Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000658

Physical Location & Seq

Genomic Coordinates Reverse (-)

1664214 .. 1665632

Gene Structure 1419 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG027600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGGATGTGGCCACTCGCTTCTCTCTGTATGTTCCCCAGTGATTGACGACGTGAACAAAGAAAGAAAGAGACAAACAACGTTGAAGGTCGACCTTACAGAAGAGAGAAGAATAAGAAGGATTGAAGATGATGTCGACGGAGCTCGTAAAGTGCACGCAGCCATGAAGCGCCTCATGTTCGCCGTCGACGGTGGTAGTAGGCCTGAAGACCTAACAAGCTTGACCGATGGCATACCTGAGGTCGAGATCAACCAGGCCAAGTGCGTTGAGTATTTGAACAGGATACACGACCAAGTTGTTGAGCTAAAACAAAATAGTATCAAAAAGAGAAAAGCAAAGTGGTCTGAGCTTCCTACTGACCTTCTAGAGTCCATCTTGAAAAAACTTATACCTTCTGAATTTGACATCCTTGGCTTTAGAGATATTCTATATTTTAAAGCCGTCTGTCATTCCTGGAGAACCGCTGCAAAATCTTGTAGCTCTTACGTTCCATTGCCTCGAACTCCATGTCTCTTACTTCATAACTACCCATCCTTCCTCTTTGATCCCATTGGAAAAAAGATGCACAAAATCAGGAACGTCTATGACAATGGCAATGTTTTTTGTGATCACCTTCTTTCTTGTACAAGGTGTGTGGGTTCATCACATGGGTGGATAGTCGTGTTTTCCAATGATTCAGAATTATCAACGGCACATCTTCTTAATCCTATTTCAAGAGCCAGCATTCAAATCCCAAGCATAGAGACTCTTGATAAGCACAGCTTCTTAGAATGCATCTCTAAAGGTATTGTTTCTTCCAATCCGTCTAGCAACAAGAACTTTTTTGTGGTAGTGAAATATGACAGGAAACTAGCATTCTGGAAGCATGGAGACAAATATTCATGGACAAAGTTGAATGATAATGTGCATTATAAGGATATTATGTTTCACGATGACCAATTAATTGCATTATCAGCCACAGGGACAACTGAGATTTGGAACTTAAGGGAATACCCTCTTCTGGAACCTAGGTATATTAAGGACTCTCCTGCTCGCAGATCAGTTACAGGTACCTATTTGGTGGAGTCATTGATGGGTGAGATTTTATGCTTGGAACAAAGTGGTGTCGGTATGACTTCACAGTTTTGGGTGAGAAAGCTAAATTTGACAGCAGACAAGTGGGAGAATGTGCAAAGTTTAAGCGACCAAAGTTTATATTTGTTTCGTAAACAGTTAATGCCACTGCCGAACCCATGTTTCTTAGGATCTGAAAAAAACTCAATCTACTTCGACACAAAGGATAAAGATTATGGAATATACAACCTTGAAGCAAAAGTAGTACGTTCGATCGGGTCATTTGGCGTACGGTTTAATCCTTATAGTGGACCTGTTTGGATTATTCCTAATCCATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0014070 GO:0016567 GO:0016740 GO:0019005 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023052 GO:0023056 GO:0030163 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032870 GO:0032991 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048545 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1900457 GO:1900459 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

464

Amino Acids

53.1

Weight (kDa)

8.66

Isoelectric Point (pI)

