Rh6BG137300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
21960237 .. 21990445
30209 bp
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UTR
Exon/CDS
Intron
Rh6BG137300.1

Sequence Viewer

Length: 363 bp
ATGGATTCGGAAGACTTACCGTTGCGCCGACCTCCTCGCCTCTTCACAGAGACAGAAACAGCAAAAGCCGCCACCAGTTCAACAGTGCTCTGGATTCGGAAGACTTACCTGTTGCATTCGCTCATCGTTCAAACATTGAATGAACCTCAGAATGTAGATGCATTTGAACATAATGAGAATGAAGTTAGAGGTGATTATCAGCATACTGTTGCACCTCTCCGCAAAGATGCAGAGATTGGACGAAAGCGCACATTGAGGAGAAAGAAGACATTGTCAGAACAGTTTTCTGCTGAAAATTGTGCAATTGGTGAGACAATTGAGCAAGGAAGAACTGACGATAATTTTCTTCAGGTTATGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

120

Amino Acids

13.84

Weight (kDa)

5.93

Isoelectric Point (pI)

55.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 69, 220
AcuI CTGAAG 1 cut(s) 332
AgsI TTSAA 4 cut(s) 81, 131, 139, 167
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 2 cut(s) 44, 305
AspLEI GCGC 2 cut(s) 27, 249
AsuHPI GGTGA 2 cut(s) 203, 320
BbsI GAAGAC 3 cut(s) 18, 107, 272
Bbv12I GWGCWC 1 cut(s) 90
BcoDI GTCTC 2 cut(s) 44, 305
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
BmsI GCATC 2 cut(s) 148, 217
BpiI GAAGAC 3 cut(s) 18, 107, 272
Bse1I ACTGG 1 cut(s) 75
BseMII CTCAG 1 cut(s) 161
BseNI ACTGG 1 cut(s) 75
BseRI GAGGAG 2 cut(s) 24, 271
BsiHKAI GWGCWC 1 cut(s) 90
BsmAI GTCTC 2 cut(s) 44, 305
BsmI GAATGC 1 cut(s) 115
Bsp1286I GDGCHC 1 cut(s) 90
BspACI CCGC 2 cut(s) 69, 220
BspCNI CTCAG 1 cut(s) 160
BsrI ACTGG 1 cut(s) 75
Bst4CI ACNGT 4 cut(s) 21, 85, 208, 282
Bst6I CTCTTC 1 cut(s) 47
BstDEI CTNAG 1 cut(s) 147
BstHHI GCGC 2 cut(s) 27, 249
BstMAI GTCTC 2 cut(s) 44, 305
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstV2I GAAGAC 3 cut(s) 18, 107, 272
BtsIMutI CAGTG 1 cut(s) 90
CfoI GCGC 2 cut(s) 27, 249
CviJI RGCY 1 cut(s) 68
CviKI_1 RGCY 1 cut(s) 68
DdeI CTNAG 1 cut(s) 147
Eam1104I CTCTTC 1 cut(s) 47
EarI CTCTTC 1 cut(s) 47
Eco57I CTGAAG 1 cut(s) 332
EcoT22I ATGCAT 1 cut(s) 163
FaiI YATR 3 cut(s) 171, 204, 356
Fnu4HI GCNGC 1 cut(s) 69
Fsp4HI GCNGC 1 cut(s) 69
GlaI GCGC 2 cut(s) 26, 248
GluI GCNGC 1 cut(s) 69
HhaI GCGC 2 cut(s) 27, 249
Hin6I GCGC 2 cut(s) 25, 247
HinP1I GCGC 2 cut(s) 25, 247
HinfI GANTC 2 cut(s) 5, 94
HphI GGTGA 2 cut(s) 203, 320
Hpy188I TCNGA 4 cut(s) 10, 99, 150, 277
Hpy188III TCNNGA 1 cut(s) 91
HpyCH4III ACNGT 4 cut(s) 21, 85, 208, 282
HpyCH4V TGCA 5 cut(s) 115, 161, 212, 230, 302
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 147
HspAI GCGC 2 cut(s) 25, 247
LpnPI CCDG 4 cut(s) 76, 88, 122, 335
LweI GCATC 2 cut(s) 148, 217
MboII GAAGA 6 cut(s) 23, 34, 112, 277, 338, 339
MfeI CAATTG 2 cut(s) 303, 315
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 4 cut(s) 295, 303, 315, 340
MnlI CCTC 7 cut(s) 42, 45, 50, 156, 182, 225, 249
Mph1103I ATGCAT 1 cut(s) 163
MunI CAATTG 2 cut(s) 303, 315
Mva1269I GAATGC 1 cut(s) 115
MwoI GCNNNNNNNGC 1 cut(s) 68
NsiI ATGCAT 1 cut(s) 163
PctI GAATGC 1 cut(s) 115
PfeI GAWTC 2 cut(s) 5, 94
PflFI GACNNNGTC 1 cut(s) 271
PkrI GCNGC 1 cut(s) 70
PsyI GACNNNGTC 1 cut(s) 271
SatI GCNGC 1 cut(s) 69
SduI GDGCHC 1 cut(s) 90
SetI ASST 6 cut(s) 34, 111, 148, 193, 217, 354
SfaNI GCATC 2 cut(s) 148, 217
SgeI CNNG 5 cut(s) 48, 87, 103, 121, 335
Sse9I AATT 4 cut(s) 295, 303, 315, 340
SsiI CCGC 2 cut(s) 69, 220
TaaI ACNGT 4 cut(s) 21, 85, 208, 282
TasI AATT 4 cut(s) 295, 303, 315, 340
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 2 cut(s) 5, 94
TscAI CASTG 1 cut(s) 90
TspDTI ATGAA 2 cut(s) 156, 195
TspRI CASTG 1 cut(s) 90
Tth111I GACNNNGTC 1 cut(s) 271
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.