WD40 repeats
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 434 |
| AccB1I | GGYRCC | 2 cut(s) | 138, 776 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 758 |
| AccI | GTMKAC | 1 cut(s) | 679 |
| AciI | CCGC | 9 cut(s) | 103, 333, 336, 357, 377, 459, 558, 789, 842 |
| AclWI | GGATC | 2 cut(s) | 250, 928 |
| AcoI | YGGCCR | 4 cut(s) | 249, 396, 832, 848 |
| AcyI | GRCGYC | 1 cut(s) | 90 |
| AfaI | GTAC | 2 cut(s) | 7, 468 |
| AgeI | ACCGGT | 1 cut(s) | 82 |
| AgsI | TTSAA | 5 cut(s) | 816, 857, 863, 869, 895 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 588 |
| AjnI | CCWGG | 4 cut(s) | 141, 405, 735, 779 |
| AluBI | AGCT | 2 cut(s) | 454, 733 |
| AluI | AGCT | 2 cut(s) | 454, 733 |
| Alw21I | GWGCWC | 1 cut(s) | 735 |
| Alw26I | GTCTC | 3 cut(s) | 532, 538, 747 |
| AlwI | GGATC | 2 cut(s) | 250, 928 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 758 |
| ApeKI | GCWGC | 1 cut(s) | 765 |
| AsiGI | ACCGGT | 1 cut(s) | 82 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 665 |
| AspS9I | GGNCC | 4 cut(s) | 168, 204, 216, 231 |
| AsuC2I | CCSGG | 2 cut(s) | 189, 286 |
| AsuHPI | GGTGA | 2 cut(s) | 383, 718 |
| AsuII | TTCGAA | 1 cut(s) | 42 |
| AvaII | GGWCC | 1 cut(s) | 216 |
| BalI | TGGCCA | 1 cut(s) | 251 |
| BanI | GGYRCC | 2 cut(s) | 138, 776 |
| BanII | GRGCYC | 1 cut(s) | 735 |
| BbsI | GAAGAC | 1 cut(s) | 85 |
| Bbv12I | GWGCWC | 1 cut(s) | 735 |
| BbvI | GCAGC | 1 cut(s) | 752 |
| BccI | CCATC | 2 cut(s) | 479, 694 |
| BceAI | ACGGC | 3 cut(s) | 143, 419, 819 |
| BciT130I | CCWGG | 4 cut(s) | 143, 407, 737, 781 |
| BclI | TGATCA | 1 cut(s) | 820 |
| BcnI | CCSGG | 2 cut(s) | 189, 286 |
| BcoDI | GTCTC | 3 cut(s) | 532, 538, 747 |
| BfmI | CTRYAG | 2 cut(s) | 66, 305 |
| BisI | GCNGC | 4 cut(s) | 334, 357, 766, 843 |
| BlsI | GCNGC | 4 cut(s) | 335, 358, 767, 844 |
| Bme1390I | CCNGG | 6 cut(s) | 143, 189, 286, 407, 737, 781 |
| Bme18I | GGWCC | 1 cut(s) | 216 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 588 |
| BmgT120I | GGNCC | 4 cut(s) | 168, 204, 216, 231 |
| BmiI | GGNNCC | 5 cut(s) | 140, 217, 340, 433, 778 |
| BmrFI | CCNGG | 6 cut(s) | 143, 189, 286, 407, 737, 781 |
| BmrI | ACTGGG | 1 cut(s) | 396 |
| BmuI | ACTGGG | 1 cut(s) | 396 |
| BpiI | GAAGAC | 1 cut(s) | 85 |
| BpmI | CTGGAG | 2 cut(s) | 719, 735 |
| Bpu14I | TTCGAA | 1 cut(s) | 42 |
| BpuMI | CCSGG | 2 cut(s) | 189, 286 |
| BsaHI | GRCGYC | 1 cut(s) | 90 |
| BsaI | GGTCTC | 1 cut(s) | 538 |
| BsaJI | CCNNGG | 5 cut(s) | 188, 227, 285, 780, 901 |
| BsaWI | WCCGGW | 2 cut(s) | 82, 118 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 208, 238, 516, 546 |
| Bse118I | RCCGGY | 3 cut(s) | 82, 398, 773 |
