AT1G67160

F-box protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25124819 .. 25127098
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G67160.1

Sequence Viewer

Length: 1353 bp
ATGAGCGATTCCGACGGAAAAAATATGGAAGGACGATTCGAAGCGGCCTATATCGTGGACCTAGTTAGATTAATCTTGGAGCGCTTGAGCTTCGTTGATTTTCATCGAGCGAGATGCGTTTCTTCAACATGGTATGTTGCTTCGAAATCAGTCATCGGAGTAACAAATCCAACAACTCCATGGATCATTCTTTTTCCAAACAAAAATGTCGAAAACAACGGTTCATGTAAGTTGTTTGATCCTCATGAAAACAAAACCTACATAATCAGAGATTTAGGGTTTGATATGTCTACGAGTCGTTGTTTAGCGAGTTCCGGTAGTTGGTTCCTTATGTTCGACCATAGAGCTGATTTTCATCTTTTGAATCTTTTTACTCGAGAGAGGATTCTTCTTCCGTCTCTCGAATCAATCGATGGAGAACGGTATATGCGATTCAAGAGACCCATTAGCGGTAGCCATATAGAAATAGACAAAGCGGTTCTGTGGGTAGATGACAAAAGCAGAGATTACTTTGTGTTTTGTAATCTTTCTAGTTATGTAGCATATCATCACAAGAGAGGAGATGACAACAATAGCTGGAAAGTTCTTCAACCAATAAAGCATCAAGGCTGTGTTGATATGGTGTTTAAAGAAAGCAAGCTTTACATGATTAGTGCACATCAATGTCTCACTGTTTTTGATTTCTCCGGTGGTGTTTCTCCAGTAGAAATGGAATGTGCAAGTTTCGGATCGTCTGTGTGTGTAAATAGATTTCATATGAAGTATTTCAGCAATCTTGCTGTGACTTTGTCTGGAGAAGTTTTGATCATTGTAGGTGGTAAAATGGATAGTTCTCCAGAGGCTAAATGCGTCTTCACTGTCAATAAGATGGATCCAAAATCATCAGAATTTACAGTACTAATCAAGTCTATAGGGGACGAGGCATTGCTTTTGGATTTAGGAATTACGGTTCCGGCCAAAGATGGAGTTATGAGAGATTGCATATATTTTAGTAATGATCAGTATCATAGATGTTGTGGGATTAGTCTACGCGATGGTTATAACGCTGACCGTATTTGCGTTTACCAAATCGGAAGCGATTATGTGGTCCAAGAGTTTGAACATCTAACTACTTCCTCGACAAAACTTTTCAAGGATGCTCGTTGGTTTTTCCCCACTTTTGGTGATAAATGTTGTTTCCATCTATGGATTCTTCATCCAGTAATTCTGCAGGCGAAGAAGCTTCAGAAAAGCAATTTAAAAGGGACAAAACCAGTGACGAGAGAGAAAACGACAATAGTTAATAACGTAGATGGAACAACAACGCAGCGAGAGAAAACAACCAAAGGAAAGAACATGATTGGAAAGAAGTGA

Protein Analysis

450

Amino Acids

51.24

Weight (kDa)

