Rorug07G0210900

metalloendoproteinase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000309
Physical Location & Seq
Reverse (-)
18618521 .. 18620079
1559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0210900.1

Sequence Viewer

Length: 1530 bp
ATGTCTTCAAGTGAAGACAACATCAACAAAAGAAACTCTCCCGCCGCCGTAGAGGTTCAAAATCTCCGTCACGTTCAAGTTCTAGCTCAAGTTCTGGCTCAAGTTCTAGGTCATACTCAAGAGATAGAGATAGCAACTGTACGTCTCGATCAAGAACACGATCTCCGTCGCCCCCGCAGCGGCGGAGGCCAGAGGCTGAGTTACACCACCCGGAAGGAGCCGAGGGAGGAGAGGGTGGTGAAGGCGACGGAGAGGACAAACTCGGAAAAGGAAAAGGCAAGTGTTTTGAGAAAACAGAAATTCACTGACATGGCAAACAAGGCCGTCTCGAGATACGATCGCGACCCGGATTACCGGTTCCTCCACGAGCGCGTCTCGGATCTCTTTGCCGCTTGCTTGAAATCCGACCTCGAAAATCTCAACTCTAATGAGCTCAACAACATCAGCCTCGCCGCCAAGTGGTGCCCTTCGCTCGAATCGTCTTTTGATCGCGCCACTCTCCTCTGCGAAAGGATTGCAAAGAAGGTTTTCCCGCGCGAGTCGTGTCCGGAATACGACGGCGTTTTGGAGCAGCATTATGCTTACAGAGTCCGGGACCGGCTGAGGAAGGAAGTGCTTGTTCCTTTAAGGAAGGCTCTGGAGTTACCGGAGGTTTATATAGGGGCACGAAAATGGAGGTCCCTTCCTTACAATAGGGTCCCCTCCGTGGCCATGAAGCTTTACAAGGAAACGTTTTTTAAGCACGACCTTGTGAGGTTTTCGAAGTATTTGGTTGATGCAAAGGCCGGGAAGACCACCATTGCTGCTGGTGCTCTGCTGCCGCACGAGATCATTGCCTCGAATTCAAGAGGCAGTGATGGCGTGGCGGAGCTTCAGTGGAAGAGGATGGTGGAGGATTTGGTGAAGAAGGGGCAGCTGAAGAACTGCTTGGCTGTGTGTGACGTGTCAGGCAGCATGGAGGGGCTTCCTAGGGATGTGAGTGTGGCCTTGGGGCTTTTGGTTTCGGAATTAAGCCAAAAGCCGTGGAAAGGGAAGGTCATCACTTTTAGTGAGAAGCCTGAGCTGCATTTGATTGAAGGTGAAGATTTGAAGTCAAAGTGTAAGTTTATGAGGTCAATGGACTCGGGGTTCAACACCGATTTTCAAAAGGTGTTTGATCTGATACTTAGAGTGGCTGTAAAGGGGAACTTGAAGCCTGAGGATATGATAAAGAGGGTGTTTGTGTTTAGTGACATGGAGTTTGACGAGGCTAATCATGAGAGTACTTGGGAGACGGATTATGAGGCGATTCAGAGGAGGTTCAAGAGGAATGGTTATGGGAATGTGGTGCCTCAGATTGTGTTTTGGAATCTGAGGCACTCTATGTCTACGCCGGTGACGGAGAAGCAACCTGGGGTGGCAATGTTGAGTGGCTTTTCAAAGAATTTGTTGAAGTTGTTCTTGGATAATGATGGGGAAGTTAGCCCGGATATGGCCATGGAGTTGGCCATCTCCGGCGATGAGTATCAGAAGCTGGCCGTGGTCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PG_binding_1 Peptidase_M10

Protein Analysis

509

Amino Acids

58.04

Weight (kDa)

8.71

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 68 - 306 1.2e-85 Domain of unknown function (DUF2828)
DUF7788 PF25043 308 - 488 5.9e-79 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000309)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07510 FvH4_6g49990 FvH4_6g50000 FvH4_6g50010
