f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 255 - 508 | 2.8e-32 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1095 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1179 |
| AccI | GTMKAC | 4 cut(s) | 99, 144, 258, 309 |
| AciI | CCGC | 8 cut(s) | 14, 137, 186, 354, 645, 898, 1088, 1419 |
| AclWI | GGATC | 2 cut(s) | 24, 728 |
| AcoI | YGGCCR | 2 cut(s) | 72, 138 |
| AcsI | RAATTY | 4 cut(s) | 581, 718, 1166, 1225 |
| AcuI | CTGAAG | 2 cut(s) | 318, 420 |
| AfaI | GTAC | 3 cut(s) | 434, 668, 1614 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 224, 1150, 1179 |
| AflIII | ACRYGT | 1 cut(s) | 1050 |
| AgsI | TTSAA | 9 cut(s) | 485, 562, 850, 906, 982, 1069, 1189, 1514, 1553 |
| AjiI | CACGTC | 1 cut(s) | 223 |
| AjnI | CCWGG | 4 cut(s) | 635, 910, 1055, 1572 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 962, 994 |
| Alw21I | GWGCWC | 1 cut(s) | 322 |
| Alw26I | GTCTC | 7 cut(s) | 55, 118, 371, 506, 698, 1035, 1420 |
| AlwI | GGATC | 2 cut(s) | 24, 728 |
| AoxI | GGCC | 4 cut(s) | 72, 138, 215, 895 |
| ApeKI | GCWGC | 3 cut(s) | 340, 647, 1520 |
| ApoI | RAATTY | 4 cut(s) | 581, 718, 1166, 1225 |
| AseI | ATTAAT | 1 cut(s) | 1620 |
| AspLEI | GCGC | 2 cut(s) | 345, 917 |
| AsuHPI | GGTGA | 5 cut(s) | 398, 1127, 1289, 1462, 1589 |
| AsuNHI | GCTAGC | 1 cut(s) | 302 |
| BanII | GRGCYC | 1 cut(s) | 322 |
| BauI | CACGAG | 1 cut(s) | 786 |
| BbsI | GAAGAC | 2 cut(s) | 843, 1053 |
| Bbv12I | GWGCWC | 1 cut(s) | 322 |
| BbvI | GCAGC | 3 cut(s) | 352, 634, 1532 |
| BccI | CCATC | 6 cut(s) | 356, 377, 1076, 1252, 1441, 1493 |
| BceAI | ACGGC | 4 cut(s) | 87, 125, 150, 608 |
| BciT130I | CCWGG | 4 cut(s) | 637, 912, 1057, 1574 |
| BciVI | GTATCC | 1 cut(s) | 617 |
| BcoDI | GTCTC | 7 cut(s) | 55, 118, 371, 506, 698, 1035, 1420 |
| BfaI | CTAG | 5 cut(s) | 303, 548, 930, 1022, 1343 |
| BfmI | CTRYAG | 2 cut(s) | 357, 1518 |
| BfoI | RGCGCY | 2 cut(s) | 346, 918 |
| BfuI | GTATCC | 1 cut(s) | 617 |
| BglII | AGATCT | 1 cut(s) | 403 |
| BisI | GCNGC | 6 cut(s) | 138, 341, 645, 648, 898, 1521 |
| BlsI | GCNGC | 6 cut(s) | 139, 342, 646, 649, 899, 1522 |
| BmcAI | AGTACT | 1 cut(s) | 434 |
| Bme1390I | CCNGG | 4 cut(s) | 637, 912, 1057, 1574 |
| BmgBI | CACGTC | 1 cut(s) | 223 |
| BmrFI | CCNGG | 4 cut(s) | 637, 912, 1057, 1574 |
| BmtI | GCTAGC | 1 cut(s) | 306 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1392 |
| BpiI | GAAGAC | 2 cut(s) | 843, 1053 |
| BpmI | CTGGAG | 1 cut(s) | 658 |
| BsaI | GGTCTC | 3 cut(s) | 55, 118, 371 |
| BsaJI | CCNNGG | 4 cut(s) | 680, 910, 1573, 1658 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 676, 706 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 224, 1150, 1179 |