| Bse1I | ACTGG | 3 cut(s) | 391, 752, 922 |
| Bse3DI | GCAATG | 2 cut(s) | 513, 648 |
| BseBI | CCWGG | 4 cut(s) | 143, 407, 737, 781 |
| BseDI | CCNNGG | 5 cut(s) | 188, 227, 285, 780, 901 |
| BseGI | GGATG | 2 cut(s) | 99, 115 |
| BseMI | GCAATG | 2 cut(s) | 513, 648 |
| BseMII | CTCAG | 3 cut(s) | 335, 501, 557 |
| BseNI | ACTGG | 3 cut(s) | 391, 752, 922 |
| BseRI | GAGGAG | 2 cut(s) | 213, 707 |
| BseX3I | CGGCCG | 1 cut(s) | 832 |
| BseXI | GCAGC | 1 cut(s) | 752 |
| BsgI | GTGCAG | 1 cut(s) | 165 |
| Bsh1285I | CGRYCG | 3 cut(s) | 87, 123, 835 |
| BshNI | GGYRCC | 2 cut(s) | 138, 776 |
| BshTI | ACCGGT | 1 cut(s) | 82 |
| BsiEI | CGRYCG | 3 cut(s) | 87, 123, 835 |
| BsiHKAI | GWGCWC | 1 cut(s) | 735 |
| BsiSI | CCGG | 7 cut(s) | 83, 119, 188, 285, 360, 399, 774 |
| BslFI | GGGAC | 3 cut(s) | 205, 229, 584 |
| BsmAI | GTCTC | 3 cut(s) | 532, 538, 747 |
| BsmFI | GGGAC | 3 cut(s) | 205, 229, 584 |
| Bso31I | GGTCTC | 1 cut(s) | 538 |
| Bsp119I | TTCGAA | 1 cut(s) | 42 |
| Bsp1286I | GDGCHC | 1 cut(s) | 735 |
| Bsp143I | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| Bsp19I | CCATGG | 2 cut(s) | 227, 901 |
| BspACI | CCGC | 9 cut(s) | 103, 333, 336, 357, 377, 459, 558, 789, 842 |
| BspCNI | CTCAG | 3 cut(s) | 334, 500, 556 |
| BspLI | GGNNCC | 5 cut(s) | 140, 217, 340, 433, 778 |
| BspMAI | CTGCAG | 1 cut(s) | 309 |
| BspPI | GGATC | 2 cut(s) | 250, 928 |
| BspT104I | TTCGAA | 1 cut(s) | 42 |
| BspT107I | GGYRCC | 2 cut(s) | 138, 776 |
| BspTNI | GGTCTC | 1 cut(s) | 538 |
| BsrDI | GCAATG | 2 cut(s) | 513, 648 |
| BsrFI | RCCGGY | 3 cut(s) | 82, 398, 773 |
| BsrI | ACTGG | 3 cut(s) | 391, 752, 922 |
| BssAI | RCCGGY | 3 cut(s) | 82, 398, 773 |
| BssECI | CCNNGG | 5 cut(s) | 188, 227, 285, 780, 901 |
| BssMI | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| BssNAI | GTATAC | 1 cut(s) | 680 |
| BssNI | GRCGYC | 1 cut(s) | 90 |
| BssT1I | CCWWGG | 2 cut(s) | 227, 901 |
| Bst1107I | GTATAC | 1 cut(s) | 680 |
| Bst2UI | CCWGG | 4 cut(s) | 143, 407, 737, 781 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 621 |
| Bst6I | CTCTTC | 1 cut(s) | 55 |
| BstACI | GRCGYC | 1 cut(s) | 90 |
| BstBI | TTCGAA | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 2 cut(s) | 34, 148 |
| BstDEI | CTNAG | 3 cut(s) | 321, 487, 543 |
| BstDSI | CCRYGG | 2 cut(s) | 227, 901 |
| BstF5I | GGATG | 2 cut(s) | 99, 115 |
| BstKTI | GATC | 5 cut(s) | 258, 369, 568, 823, 923 |
| BstMAI | GTCTC | 3 cut(s) | 532, 538, 747 |
| BstMBI | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| BstMCI | CGRYCG | 3 cut(s) | 87, 123, 835 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 353 |