malus_domestica MD04G1045600.v1.1 MD09G1040300.v1.1 MD09G1040400.v1.1 MD09G1040500.v1.1
prunus_persica Prupe.1G198800_v2.0.a1 Prupe.3G277800_v2.0.a1 Prupe.3G278000_v2.0.a1
pyrus_communis pycom17g03670 pycom17g03680 pycom17g03720 pycom17g03730
rosa_chinensis RchiOBHm_Chr2g0170151 RchiOBHm_Chr2g0170161 RchiOBHm_Chr2g0170221 RchiOBHm_Chr2g0170241 RchiOBHm_Chr2g0170251 RchiOBHm_Chr2g0171951 RchiOBHm_Chr4g0400091 RchiOBHm_Chr7g0222561 RchiOBHm_Chr7g0222571
rosa_laevigata RLG00000009215 RLG00000021923 RLG00000021924 RLG00000021929 RLG00000021930 RLG00000021931 RLG00000021932 RLG00000021936 RLG00000021937 RLG00000021938 RLG00000021940 RLG00000021941 RLG00000029406 RLG00000029407
rosa_multiflora Rmu_co8411991.1_g000001 Rmu_co8418277.1_g000001 Rmu_co8459115.1_g000001 Rmu_sc0000037.1_g000004 Rmu_sc0001605.1_g000012 Rmu_sc0001605.1_g000013 Rmu_sc0001605.1_g000018 Rmu_sc0001605.1_g000019 Rmu_sc0012468.1_g000004 Rmu_sc0012468.1_g000011 Rmu_sc0012468.1_g000017 Rmu_sc0012468.1_g000019 Rmu_sc0012468.1_g000026 Rmu_sc0036734.1_g000001 Rmu_sc0036734.1_g000002 Rmu_sc0036735.1_g000001 Rmu_sc0036735.1_g000002
rosa_roxburghii Rroxscaffold_2G00081470 Rroxscaffold_2G00081540 Rroxscaffold_2G00081550 Rroxscaffold_3G00236660 Rroxscaffold_5G00345030 Rroxscaffold_5G00345060
rosa_rugosa Rorug02G0546300 Rorug02G0546800 Rorug02G0546800 Rorug02G0546800 Rorug02G0546900 Rorug02G0547000.1 Rorug02G0547100 Rorug02G0547300 Rorug04G0022500 Rorug07G0210800 Rorug07G0210900
rosa_samantha Rh2AG618400 Rh2AG618700 Rh2AG618800 Rh2AG619000 Rh2AG619100 Rh2AG631500 Rh2AG631600 Rh2BG630000 Rh2BG644800 Rh2BG644900 Rh2CG599400 Rh2CG599500 Rh2CG599600 Rh2CG599700 Rh2DG642000 Rh2DG642200 Rh2DG642300 Rh2DG642400 Rh2DG642500 Rh2DG642800 Rh2DG642900 Rh4AG098000 Rh4BG096300 Rh4CG107400 Rh4DG092900 Rh7AG354000 Rh7AG354100 Rh7AG354500 Rh7AG354700 Rh7BG342900 Rh7CG371500 Rh7CG371600 Rh7DG349300 Rh7DG349400
rosa_wichuraiana Rw0G015130 Rw0G018360 Rw0G018370 Rw2G051210 Rw2G051220 Rw2G051230 Rw2G051240 Rw2G051260 Rw2G051270 Rw4G008170 Rw7G029780 Rw7G030120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 462, 1327
