Rorug02G0546900

metalloendoproteinase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000309
Physical Location & Seq
Forward (+)
67532858 .. 67535885
3028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0546900.1

Sequence Viewer

Length: 1596 bp
ATGAGGCGGAGAGCGGCGGACTTCCGGCGGCCATTGAGGGCCAGAAGGTTTCCCAATGCGTTTTGGTGGGTTCTGTGTGGGGTTGCAGTGTTGCTGTTTATCTATACTTTGAGCAGAGGCACTCAGATTGAATCCAGACCTGTAATAGCCACAAGATATAGGCATGATAGAGTTATGGAAGGCCTGAACATTACTGAAGAAATGTTGAGCCCCAACTCAGTCACCAGGCAGATCAGTGACCAAATAGCTCTGGCAAAAGCTTTTGTTGTGATTGCCAAAGAGAGCAACAACCTTCAGTTTGCTTGGGAGTTAAGTGCCCAGATCCGCAACTCACAGATTCTGCTGTCAAATGCTGCGACAAGGAGACCTTTGACAGCCAGAGAATCAGAAACTGCAATCCGTGATATGGCACTTGTACTGTACCAAGCACAGCTGCTCCATTACGATAGTGCAACCATGATTATGAGACATAAAGCCAAAATACAATCTCTGGAAGAACAGATGAGTTCTGTGAGTGAGAAAAGTTCCAAGTATGGACAGATAGCAGCTGAGGAAGTCCCGAAAAGTCTTTACTGCCTTGGTATTCAGCTGACTAGTGAATGGTTCAGACACCCAAATCTACAGAGGAAACTCAAGGACAGAAAAATAGACATGAAAGTAAAGGATAACAATCTCTATCATTTCTGTGTATTCTCTGACAACATCCTGGCAACTTCAGTTGTGGTCAATTCAACAGCATTAAGTTCCAACAATCCAGATAAGGTCGTCTTCCATCTTGTAACCGATGAAATCAACTATGCTGCAATGAAGGCCTGGTTTTCTATGAACAGCTTCAGAGGAGTGACTGTCGAGGTTCAAAAGTTTGAGGACTTCAAATGGCTGAATGCTTCTTATGTTCCTGTGCTTAAGCAGCTCCAAGACTCTGAAACTCAAAGTTACTATTTTTCTGGAAACAGTGATGATGGCCGGACACCAATCAAGTTTCGGAACCCAAAGTATCTTTCTATGCTTAACCATCTGCGGTTTTATATTCCAGAAGTCTTTCCTGCCCTGAAGAAGGTGGTATTCCTTGATGATGATGTTGTTGTCCAGAAGGATCTGTCTGGTCTGTTCTCAATTGATTTGAATGGTAATGTAAATGGAGCAGTCGAGACATGCATGGAGACGTTTCACAGATACCATAAATATCTGAACTACTCTCACCCTCTCATACGATCACATTTTGATCCCGATGCCTGTGGATGGGCATTTGGAATGAATGTGTTTGATTTGGTTCAGTGGAGGAATAGGAATGTTACTGGCATCTACCATTACTGGCAGGAAAGAAATGTTGATCGGACACTGTGGAAACTTGGCACATTGCCACCTGGATTGTTGACATTCTATGGACTGACTGAGCCTTTGGAGCCCTCATGGCATGTTTTGGGTTTAGGGTACACAACTGTTGATCCTCATTTGATAGAGAAGGGTGCTGTGCTGCACTACAATGGAAACTCAAAACCGTGGTTGAAGATTGGGATGGAAAAGTACAAGCCCCTTTGGGAGAAATTTATTGATTATACTCATCCTTTGTTGCAACGATGCAATTTCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PG_binding_1 Peptidase_M10

Protein Analysis

531

Amino Acids

61.62

Weight (kDa)

9.14

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GAUT_1 PF25557 72 - 145 2.4e-09 Galacturonosyltransferase domain 1
Glyco_transf_8 PF01501 233 - 505 3.1e-69 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000309)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07510 FvH4_6g49990 FvH4_6g50000 FvH4_6g50010
malus_domestica MD04G1045600.v1.1 MD09G1040300.v1.1 MD09G1040400.v1.1 MD09G1040500.v1.1