8.5

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 78 - 355 3.8e-45 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1041
AccI GTMKAC 2 cut(s) 290, 1027
AccII CGCG 1 cut(s) 1032
AciI CCGC 3 cut(s) 44, 450, 476
AclWI GGATC 5 cut(s) 191, 233, 736, 866, 879
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 1 cut(s) 887
AcuI CTGAAG 1 cut(s) 1208
AfaI GTAC 1 cut(s) 897
AfeI AGCGCT 1 cut(s) 83
AfiI CCNNNNNNNGG 3 cut(s) 321, 449, 1160
AgsI TTSAA 6 cut(s) 126, 364, 436, 590, 1100, 1132
AloI GAACNNNNNNTCC 2 cut(s) 933, 965
AluBI AGCT 5 cut(s) 90, 347, 576, 640, 1222
AluI AGCT 5 cut(s) 90, 347, 576, 640, 1222
Alw21I GWGCWC 1 cut(s) 658
Alw26I GTCTC 3 cut(s) 402, 433, 671
Alw44I GTGCAC 1 cut(s) 654
AlwI GGATC 5 cut(s) 191, 233, 736, 866, 879
Ama87I CYCGRG 1 cut(s) 375
Aor51HI AGCGCT 1 cut(s) 83
AoxI GGCC 2 cut(s) 45, 954
ApaLI GTGCAC 1 cut(s) 654
ApeKI GCWGC 1 cut(s) 1306
ApoI RAATTY 1 cut(s) 887
AseI ATTAAT 1 cut(s) 71
Asp700I GAANNNNTTC 1 cut(s) 764
AspLEI GCGC 1 cut(s) 84
AspS9I GGNCC 2 cut(s) 58, 1087
AsuHPI GGTGA 1 cut(s) 1175
AsuII TTCGAA 2 cut(s) 39, 143
AvaI CYCGRG 1 cut(s) 375
AvaII GGWCC 2 cut(s) 58, 1087
BaeGI GKGCMC 1 cut(s) 658
BamHI GGATCC 1 cut(s) 871
BbsI GAAGAC 1 cut(s) 844
Bbv12I GWGCWC 1 cut(s) 658
BbvI GCAGC 1 cut(s) 1318
BccI CCATC 6 cut(s) 407, 862, 956, 1028, 1188, 1286
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BclI TGATCA 2 cut(s) 804, 997
BcoDI GTCTC 3 cut(s) 402, 433, 671
BfaI CTAG 2 cut(s) 62, 531
BfmI CTRYAG 2 cut(s) 909, 1208
BfoI RGCGCY 1 cut(s) 85
BisI GCNGC 2 cut(s) 45, 1307
BlsI GCNGC 2 cut(s) 46, 1308
BmcAI AGTACT 1 cut(s) 897
Bme18I GGWCC 2 cut(s) 58, 1087
BmeT110I CYCGRG 1 cut(s) 375
BmgT120I GGNCC 2 cut(s) 58, 1087
BmiI GGNNCC 3 cut(s) 326, 873, 951
BmsI GCATC 3 cut(s) 104, 610, 1126
BpiI GAAGAC 1 cut(s) 844
BpmI CTGGAG 3 cut(s) 684, 813, 819
Bpu14I TTCGAA 2 cut(s) 39, 143
BpuEI CTTGAG 1 cut(s) 106
Bsa29I ATCGAT 1 cut(s) 411
BsaBI GATNNNNATC 3 cut(s) 102, 354, 1002
BsaI GGTCTC 1 cut(s) 433
BsaJI CCNNGG 1 cut(s) 179
BsaWI WCCGGW 2 cut(s) 314, 686
Bsc4I CCNNNNNNNGG 3 cut(s) 321, 449, 1160
Bse1I ACTGG 3 cut(s) 701, 1199, 1253
Bse3DI GCAATG 1 cut(s) 923
Bse8I GATNNNNATC 3 cut(s) 102, 354, 1002
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 1 cut(s) 179
BseGI GGATG 2 cut(s) 1141, 1195
BseJI GATNNNNATC 3 cut(s) 102, 354, 1002
BseLI CCNNNNNNNGG 3 cut(s) 321, 449, 1160
BseMI GCAATG 1 cut(s) 923