AccI GTMKAC 2 cut(s) 1367, 1524
AccII CGCG 5 cut(s) 342, 372, 492, 535, 537
AccIII TCCGGA 1 cut(s) 547
AclI AACGTT 1 cut(s) 731
AclWI GGATC 1 cut(s) 387
AcoI YGGCCR 4 cut(s) 708, 1473, 1485, 1515
AcsI RAATTY 3 cut(s) 299, 841, 1423
AcuI CTGAAG 2 cut(s) 857, 938
AfaI GTAC 2 cut(s) 141, 1264
AfiI CCNNNNNNNGG 5 cut(s) 179, 459, 706, 1028, 1471
AflIII ACRYGT 1 cut(s) 942
AgeI ACCGGT 1 cut(s) 354
AjiI CACGTC 1 cut(s) 943
AjnI CCWGG 1 cut(s) 1390
AjuI GAANNNNNNNTTGG 4 cut(s) 911, 943, 1424, 1456
AloI GAACNNNNNNTCC 6 cut(s) 147, 179, 341, 373, 1112, 1144
AluBI AGCT 7 cut(s) 86, 433, 718, 871, 916, 1063, 1513
AluI AGCT 7 cut(s) 86, 433, 718, 871, 916, 1063, 1513
Alw21I GWGCWC 2 cut(s) 435, 814
Alw26I GTCTC 4 cut(s) 149, 331, 379, 1265
AlwI GGATC 1 cut(s) 387
AlwNI CAGNNNCTG 2 cut(s) 196, 1513
Ama87I CYCGRG 2 cut(s) 328, 1123
Aor13HI TCCGGA 1 cut(s) 547
AoxI GGCC 8 cut(s) 187, 321, 708, 783, 984, 1473, 1485, 1515
ApeKI GCWGC 7 cut(s) 177, 571, 803, 817, 913, 951, 1063
ApoI RAATTY 3 cut(s) 299, 841, 1423
ArsI GACNNNNNNTTYG 4 cut(s) 52, 84, 1223, 1255
AsiGI ACCGGT 1 cut(s) 354
Asp700I GAANNNNTTC 2 cut(s) 527, 1436
AspA2I CCTAGG 1 cut(s) 968
AspLEI GCGC 3 cut(s) 372, 494, 537
AspS9I GGNCC 3 cut(s) 595, 678, 697
AsuC2I CCSGG 5 cut(s) 211, 347, 593, 787, 1466
AsuHPI GGTGA 4 cut(s) 250, 913, 1091, 1387
AsuII TTCGAA 1 cut(s) 761
AvaI CYCGRG 2 cut(s) 328, 1123
AvaII GGWCC 3 cut(s) 595, 678, 697
AvrII CCTAGG 1 cut(s) 968
AxyI CCTNAGG 1 cut(s) 1197
BaeGI GKGCMC 2 cut(s) 467, 667
BalI TGGCCA 3 cut(s) 710, 1475, 1487
BanI GGYRCC 2 cut(s) 462, 1327
BanII GRGCYC 1 cut(s) 435
BauI CACGAG 2 cut(s) 365, 824
BbsI GAAGAC 2 cut(s) 21, 797
Bbv12I GWGCWC 2 cut(s) 435, 814
BbvCI CCTCAGC 1 cut(s) 602
BbvI GCAGC 7 cut(s) 189, 583, 790, 804, 925, 963, 1050
BccI CCATC 4 cut(s) 851, 880, 1445, 1496
BceAI ACGGC 5 cut(s) 32, 308, 574, 1006, 1502
BcgI CGANNNNNNTGC 4 cut(s) 497, 531, 815, 849
BciT130I CCWGG 1 cut(s) 1392
BcnI CCSGG 5 cut(s) 211, 347, 593, 787, 1466
BcoDI GTCTC 4 cut(s) 149, 331, 379, 1265
BfaI CTAG 3 cut(s) 83, 107, 969
BlnI CCTAGG 1 cut(s) 968
BmcAI AGTACT 1 cut(s) 1264
Bme1390I CCNGG 6 cut(s) 211, 347, 593, 787, 1392, 1466
