Rh7DG275300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
29624954 .. 29625797
844 bp
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UTR
Exon/CDS
Intron
Rh7DG275300.1

Sequence Viewer

Length: 360 bp
ATGCAGCAAGGCGATGCAAATGAAGAAGGTTCTCAAAATGTTCAGCAAGATGGCAATGCAAATGATGAACATAGAATGCAGAATGCTCAGCAATGTGGCAATTCTAATGGACATAGTTCTGAAAATGTTCACGATGTGGAGCATTATGAGATTCCATCTCAACAATCACTTGCGAAAGCACCTTTTGTTTCATCGCAACCACTTCCATCACCTCTAAATTTCTCACAAGAAATTCCTCCAGTTCAAAGAAGTTCTCAACCTATTGGATCATTCTTAGCTTCCTTCTCCTCCATCATGAACACTAATCCTGTAACATGTAACAGGGAGGCCAAAGAAGCAAGTTGCATTCAGAAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

119

Amino Acids

12.96

Weight (kDa)

4.83

Isoelectric Point (pI)

64.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 274
AcsI RAATTY 2 cut(s) 217, 231
AdeI CACNNNGTG 1 cut(s) 136
AflIII ACRYGT 1 cut(s) 314
AgsI TTSAA 1 cut(s) 245
AluBI AGCT 1 cut(s) 278
AluI AGCT 1 cut(s) 278
AlwI GGATC 1 cut(s) 274
AoxI GGCC 1 cut(s) 327
ApeKI GCWGC 1 cut(s) 4
ApoI RAATTY 2 cut(s) 217, 231
Asp700I GAANNNNTTC 1 cut(s) 126
AsuHPI GGTGA 1 cut(s) 201
BbvI GCAGC 1 cut(s) 16
BccI CCATC 4 cut(s) 44, 163, 214, 299
BisI GCNGC 1 cut(s) 5
BlpI GCTNAGC 1 cut(s) 87
BlsI GCNGC 1 cut(s) 6
BmsI GCATC 1 cut(s) 4
BpmI CTGGAG 1 cut(s) 222
Bpu1102I GCTNAGC 1 cut(s) 87
Bse1I ACTGG 1 cut(s) 239
Bse3DI GCAATG 2 cut(s) 61, 98
BseMI GCAATG 2 cut(s) 61, 98
BseMII CTCAG 1 cut(s) 101
BseNI ACTGG 1 cut(s) 239
BseRI GAGGAG 1 cut(s) 277
BseXI GCAGC 1 cut(s) 16
BshFI GGCC 1 cut(s) 329
BsmI GAATGC 3 cut(s) 81, 88, 345
BsnI GGCC 1 cut(s) 329
Bsp143I GATC 1 cut(s) 266
Bsp1720I GCTNAGC 1 cut(s) 87
BspANI GGCC 1 cut(s) 329
BspCNI CTCAG 1 cut(s) 100
BspHI TCATGA 1 cut(s) 294
BspPI GGATC 1 cut(s) 274
BsrDI GCAATG 2 cut(s) 61, 98
BsrI ACTGG 1 cut(s) 239
BssMI GATC 1 cut(s) 266
BstDEI CTNAG 2 cut(s) 87, 274
BstKTI GATC 1 cut(s) 269
BstMBI GATC 1 cut(s) 266
BstMWI GCNNNNNNNGC 1 cut(s) 335
BstNSI RCATGY 1 cut(s) 318
BstV1I GCAGC 1 cut(s) 16
BsuRI GGCC 1 cut(s) 329
BtgZI GCGATG 2 cut(s) 27, 177
CciI TCATGA 1 cut(s) 294
CviAII CATG 2 cut(s) 295, 315
CviJI RGCY 2 cut(s) 278, 329
CviKI_1 RGCY 2 cut(s) 278, 329
DdeI CTNAG 2 cut(s) 87, 274
DpnI GATC 1 cut(s) 268
DpnII GATC 1 cut(s) 266
DraIII CACNNNGTG 1 cut(s) 136
FaeI CATG 2 cut(s) 298, 318
FaiI YATR 5 cut(s) 72, 114, 147, 296, 316
FatI CATG 2 cut(s) 294, 314
Fnu4HI GCNGC 1 cut(s) 5
Fsp4HI GCNGC 1 cut(s) 5
GluI GCNGC 1 cut(s) 5
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 1 cut(s) 329
Hin1II CATG 2 cut(s) 298, 318
HinfI GANTC 1 cut(s) 151
HphI GGTGA 1 cut(s) 201
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 2 cut(s) 121, 351
Hpy188III TCNNGA 2 cut(s) 131, 295
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 2 cut(s) 20, 292
HpyCH4V TGCA 5 cut(s) 4, 17, 59, 79, 345
HpyF10VI GCNNNNNNNGC 1 cut(s) 335
HpyF3I CTNAG 2 cut(s) 87, 274
Hsp92II CATG 2 cut(s) 298, 318
Kzo9I GATC 1 cut(s) 266
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 3 cut(s) 252, 307, 321
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 1 cut(s) 4
MaeIII GTNAC 2 cut(s) 310, 317
MalI GATC 1 cut(s) 268
MboI GATC 1 cut(s) 266
MboII GAAGA 1 cut(s) 35
MluCI AATT 3 cut(s) 100, 217, 231
MnlI CCTC 4 cut(s) 222, 246, 298, 319
MroXI GAANNNNTTC 1 cut(s) 126
Mva1269I GAATGC 3 cut(s) 81, 88, 345
MwoI GCNNNNNNNGC 1 cut(s) 335
NdeII GATC 1 cut(s) 266
NlaIII CATG 2 cut(s) 298, 318
NspI RCATGY 1 cut(s) 318
PagI TCATGA 1 cut(s) 294
PciI ACATGT 1 cut(s) 314
PctI GAATGC 3 cut(s) 81, 88, 345
PdmI GAANNNNTTC 1 cut(s) 126
PfeI GAWTC 1 cut(s) 151
PkrI GCNGC 1 cut(s) 6
PscI ACATGT 1 cut(s) 314
SatI GCNGC 1 cut(s) 5
Sau3AI GATC 1 cut(s) 266
SetI ASST 5 cut(s) 31, 184, 214, 262, 280
SfaNI GCATC 1 cut(s) 4
Sse9I AATT 3 cut(s) 100, 217, 231
TasI AATT 3 cut(s) 100, 217, 231
TfiI GAWTC 1 cut(s) 151
TseI GCWGC 1 cut(s) 4
TspDTI ATGAA 4 cut(s) 36, 81, 180, 311
XapI RAATTY 2 cut(s) 217, 231
XceI RCATGY 1 cut(s) 318
XmnI GAANNNNTTC 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.