| BstNI | CCWGG | 4 cut(s) | 143, 407, 737, 781 |
| BstSCI | CCNGG | 6 cut(s) | 141, 187, 284, 405, 735, 779 |
| BstSFI | CTRYAG | 2 cut(s) | 66, 305 |
| BstV1I | GCAGC | 1 cut(s) | 752 |
| BstV2I | GAAGAC | 1 cut(s) | 85 |
| BstX2I | RGATCY | 1 cut(s) | 920 |
| BstYI | RGATCY | 1 cut(s) | 920 |
| BstZ17I | GTATAC | 1 cut(s) | 680 |
| BstZI | CGGCCG | 1 cut(s) | 832 |
| BtgI | CCRYGG | 2 cut(s) | 227, 901 |
| BtsCI | GGATG | 2 cut(s) | 99, 115 |
| BtsI | GCAGTG | 3 cut(s) | 31, 182, 314 |
| BtsIMutI | CAGTG | 3 cut(s) | 31, 182, 314 |
| Cac8I | GCNNGC | 2 cut(s) | 34, 148 |
| CaiI | CAGNNNCTG | 1 cut(s) | 758 |
| Cfr10I | RCCGGY | 3 cut(s) | 82, 398, 773 |
| Cfr13I | GGNCC | 4 cut(s) | 168, 204, 216, 231 |
| CseI | GACGC | 2 cut(s) | 79, 139 |
| Csp6I | GTAC | 2 cut(s) | 6, 467 |
| CspAI | ACCGGT | 1 cut(s) | 82 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 290, 325 |
| CviAII | CATG | 3 cut(s) | 16, 228, 902 |
| CviQI | GTAC | 2 cut(s) | 6, 467 |
| DdeI | CTNAG | 3 cut(s) | 321, 487, 543 |
| DpnI | GATC | 5 cut(s) | 257, 368, 567, 822, 922 |
| DpnII | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| DraI | TTTAAA | 1 cut(s) | 882 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 434 |
| DriI | GACNNNNNGTC | 1 cut(s) | 588 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 434 |
| EaeI | YGGCCR | 4 cut(s) | 249, 396, 832, 848 |
| EagI | CGGCCG | 1 cut(s) | 832 |
| Eam1104I | CTCTTC | 1 cut(s) | 55 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 588 |
| EarI | CTCTTC | 1 cut(s) | 55 |
| EciI | GGCGGA | 2 cut(s) | 351, 547 |
| Ecl136II | GAGCTC | 1 cut(s) | 733 |
| EclXI | CGGCCG | 1 cut(s) | 832 |
| Eco130I | CCWWGG | 2 cut(s) | 227, 901 |
| Eco24I | GRGCYC | 1 cut(s) | 735 |
| Eco31I | GGTCTC | 1 cut(s) | 538 |
| Eco47I | GGWCC | 1 cut(s) | 216 |
| Eco52I | CGGCCG | 1 cut(s) | 832 |
| Eco53kI | GAGCTC | 1 cut(s) | 733 |
| EcoICRI | GAGCTC | 1 cut(s) | 733 |
| EcoO109I | RGGNCCY | 2 cut(s) | 204, 216 |
| EcoRII | CCWGG | 4 cut(s) | 141, 405, 735, 779 |
| EcoT14I | CCWWGG | 2 cut(s) | 227, 901 |
| EcoT22I | ATGCAT | 1 cut(s) | 513 |
| EcoT38I | GRGCYC | 1 cut(s) | 735 |
| ErhI | CCWWGG | 2 cut(s) | 227, 901 |
| FaeI | CATG | 3 cut(s) | 19, 231, 905 |
| FaqI | GGGAC | 3 cut(s) | 205, 229, 584 |
| FatI | CATG | 3 cut(s) | 15, 227, 901 |
| FauI | CCCGC | 2 cut(s) | 452, 782 |
| FauNDI | CATATG | 1 cut(s) | 579 |
| FbaI | TGATCA | 1 cut(s) | 820 |
| FblI | GTMKAC | 1 cut(s) | 679 |
| Fnu4HI | GCNGC | 4 cut(s) | 334, 357, 766, 843 |
| FokI | GGATG | 2 cut(s) | 86, 102 |
| FriOI | GRGCYC | 1 cut(s) | 735 |
| Fsp4HI | GCNGC | 4 cut(s) | 334, 357, 766, 843 |
| GluI | GCNGC | 4 cut(s) | 334, 357, 766, 843 |