BseNI ACTGG 3 cut(s) 701, 1199, 1253
BseRI GAGGAG 1 cut(s) 573
BseSI GKGCMC 1 cut(s) 658
BseXI GCAGC 1 cut(s) 1318
Bsh1236I CGCG 1 cut(s) 1032
BshFI GGCC 2 cut(s) 47, 956
BshVI ATCGAT 1 cut(s) 411
BsiHKAI GWGCWC 1 cut(s) 658
BsiHKCI CYCGRG 1 cut(s) 375
BsiSI CCGG 3 cut(s) 315, 687, 953
BslFI GGGAC 2 cut(s) 929, 1258
BslI CCNNNNNNNGG 3 cut(s) 321, 449, 1160
BsmAI GTCTC 3 cut(s) 402, 433, 671
BsmBI CGTCTC 1 cut(s) 402
BsmFI GGGAC 2 cut(s) 929, 1258
BsnI GGCC 2 cut(s) 47, 956
Bso31I GGTCTC 1 cut(s) 433
BsoBI CYCGRG 1 cut(s) 375
Bsp119I TTCGAA 2 cut(s) 39, 143
Bsp1286I GDGCHC 1 cut(s) 658
Bsp143I GATC 6 cut(s) 183, 238, 728, 804, 871, 997
Bsp19I CCATGG 1 cut(s) 179
BspACI CCGC 3 cut(s) 44, 450, 476
BspANI GGCC 2 cut(s) 47, 956
BspDI ATCGAT 1 cut(s) 411
BspFNI CGCG 1 cut(s) 1032
BspHI TCATGA 1 cut(s) 244
BspLI GGNNCC 3 cut(s) 326, 873, 951
BspMAI CTGCAG 1 cut(s) 1212
BspPI GGATC 5 cut(s) 191, 233, 736, 866, 879
BspT104I TTCGAA 2 cut(s) 39, 143
BspTNI GGTCTC 1 cut(s) 433
BsrDI GCAATG 1 cut(s) 923
BsrI ACTGG 3 cut(s) 701, 1199, 1253
BssECI CCNNGG 1 cut(s) 179
BssMI GATC 6 cut(s) 183, 238, 728, 804, 871, 997
BssT1I CCWWGG 1 cut(s) 179
Bst4CI ACNGT 7 cut(s) 221, 423, 673, 859, 895, 949, 1052
BstBI TTCGAA 2 cut(s) 39, 143
BstC8I GCNNGC 2 cut(s) 638, 1212
BstDSI CCRYGG 1 cut(s) 179
BstF5I GGATG 2 cut(s) 1141, 1195
BstFNI CGCG 1 cut(s) 1032
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 1 cut(s) 84
BstKTI GATC 6 cut(s) 186, 241, 731, 807, 874, 1000
BstMAI GTCTC 3 cut(s) 402, 433, 671
BstMBI GATC 6 cut(s) 183, 238, 728, 804, 871, 997
BstSFI CTRYAG 2 cut(s) 909, 1208
BstSLI GKGCMC 1 cut(s) 658
BstUI CGCG 1 cut(s) 1032
BstV1I GCAGC 1 cut(s) 1318
BstV2I GAAGAC 1 cut(s) 844
BstX2I RGATCY 1 cut(s) 871
BstYI RGATCY 1 cut(s) 871
Bsu15I ATCGAT 1 cut(s) 411
BsuRI GGCC 2 cut(s) 47, 956
BsuTUI ATCGAT 1 cut(s) 411
BtgI CCRYGG 1 cut(s) 179
BtgZI GCGATG 1 cut(s) 1047
BtsCI GGATG 2 cut(s) 1141, 1195
BtsIMutI CAGTG 3 cut(s) 669, 855, 1260
Cac8I GCNNGC 2 cut(s) 638, 1212
CciI TCATGA 1 cut(s) 244
CfoI GCGC 1 cut(s) 84
Cfr13I GGNCC 2 cut(s) 58, 1087
ClaI ATCGAT 1 cut(s) 411
CseI GACGC 1 cut(s) 838
Csp6I GTAC 1 cut(s) 896
CviAII CATG 6 cut(s) 129, 180, 225, 245, 646, 1336
CviQI GTAC 1 cut(s) 896
DpnI GATC 6 cut(s) 185, 240, 730, 806, 873, 999
DpnII GATC 6 cut(s) 183, 238, 728, 804, 871, 997
DraI TTTAAA 2 cut(s) 628, 1239
EaeI YGGCCR 1 cut(s) 954