Bme18I GGWCC 3 cut(s) 595, 678, 697
BmeT110I CYCGRG 2 cut(s) 328, 1123
BmgBI CACGTC 1 cut(s) 943
BmgT120I GGNCC 3 cut(s) 595, 678, 697
BmiI GGNNCC 8 cut(s) 219, 359, 464, 596, 680, 698, 699, 1329
BmrFI CCNGG 6 cut(s) 211, 347, 593, 787, 1392, 1466
BmsI GCATC 1 cut(s) 766
BpiI GAAGAC 2 cut(s) 21, 797
BplI GAGNNNNNCTC 2 cut(s) 359, 391
BpmI CTGGAG 1 cut(s) 659
Bpu10I CCTNAGC 2 cut(s) 602, 1059
Bpu14I TTCGAA 1 cut(s) 761
BpuEI CTTGAG 3 cut(s) 72, 84, 102
BpuMI CCSGG 5 cut(s) 211, 347, 593, 787, 1466
BsaBI GATNNNNATC 1 cut(s) 1503
BsaJI CCNNGG 8 cut(s) 221, 705, 968, 987, 1022, 1391, 1476, 1518
BsaWI WCCGGW 3 cut(s) 354, 547, 646
BsaXI ACNNNNNCTCC 4 cut(s) 147, 177, 860, 890
Bsc4I CCNNNNNNNGG 5 cut(s) 179, 459, 706, 1028, 1471
Bse118I RCCGGY 3 cut(s) 354, 597, 1372
Bse21I CCTNAGG 1 cut(s) 1197
Bse3DI GCAATG 3 cut(s) 798, 831, 1407
Bse8I GATNNNNATC 1 cut(s) 1503
BseAI TCCGGA 1 cut(s) 547
BseBI CCWGG 1 cut(s) 1392
BseDI CCNNGG 8 cut(s) 221, 705, 968, 987, 1022, 1391, 1476, 1518
BseGI GGATG 2 cut(s) 891, 979
BseJI GATNNNNATC 1 cut(s) 1503
BseLI CCNNNNNNNGG 5 cut(s) 179, 459, 706, 1028, 1471
BseMI GCAATG 3 cut(s) 798, 831, 1407
BseMII CTCAG 6 cut(s) 188, 593, 1050, 1188, 1343, 1346
BseRI GAGGAG 3 cut(s) 242, 491, 1309
BseSI GKGCMC 2 cut(s) 467, 667
BseXI GCAGC 7 cut(s) 189, 583, 790, 804, 925, 963, 1050
Bsh1236I CGCG 5 cut(s) 342, 372, 492, 535, 537
Bsh1285I CGRYCG 1 cut(s) 340
BshFI GGCC 8 cut(s) 189, 323, 710, 785, 986, 1475, 1487, 1517
BshNI GGYRCC 2 cut(s) 462, 1327
BshTI ACCGGT 1 cut(s) 354
BsiEI CGRYCG 1 cut(s) 340
BsiHKAI GWGCWC 2 cut(s) 435, 814
BsiHKCI CYCGRG 2 cut(s) 328, 1123
BslFI GGGAC 3 cut(s) 608, 664, 683
BslI CCNNNNNNNGG 5 cut(s) 179, 459, 706, 1028, 1471
BsmAI GTCTC 4 cut(s) 149, 331, 379, 1265
BsmBI CGTCTC 4 cut(s) 149, 331, 379, 1265
BsmFI GGGAC 3 cut(s) 608, 664, 683
BsnI GGCC 8 cut(s) 189, 323, 710, 785, 986, 1475, 1487, 1517
BsoBI CYCGRG 2 cut(s) 328, 1123
Bsp119I TTCGAA 1 cut(s) 761
Bsp1286I GDGCHC 4 cut(s) 435, 467, 667, 814
Bsp13I TCCGGA 1 cut(s) 547
Bsp143I GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
Bsp19I CCATGG 1 cut(s) 1476
Bsp68I TCGCGA 1 cut(s) 342