prunus_persica Prupe.1G198800_v2.0.a1 Prupe.3G277800_v2.0.a1 Prupe.3G278000_v2.0.a1
pyrus_communis pycom17g03670 pycom17g03680 pycom17g03720 pycom17g03730
rosa_chinensis RchiOBHm_Chr2g0170151 RchiOBHm_Chr2g0170161 RchiOBHm_Chr2g0170221 RchiOBHm_Chr2g0170241 RchiOBHm_Chr2g0170251 RchiOBHm_Chr2g0171951 RchiOBHm_Chr4g0400091 RchiOBHm_Chr7g0222561 RchiOBHm_Chr7g0222571
rosa_laevigata RLG00000009215 RLG00000021923 RLG00000021924 RLG00000021929 RLG00000021930 RLG00000021931 RLG00000021932 RLG00000021936 RLG00000021937 RLG00000021938 RLG00000021940 RLG00000021941 RLG00000029406 RLG00000029407
rosa_multiflora Rmu_co8411991.1_g000001 Rmu_co8418277.1_g000001 Rmu_co8459115.1_g000001 Rmu_sc0000037.1_g000004 Rmu_sc0001605.1_g000012 Rmu_sc0001605.1_g000013 Rmu_sc0001605.1_g000018 Rmu_sc0001605.1_g000019 Rmu_sc0012468.1_g000004 Rmu_sc0012468.1_g000011 Rmu_sc0012468.1_g000017 Rmu_sc0012468.1_g000019 Rmu_sc0012468.1_g000026 Rmu_sc0036734.1_g000001 Rmu_sc0036734.1_g000002 Rmu_sc0036735.1_g000001 Rmu_sc0036735.1_g000002
rosa_roxburghii Rroxscaffold_2G00081470 Rroxscaffold_2G00081540 Rroxscaffold_2G00081550 Rroxscaffold_3G00236660 Rroxscaffold_5G00345030 Rroxscaffold_5G00345060
rosa_rugosa Rorug02G0546300 Rorug02G0546800 Rorug02G0546800 Rorug02G0546800 Rorug02G0546900 Rorug02G0547000.1 Rorug02G0547100 Rorug02G0547300 Rorug04G0022500 Rorug07G0210800 Rorug07G0210900
rosa_samantha Rh2AG618400 Rh2AG618700 Rh2AG618800 Rh2AG619000 Rh2AG619100 Rh2AG631500 Rh2AG631600 Rh2BG630000 Rh2BG644800 Rh2BG644900 Rh2CG599400 Rh2CG599500 Rh2CG599600 Rh2CG599700 Rh2DG642000 Rh2DG642200 Rh2DG642300 Rh2DG642400 Rh2DG642500 Rh2DG642800 Rh2DG642900 Rh4AG098000 Rh4BG096300 Rh4CG107400 Rh4DG092900 Rh7AG354000 Rh7AG354100 Rh7AG354500 Rh7AG354700 Rh7BG342900 Rh7CG371500 Rh7CG371600 Rh7DG349300 Rh7DG349400
rosa_wichuraiana Rw0G015130 Rw0G018360 Rw0G018370 Rw2G051210 Rw2G051220 Rw2G051230 Rw2G051240 Rw2G051260 Rw2G051270 Rw4G008170 Rw7G029780 Rw7G030120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 14
AciI CCGC 6 cut(s) 7, 14, 17, 28, 325, 1021
AclWI GGATC 4 cut(s) 316, 1104, 1220, 1442
AcoI YGGCCR 2 cut(s) 29, 964
AcsI RAATTY 1 cut(s) 1547
AcuI CTGAAG 5 cut(s) 216, 278, 699, 817, 1073
AfaI GTAC 4 cut(s) 417, 422, 1436, 1529
AfiI CCNNNNNNNGG 3 cut(s) 406, 1057, 1242
AflII CTTAAG 1 cut(s) 905
AgsI TTSAA 6 cut(s) 131, 732, 857, 874, 1126, 1510
AhlI ACTAGT 1 cut(s) 593
AjnI CCWGG 4 cut(s) 224, 705, 812, 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 985, 1017