Eco130I CCWWGG 1 cut(s) 179
Eco31I GGTCTC 1 cut(s) 433
Eco47I GGWCC 2 cut(s) 58, 1087
Eco47III AGCGCT 1 cut(s) 83
Eco57I CTGAAG 1 cut(s) 1208
Eco88I CYCGRG 1 cut(s) 375
EcoT14I CCWWGG 1 cut(s) 179
ErhI CCWWGG 1 cut(s) 179
Esp3I CGTCTC 1 cut(s) 402
FaeI CATG 6 cut(s) 132, 183, 228, 248, 649, 1339
FaqI GGGAC 2 cut(s) 929, 1258
FatI CATG 6 cut(s) 128, 179, 224, 244, 645, 1335
FauNDI CATATG 1 cut(s) 756
FbaI TGATCA 2 cut(s) 804, 997
FblI GTMKAC 2 cut(s) 290, 1027
Fnu4HI GCNGC 2 cut(s) 45, 1307
FokI GGATG 2 cut(s) 1148, 1182
Fsp4HI GCNGC 2 cut(s) 45, 1307
FspBI CTAG 2 cut(s) 62, 531
GlaI GCGC 1 cut(s) 83
GluI GCNGC 2 cut(s) 45, 1307
GsuI CTGGAG 3 cut(s) 684, 813, 819
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 2 cut(s) 47, 956
HapII CCGG 3 cut(s) 315, 687, 953
HgaI GACGC 1 cut(s) 838
HhaI GCGC 1 cut(s) 84
Hin1II CATG 6 cut(s) 132, 183, 228, 248, 649, 1339
Hin6I GCGC 1 cut(s) 82
HinP1I GCGC 1 cut(s) 82
HindIII AAGCTT 2 cut(s) 638, 1220
HinfI GANTC 8 cut(s) 8, 36, 295, 364, 385, 404, 432, 1189
HpaII CCGG 3 cut(s) 315, 687, 953
HphI GGTGA 1 cut(s) 1175
Hpy166II GTNNAC 5 cut(s) 58, 291, 656, 1028, 1063
Hpy188I TCNGA 7 cut(s) 13, 158, 269, 728, 886, 1073, 1227
Hpy188III TCNNGA 6 cut(s) 245, 377, 401, 436, 792, 836
Hpy8I GTNNAC 5 cut(s) 58, 291, 656, 1028, 1063
Hpy99I CGWCG 1 cut(s) 17
HpyAV CCTTC 1 cut(s) 23
HpyCH4III ACNGT 7 cut(s) 221, 423, 673, 859, 895, 949, 1052
HpyCH4IV ACGT 1 cut(s) 1287
HpyCH4V TGCA 4 cut(s) 656, 719, 981, 1210
HpySE526I ACGT 1 cut(s) 1287
Hsp92II CATG 6 cut(s) 132, 183, 228, 248, 649, 1339
HspAI GCGC 1 cut(s) 82
Ksp22I TGATCA 2 cut(s) 804, 997
Kzo9I GATC 6 cut(s) 183, 238, 728, 804, 871, 997
LmnI GCTCC 1 cut(s) 79
Lsp1109I GCAGC 1 cut(s) 1318
LweI GCATC 3 cut(s) 104, 610, 1126
MaeI CTAG 2 cut(s) 62, 531
MaeII ACGT 1 cut(s) 1287
MaeIII GTNAC 3 cut(s) 160, 781, 1255
MalI GATC 6 cut(s) 185, 240, 730, 806, 873, 999
MboI GATC 6 cut(s) 183, 238, 728, 804, 871, 997
MboII GAAGA 7 cut(s) 114, 380, 383, 578, 844, 1184, 1228
MflI RGATCY 1 cut(s) 871
MhlI GDGCHC 1 cut(s) 658
MluCI AATT 4 cut(s) 887, 942, 1203, 1234
MlyI GAGTC 1 cut(s) 304
MmeI TCCRAC 2 cut(s) 36, 194
MnlI CCTC 6 cut(s) 252, 375, 551, 832, 913, 1126
MroXI GAANNNNTTC 1 cut(s) 764
MseI TTAA 4 cut(s) 71, 627, 1238, 1281
MslI CAYNNNNRTG 1 cut(s) 661
MspI CCGG 3 cut(s) 315, 687, 953
MvnI CGCG 1 cut(s) 1032
NcoI CCATGG 1 cut(s) 179
NdeI CATATG 1 cut(s) 756