| Bse3DI | GCAATG | 1 cut(s) | 1503 |
| BseBI | CCWGG | 4 cut(s) | 637, 912, 1057, 1574 |
| BseDI | CCNNGG | 4 cut(s) | 680, 910, 1573, 1658 |
| BseGI | GGATG | 3 cut(s) | 190, 965, 1475 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 224, 1150, 1179 |
| BseMI | GCAATG | 1 cut(s) | 1503 |
| BseMII | CTCAG | 2 cut(s) | 519, 932 |
| BseRI | GAGGAG | 1 cut(s) | 774 |
| BseX3I | CGGCCG | 1 cut(s) | 138 |
| BseXI | GCAGC | 3 cut(s) | 352, 634, 1532 |
| Bsh1285I | CGRYCG | 1 cut(s) | 141 |
| BshFI | GGCC | 4 cut(s) | 74, 140, 217, 897 |
| BsiEI | CGRYCG | 1 cut(s) | 141 |
| BsiHKAI | GWGCWC | 1 cut(s) | 322 |
| BsiSI | CCGG | 1 cut(s) | 183 |
| BsiWI | CGTACG | 1 cut(s) | 666 |
| BslFI | GGGAC | 1 cut(s) | 1196 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 224, 1150, 1179 |
| BsmAI | GTCTC | 7 cut(s) | 55, 118, 371, 506, 698, 1035, 1420 |
| BsmBI | CGTCTC | 1 cut(s) | 1035 |
| BsmFI | GGGAC | 1 cut(s) | 1196 |
| BsnI | GGCC | 4 cut(s) | 74, 140, 217, 897 |
| Bso31I | GGTCTC | 3 cut(s) | 55, 118, 371 |
| Bsp1286I | GDGCHC | 1 cut(s) | 322 |
| Bsp1407I | TGTACA | 1 cut(s) | 1612 |
| Bsp143I | GATC | 4 cut(s) | 16, 403, 555, 733 |
| Bsp19I | CCATGG | 1 cut(s) | 1658 |
| BspACI | CCGC | 8 cut(s) | 14, 137, 186, 354, 645, 898, 1088, 1419 |
| BspANI | GGCC | 4 cut(s) | 74, 140, 217, 897 |
| BspCNI | CTCAG | 2 cut(s) | 520, 931 |
| BspHI | TCATGA | 1 cut(s) | 1135 |
| BspMAI | CTGCAG | 1 cut(s) | 1522 |
| BspOI | GCTAGC | 1 cut(s) | 306 |
| BspPI | GGATC | 2 cut(s) | 24, 728 |
| BspTNI | GGTCTC | 3 cut(s) | 55, 118, 371 |
| BsrDI | GCAATG | 1 cut(s) | 1503 |
| BsrGI | TGTACA | 1 cut(s) | 1612 |
| BssECI | CCNNGG | 4 cut(s) | 680, 910, 1573, 1658 |
| BssMI | GATC | 4 cut(s) | 16, 403, 555, 733 |
| BssSI | CACGAG | 1 cut(s) | 786 |
| BssT1I | CCWWGG | 1 cut(s) | 1658 |
| Bst2BI | CACGAG | 1 cut(s) | 786 |
| Bst2UI | CCWGG | 4 cut(s) | 637, 912, 1057, 1574 |
| Bst4CI | ACNGT | 1 cut(s) | 1211 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstAUI | TGTACA | 1 cut(s) | 1612 |
| BstC8I | GCNNGC | 2 cut(s) | 12, 304 |
| BstDEI | CTNAG | 4 cut(s) | 528, 918, 1285, 1465 |
| BstDSI | CCRYGG | 1 cut(s) | 1658 |
| BstF5I | GGATG | 3 cut(s) | 190, 965, 1475 |
| BstH2I | RGCGCY | 2 cut(s) | 346, 918 |
| BstHHI | GCGC | 2 cut(s) | 345, 917 |
| BstKTI | GATC | 4 cut(s) | 19, 406, 558, 736 |
| BstMAI | GTCTC | 7 cut(s) | 55, 118, 371, 506, 698, 1035, 1420 |
| BstMBI | GATC | 4 cut(s) | 16, 403, 555, 733 |
| BstMCI | CGRYCG | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 939 |
| BstNI | CCWGG | 4 cut(s) | 637, 912, 1057, 1574 |
| BstNSI | RCATGY | 1 cut(s) | 1054 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1392 |