46.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	205 - 434	1.1e-39	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10110 AT1G27540 AT1G27540 AT1G27540 AT1G27580 AT1G67160 AT1G69090 AT2G03560 AT2G03580 AT2G03610 AT2G04810 AT2G04830 AT2G04840 AT2G05970 AT2G14290 AT2G14500 AT2G24080 AT2G33190 AT2G33200 AT3G03726 AT3G03726 AT3G03730 AT3G22333 AT3G22337 AT3G22345 AT4G10820 AT4G12810 AT4G12820 AT4G14165 AT4G17565 AT4G22035 AT4G22060 AT4G22165 AT4G22170 AT4G22180 AT4G22660 AT5G14160 AT5G25290 AT5G25300 AT5G38270 AT5G66830
fragaria_vesca	FvH4_1g02012 FvH4_1g02041 FvH4_1g02212 FvH4_1g02521 FvH4_1g02622 FvH4_1g23804 FvH4_7g23891
rosa_chinensis	RchiOBHm_Chr6g0254461 RchiOBHm_Chr6g0254471 RchiOBHm_Chr6g0254481
rosa_laevigata	RLG00000014912 RLG00000015833 RLG00000015855
rosa_multiflora	Rmu_sc0002296.1_g000011 Rmu_sc0009578.1_g000007 Rmu_sc0009578.1_g000009 Rmu_sc0017669.1_g000012 Rmu_ssc0000481.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018640 Rroxscaffold_2G00153700 Rroxscaffold_7G00210770
rosa_rugosa	Rorug01G0474100.1 Rorug01G0474200
rosa_samantha	Rh2BG027100 Rh2DG027600 Rh2DG027700 Rh5AG407300 Rh5BG420500 Rh6AG069500 Rh6AG069700 Rh6BG062100 Rh6BG062300
rosa_wichuraiana	Rw2G002180 Rw5G038360 Rw6G006110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	912
Acc65I	GGTACC	1 cut(s)	1049
AccB1I	GGYRCC	1 cut(s)	1049
AccI	GTMKAC	3 cut(s)	90, 135, 186
AciI	CCGC	1 cut(s)	462
AclI	AACGTT	1 cut(s)	80
AclWI	GGATC	2 cut(s)	539, 1252
AcoI	YGGCCR	1 cut(s)	10
AcsI	RAATTY	2 cut(s)	398, 1141
AcuI	CTGAAG	1 cut(s)	225
AfaI	GTAC	4 cut(s)	625, 1051, 1320, 1344
AfiI	CCNNNNNNNGG	2 cut(s)	1000, 1361
AflII	CTTAAG	1 cut(s)	982
AgsI	TTSAA	8 cut(s)	85, 125, 277, 379, 714, 728, 895, 1307
AjiI	CACGTC	1 cut(s)	52
AjnI	CCWGG	2 cut(s)	252, 452
AleI	CACNNNNGTG	1 cut(s)	649
AluBI	AGCT	7 cut(s)	143, 219, 304, 349, 480, 762, 1138
AluI	AGCT	7 cut(s)	143, 219, 304, 349, 480, 762, 1138
Alw21I	GWGCWC	2 cut(s)	145, 156
Alw26I	GTCTC	4 cut(s)	64, 515, 737, 864
Alw44I	GTGCAC	1 cut(s)	152
AlwI	GGATC	2 cut(s)	539, 1252
AoxI	GGCC	3 cut(s)	10, 200, 255
ApaLI	GTGCAC	1 cut(s)	152
ApeKI	GCWGC	2 cut(s)	158, 464
ApoI	RAATTY	2 cut(s)	398, 1141
ArsI	GACNNNNNNTTYG	2 cut(s)	493, 525
AseI	ATTAAT	1 cut(s)	941
Asp718I	GGTACC	1 cut(s)	1049
AspA2I	CCTAGG	1 cut(s)	1007
AspLEI	GCGC	1 cut(s)	171
AspS9I	GGNCC	1 cut(s)	1364
AsuHPI	GGTGA	3 cut(s)	602, 1088, 1141
AvaII	GGWCC	1 cut(s)	1364
AvrII	CCTAGG	1 cut(s)	1007
