG 9 cut(s) 501, 521, 522, 750, 1175, 1361, 1362, 1449, 1554
Bme18I GGWCC 1 cut(s) 1369
BmeT110I CYCGRG 4 cut(s) 113, 520, 851, 1360
BmgT120I GGNCC 4 cut(s) 676, 1358, 1369, 1537
BmrFI CCNGG 9 cut(s) 501, 521, 522, 750, 1175, 1361, 1362, 1449, 1554
BmsI GCATC 4 cut(s) 127, 165, 324, 1068
BpmI CTGGAG 1 cut(s) 1536
BpuEI CTTGAG 5 cut(s) 152, 272, 918, 1010, 1175
BpuMI CCSGG 5 cut(s) 501, 521, 522, 1361, 1362
BsaJI CCNNGG 6 cut(s) 499, 520, 756, 852, 1360, 1427
BsaWI WCCGGW 2 cut(s) 296, 1199
Bsc4I CCNNNNNNNGG 9 cut(s) 344, 697, 698, 922, 1153, 1247, 1303, 1366, 1397
Bse1I ACTGG 1 cut(s) 1212
Bse3DI GCAATG 1 cut(s) 704
BseBI CCWGG 4 cut(s) 750, 1175, 1449, 1554
BseDI CCNNGG 6 cut(s) 499, 520, 756, 852, 1360, 1427
BseGI GGATG 5 cut(s) 374, 846, 979, 1402, 1486
BseLI CCNNNNNNNGG 9 cut(s) 344, 697, 698, 922, 1153, 1247, 1303, 1366, 1397
BseMI GCAATG 1 cut(s) 704
BseMII CTCAG 3 cut(s) 525, 831, 1530
BseNI ACTGG 1 cut(s) 1212
BseRI GAGGAG 2 cut(s) 44, 947
BseSI GKGCMC 2 cut(s) 795, 1494
BseXI GCAGC 1 cut(s) 670
BseYI CCCAGC 1 cut(s) 1540
BsgI GTGCAG 1 cut(s) 621
BshFI GGCC 4 cut(s) 463, 677, 1359, 1538
BshNI GGYRCC 8 cut(s) 4, 368, 503, 740, 752, 792, 1271, 1306
BsiHKAI GWGCWC 2 cut(s) 246, 862
BsiHKCI CYCGRG 4 cut(s) 113, 520, 851, 1360
BsiSI CCGG 6 cut(s) 297, 501, 521, 1200, 1256, 1361
BslFI GGGAC 4 cut(s) 503, 816, 899, 1592
BslI CCNNNNNNNGG 9 cut(s) 344, 697, 698, 922, 1153, 1247, 1303, 1366, 1397
BsmAI GTCTC 4 cut(s) 633, 719, 1332, 1460
BsmBI CGTCTC 2 cut(s) 633, 1332
BsmFI GGGAC 4 cut(s) 503, 816, 899, 1592
BsnI GGCC 4 cut(s) 463, 677, 1359, 1538
BsoBI CYCGRG 4 cut(s) 113, 520, 851, 1360
Bsp1286I GDGCHC 4 cut(s) 246, 795, 862, 1494
Bsp143I GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
Bsp19I CCATGG 1 cut(s) 756
BspACI CCGC 2 cut(s) 666, 1365
BspANI GGCC 4 cut(s) 463, 677, 1359, 1538
BspCNI CTCAG 3 cut(s) 524, 830, 1529
BspPI GGATC 1 cut(s) 923
BspQI GCTCTTC 1 cut(s) 1003
BspT107I GGYRCC 8 cut(s) 4, 368, 503, 740, 752, 792, 1271, 1306
BspTI CTTAAG 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 704
BsrI ACTGG 1 cut(s) 1212
BssECI CCNNGG 6 cut(s) 499, 520, 756, 852, 1360, 1427
BssMI GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
BssT1I CCWWGG 2 cut(s) 756, 1427
Bst2UI CCWGG 4 cut(s) 750, 1175, 1449, 1554
Bst4CI ACNGT 8 cut(s) 34, 410, 427, 491, 1094, 1118, 1222, 1471
Bst6I CTCTTC 3 cut(s) 53, 1003, 1296