BspANI GGCC 8 cut(s) 189, 323, 710, 785, 986, 1475, 1487, 1517
BspCNI CTCAG 6 cut(s) 189, 594, 1051, 1189, 1344, 1345
BspEI TCCGGA 1 cut(s) 547
BspFNI CGCG 5 cut(s) 342, 372, 492, 535, 537
BspHI TCATGA 1 cut(s) 1255
BspLI GGNNCC 8 cut(s) 219, 359, 464, 596, 680, 698, 699, 1329
BspPI GGATC 1 cut(s) 387
BspT104I TTCGAA 1 cut(s) 761
BspT107I GGYRCC 2 cut(s) 462, 1327
BsrDI GCAATG 3 cut(s) 798, 831, 1407
BsrFI RCCGGY 3 cut(s) 354, 597, 1372
BssAI RCCGGY 3 cut(s) 354, 597, 1372
BssECI CCNNGG 8 cut(s) 221, 705, 968, 987, 1022, 1391, 1476, 1518
BssMI GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
BssSI CACGAG 2 cut(s) 365, 824
BssT1I CCWWGG 3 cut(s) 968, 987, 1476
Bst2BI CACGAG 2 cut(s) 365, 824
Bst2UI CCWGG 1 cut(s) 1392
Bst4CI ACNGT 1 cut(s) 139
Bst6I CTCTTC 1 cut(s) 875
BstBI TTCGAA 1 cut(s) 761
BstC8I GCNNGC 2 cut(s) 394, 1515
BstDEI CTNAG 7 cut(s) 197, 602, 1059, 1166, 1197, 1332, 1352
BstDSI CCRYGG 4 cut(s) 705, 1022, 1476, 1518
BstF5I GGATG 2 cut(s) 891, 979
BstFNI CGCG 5 cut(s) 342, 372, 492, 535, 537
BstHHI GCGC 3 cut(s) 372, 494, 537
BstKTI GATC 7 cut(s) 151, 163, 340, 382, 490, 831, 1159
BstMAI GTCTC 4 cut(s) 149, 331, 379, 1265
BstMBI GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
BstMCI CGRYCG 1 cut(s) 340
BstMWI GCNNNNNNNGC 6 cut(s) 177, 186, 320, 809, 858, 1063
BstNI CCWGG 1 cut(s) 1392
BstSCI CCNGG 6 cut(s) 209, 345, 591, 785, 1390, 1464
BstSLI GKGCMC 2 cut(s) 467, 667
BstUI CGCG 5 cut(s) 342, 372, 492, 535, 537
BstV1I GCAGC 7 cut(s) 189, 583, 790, 804, 925, 963, 1050
BstV2I GAAGAC 2 cut(s) 21, 797
BstX2I RGATCY 1 cut(s) 379
BstXI CCANNNNNNTGG 1 cut(s) 1483
BstYI RGATCY 1 cut(s) 379
Bsu36I CCTNAGG 1 cut(s) 1197
BsuRI GGCC 8 cut(s) 189, 323, 710, 785, 986, 1475, 1487, 1517
BtgI CCRYGG 4 cut(s) 705, 1022, 1476, 1518
BtgZI GCGATG 1 cut(s) 1512
BtrI CACGTC 1 cut(s) 943
BtsCI GGATG 2 cut(s) 891, 979
BtsI GCAGTG 1 cut(s) 859
BtsIMutI CAGTG 3 cut(s) 303, 859, 881
BtuMI TCGCGA 1 cut(s) 342
Cac8I GCNNGC 2 cut(s) 394, 1515
CaiI CAGNNNCTG 2 cut(s) 196, 1513
CciI TCATGA 1 cut(s) 1255
CfoI GCGC 3 cut(s) 372, 494, 537
Cfr10I RCCGGY 3 cut(s) 354, 597, 1372
Cfr13I GGNCC 3 cut(s) 595, 678, 697
CseI GACGC 1 cut(s) 361
Csp6I GTAC 2 cut(s) 140, 1263