AxyI	CCTNAGG	1 cut(s)	237
BaeGI	GKGCMC	1 cut(s)	156
BalI	TGGCCA	1 cut(s)	12
BanI	GGYRCC	1 cut(s)	1049
BanII	GRGCYC	1 cut(s)	145
BarI	GAAGNNNNNNTAC	2 cut(s)	778, 810
BbsI	GAAGAC	1 cut(s)	213
Bbv12I	GWGCWC	2 cut(s)	145, 156
BbvI	GCAGC	2 cut(s)	170, 451
BccI	CCATC	4 cut(s)	221, 380, 538, 1066
BceAI	ACGGC	3 cut(s)	167, 425, 705
BciT130I	CCWGG	2 cut(s)	254, 454
BciVI	GTATCC	1 cut(s)	276
BclI	TGATCA	1 cut(s)	607
BcoDI	GTCTC	4 cut(s)	64, 515, 737, 864
BfaI	CTAG	4 cut(s)	365, 807, 851, 1008
BfoI	RGCGCY	1 cut(s)	172
BfrI	CTTAAG	1 cut(s)	982
BfuI	GTATCC	1 cut(s)	276
BisI	GCNGC	2 cut(s)	159, 465
BlnI	CCTAGG	1 cut(s)	1007
BlsI	GCNGC	2 cut(s)	160, 466
Bme1390I	CCNGG	2 cut(s)	254, 454
Bme18I	GGWCC	1 cut(s)	1364
BmgBI	CACGTC	1 cut(s)	52
BmgT120I	GGNCC	1 cut(s)	1364
BmiI	GGNNCC	2 cut(s)	1005, 1051
BmrFI	CCNGG	2 cut(s)	254, 454
BmrI	ACTGGG	1 cut(s)	32
BmsI	GCATC	2 cut(s)	552, 783
BmuI	ACTGGG	1 cut(s)	32
BpiI	GAAGAC	1 cut(s)	213
BpmI	CTGGAG	1 cut(s)	475
BsaJI	CCNNGG	3 cut(s)	409, 1007, 1388
Bsc4I	CCNNNNNNNGG	2 cut(s)	1000, 1361
Bse1I	ACTGG	1 cut(s)	38
Bse21I	CCTNAGG	1 cut(s)	237
Bse3DI	GCAATG	2 cut(s)	491, 601
BseBI	CCWGG	2 cut(s)	254, 454
BseDI	CCNNGG	3 cut(s)	409, 1007, 1388
BseGI	GGATG	3 cut(s)	11, 405, 530
BseLI	CCNNNNNNNGG	2 cut(s)	1000, 1361
BseMI	GCAATG	2 cut(s)	491, 601
BseMII	CTCAG	3 cut(s)	228, 336, 960
BseNI	ACTGG	1 cut(s)	38
BseSI	GKGCMC	1 cut(s)	156
BseXI	GCAGC	2 cut(s)	170, 451
Bsh1285I	CGRYCG	1 cut(s)	1329
BshFI	GGCC	3 cut(s)	12, 202, 257
BshNI	GGYRCC	1 cut(s)	1049
BsiEI	CGRYCG	1 cut(s)	1329
BsiHKAI	GWGCWC	2 cut(s)	145, 156
BsiWI	CGTACG	1 cut(s)	1342
BslFI	GGGAC	1 cut(s)	976
BslI	CCNNNNNNNGG	2 cut(s)	1000, 1361
BsmAI	GTCTC	4 cut(s)	64, 515, 737, 864
BsmFI	GGGAC	1 cut(s)	976
BsmI	GAATGC	3 cut(s)	723, 776, 854
BsnI	GGCC	3 cut(s)	12, 202, 257
Bsp1286I	GDGCHC	2 cut(s)	145, 156
Bsp1407I	TGTACA	1 cut(s)	623
Bsp143I	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
Bsp19I	CCATGG	1 cut(s)	1388
BspACI	CCGC	1 cut(s)	462
BspANI	GGCC	3 cut(s)	12, 202, 257
BspCNI	CTCAG	3 cut(s)	229, 337, 961
BspLI	GGNNCC	2 cut(s)	1005, 1051
BspPI	GGATC	2 cut(s)	539, 1252
BspT107I	GGYRCC	1 cut(s)	1049
BspTI	CTTAAG	1 cut(s)	982
BsrDI	GCAATG	2 cut(s)	491, 601
BsrGI	TGTACA	1 cut(s)	623
BsrI	ACTGG	1 cut(s)	38
BssECI	CCNNGG	3 cut(s)	409, 1007, 1388
BssMI	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
BssT1I	CCWWGG	3 cut(s)	409, 1007, 1388
Bst2UI	CCWGG	2 cut(s)	254, 454
