Rh4CG033700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
6805596 .. 6808918
3323 bp
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UTR
Exon/CDS
Intron
Rh4CG033700.1

Sequence Viewer

Length: 390 bp
ATGTTCCATAATTACGCGCTGCCATTTGTCTTCTCCCCAATTCCAGATTCGTCCAAGTATAATATCTCCATTTGTCTTCTTCCCACATTCTGGATTTCTCTACACTTCTACCATATGTCCTCATCATATAAAGCGGCTCAATCAGTTGCTGGTTTCTTCGGGAAGCGTCGGCAAACACAATTTTTTCACTATTTCAGATTTGCAATCACCATCAGTTGTGTCATTCATCAAATAGAGTTTGGCTTCCTTTCGATAACATTAAGTCTTCAAGATTATCAGGAGTCTATGCAAAGGAGTATCTGGATTGTTCTTTTGCCTCTATTCCTGGTTTTGTTGCTTGGTGTTAGTTTGGTGTCCTATTGTTATTCAGATATTGGGAACAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

129

Amino Acids

14.97

Weight (kDa)

7.77

Isoelectric Point (pI)

69.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 90
AccII CGCG 1 cut(s) 17
AciI CCGC 1 cut(s) 134
AfiI CCNNNNNNNGG 1 cut(s) 90
AgsI TTSAA 1 cut(s) 269
AjnI CCWGG 1 cut(s) 324
AjuI GAANNNNNNNTTGG 2 cut(s) 31, 63
AlwNI CAGNNNCTG 1 cut(s) 149
ApeKI GCWGC 1 cut(s) 19
AspLEI GCGC 1 cut(s) 19
AsuHPI GGTGA 1 cut(s) 199
BbsI GAAGAC 3 cut(s) 22, 68, 257
BbvI GCAGC 1 cut(s) 6
BccI CCATC 1 cut(s) 218
BciT130I CCWGG 1 cut(s) 326
BisI GCNGC 2 cut(s) 20, 135
BlsI GCNGC 2 cut(s) 21, 136
Bme1390I CCNGG 1 cut(s) 326
BmrFI CCNGG 1 cut(s) 326
BpiI GAAGAC 3 cut(s) 22, 68, 257
Bsc4I CCNNNNNNNGG 1 cut(s) 90
BseBI CCWGG 1 cut(s) 326
BseLI CCNNNNNNNGG 1 cut(s) 90
BseXI GCAGC 1 cut(s) 6
Bsh1236I CGCG 1 cut(s) 17
BslI CCNNNNNNNGG 1 cut(s) 90
BspACI CCGC 1 cut(s) 134
BspFNI CGCG 1 cut(s) 17
Bst2UI CCWGG 1 cut(s) 326
Bst4CI ACNGT 1 cut(s) 383
BstFNI CGCG 1 cut(s) 17
BstHHI GCGC 1 cut(s) 19
BstNI CCWGG 1 cut(s) 326
BstSCI CCNGG 1 cut(s) 324
BstUI CGCG 1 cut(s) 17
BstV1I GCAGC 1 cut(s) 6
BstV2I GAAGAC 3 cut(s) 22, 68, 257
BtsIMutI CAGTG 1 cut(s) 388
CaiI CAGNNNCTG 1 cut(s) 149
CfoI GCGC 1 cut(s) 19
CseI GACGC 1 cut(s) 155
CviJI RGCY 2 cut(s) 137, 243
CviKI_1 RGCY 2 cut(s) 137, 243
EcoRII CCWGG 1 cut(s) 324
FaiI YATR 7 cut(s) 9, 60, 114, 116, 127, 129, 287
FauNDI CATATG 1 cut(s) 114
Fnu4HI GCNGC 2 cut(s) 20, 135
Fsp4HI GCNGC 2 cut(s) 20, 135
GlaI GCGC 1 cut(s) 18
GluI GCNGC 2 cut(s) 20, 135
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 19
Hin6I GCGC 1 cut(s) 17
HinP1I GCGC 1 cut(s) 17
HinfI GANTC 2 cut(s) 47, 281
HphI GGTGA 1 cut(s) 199
Hpy188I TCNGA 2 cut(s) 197, 370
Hpy188III TCNNGA 6 cut(s) 44, 91, 160, 269, 278, 301
Hpy99I CGWCG 1 cut(s) 171
HpyCH4III ACNGT 1 cut(s) 383
HpyCH4V TGCA 2 cut(s) 203, 289
HspAI GCGC 1 cut(s) 17
LpnPI CCDG 7 cut(s) 57, 76, 135, 263, 286, 311, 338
Lsp1109I GCAGC 1 cut(s) 6
MboII GAAGA 5 cut(s) 22, 68, 71, 148, 257
MluCI AATT 3 cut(s) 10, 39, 179
MlyI GAGTC 1 cut(s) 290
MnlI CCTC 2 cut(s) 130, 327
MseI TTAA 1 cut(s) 260
MspR9I CCNGG 1 cut(s) 326
MvaI CCWGG 1 cut(s) 326
MvnI CGCG 1 cut(s) 17
NdeI CATATG 1 cut(s) 114
PfeI GAWTC 1 cut(s) 47
PflMI CCANNNNNTGG 1 cut(s) 90
PkrI GCNGC 2 cut(s) 21, 136
PleI GAGTC 1 cut(s) 289
PpsI GAGTC 1 cut(s) 289
Psp6I CCWGG 1 cut(s) 324
PspGI CCWGG 1 cut(s) 324
PstNI CAGNNNCTG 1 cut(s) 149
SaqAI TTAA 1 cut(s) 260
SatI GCNGC 2 cut(s) 20, 135
SchI GAGTC 1 cut(s) 290
ScrFI CCNGG 1 cut(s) 326
Sse9I AATT 3 cut(s) 10, 39, 179
SsiI CCGC 1 cut(s) 134
StyD4I CCNGG 1 cut(s) 324
TaaI ACNGT 1 cut(s) 383
TaqI TCGA 1 cut(s) 251
TasI AATT 3 cut(s) 10, 39, 179
TauI GCSGC 1 cut(s) 137
TfiI GAWTC 1 cut(s) 47
Tru1I TTAA 1 cut(s) 260
Tru9I TTAA 1 cut(s) 260
TscAI CASTG 1 cut(s) 388
TseI GCWGC 1 cut(s) 19
TspDTI ATGAA 1 cut(s) 215
TspRI CASTG 1 cut(s) 388
Van91I CCANNNNNTGG 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.