CspAI ACCGGT 1 cut(s) 354
CspCI CAANNNNNGTGG 2 cut(s) 1004, 1039
CviAII CATG 6 cut(s) 310, 712, 955, 1234, 1256, 1477
CviQI GTAC 2 cut(s) 140, 1263
DdeI CTNAG 7 cut(s) 197, 602, 1059, 1166, 1197, 1332, 1352
DpnI GATC 7 cut(s) 150, 162, 339, 381, 489, 830, 1158
DpnII GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
EaeI YGGCCR 4 cut(s) 708, 1473, 1485, 1515
Eam1104I CTCTTC 1 cut(s) 875
EarI CTCTTC 1 cut(s) 875
EciI GGCGGA 2 cut(s) 198, 881
Ecl136II GAGCTC 1 cut(s) 433
Eco130I CCWWGG 3 cut(s) 968, 987, 1476
Eco24I GRGCYC 1 cut(s) 435
Eco47I GGWCC 3 cut(s) 595, 678, 697
Eco53kI GAGCTC 1 cut(s) 433
Eco57I CTGAAG 2 cut(s) 857, 938
Eco81I CCTNAGG 1 cut(s) 1197
Eco88I CYCGRG 2 cut(s) 328, 1123
EcoICRI GAGCTC 1 cut(s) 433
EcoO109I RGGNCCY 2 cut(s) 678, 697
EcoRI GAATTC 1 cut(s) 841
EcoRII CCWGG 1 cut(s) 1390
EcoT14I CCWWGG 3 cut(s) 968, 987, 1476
EcoT38I GRGCYC 1 cut(s) 435
ErhI CCWWGG 3 cut(s) 968, 987, 1476
Esp3I CGTCTC 4 cut(s) 149, 331, 379, 1265
FaeI CATG 6 cut(s) 313, 715, 958, 1237, 1259, 1480
FalI AAGNNNNNCTT 6 cut(s) 911, 943, 1172, 1204, 1424, 1456
FaqI GGGAC 3 cut(s) 608, 664, 683
FatI CATG 6 cut(s) 309, 711, 954, 1233, 1255, 1476
FauI CCCGC 3 cut(s) 49, 182, 540
FblI GTMKAC 2 cut(s) 1367, 1524
FokI GGATG 2 cut(s) 898, 986
FriOI GRGCYC 1 cut(s) 435
FspBI CTAG 3 cut(s) 83, 107, 969
GlaI GCGC 3 cut(s) 371, 493, 536
GsuI CTGGAG 1 cut(s) 659
HaeIII GGCC 8 cut(s) 189, 323, 710, 785, 986, 1475, 1487, 1517
HgaI GACGC 1 cut(s) 361
HhaI GCGC 3 cut(s) 372, 494, 537
Hin1II CATG 6 cut(s) 313, 715, 958, 1237, 1259, 1480
Hin6I GCGC 3 cut(s) 370, 492, 535
HinP1I GCGC 3 cut(s) 370, 492, 535
HincII GTYRAC 1 cut(s) 1525
HindII GTYRAC 1 cut(s) 1525
HindIII AAGCTT 1 cut(s) 716
HinfI GANTC 6 cut(s) 476, 539, 588, 1121, 1288, 1348
HphI GGTGA 4 cut(s) 250, 913, 1091, 1387
Hpy166II GTNNAC 2 cut(s) 1368, 1525
Hpy188I TCNGA 9 cut(s) 265, 379, 406, 1006, 1161, 1293, 1335, 1353, 1509
Hpy8I GTNNAC 2 cut(s) 1368, 1525
Hpy99I CGWCG 3 cut(s) 171, 250, 560
HpyCH4III ACNGT 1 cut(s) 139
HpyCH4IV ACGT 4 cut(s) 72, 142, 731, 942
HpyCH4V TGCA 3 cut(s) 518, 779, 1066
HpyF10VI GCNNNNNNNGC 6 cut(s) 177, 186, 320, 809, 858, 1063