Bst4CI	ACNGT	4 cut(s)	191, 1122, 1212, 1347
Bst6I	CTCTTC	2 cut(s)	96, 1002
BstAFI	CTTAAG	1 cut(s)	982
BstAUI	TGTACA	1 cut(s)	623
BstC8I	GCNNGC	3 cut(s)	156, 721, 1033
BstDEI	CTNAG	5 cut(s)	237, 345, 766, 969, 1240
BstDSI	CCRYGG	1 cut(s)	1388
BstF5I	GGATG	3 cut(s)	11, 405, 530
BstH2I	RGCGCY	1 cut(s)	172
BstHHI	GCGC	1 cut(s)	171
BstKTI	GATC	6 cut(s)	249, 547, 610, 1040, 1247, 1329
BstMAI	GTCTC	4 cut(s)	64, 515, 737, 864
BstMBI	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
BstMCI	CGRYCG	1 cut(s)	1329
BstMWI	GCNNNNNNNGC	1 cut(s)	953
BstNI	CCWGG	2 cut(s)	254, 454
BstSCI	CCNGG	2 cut(s)	252, 452
BstSLI	GKGCMC	1 cut(s)	156
BstV1I	GCAGC	2 cut(s)	170, 451
BstV2I	GAAGAC	1 cut(s)	213
BstX2I	RGATCY	1 cut(s)	1244
BstYI	RGATCY	1 cut(s)	1244
Bsu36I	CCTNAGG	1 cut(s)	237
BsuI	GTATCC	1 cut(s)	276
BsuRI	GGCC	3 cut(s)	12, 202, 257
BtgI	CCRYGG	1 cut(s)	1388
BtrI	CACGTC	1 cut(s)	52
BtsCI	GGATG	3 cut(s)	11, 405, 530
BtsI	GCAGTG	1 cut(s)	1220
BtsIMutI	CAGTG	2 cut(s)	45, 1220
Cac8I	GCNNGC	3 cut(s)	156, 721, 1033
CfoI	GCGC	1 cut(s)	171
Cfr13I	GGNCC	1 cut(s)	1364
Csp6I	GTAC	4 cut(s)	624, 1050, 1319, 1343
CspCI	CAANNNNNGTGG	2 cut(s)	615, 650
CviAII	CATG	8 cut(s)	163, 175, 507, 647, 866, 882, 1233, 1389
CviQI	GTAC	4 cut(s)	624, 1050, 1319, 1343
DdeI	CTNAG	5 cut(s)	237, 345, 766, 969, 1240
DpnI	GATC	6 cut(s)	248, 546, 609, 1039, 1246, 1328
DpnII	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
DraI	TTTAAA	1 cut(s)	436
EaeI	YGGCCR	1 cut(s)	10
Eam1104I	CTCTTC	2 cut(s)	96, 1002
EarI	CTCTTC	2 cut(s)	96, 1002
Ecl136II	GAGCTC	1 cut(s)	143
Eco130I	CCWWGG	3 cut(s)	409, 1007, 1388
Eco147I	AGGCCT	1 cut(s)	202
Eco24I	GRGCYC	1 cut(s)	145
Eco47I	GGWCC	1 cut(s)	1364
Eco53kI	GAGCTC	1 cut(s)	143
Eco57I	CTGAAG	1 cut(s)	225
Eco81I	CCTNAGG	1 cut(s)	237
EcoICRI	GAGCTC	1 cut(s)	143
EcoRII	CCWGG	2 cut(s)	252, 452
EcoT14I	CCWWGG	3 cut(s)	409, 1007, 1388
EcoT22I	ATGCAT	1 cut(s)	776
EcoT38I	GRGCYC	1 cut(s)	145
ErhI	CCWWGG	3 cut(s)	409, 1007, 1388
FaeI	CATG	8 cut(s)	166, 178, 510, 650, 869, 885, 1236, 1392
FalI	AAGNNNNNCTT	2 cut(s)	746, 778
FaqI	GGGAC	1 cut(s)	976
FatI	CATG	8 cut(s)	162, 174, 506, 646, 865, 881, 1232, 1388
FbaI	TGATCA	1 cut(s)	607
FblI	GTMKAC	3 cut(s)	90, 135, 186
Fnu4HI	GCNGC	2 cut(s)	159, 465
FokI	GGATG	3 cut(s)	18, 392, 517
FriOI	GRGCYC	1 cut(s)	145
Fsp4HI	GCNGC	2 cut(s)	159, 465
FspBI	CTAG	4 cut(s)	365, 807, 851, 1008
GlaI	GCGC	1 cut(s)	170
GluI	GCNGC	2 cut(s)	159, 465