| BstSCI | CCNGG | 4 cut(s) | 635, 910, 1055, 1572 |
| BstSFI | CTRYAG | 2 cut(s) | 357, 1518 |
| BstV1I | GCAGC | 3 cut(s) | 352, 634, 1532 |
| BstV2I | GAAGAC | 2 cut(s) | 843, 1053 |
| BstX2I | RGATCY | 1 cut(s) | 403 |
| BstYI | RGATCY | 1 cut(s) | 403 |
| BstZI | CGGCCG | 1 cut(s) | 138 |
| BsuI | GTATCC | 1 cut(s) | 617 |
| BsuRI | GGCC | 4 cut(s) | 74, 140, 217, 897 |
| BtgI | CCRYGG | 1 cut(s) | 1658 |
| BtrI | CACGTC | 1 cut(s) | 223 |
| BtsCI | GGATG | 3 cut(s) | 190, 965, 1475 |
| Cac8I | GCNNGC | 2 cut(s) | 12, 304 |
| CciI | TCATGA | 1 cut(s) | 1135 |
| CfoI | GCGC | 2 cut(s) | 345, 917 |
| CseI | GACGC | 1 cut(s) | 295 |
| Csp6I | GTAC | 3 cut(s) | 433, 667, 1613 |
| CviQI | GTAC | 3 cut(s) | 433, 667, 1613 |
| DdeI | CTNAG | 4 cut(s) | 528, 918, 1285, 1465 |
| DpnI | GATC | 4 cut(s) | 18, 405, 557, 735 |
| DpnII | GATC | 4 cut(s) | 16, 403, 555, 733 |
| DraI | TTTAAA | 2 cut(s) | 619, 1323 |
| EaeI | YGGCCR | 2 cut(s) | 72, 138 |
| EagI | CGGCCG | 1 cut(s) | 138 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| EciI | GGCGGA | 2 cut(s) | 29, 1434 |
| Ecl136II | GAGCTC | 1 cut(s) | 320 |
| EclXI | CGGCCG | 1 cut(s) | 138 |
| Eco130I | CCWWGG | 1 cut(s) | 1658 |
| Eco147I | AGGCCT | 1 cut(s) | 217 |
| Eco24I | GRGCYC | 1 cut(s) | 322 |
| Eco31I | GGTCTC | 3 cut(s) | 55, 118, 371 |
| Eco52I | CGGCCG | 1 cut(s) | 138 |
| Eco53kI | GAGCTC | 1 cut(s) | 320 |
| Eco57I | CTGAAG | 2 cut(s) | 318, 420 |
| EcoICRI | GAGCTC | 1 cut(s) | 320 |
| EcoRI | GAATTC | 1 cut(s) | 1225 |
| EcoRII | CCWGG | 4 cut(s) | 635, 910, 1055, 1572 |
| EcoT14I | CCWWGG | 1 cut(s) | 1658 |
| EcoT38I | GRGCYC | 1 cut(s) | 322 |
| ErhI | CCWWGG | 1 cut(s) | 1658 |
| Esp3I | CGTCTC | 1 cut(s) | 1035 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 246, 278 |
| FaqI | GGGAC | 1 cut(s) | 1196 |
| FauNDI | CATATG | 1 cut(s) | 811 |
| FblI | GTMKAC | 4 cut(s) | 99, 144, 258, 309 |
| Fnu4HI | GCNGC | 6 cut(s) | 138, 341, 645, 648, 898, 1521 |
| FokI | GGATG | 3 cut(s) | 177, 952, 1482 |
| FriOI | GRGCYC | 1 cut(s) | 322 |
| Fsp4HI | GCNGC | 6 cut(s) | 138, 341, 645, 648, 898, 1521 |
| FspBI | CTAG | 5 cut(s) | 303, 548, 930, 1022, 1343 |
| GlaI | GCGC | 2 cut(s) | 344, 916 |
| GluI | GCNGC | 6 cut(s) | 138, 341, 645, 648, 898, 1521 |
| GsuI | CTGGAG | 1 cut(s) | 658 |
| HaeII | RGCGCY | 2 cut(s) | 346, 918 |
| HaeIII | GGCC | 4 cut(s) | 74, 140, 217, 897 |
| HapII | CCGG | 1 cut(s) | 183 |
| HgaI | GACGC | 1 cut(s) | 295 |
| HhaI | GCGC | 2 cut(s) | 345, 917 |
| Hin6I | GCGC | 2 cut(s) | 343, 915 |
| HinP1I | GCGC | 2 cut(s) | 343, 915 |
| HincII | GTYRAC | 4 cut(s) | 145, 259, 294, 310 |