NdeII GATC 6 cut(s) 183, 238, 728, 804, 871, 997
NlaIII CATG 6 cut(s) 132, 183, 228, 248, 649, 1339
NlaIV GGNNCC 3 cut(s) 326, 873, 951
NmuCI GTSAC 2 cut(s) 781, 1255
NspV TTCGAA 2 cut(s) 39, 143
PaeR7I CTCGAG 1 cut(s) 375
PagI TCATGA 1 cut(s) 244
PcsI WCGNNNNNNNCGW 2 cut(s) 408, 427
PdmI GAANNNNTTC 1 cut(s) 764
PfeI GAWTC 7 cut(s) 8, 36, 364, 385, 404, 432, 1189
PflFI GACNNNGTC 1 cut(s) 787
PkrI GCNGC 2 cut(s) 46, 1308
PleI GAGTC 1 cut(s) 303
PpsI GAGTC 1 cut(s) 303
PshBI ATTAAT 1 cut(s) 71
PsiI TTATAA 1 cut(s) 1041
PspN4I GGNNCC 3 cut(s) 326, 873, 951
PspPI GGNCC 2 cut(s) 58, 1087
PstI CTGCAG 1 cut(s) 1212
PsuI RGATCY 1 cut(s) 871
PsyI GACNNNGTC 1 cut(s) 787
RsaI GTAC 1 cut(s) 897
RsaNI GTAC 1 cut(s) 896
RseI CAYNNNNRTG 1 cut(s) 661
SaqAI TTAA 4 cut(s) 71, 627, 1238, 1281
SatI GCNGC 2 cut(s) 45, 1307
Sau3AI GATC 6 cut(s) 183, 238, 728, 804, 871, 997
Sau96I GGNCC 2 cut(s) 58, 1087
ScaI AGTACT 1 cut(s) 897
SchI GAGTC 1 cut(s) 304
SduI GDGCHC 1 cut(s) 658
SetI ASST 9 cut(s) 63, 92, 260, 349, 578, 642, 817, 1224, 1290
SfaNI GCATC 3 cut(s) 104, 610, 1126
SfcI CTRYAG 2 cut(s) 909, 1208
Sfr274I CTCGAG 1 cut(s) 375
SfuI TTCGAA 2 cut(s) 39, 143
SinI GGWCC 2 cut(s) 58, 1087
SlaI CTCGAG 1 cut(s) 375
SmiMI CAYNNNNRTG 1 cut(s) 661
SmlI CTYRAG 2 cut(s) 85, 375
SmoI CTYRAG 2 cut(s) 85, 375
Sse9I AATT 4 cut(s) 887, 942, 1203, 1234
SsiI CCGC 3 cut(s) 44, 450, 476
SspMI CTAG 2 cut(s) 62, 531
StyI CCWWGG 1 cut(s) 179
TaaI ACNGT 7 cut(s) 221, 423, 673, 859, 895, 949, 1052
TaiI ACGT 1 cut(s) 1290
TaqI TCGA 9 cut(s) 39, 106, 143, 210, 336, 376, 402, 411, 1118
TasI AATT 4 cut(s) 887, 942, 1203, 1234
TatI WGTACW 1 cut(s) 895
TauI GCSGC 1 cut(s) 47
TfiI GAWTC 7 cut(s) 8, 36, 364, 385, 404, 432, 1189
Tru1I TTAA 4 cut(s) 71, 627, 1238, 1281
Tru9I TTAA 4 cut(s) 71, 627, 1238, 1281
TscAI CASTG 3 cut(s) 676, 862, 1260
TseFI GTSAC 2 cut(s) 781, 1255
TseI GCWGC 1 cut(s) 1306
Tsp45I GTSAC 2 cut(s) 781, 1255
TspDTI ATGAA 7 cut(s) 92, 213, 261, 344, 743, 773, 1184
TspGWI ACGGA 2 cut(s) 30, 384
TspRI CASTG 3 cut(s) 676, 862, 1260
Tth111I GACNNNGTC 1 cut(s) 787
VneI GTGCAC 1 cut(s) 654
VpaK11BI GGWCC 2 cut(s) 58, 1087
VspI ATTAAT 1 cut(s) 71
XapI RAATTY 1 cut(s) 887
XcmI CCANNNNNNNNNTGG 1 cut(s) 177
XhoI CTCGAG 1 cut(s) 375
XmiI GTMKAC 2 cut(s) 290, 1027
XmnI GAANNNNTTC 1 cut(s) 764
XspI CTAG 2 cut(s) 62, 531
ZrmI AGTACT 1 cut(s) 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.