BstAFI CTTAAG 1 cut(s) 122
BstC8I GCNNGC 4 cut(s) 404, 675, 779, 1253
BstDEI CTNAG 5 cut(s) 247, 511, 555, 817, 1516
BstDSI CCRYGG 1 cut(s) 756
BstENI CCTNNNNNAGG 1 cut(s) 1151
BstF5I GGATG 5 cut(s) 374, 846, 979, 1402, 1486
BstH2I RGCGCY 1 cut(s) 403
BstHHI GCGC 1 cut(s) 402
BstKTI GATC 7 cut(s) 19, 386, 634, 931, 1069, 1293, 1333
BstMAI GTCTC 4 cut(s) 633, 719, 1332, 1460
BstMBI GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
BstMWI GCNNNNNNNGC 2 cut(s) 683, 1535
BstNI CCWGG 4 cut(s) 750, 1175, 1449, 1554
BstSCI CCNGG 9 cut(s) 499, 519, 520, 748, 1173, 1359, 1360, 1447, 1552
BstSFI CTRYAG 1 cut(s) 735
BstSLI GKGCMC 2 cut(s) 795, 1494
BstV1I GCAGC 1 cut(s) 670
BsuI GTATCC 1 cut(s) 849
BsuRI GGCC 4 cut(s) 463, 677, 1359, 1538
BtgI CCRYGG 1 cut(s) 756
BtsCI GGATG 5 cut(s) 374, 846, 979, 1402, 1486
BtsIMutI CAGTG 4 cut(s) 423, 825, 1205, 1227
Cac8I GCNNGC 4 cut(s) 404, 675, 779, 1253
CfoI GCGC 1 cut(s) 402
Cfr13I GGNCC 4 cut(s) 676, 1358, 1369, 1537
Cfr9I CCCGGG 2 cut(s) 520, 1360
CseI GACGC 2 cut(s) 725, 1424
CsiI ACCWGGT 3 cut(s) 748, 1173, 1447
Csp6I GTAC 2 cut(s) 175, 1090
CviQI GTAC 2 cut(s) 175, 1090
DdeI CTNAG 5 cut(s) 247, 511, 555, 817, 1516
DpnI GATC 7 cut(s) 18, 385, 633, 930, 1068, 1292, 1332
DpnII GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
DraIII CACNNNGTG 1 cut(s) 1451
Eam1104I CTCTTC 3 cut(s) 53, 1003, 1296
EarI CTCTTC 3 cut(s) 53, 1003, 1296
EciI GGCGGA 1 cut(s) 681
Ecl136II GAGCTC 1 cut(s) 860
Eco130I CCWWGG 2 cut(s) 756, 1427
Eco24I GRGCYC 1 cut(s) 862
Eco32I GATATC 2 cut(s) 358, 1261
Eco47I GGWCC 1 cut(s) 1369
Eco53kI GAGCTC 1 cut(s) 860
Eco88I CYCGRG 4 cut(s) 113, 520, 851, 1360
EcoICRI GAGCTC 1 cut(s) 860
EcoNI CCTNNNNNAGG 1 cut(s) 1151
EcoO109I RGGNCCY 1 cut(s) 1369
EcoRI GAATTC 3 cut(s) 646, 1010, 1345
EcoRII CCWGG 4 cut(s) 748, 1173, 1447, 1552
EcoRV GATATC 2 cut(s) 358, 1261
EcoT14I CCWWGG 2 cut(s) 756, 1427
EcoT38I GRGCYC 1 cut(s) 862
ErhI CCWWGG 2 cut(s) 756, 1427
Esp3I CGTCTC 2 cut(s) 633, 1332
FalI AAGNNNNNCTT 2 cut(s) 602, 634
FaqI GGGAC 4 cut(s) 503, 816, 899, 1592
FauI CCCGC 1 cut(s) 1358
FbaI TGATCA 2 cut(s) 631, 1330
Fnu4HI GCNGC 1 cut(s) 684
FokI GGATG 5 cut(s) 361, 833, 966, 1409, 1493
FriOI GRGCYC 1 cut(s) 862
Fsp4HI GCNGC 1 cut(s) 684
FspBI CTAG 3 cut(s) 1082, 1373, 1499
GlaI GCGC 1 cut(s) 401
GluI GCNGC 1 cut(s) 684
GsaI CCCAGC 1 cut(s) 1544
GsuI CTGGAG 1 cut(s) 1536
HaeII RGCGCY 1 cut(s) 403