AluBI AGCT 7 cut(s) 248, 260, 433, 548, 589, 831, 913
AluI AGCT 7 cut(s) 248, 260, 433, 548, 589, 831, 913
Alw26I GTCTC 4 cut(s) 358, 460, 1145, 1157
AlwI GGATC 4 cut(s) 316, 1104, 1220, 1442
AlwNI CAGNNNCTG 2 cut(s) 340, 392
AoxI GGCC 5 cut(s) 29, 39, 181, 810, 964
ApeKI GCWGC 6 cut(s) 353, 433, 545, 800, 910, 1477
ApoI RAATTY 1 cut(s) 1547
ArsI GACNNNNNNTTYG 2 cut(s) 1384, 1416
Asp700I GAANNNNTTC 2 cut(s) 830, 1041
AspS9I GGNCC 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 214, 1193
BaeGI GKGCMC 1 cut(s) 319
BanII GRGCYC 2 cut(s) 212, 1410
BbsI GAAGAC 1 cut(s) 760
BbvCI CCTCAGC 1 cut(s) 549
BbvI GCAGC 6 cut(s) 340, 420, 557, 787, 922, 1464
BccI CCATC 5 cut(s) 780, 956, 1023, 1236, 1513
BciT130I CCWGG 4 cut(s) 226, 707, 814, 1368
BcoDI GTCTC 4 cut(s) 358, 460, 1145, 1157
BcuI ACTAGT 1 cut(s) 593
BfaI CTAG 1 cut(s) 594
BfmI CTRYAG 1 cut(s) 620
BfrI CTTAAG 1 cut(s) 905
BglI GCCNNNNNGGC 1 cut(s) 1414
BisI GCNGC 8 cut(s) 15, 29, 354, 434, 546, 801, 911, 1478
BlsI GCNGC 8 cut(s) 16, 30, 355, 435, 547, 802, 912, 1479
Bme1390I CCNGG 4 cut(s) 226, 707, 814, 1368
BmgT120I GGNCC 1 cut(s) 39
BmiI GGNNCC 2 cut(s) 989, 1407
BmrFI CCNGG 4 cut(s) 226, 707, 814, 1368
BmsI GCATC 3 cut(s) 1222, 1311, 1571
BpiI GAAGAC 1 cut(s) 760
Bpu10I CCTNAGC 1 cut(s) 549
BpuEI CTTGAG 1 cut(s) 617
BsaBI GATNNNNATC 1 cut(s) 669
BsaI GGTCTC 1 cut(s) 358
BsaJI CCNNGG 2 cut(s) 577, 1502
BsaXI ACNNNNNCTCC 4 cut(s) 420, 450, 831, 861
Bsc4I CCNNNNNNNGG 3 cut(s) 406, 1057, 1242
Bse1I ACTGG 2 cut(s) 1303, 1319
Bse3DI GCAATG 2 cut(s) 810, 1358
Bse8I GATNNNNATC 1 cut(s) 669
BseBI CCWGG 4 cut(s) 226, 707, 814, 1368
BseDI CCNNGG 2 cut(s) 577, 1502
BseGI GGATG 4 cut(s) 702, 1247, 1524, 1564
BseJI GATNNNNATC 1 cut(s) 669
BseLI CCNNNNNNNGG 3 cut(s) 406, 1057, 1242
BseMI GCAATG 2 cut(s) 810, 1358
BseMII CTCAG 4 cut(s) 137, 231, 540, 1386
BseNI ACTGG 2 cut(s) 1303, 1319
BseRI GAGGAG 1 cut(s) 852
BseSI GKGCMC 1 cut(s) 319
BseXI GCAGC 6 cut(s) 340, 420, 557, 787, 922, 1464
BsgI GTGCAG 1 cut(s) 1463
BshFI GGCC 5 cut(s) 31, 41, 183, 812, 966
BsiSI CCGG 2 cut(s) 25, 967
BslFI GGGAC 1 cut(s) 542
BslI CCNNNNNNNGG 3 cut(s) 406, 1057, 1242
BsmAI GTCTC 4 cut(s) 358, 460, 1145, 1157
BsmBI CGTCTC 1 cut(s) 1157
BsmFI GGGAC 1 cut(s) 542
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 5 cut(s) 31, 41, 183, 812, 966
Bso31I GGTCTC 1 cut(s) 358
Bsp1286I GDGCHC 3 cut(s) 212, 319, 1410