GsuI	CTGGAG	1 cut(s)	475
HaeII	RGCGCY	1 cut(s)	172
HaeIII	GGCC	3 cut(s)	12, 202, 257
HhaI	GCGC	1 cut(s)	171
Hin1II	CATG	8 cut(s)	166, 178, 510, 650, 869, 885, 1236, 1392
Hin6I	GCGC	1 cut(s)	169
HinP1I	GCGC	1 cut(s)	169
HincII	GTYRAC	3 cut(s)	91, 136, 187
HindII	GTYRAC	3 cut(s)	91, 136, 187
HindIII	AAGCTT	1 cut(s)	217
HinfI	GANTC	5 cut(s)	368, 674, 745, 1022, 1064
HphI	GGTGA	3 cut(s)	602, 1088, 1141
Hpy166II	GTNNAC	7 cut(s)	55, 91, 136, 154, 187, 1208, 1364
Hpy188I	TCNGA	4 cut(s)	346, 397, 679, 1249
Hpy188III	TCNNGA	9 cut(s)	244, 365, 376, 574, 714, 749, 859, 929, 1001
Hpy8I	GTNNAC	7 cut(s)	55, 91, 136, 154, 187, 1208, 1364
Hpy99I	CGWCG	4 cut(s)	53, 140, 188, 191
HpyAV	CCTTC	6 cut(s)	79, 111, 371, 402, 544, 623
HpyCH4III	ACNGT	4 cut(s)	191, 1122, 1212, 1347
HpyCH4IV	ACGT	5 cut(s)	51, 80, 486, 579, 1321
HpyCH4V	TGCA	7 cut(s)	154, 467, 565, 774, 907, 947, 1171
HpyF10VI	GCNNNNNNNGC	1 cut(s)	953
HpyF3I	CTNAG	5 cut(s)	237, 345, 766, 969, 1240
HpySE526I	ACGT	5 cut(s)	51, 80, 486, 579, 1321
Hsp92II	CATG	8 cut(s)	166, 178, 510, 650, 869, 885, 1236, 1392
HspAI	GCGC	1 cut(s)	169
KpnI	GGTACC	1 cut(s)	1053
Ksp22I	TGATCA	1 cut(s)	607
Kzo9I	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
LmnI	GCTCC	1 cut(s)	140
Lsp1109I	GCAGC	2 cut(s)	170, 451
LweI	GCATC	2 cut(s)	552, 783
MaeI	CTAG	4 cut(s)	365, 807, 851, 1008
MaeII	ACGT	5 cut(s)	51, 80, 486, 579, 1321
MaeIII	GTNAC	1 cut(s)	1042
MalI	GATC	6 cut(s)	248, 546, 609, 1039, 1246, 1328
MboI	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
MboII	GAAGA	7 cut(s)	113, 120, 137, 218, 689, 786, 989
MflI	RGATCY	1 cut(s)	1244
MhlI	GDGCHC	2 cut(s)	145, 156
MlsI	TGGCCA	1 cut(s)	12
MluCI	AATT	5 cut(s)	398, 680, 938, 942, 1141
MluNI	TGGCCA	1 cut(s)	12
MlyI	GAGTC	4 cut(s)	377, 739, 1016, 1073
MnlI	CCTC	5 cut(s)	182, 232, 507, 548, 1005
Mox20I	TGGCCA	1 cut(s)	12
Mph1103I	ATGCAT	1 cut(s)	776
MscI	TGGCCA	1 cut(s)	12
MseI	TTAA	8 cut(s)	435, 702, 941, 983, 1017, 1178, 1214, 1350
MslI	CAYNNNNRTG	1 cut(s)	649
Msp20I	TGGCCA	1 cut(s)	12
MspA1I	CMGCKG	1 cut(s)	464
MspCI	CTTAAG	1 cut(s)	982
MspR9I	CCNGG	2 cut(s)	254, 454
Mva1269I	GAATGC	3 cut(s)	723, 776, 854
MvaI	CCWGG	2 cut(s)	254, 454
MwoI	GCNNNNNNNGC	1 cut(s)	953
NcoI	CCATGG	1 cut(s)	1388
NdeII	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
NlaIII	CATG	8 cut(s)	166, 178, 510, 650, 869, 885, 1236, 1392
NlaIV	GGNNCC	2 cut(s)	1005, 1051
NsiI	ATGCAT	1 cut(s)	776