HaeIII GGCC 4 cut(s) 463, 677, 1359, 1538
HapII CCGG 6 cut(s) 297, 501, 521, 1200, 1256, 1361
HgaI GACGC 2 cut(s) 725, 1424
HhaI GCGC 1 cut(s) 402
Hin6I GCGC 1 cut(s) 400
HinP1I GCGC 1 cut(s) 400
HindIII AAGCTT 1 cut(s) 900
HinfI GANTC 2 cut(s) 1404, 1593
HpaII CCGG 6 cut(s) 297, 501, 521, 1200, 1256, 1361
HphI GGTGA 4 cut(s) 152, 641, 1055, 1340
Hpy166II GTNNAC 3 cut(s) 294, 430, 1197
Hpy188I TCNGA 7 cut(s) 16, 223, 483, 514, 1126, 1396, 1616
Hpy188III TCNNGA 3 cut(s) 169, 262, 1165
Hpy8I GTNNAC 3 cut(s) 294, 430, 1197
Hpy99I CGWCG 4 cut(s) 719, 1133, 1396, 1418
HpyAV CCTTC 6 cut(s) 53, 188, 474, 604, 806, 1517
HpyCH4III ACNGT 8 cut(s) 34, 410, 427, 491, 1094, 1118, 1222, 1471
HpyCH4IV ACGT 2 cut(s) 912, 1611
HpyCH4V TGCA 8 cut(s) 83, 413, 602, 709, 781, 874, 968, 1573
HpyF10VI GCNNNNNNNGC 2 cut(s) 683, 1535
HpyF3I CTNAG 5 cut(s) 247, 511, 555, 817, 1516
HpySE526I ACGT 2 cut(s) 912, 1611
HspAI GCGC 1 cut(s) 400
Ksp22I TGATCA 2 cut(s) 631, 1330
Kzo9I GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
LguI GCTCTTC 1 cut(s) 1003
LmnI GCTCC 3 cut(s) 701, 857, 1526
Lsp1109I GCAGC 1 cut(s) 670
LweI GCATC 4 cut(s) 127, 165, 324, 1068
MabI ACCWGGT 3 cut(s) 748, 1173, 1447
MaeI CTAG 3 cut(s) 1082, 1373, 1499
MaeII ACGT 2 cut(s) 912, 1611
MaeIII GTNAC 7 cut(s) 34, 131, 140, 191, 1094, 1471, 1558
MalI GATC 7 cut(s) 18, 385, 633, 930, 1068, 1292, 1332
MboI GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
MboII GAAGA 6 cut(s) 40, 459, 990, 1240, 1313, 1413
MhlI GDGCHC 4 cut(s) 246, 795, 862, 1494
MluCI AATT 8 cut(s) 277, 414, 572, 589, 646, 1010, 1180, 1345
MmeI TCCRAC 3 cut(s) 427, 866, 1374
MseI TTAA 2 cut(s) 123, 197
MslI CAYNNNNRTG 7 cut(s) 138, 222, 377, 627, 1041, 1312, 1326
MspA1I CMGCKG 1 cut(s) 673
MspCI CTTAAG 1 cut(s) 122
MspI CCGG 6 cut(s) 297, 501, 521, 1200, 1256, 1361
MspR9I CCNGG 9 cut(s) 501, 521, 522, 750, 1175, 1361, 1362, 1449, 1554
MvaI CCWGG 4 cut(s) 750, 1175, 1449, 1554
MwoI GCNNNNNNNGC 2 cut(s) 683, 1535
NciI CCSGG 5 cut(s) 501, 521, 522, 1361, 1362
NcoI CCATGG 1 cut(s) 756
NdeII GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
NmuCI GTSAC 5 cut(s) 34, 131, 140, 1471, 1558
OliI CACNNNNGTG 2 cut(s) 138, 1041
PaeR7I CTCGAG 1 cut(s) 113
PciSI GCTCTTC 1 cut(s) 1003
PfeI GAWTC 2 cut(s) 1404, 1593
PflFI GACNNNGTC 2 cut(s) 146, 730
PfoI TCCNGGA 1 cut(s) 1552
PkrI GCNGC 1 cut(s) 685
PpuMI RGGWCCY 1 cut(s) 1369