Bsp143I GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
BspACI CCGC 6 cut(s) 7, 14, 17, 28, 325, 1021
BspANI GGCC 5 cut(s) 31, 41, 183, 812, 966
BspCNI CTCAG 4 cut(s) 136, 230, 541, 1387
BspLI GGNNCC 2 cut(s) 989, 1407
BspPI GGATC 4 cut(s) 316, 1104, 1220, 1442
BspTI CTTAAG 1 cut(s) 905
BspTNI GGTCTC 1 cut(s) 358
BsrBI CCGCTC 1 cut(s) 14
BsrDI GCAATG 2 cut(s) 810, 1358
BsrI ACTGG 2 cut(s) 1303, 1319
BssECI CCNNGG 2 cut(s) 577, 1502
BssMI GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
BssT1I CCWWGG 1 cut(s) 577
Bst2UI CCWGG 4 cut(s) 226, 707, 814, 1368
Bst4CI ACNGT 6 cut(s) 420, 847, 956, 1344, 1444, 1503
BstAFI CTTAAG 1 cut(s) 905
BstDEI CTNAG 4 cut(s) 123, 217, 549, 1395
BstDSI CCRYGG 1 cut(s) 1502
BstENI CCTNNNNNAGG 1 cut(s) 1055
BstF5I GGATG 4 cut(s) 702, 1247, 1524, 1564
BstKTI GATC 7 cut(s) 234, 324, 1099, 1217, 1228, 1336, 1450
BstMAI GTCTC 4 cut(s) 358, 460, 1145, 1157
BstMBI GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
BstMWI GCNNNNNNNGC 4 cut(s) 809, 910, 1405, 1414
BstNI CCWGG 4 cut(s) 226, 707, 814, 1368
BstNSI RCATGY 2 cut(s) 1158, 1421
BstSCI CCNGG 4 cut(s) 224, 705, 812, 1366
BstSFI CTRYAG 1 cut(s) 620
BstSLI GKGCMC 1 cut(s) 319
BstV1I GCAGC 6 cut(s) 340, 420, 557, 787, 922, 1464
BstV2I GAAGAC 1 cut(s) 760
BstX2I RGATCY 2 cut(s) 321, 1096
BstYI RGATCY 2 cut(s) 321, 1096
BsuRI GGCC 5 cut(s) 31, 41, 183, 812, 966
BtgI CCRYGG 1 cut(s) 1502
BtsCI GGATG 4 cut(s) 702, 1247, 1524, 1564
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 5 cut(s) 93, 241, 961, 1283, 1340
CaiI CAGNNNCTG 2 cut(s) 340, 392
Cfr13I GGNCC 1 cut(s) 39
Csp6I GTAC 4 cut(s) 416, 421, 1435, 1528
CspCI CAANNNNNGTGG 2 cut(s) 1353, 1388
CviAII CATG 7 cut(s) 164, 457, 652, 1155, 1159, 1413, 1418
CviQI GTAC 4 cut(s) 416, 421, 1435, 1528
DdeI CTNAG 4 cut(s) 123, 217, 549, 1395
DpnI GATC 7 cut(s) 233, 323, 1098, 1216, 1227, 1335, 1449
DpnII GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
EaeI YGGCCR 2 cut(s) 29, 964
EciI GGCGGA 2 cut(s) 22, 32
Eco130I CCWWGG 1 cut(s) 577
Eco147I AGGCCT 2 cut(s) 183, 812
Eco24I GRGCYC 2 cut(s) 212, 1410
Eco31I GGTCTC 1 cut(s) 358
Eco57I CTGAAG 5 cut(s) 216, 278, 699, 817, 1073
EcoNI CCTNNNNNAGG 1 cut(s) 1055
EcoRII CCWGG 4 cut(s) 224, 705, 812, 1366
EcoT14I CCWWGG 1 cut(s) 577
EcoT22I ATGCAT 1 cut(s) 1160
EcoT38I GRGCYC 2 cut(s) 212, 1410
ErhI CCWWGG 1 cut(s) 577
Esp3I CGTCTC 1 cut(s) 1157
FaeI CATG 7 cut(s) 167, 460, 655, 1158, 1162, 1416, 1421