| HindII | GTYRAC | 4 cut(s) | 145, 259, 294, 310 |
| HindIII | AAGCTT | 1 cut(s) | 566 |
| HinfI | GANTC | 9 cut(s) | 328, 445, 499, 551, 597, 685, 854, 1262, 1514 |
| HpaII | CCGG | 1 cut(s) | 183 |
| HphI | GGTGA | 5 cut(s) | 398, 1127, 1289, 1462, 1589 |
| Hpy166II | GTNNAC | 8 cut(s) | 55, 100, 145, 259, 294, 310, 1453, 1615 |
| Hpy188I | TCNGA | 9 cut(s) | 408, 450, 529, 580, 602, 611, 684, 921, 1013 |
| Hpy188III | TCNNGA | 5 cut(s) | 548, 559, 763, 1136, 1189 |
| Hpy8I | GTNNAC | 8 cut(s) | 55, 100, 145, 259, 294, 310, 1453, 1615 |
| Hpy99I | CGWCG | 5 cut(s) | 146, 149, 311, 314, 317 |
| HpyAV | CCTTC | 7 cut(s) | 98, 207, 469, 585, 733, 935, 1577 |
| HpyCH4III | ACNGT | 1 cut(s) | 1211 |
| HpyCH4IV | ACGT | 4 cut(s) | 222, 604, 669, 768 |
| HpyCH4V | TGCA | 7 cut(s) | 10, 340, 650, 1006, 1238, 1520, 1538 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 939 |
| HpyF3I | CTNAG | 4 cut(s) | 528, 918, 1285, 1465 |
| HpySE526I | ACGT | 4 cut(s) | 222, 604, 669, 768 |
| HspAI | GCGC | 2 cut(s) | 343, 915 |
| Kzo9I | GATC | 4 cut(s) | 16, 403, 555, 733 |
| LmnI | GCTCC | 1 cut(s) | 317 |
| Lsp1109I | GCAGC | 3 cut(s) | 352, 634, 1532 |
| MaeI | CTAG | 5 cut(s) | 303, 548, 930, 1022, 1343 |
| MaeII | ACGT | 4 cut(s) | 222, 604, 669, 768 |
| MaeIII | GTNAC | 2 cut(s) | 392, 1277 |
| MalI | GATC | 4 cut(s) | 18, 405, 557, 735 |
| MboI | GATC | 4 cut(s) | 16, 403, 555, 733 |
| MflI | RGATCY | 1 cut(s) | 403 |
| MhlI | GDGCHC | 1 cut(s) | 322 |
| MluCI | AATT | 8 cut(s) | 520, 581, 718, 1007, 1166, 1225, 1505, 1621 |
| MlyI | GAGTC | 4 cut(s) | 508, 560, 694, 1271 |
| MseI | TTAA | 5 cut(s) | 438, 618, 879, 1322, 1620 |
| MslI | CAYNNNNRTG | 1 cut(s) | 814 |
| MspA1I | CMGCKG | 2 cut(s) | 356, 647 |
| MspI | CCGG | 1 cut(s) | 183 |
| MspR9I | CCNGG | 4 cut(s) | 637, 912, 1057, 1574 |
| MvaI | CCWGG | 4 cut(s) | 637, 912, 1057, 1574 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 939 |
| NcoI | CCATGG | 1 cut(s) | 1658 |
| NdeI | CATATG | 1 cut(s) | 811 |
| NdeII | GATC | 4 cut(s) | 16, 403, 555, 733 |
| NheI | GCTAGC | 1 cut(s) | 302 |
| NmuCI | GTSAC | 1 cut(s) | 1277 |
| NspI | RCATGY | 1 cut(s) | 1054 |
| PagI | TCATGA | 1 cut(s) | 1135 |
| PceI | AGGCCT | 1 cut(s) | 217 |
| PciI | ACATGT | 1 cut(s) | 1050 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 946 |
| PfeI | GAWTC | 5 cut(s) | 328, 445, 597, 854, 1514 |
| Pfl23II | CGTACG | 1 cut(s) | 666 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1179 |
| PfoI | TCCNGGA | 2 cut(s) | 635, 1055 |
| PkrI | GCNGC | 6 cut(s) | 139, 342, 646, 649, 899, 1522 |
| PleI | GAGTC | 4 cut(s) | 507, 559, 693, 1270 |
| PpsI | GAGTC | 4 cut(s) | 507, 559, 693, 1270 |