Psp124BI GAGCTC 1 cut(s) 862
Psp5II RGGWCCY 1 cut(s) 1369
Psp6I CCWGG 4 cut(s) 748, 1173, 1447, 1552
PspFI CCCAGC 1 cut(s) 1540
PspGI CCWGG 4 cut(s) 748, 1173, 1447, 1552
PspPI GGNCC 4 cut(s) 676, 1358, 1369, 1537
PspPPI RGGWCCY 1 cut(s) 1369
PspXI VCTCGAGB 1 cut(s) 113
PsyI GACNNNGTC 2 cut(s) 146, 730
PvuII CAGCTG 1 cut(s) 673
RsaI GTAC 2 cut(s) 176, 1091
RsaNI GTAC 2 cut(s) 175, 1090
RseI CAYNNNNRTG 7 cut(s) 138, 222, 377, 627, 1041, 1312, 1326
SacI GAGCTC 1 cut(s) 862
SapI GCTCTTC 1 cut(s) 1003
SaqAI TTAA 2 cut(s) 123, 197
SatI GCNGC 1 cut(s) 684
Sau3AI GATC 7 cut(s) 16, 383, 631, 928, 1066, 1290, 1330
Sau96I GGNCC 4 cut(s) 676, 1358, 1369, 1537
ScrFI CCNGG 9 cut(s) 501, 521, 522, 750, 1175, 1361, 1362, 1449, 1554
SduI GDGCHC 4 cut(s) 246, 795, 862, 1494
SexAI ACCWGGT 3 cut(s) 748, 1173, 1447
SfaNI GCATC 4 cut(s) 127, 165, 324, 1068
SfcI CTRYAG 1 cut(s) 735
Sfr274I CTCGAG 1 cut(s) 113
SinI GGWCC 1 cut(s) 1369
SlaI CTCGAG 1 cut(s) 113
SmaI CCCGGG 2 cut(s) 522, 1362
SmiMI CAYNNNNRTG 7 cut(s) 138, 222, 377, 627, 1041, 1312, 1326
SmlI CTYRAG 7 cut(s) 113, 122, 167, 287, 933, 1025, 1190
SmoI CTYRAG 7 cut(s) 113, 122, 167, 287, 933, 1025, 1190
SrfI GCCCGGGC 1 cut(s) 1362
Sse9I AATT 8 cut(s) 277, 414, 572, 589, 646, 1010, 1180, 1345
SsiI CCGC 2 cut(s) 666, 1365
SspMI CTAG 3 cut(s) 1082, 1373, 1499
SstI GAGCTC 1 cut(s) 862
StyD4I CCNGG 9 cut(s) 499, 519, 520, 748, 1173, 1359, 1360, 1447, 1552
StyI CCWWGG 2 cut(s) 756, 1427
TaaI ACNGT 8 cut(s) 34, 410, 427, 491, 1094, 1118, 1222, 1471
TaiI ACGT 2 cut(s) 915, 1614
TaqI TCGA 2 cut(s) 114, 1226
TasI AATT 8 cut(s) 277, 414, 572, 589, 646, 1010, 1180, 1345
TfiI GAWTC 2 cut(s) 1404, 1593
Tru1I TTAA 2 cut(s) 123, 197
Tru9I TTAA 2 cut(s) 123, 197
TscAI CASTG 4 cut(s) 430, 825, 1212, 1227
TseFI GTSAC 5 cut(s) 34, 131, 140, 1471, 1558
TseI GCWGC 1 cut(s) 683
Tsp45I GTSAC 5 cut(s) 34, 131, 140, 1471, 1558
TspDTI ATGAA 7 cut(s) 407, 611, 639, 798, 1310, 1338, 1497
TspGWI ACGGA 3 cut(s) 90, 433, 710
TspMI CCCGGG 2 cut(s) 520, 1360
TspRI CASTG 4 cut(s) 430, 825, 1212, 1227
Tth111I GACNNNGTC 2 cut(s) 146, 730
Vha464I CTTAAG 1 cut(s) 122
VpaK11BI GGWCC 1 cut(s) 1369
XagI CCTNNNNNAGG 1 cut(s) 1151
XapI RAATTY 4 cut(s) 572, 646, 1010, 1345
XcmI CCANNNNNNNNNTGG 2 cut(s) 301, 1204
XhoI CTCGAG 1 cut(s) 113
XmaI CCCGGG 2 cut(s) 520, 1360
XspI CTAG 3 cut(s) 1082, 1373, 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.