| GsuI | CTGGAG | 2 cut(s) | 719, 735 |
| HapII | CCGG | 7 cut(s) | 83, 119, 188, 285, 360, 399, 774 |
| HgaI | GACGC | 2 cut(s) | 79, 139 |
| Hin1I | GRCGYC | 1 cut(s) | 90 |
| Hin1II | CATG | 3 cut(s) | 19, 231, 905 |
| HincII | GTYRAC | 1 cut(s) | 13 |
| HindII | GTYRAC | 1 cut(s) | 13 |
| HinfI | GANTC | 5 cut(s) | 39, 196, 525, 740, 869 |
| HpaII | CCGG | 7 cut(s) | 83, 119, 188, 285, 360, 399, 774 |
| HphI | GGTGA | 2 cut(s) | 383, 718 |
| Hpy166II | GTNNAC | 3 cut(s) | 13, 549, 680 |
| Hpy188I | TCNGA | 4 cut(s) | 440, 524, 607, 660 |
| Hpy188III | TCNNGA | 1 cut(s) | 690 |
| Hpy8I | GTNNAC | 3 cut(s) | 13, 549, 680 |
| Hpy99I | CGWCG | 3 cut(s) | 128, 244, 440 |
| HpyAV | CCTTC | 1 cut(s) | 407 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 621 |
| HpyCH4V | TGCA | 6 cut(s) | 133, 182, 307, 506, 511, 642 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 353 |
| HpyF3I | CTNAG | 3 cut(s) | 321, 487, 543 |
| Hsp92I | GRCGYC | 1 cut(s) | 90 |
| Hsp92II | CATG | 3 cut(s) | 19, 231, 905 |
| Ksp22I | TGATCA | 1 cut(s) | 820 |
| Kzo9I | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| LmnI | GCTCC | 4 cut(s) | 338, 431, 451, 738 |
| Lsp1109I | GCAGC | 1 cut(s) | 752 |
| MaeIII | GTNAC | 2 cut(s) | 382, 724 |
| MalI | GATC | 5 cut(s) | 257, 368, 567, 822, 922 |
| MboI | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| MboII | GAAGA | 6 cut(s) | 42, 85, 309, 422, 582, 798 |
| MfeI | CAATTG | 1 cut(s) | 816 |
| MflI | RGATCY | 1 cut(s) | 920 |
| MhlI | GDGCHC | 1 cut(s) | 735 |
| MlsI | TGGCCA | 1 cut(s) | 251 |
| MluCI | AATT | 3 cut(s) | 816, 858, 864 |
| MluNI | TGGCCA | 1 cut(s) | 251 |
| MlyI | GAGTC | 3 cut(s) | 190, 534, 749 |
| MmeI | TCCRAC | 1 cut(s) | 418 |
| Mox20I | TGGCCA | 1 cut(s) | 251 |
| Mph1103I | ATGCAT | 1 cut(s) | 513 |
| MroXI | GAANNNNTTC | 1 cut(s) | 665 |
| MscI | TGGCCA | 1 cut(s) | 251 |
| MseI | TTAA | 3 cut(s) | 57, 707, 881 |
| Msp20I | TGGCCA | 1 cut(s) | 251 |
| MspI | CCGG | 7 cut(s) | 83, 119, 188, 285, 360, 399, 774 |
| MspR9I | CCNGG | 6 cut(s) | 143, 189, 286, 407, 737, 781 |
| MunI | CAATTG | 1 cut(s) | 816 |
| MvaI | CCWGG | 4 cut(s) | 143, 407, 737, 781 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 353 |
| NciI | CCSGG | 2 cut(s) | 189, 286 |
| NcoI | CCATGG | 2 cut(s) | 227, 901 |
| NdeI | CATATG | 1 cut(s) | 579 |
| NdeII | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| NlaIII | CATG | 3 cut(s) | 19, 231, 905 |
| NlaIV | GGNNCC | 5 cut(s) | 140, 217, 340, 433, 778 |
| NmeAIII | GCCGAG | 2 cut(s) | 724, 826 |
| NmuCI | GTSAC | 1 cut(s) | 724 |
| NsiI | ATGCAT | 1 cut(s) | 513 |