FalI AAGNNNNNCTT 4 cut(s) 352, 384, 752, 784
FaqI GGGAC 1 cut(s) 542
FatI CATG 7 cut(s) 163, 456, 651, 1154, 1158, 1412, 1417
Fnu4HI GCNGC 8 cut(s) 15, 29, 354, 434, 546, 801, 911, 1478
FokI GGATG 4 cut(s) 689, 1254, 1531, 1551
FriOI GRGCYC 2 cut(s) 212, 1410
Fsp4HI GCNGC 8 cut(s) 15, 29, 354, 434, 546, 801, 911, 1478
FspBI CTAG 1 cut(s) 594
GluI GCNGC 8 cut(s) 15, 29, 354, 434, 546, 801, 911, 1478
HaeIII GGCC 5 cut(s) 31, 41, 183, 812, 966
HapII CCGG 2 cut(s) 25, 967
Hin1II CATG 7 cut(s) 167, 460, 655, 1158, 1162, 1416, 1421
HincII GTYRAC 1 cut(s) 1377
HindII GTYRAC 1 cut(s) 1377
HindIII AAGCTT 1 cut(s) 258
HinfI GANTC 4 cut(s) 131, 337, 383, 920
HpaII CCGG 2 cut(s) 25, 967
HphI GGTGA 2 cut(s) 214, 1193
Hpy166II GTNNAC 2 cut(s) 1377, 1437
Hpy188I TCNGA 9 cut(s) 126, 388, 608, 697, 836, 925, 987, 1191, 1338
Hpy188III TCNNGA 9 cut(s) 135, 491, 559, 755, 948, 1034, 1090, 1150, 1229
Hpy8I GTNNAC 2 cut(s) 1377, 1437
HpyAV CCTTC 7 cut(s) 39, 173, 302, 802, 1051, 1087, 1459
HpyCH4III ACNGT 6 cut(s) 420, 847, 956, 1344, 1444, 1503
HpyCH4IV ACGT 1 cut(s) 1166
HpyCH4V TGCA 8 cut(s) 86, 395, 452, 803, 1158, 1480, 1576, 1584
HpyF10VI GCNNNNNNNGC 4 cut(s) 809, 910, 1405, 1414
HpyF3I CTNAG 4 cut(s) 123, 217, 549, 1395
HpySE526I ACGT 1 cut(s) 1166
Hsp92II CATG 7 cut(s) 167, 460, 655, 1158, 1162, 1416, 1421
Kzo9I GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
LmnI GCTCC 4 cut(s) 441, 918, 1142, 1405
Lsp1109I GCAGC 6 cut(s) 340, 420, 557, 787, 922, 1464
LweI GCATC 3 cut(s) 1222, 1311, 1571
MaeI CTAG 1 cut(s) 594
MaeII ACGT 1 cut(s) 1166
MaeIII GTNAC 6 cut(s) 220, 236, 778, 841, 935, 1294
MalI GATC 7 cut(s) 233, 323, 1098, 1216, 1227, 1335, 1449
MbiI CCGCTC 1 cut(s) 14
MboI GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
MboII GAAGA 5 cut(s) 209, 506, 760, 1066, 1522
MfeI CAATTG 1 cut(s) 1116
MflI RGATCY 2 cut(s) 321, 1096
MhlI GDGCHC 3 cut(s) 212, 319, 1410
MluCI AATT 4 cut(s) 727, 1116, 1547, 1585
MlyI GAGTC 1 cut(s) 914
MmeI TCCRAC 1 cut(s) 771
Mph1103I ATGCAT 1 cut(s) 1160
MroXI GAANNNNTTC 2 cut(s) 830, 1041
MseI TTAA 4 cut(s) 311, 740, 906, 1011
MslI CAYNNNNRTG 3 cut(s) 461, 684, 1485
MspA1I CMGCKG 3 cut(s) 433, 548, 589
MspCI CTTAAG 1 cut(s) 905
MspI CCGG 2 cut(s) 25, 967
MspR9I CCNGG 4 cut(s) 226, 707, 814, 1368
MunI CAATTG 1 cut(s) 1116
Mva1269I GAATGC 1 cut(s) 889
MvaI CCWGG 4 cut(s) 226, 707, 814, 1368
MwoI GCNNNNNNNGC 4 cut(s) 809, 910, 1405, 1414