HpyF3I CTNAG 7 cut(s) 197, 602, 1059, 1166, 1197, 1332, 1352
HpySE526I ACGT 4 cut(s) 72, 142, 731, 942
Hsp92II CATG 6 cut(s) 313, 715, 958, 1237, 1259, 1480
HspAI GCGC 3 cut(s) 370, 492, 535
KflI GGGWCCC 1 cut(s) 697
Kpn2I TCCGGA 1 cut(s) 547
Kzo9I GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
LmnI GCTCC 3 cut(s) 217, 568, 868
Lsp1109I GCAGC 7 cut(s) 189, 583, 790, 804, 925, 963, 1050
LweI GCATC 1 cut(s) 766
MaeI CTAG 3 cut(s) 83, 107, 969
MaeII ACGT 4 cut(s) 72, 142, 731, 942
MaeIII GTNAC 6 cut(s) 68, 200, 642, 938, 1229, 1375
MalI GATC 7 cut(s) 150, 162, 339, 381, 489, 830, 1158
MboI GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
MboII GAAGA 6 cut(s) 26, 802, 892, 916, 931, 1094
MflI RGATCY 1 cut(s) 379
MhlI GDGCHC 4 cut(s) 435, 467, 667, 814
MlsI TGGCCA 3 cut(s) 710, 1475, 1487
MluCI AATT 4 cut(s) 299, 841, 1007, 1423
MluNI TGGCCA 3 cut(s) 710, 1475, 1487
MlyI GAGTC 3 cut(s) 548, 597, 1115
MmeI TCCRAC 1 cut(s) 429
Mox20I TGGCCA 3 cut(s) 710, 1475, 1487
MroI TCCGGA 1 cut(s) 547
MroXI GAANNNNTTC 2 cut(s) 527, 1436
MscI TGGCCA 3 cut(s) 710, 1475, 1487
MseI TTAA 3 cut(s) 626, 738, 1010
MslI CAYNNNNRTG 2 cut(s) 308, 670
Msp20I TGGCCA 3 cut(s) 710, 1475, 1487
MspA1I CMGCKG 2 cut(s) 180, 916
MspR9I CCNGG 6 cut(s) 211, 347, 593, 787, 1392, 1466
MvaI CCWGG 1 cut(s) 1392
MvnI CGCG 5 cut(s) 342, 372, 492, 535, 537
MwoI GCNNNNNNNGC 6 cut(s) 177, 186, 320, 809, 858, 1063
NciI CCSGG 5 cut(s) 211, 347, 593, 787, 1466
NcoI CCATGG 1 cut(s) 1476
NdeII GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
NlaIII CATG 6 cut(s) 313, 715, 958, 1237, 1259, 1480
NlaIV GGNNCC 8 cut(s) 219, 359, 464, 596, 680, 698, 699, 1329
NmeAIII GCCGAG 1 cut(s) 246
NmuCI GTSAC 4 cut(s) 68, 938, 1229, 1375
NruI TCGCGA 1 cut(s) 342
NspV TTCGAA 1 cut(s) 761
PaeR7I CTCGAG 1 cut(s) 328
PagI TCATGA 1 cut(s) 1255
PcsI WCGNNNNNNNCGW 1 cut(s) 476
PdmI GAANNNNTTC 2 cut(s) 527, 1436
PfeI GAWTC 3 cut(s) 476, 1288, 1348
PfoI TCCNGGA 1 cut(s) 591
PinAI ACCGGT 1 cut(s) 354
Ple19I CGATCG 1 cut(s) 340
PleI GAGTC 3 cut(s) 547, 596, 1115
PpsI GAGTC 3 cut(s) 547, 596, 1115
PpuMI RGGWCCY 2 cut(s) 678, 697
Psp124BI GAGCTC 1 cut(s) 435
Psp1406I AACGTT 1 cut(s) 731