| NspV | TTCGAA | 1 cut(s) | 42 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 93 |
| PdmI | GAANNNNTTC | 1 cut(s) | 665 |
| PfeI | GAWTC | 2 cut(s) | 39, 869 |
| PflFI | GACNNNGTC | 1 cut(s) | 696 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 758 |
| PfoI | TCCNGGA | 1 cut(s) | 735 |
| PinAI | ACCGGT | 1 cut(s) | 82 |
| PkrI | GCNGC | 4 cut(s) | 335, 358, 767, 844 |
| PleI | GAGTC | 3 cut(s) | 190, 533, 748 |
| PpsI | GAGTC | 3 cut(s) | 190, 533, 748 |
| PpuMI | RGGWCCY | 1 cut(s) | 216 |
| Psp124BI | GAGCTC | 1 cut(s) | 735 |
| Psp5II | RGGWCCY | 1 cut(s) | 216 |
| Psp6I | CCWGG | 4 cut(s) | 141, 405, 735, 779 |
| PspGI | CCWGG | 4 cut(s) | 141, 405, 735, 779 |
| PspN4I | GGNNCC | 5 cut(s) | 140, 217, 340, 433, 778 |
| PspPI | GGNCC | 4 cut(s) | 168, 204, 216, 231 |
| PspPPI | RGGWCCY | 1 cut(s) | 216 |
| PstI | CTGCAG | 1 cut(s) | 309 |
| PstNI | CAGNNNCTG | 1 cut(s) | 758 |
| PsuI | RGATCY | 1 cut(s) | 920 |
| PsyI | GACNNNGTC | 1 cut(s) | 696 |
| RsaI | GTAC | 2 cut(s) | 7, 468 |
| RsaNI | GTAC | 2 cut(s) | 6, 467 |
| SacI | GAGCTC | 1 cut(s) | 735 |
| SaqAI | TTAA | 3 cut(s) | 57, 707, 881 |
| SatI | GCNGC | 4 cut(s) | 334, 357, 766, 843 |
| Sau3AI | GATC | 5 cut(s) | 255, 366, 565, 820, 920 |
| Sau96I | GGNCC | 4 cut(s) | 168, 204, 216, 231 |
| SchI | GAGTC | 3 cut(s) | 190, 534, 749 |
| ScrFI | CCNGG | 6 cut(s) | 143, 189, 286, 407, 737, 781 |
| SduI | GDGCHC | 1 cut(s) | 735 |
| SetI | ASST | 8 cut(s) | 67, 221, 384, 418, 456, 685, 735, 910 |
| SfcI | CTRYAG | 2 cut(s) | 66, 305 |
| SfuI | TTCGAA | 1 cut(s) | 42 |
| SinI | GGWCC | 1 cut(s) | 216 |
| Sse9I | AATT | 3 cut(s) | 816, 858, 864 |
| SsiI | CCGC | 9 cut(s) | 103, 333, 336, 357, 377, 459, 558, 789, 842 |
| SstI | GAGCTC | 1 cut(s) | 735 |
| StyD4I | CCNGG | 6 cut(s) | 141, 187, 284, 405, 735, 779 |
| StyI | CCWWGG | 2 cut(s) | 227, 901 |
| TaaI | ACNGT | 2 cut(s) | 10, 621 |
| TaqI | TCGA | 5 cut(s) | 42, 96, 126, 242, 568 |
| TaqII | GACCGA | 1 cut(s) | 520 |
| TasI | AATT | 3 cut(s) | 816, 858, 864 |
| TauI | GCSGC | 3 cut(s) | 336, 359, 845 |
| TfiI | GAWTC | 2 cut(s) | 39, 869 |
| Tru1I | TTAA | 3 cut(s) | 57, 707, 881 |
| Tru9I | TTAA | 3 cut(s) | 57, 707, 881 |
| TscAI | CASTG | 3 cut(s) | 31, 189, 314 |
| TseFI | GTSAC | 1 cut(s) | 724 |
| TseI | GCWGC | 1 cut(s) | 765 |
| Tsp45I | GTSAC | 1 cut(s) | 724 |
| TspGWI | ACGGA | 3 cut(s) | 267, 444, 712 |
| TspRI | CASTG | 3 cut(s) | 31, 189, 314 |
| Tth111I | GACNNNGTC | 1 cut(s) | 696 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 758 |
| VpaK11BI | GGWCC | 1 cut(s) | 216 |
| XmiI | GTMKAC | 1 cut(s) | 679 |
| XmnI | GAANNNNTTC | 1 cut(s) | 665 |
| Zsp2I | ATGCAT | 1 cut(s) | 513 |