NdeII GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
NlaIII CATG 7 cut(s) 167, 460, 655, 1158, 1162, 1416, 1421
NlaIV GGNNCC 2 cut(s) 989, 1407
NmuCI GTSAC 3 cut(s) 220, 236, 841
NsiI ATGCAT 1 cut(s) 1160
NspI RCATGY 2 cut(s) 1158, 1421
PceI AGGCCT 2 cut(s) 183, 812
PctI GAATGC 1 cut(s) 889
PdmI GAANNNNTTC 2 cut(s) 830, 1041
PfeI GAWTC 3 cut(s) 131, 337, 383
PkrI GCNGC 8 cut(s) 16, 30, 355, 435, 547, 802, 912, 1479
PleI GAGTC 1 cut(s) 914
PpsI GAGTC 1 cut(s) 914
Psp6I CCWGG 4 cut(s) 224, 705, 812, 1366
PspGI CCWGG 4 cut(s) 224, 705, 812, 1366
PspN4I GGNNCC 2 cut(s) 989, 1407
PspPI GGNCC 1 cut(s) 39
PstNI CAGNNNCTG 2 cut(s) 340, 392
PsuI RGATCY 2 cut(s) 321, 1096
PvuII CAGCTG 3 cut(s) 433, 548, 589
RsaI GTAC 4 cut(s) 417, 422, 1436, 1529
RsaNI GTAC 4 cut(s) 416, 421, 1435, 1528
RseI CAYNNNNRTG 3 cut(s) 461, 684, 1485
SaqAI TTAA 4 cut(s) 311, 740, 906, 1011
SatI GCNGC 8 cut(s) 15, 29, 354, 434, 546, 801, 911, 1478
Sau3AI GATC 7 cut(s) 231, 321, 1096, 1214, 1225, 1333, 1447
Sau96I GGNCC 1 cut(s) 39
SchI GAGTC 1 cut(s) 914
ScrFI CCNGG 4 cut(s) 226, 707, 814, 1368
SduI GDGCHC 3 cut(s) 212, 319, 1410
SfaNI GCATC 3 cut(s) 1222, 1311, 1571
SfcI CTRYAG 1 cut(s) 620
SmiMI CAYNNNNRTG 3 cut(s) 461, 684, 1485
SmlI CTYRAG 2 cut(s) 632, 905
SmoI CTYRAG 2 cut(s) 632, 905
SpeI ACTAGT 1 cut(s) 593
Sse9I AATT 4 cut(s) 727, 1116, 1547, 1585
SseBI AGGCCT 2 cut(s) 183, 812
SsiI CCGC 6 cut(s) 7, 14, 17, 28, 325, 1021
SspMI CTAG 1 cut(s) 594
StuI AGGCCT 2 cut(s) 183, 812
StyD4I CCNGG 4 cut(s) 224, 705, 812, 1366
StyI CCWWGG 1 cut(s) 577
TaaI ACNGT 6 cut(s) 420, 847, 956, 1344, 1444, 1503
TaiI ACGT 1 cut(s) 1169
TaqI TCGA 2 cut(s) 849, 1149
TasI AATT 4 cut(s) 727, 1116, 1547, 1585
TatI WGTACW 2 cut(s) 415, 1527
TauI GCSGC 2 cut(s) 17, 31
TfiI GAWTC 3 cut(s) 131, 337, 383
Tru1I TTAA 4 cut(s) 311, 740, 906, 1011
Tru9I TTAA 4 cut(s) 311, 740, 906, 1011
TscAI CASTG 5 cut(s) 93, 241, 961, 1283, 1347
TseFI GTSAC 3 cut(s) 220, 236, 841
TseI GCWGC 6 cut(s) 353, 433, 545, 800, 910, 1477
Tsp45I GTSAC 3 cut(s) 220, 236, 841
TspDTI ATGAA 5 cut(s) 668, 801, 821, 839, 1271
TspGWI ACGGA 1 cut(s) 389
TspRI CASTG 5 cut(s) 93, 241, 961, 1283, 1347
Vha464I CTTAAG 1 cut(s) 905
XagI CCTNNNNNAGG 1 cut(s) 1055
XapI RAATTY 1 cut(s) 1547
XceI RCATGY 2 cut(s) 1158, 1421
XmnI GAANNNNTTC 2 cut(s) 830, 1041
XspI CTAG 1 cut(s) 594
Zsp2I ATGCAT 1 cut(s) 1160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.