Psp5II RGGWCCY 2 cut(s) 678, 697
Psp6I CCWGG 1 cut(s) 1390
PspGI CCWGG 1 cut(s) 1390
PspN4I GGNNCC 8 cut(s) 219, 359, 464, 596, 680, 698, 699, 1329
PspPI GGNCC 3 cut(s) 595, 678, 697
PspPPI RGGWCCY 2 cut(s) 678, 697
PstNI CAGNNNCTG 2 cut(s) 196, 1513
PsuI RGATCY 1 cut(s) 379
PvuI CGATCG 1 cut(s) 340
PvuII CAGCTG 1 cut(s) 916
RruI TCGCGA 1 cut(s) 342
RsaI GTAC 2 cut(s) 141, 1264
RsaNI GTAC 2 cut(s) 140, 1263
RseI CAYNNNNRTG 2 cut(s) 308, 670
SacI GAGCTC 1 cut(s) 435
SalI GTCGAC 1 cut(s) 1523
SaqAI TTAA 3 cut(s) 626, 738, 1010
Sau3AI GATC 7 cut(s) 148, 160, 337, 379, 487, 828, 1156
Sau96I GGNCC 3 cut(s) 595, 678, 697
ScaI AGTACT 1 cut(s) 1264
SchI GAGTC 3 cut(s) 548, 597, 1115
ScrFI CCNGG 6 cut(s) 211, 347, 593, 787, 1392, 1466
SduI GDGCHC 4 cut(s) 435, 467, 667, 814
SfaNI GCATC 1 cut(s) 766
Sfr274I CTCGAG 1 cut(s) 328
SfuI TTCGAA 1 cut(s) 761
SgrAI CRCCGGYG 1 cut(s) 1372
SinI GGWCC 3 cut(s) 595, 678, 697
SlaI CTCGAG 1 cut(s) 328
SmiMI CAYNNNNRTG 2 cut(s) 308, 670
SmlI CTYRAG 4 cut(s) 87, 99, 117, 328
SmoI CTYRAG 4 cut(s) 87, 99, 117, 328
Sse9I AATT 4 cut(s) 299, 841, 1007, 1423
SspMI CTAG 3 cut(s) 83, 107, 969
SstI GAGCTC 1 cut(s) 435
StyD4I CCNGG 6 cut(s) 209, 345, 591, 785, 1390, 1464
StyI CCWWGG 3 cut(s) 968, 987, 1476
TaaI ACNGT 1 cut(s) 139
TaiI ACGT 4 cut(s) 75, 145, 734, 945
TaqI TCGA 7 cut(s) 147, 329, 411, 474, 761, 839, 1524
TasI AATT 4 cut(s) 299, 841, 1007, 1423
TatI WGTACW 1 cut(s) 1262
TauI GCSGC 5 cut(s) 47, 183, 392, 455, 823
TfiI GAWTC 3 cut(s) 476, 1288, 1348
Tru1I TTAA 3 cut(s) 626, 738, 1010
Tru9I TTAA 3 cut(s) 626, 738, 1010
TscAI CASTG 3 cut(s) 310, 859, 881
TseFI GTSAC 4 cut(s) 68, 938, 1229, 1375
TseI GCWGC 7 cut(s) 177, 571, 803, 817, 913, 951, 1063
Tsp45I GTSAC 4 cut(s) 68, 938, 1229, 1375
TspDTI ATGAA 1 cut(s) 728
TspGWI ACGGA 6 cut(s) 56, 155, 263, 694, 1289, 1394
TspRI CASTG 3 cut(s) 310, 859, 881
VpaK11BI GGWCC 3 cut(s) 595, 678, 697
XapI RAATTY 3 cut(s) 299, 841, 1423
XhoI CTCGAG 1 cut(s) 328
XmaJI CCTAGG 1 cut(s) 968
XmiI GTMKAC 2 cut(s) 1367, 1524
XmnI GAANNNNTTC 2 cut(s) 527, 1436
XspI CTAG 3 cut(s) 83, 107, 969
ZrmI AGTACT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.