OliI	CACNNNNGTG	1 cut(s)	649
PceI	AGGCCT	1 cut(s)	202
PctI	GAATGC	3 cut(s)	723, 776, 854
PfeI	GAWTC	1 cut(s)	674
Pfl23II	CGTACG	1 cut(s)	1342
PfoI	TCCNGGA	1 cut(s)	452
PkrI	GCNGC	2 cut(s)	160, 466
Ple19I	CGATCG	1 cut(s)	1329
PleI	GAGTC	4 cut(s)	376, 739, 1016, 1072
PpsI	GAGTC	4 cut(s)	376, 739, 1016, 1072
PshBI	ATTAAT	1 cut(s)	941
PsiI	TTATAA	1 cut(s)	912
Psp124BI	GAGCTC	1 cut(s)	145
Psp1406I	AACGTT	1 cut(s)	80
Psp6I	CCWGG	2 cut(s)	252, 452
PspGI	CCWGG	2 cut(s)	252, 452
PspLI	CGTACG	1 cut(s)	1342
PspN4I	GGNNCC	2 cut(s)	1005, 1051
PspPI	GGNCC	1 cut(s)	1364
PsuI	RGATCY	1 cut(s)	1244
PvuI	CGATCG	1 cut(s)	1329
RsaI	GTAC	4 cut(s)	625, 1051, 1320, 1344
RsaNI	GTAC	4 cut(s)	624, 1050, 1319, 1343
RseI	CAYNNNNRTG	1 cut(s)	649
SacI	GAGCTC	1 cut(s)	145
SalI	GTCGAC	3 cut(s)	89, 134, 185
SaqAI	TTAA	8 cut(s)	435, 702, 941, 983, 1017, 1178, 1214, 1350
SatI	GCNGC	2 cut(s)	159, 465
Sau3AI	GATC	6 cut(s)	246, 544, 607, 1037, 1244, 1326
Sau96I	GGNCC	1 cut(s)	1364
SchI	GAGTC	4 cut(s)	377, 739, 1016, 1073
ScrFI	CCNGG	2 cut(s)	254, 454
SduI	GDGCHC	2 cut(s)	145, 156
SfaNI	GCATC	2 cut(s)	552, 783
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	1 cut(s)	1364
SmiMI	CAYNNNNRTG	1 cut(s)	649
SmlI	CTYRAG	1 cut(s)	982
SmoI	CTYRAG	1 cut(s)	982
Sse9I	AATT	5 cut(s)	398, 680, 938, 942, 1141
SseBI	AGGCCT	1 cut(s)	202
SsiI	CCGC	1 cut(s)	462
SspI	AATATT	1 cut(s)	878
SspMI	CTAG	4 cut(s)	365, 807, 851, 1008
SstI	GAGCTC	1 cut(s)	145
StuI	AGGCCT	1 cut(s)	202
StyD4I	CCNGG	2 cut(s)	252, 452
StyI	CCWWGG	3 cut(s)	409, 1007, 1388
TaaI	ACNGT	4 cut(s)	191, 1122, 1212, 1347
TaiI	ACGT	5 cut(s)	54, 83, 489, 582, 1324
TaqI	TCGA	7 cut(s)	90, 135, 186, 243, 499, 1269, 1325
TaqII	GACCGA	1 cut(s)	239
TasI	AATT	5 cut(s)	398, 680, 938, 942, 1141
TatI	WGTACW	1 cut(s)	623
TfiI	GAWTC	1 cut(s)	674
Tru1I	TTAA	8 cut(s)	435, 702, 941, 983, 1017, 1178, 1214, 1350
Tru9I	TTAA	8 cut(s)	435, 702, 941, 983, 1017, 1178, 1214, 1350
TscAI	CASTG	2 cut(s)	45, 1227
TseI	GCWGC	2 cut(s)	158, 464
TspDTI	ATGAA	4 cut(s)	179, 509, 630, 870
TspGWI	ACGGA	2 cut(s)	153, 792
TspRI	CASTG	2 cut(s)	45, 1227
Vha464I	CTTAAG	1 cut(s)	982
VneI	GTGCAC	1 cut(s)	152
VpaK11BI	GGWCC	1 cut(s)	1364
VspI	ATTAAT	1 cut(s)	941
XapI	RAATTY	2 cut(s)	398, 1141
XbaI	TCTAGA	1 cut(s)	364
XmaJI	CCTAGG	1 cut(s)	1007
XmiI	GTMKAC	3 cut(s)	90, 135, 186
XspI	CTAG	4 cut(s)	365, 807, 851, 1008
Zsp2I	ATGCAT	1 cut(s)	776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.