| PscI | ACATGT | 1 cut(s) | 1050 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1392 |
| PshBI | ATTAAT | 1 cut(s) | 1620 |
| PsiI | TTATAA | 1 cut(s) | 1095 |
| Psp124BI | GAGCTC | 1 cut(s) | 322 |
| Psp6I | CCWGG | 4 cut(s) | 635, 910, 1055, 1572 |
| PspGI | CCWGG | 4 cut(s) | 635, 910, 1055, 1572 |
| PspLI | CGTACG | 1 cut(s) | 666 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1472, 1504 |
| PstI | CTGCAG | 1 cut(s) | 1522 |
| PsuI | RGATCY | 1 cut(s) | 403 |
| RsaI | GTAC | 3 cut(s) | 434, 668, 1614 |
| RsaNI | GTAC | 3 cut(s) | 433, 667, 1613 |
| RseI | CAYNNNNRTG | 1 cut(s) | 814 |
| SacI | GAGCTC | 1 cut(s) | 322 |
| SalI | GTCGAC | 3 cut(s) | 143, 257, 308 |
| SaqAI | TTAA | 5 cut(s) | 438, 618, 879, 1322, 1620 |
| SatI | GCNGC | 6 cut(s) | 138, 341, 645, 648, 898, 1521 |
| Sau3AI | GATC | 4 cut(s) | 16, 403, 555, 733 |
| ScaI | AGTACT | 1 cut(s) | 434 |
| SchI | GAGTC | 4 cut(s) | 508, 560, 694, 1271 |
| ScrFI | CCNGG | 4 cut(s) | 637, 912, 1057, 1574 |
| SduI | GDGCHC | 1 cut(s) | 322 |
| SfcI | CTRYAG | 2 cut(s) | 357, 1518 |
| SgrDI | CGTCGACG | 2 cut(s) | 143, 308 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 814 |
| Sse9I | AATT | 8 cut(s) | 520, 581, 718, 1007, 1166, 1225, 1505, 1621 |
| SseBI | AGGCCT | 1 cut(s) | 217 |
| SsiI | CCGC | 8 cut(s) | 14, 137, 186, 354, 645, 898, 1088, 1419 |
| SspMI | CTAG | 5 cut(s) | 303, 548, 930, 1022, 1343 |
| SstI | GAGCTC | 1 cut(s) | 322 |
| StuI | AGGCCT | 1 cut(s) | 217 |
| StyD4I | CCNGG | 4 cut(s) | 635, 910, 1055, 1572 |
| StyI | CCWWGG | 1 cut(s) | 1658 |
| TaaI | ACNGT | 1 cut(s) | 1211 |
| TaiI | ACGT | 4 cut(s) | 225, 607, 672, 771 |
| TaqI | TCGA | 9 cut(s) | 144, 196, 242, 258, 309, 554, 857, 863, 1445 |
| TaqII | GACCGA | 1 cut(s) | 434 |
| TasI | AATT | 8 cut(s) | 520, 581, 718, 1007, 1166, 1225, 1505, 1621 |
| TatI | WGTACW | 2 cut(s) | 432, 1612 |
| TauI | GCSGC | 3 cut(s) | 140, 647, 900 |
| TfiI | GAWTC | 5 cut(s) | 328, 445, 597, 854, 1514 |
| Tru1I | TTAA | 5 cut(s) | 438, 618, 879, 1322, 1620 |
| Tru9I | TTAA | 5 cut(s) | 438, 618, 879, 1322, 1620 |
| TseFI | GTSAC | 1 cut(s) | 1277 |
| TseI | GCWGC | 3 cut(s) | 340, 647, 1520 |
| Tsp45I | GTSAC | 1 cut(s) | 1277 |
| TspDTI | ATGAA | 6 cut(s) | 54, 795, 954, 1124, 1218, 1647 |
| TspGWI | ACGGA | 4 cut(s) | 330, 364, 720, 1438 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1179 |
| VspI | ATTAAT | 1 cut(s) | 1620 |
| XapI | RAATTY | 4 cut(s) | 581, 718, 1166, 1225 |
| XbaI | TCTAGA | 1 cut(s) | 547 |
| XceI | RCATGY | 1 cut(s) | 1054 |
| XmiI | GTMKAC | 4 cut(s) | 99, 144, 258, 309 |
| XspI | CTAG | 5 cut(s) | 303, 548, 930, 1022, 1343 |
| ZrmI | AGTACT | 1 cut(s) | 434 |