F-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 130 - 404 | 1.8e-42 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 912 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccI | GTMKAC | 2 cut(s) | 1020, 1209 |
| AciI | CCGC | 3 cut(s) | 548, 635, 889 |
| AclWI | GGATC | 5 cut(s) | 341, 532, 545, 1038, 1215 |
| AcoI | YGGCCR | 1 cut(s) | 117 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 2 cut(s) | 198, 389 |
| AfeI | AGCGCT | 1 cut(s) | 233 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 474, 487, 1000, 1231, 1307 |
| AflII | CTTAAG | 1 cut(s) | 235 |
| AgeI | ACCGGT | 1 cut(s) | 563 |
| AgsI | TTSAA | 4 cut(s) | 186, 517, 583, 1247 |
| AluBI | AGCT | 7 cut(s) | 26, 240, 290, 443, 732, 799, 977 |
| AluI | AGCT | 7 cut(s) | 26, 240, 290, 443, 732, 799, 977 |
| Alw26I | GTCTC | 1 cut(s) | 308 |
| AlwI | GGATC | 5 cut(s) | 341, 532, 545, 1038, 1215 |
| Ama87I | CYCGRG | 3 cut(s) | 428, 528, 994 |
| Aor51HI | AGCGCT | 1 cut(s) | 233 |
| AoxI | GGCC | 1 cut(s) | 117 |
| ApeKI | GCWGC | 2 cut(s) | 23, 190 |
| AsiGI | ACCGGT | 1 cut(s) | 563 |
| AspLEI | GCGC | 2 cut(s) | 7, 234 |
| AspS9I | GGNCC | 2 cut(s) | 490, 1234 |
| AsuHPI | GGTGA | 2 cut(s) | 578, 1082 |
| AvaI | CYCGRG | 3 cut(s) | 428, 528, 994 |
| AvaII | GGWCC | 2 cut(s) | 490, 1234 |
| AxyI | CCTNAGG | 1 cut(s) | 1063 |
| BamHI | GGATCC | 1 cut(s) | 537 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BauI | CACGAG | 1 cut(s) | 396 |
| BbvI | GCAGC | 2 cut(s) | 35, 202 |
| BccI | CCATC | 4 cut(s) | 563, 602, 889, 1021 |
| BceAI | ACGGC | 2 cut(s) | 104, 1001 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 246, 280 |
| BclI | TGATCA | 2 cut(s) | 966, 1144 |
| BcoDI | GTCTC | 1 cut(s) | 308 |
| BfaI | CTAG | 5 cut(s) | 102, 444, 554, 690, 1091 |
| BfmI | CTRYAG | 1 cut(s) | 727 |
| BfoI | RGCGCY | 2 cut(s) | 8, 235 |
| BfrI | CTTAAG | 1 cut(s) | 235 |
| BglII | AGATCT | 2 cut(s) | 424, 1087 |
| BisI | GCNGC | 2 cut(s) | 24, 191 |
| BlsI | GCNGC | 2 cut(s) | 25, 192 |
| Bme18I | GGWCC | 2 cut(s) | 490, 1234 |
| BmeT110I | CYCGRG | 3 cut(s) | 428, 528, 994 |
| BmgT120I | GGNCC | 2 cut(s) | 490, 1234 |
| BmiI | GGNNCC | 4 cut(s) | 6, 479, 539, 987 |
| BmsI | GCATC | 4 cut(s) | 82, 254, 780, 1273 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 526, 558 |
| BpmI | CTGGAG | 3 cut(s) | 48, 843, 975 |
| BpuEI | CTTGAG | 1 cut(s) | 903 |
| Bsa29I | ATCGAT | 2 cut(s) | 221, 774 |
| BsaAI | YACGTR | 1 cut(s) | 805 |
| BsaBI | GATNNNNATC | 1 cut(s) | 252 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 3 cut(s) | 159, 329, 995 |
| BsaWI | WCCGGW | 3 cut(s) | 467, 563, 845 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 439, 469 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 474, 487, 1000, 1231, 1307 |
| Bse118I | RCCGGY | 2 cut(s) | 54, 563 |
| Bse1I | ACTGG | 1 cut(s) | 860 |
| Bse21I | CCTNAGG | 1 cut(s) | 1063 |
| Bse8I | GATNNNNATC | 1 cut(s) | 252 |
| BseCI | ATCGAT | 2 cut(s) | 221, 774 |
| BseDI | CCNNGG | 3 cut(s) | 159, 329, 995 |
| BseGI | GGATG | 2 cut(s) | 336, 1288 |
| BseJI | GATNNNNATC | 1 cut(s) | 252 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 474, 487, 1000, 1231, 1307 |
| BseNI | ACTGG | 1 cut(s) | 860 |
| BseXI | GCAGC | 2 cut(s) | 35, 202 |
| BshFI | GGCC | 1 cut(s) | 119 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BshTI | ACCGGT | 1 cut(s) | 563 |
| BshVI | ATCGAT | 2 cut(s) | 221, 774 |
| BsiHKCI | CYCGRG | 3 cut(s) | 428, 528, 994 |
| BsiSI | CCGG | 4 cut(s) | 55, 468, 564, 846 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 474, 487, 1000, 1231, 1307 |
| BsmAI | GTCTC | 1 cut(s) | 308 |
| BsmI | GAATGC | 1 cut(s) | 1010 |
| BsnI | GGCC | 1 cut(s) | 119 |
| BsoBI | CYCGRG | 3 cut(s) | 428, 528, 994 |
| Bsp1407I | TGTACA | 1 cut(s) | 387 |
| Bsp143I | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| Bsp19I | CCATGG | 1 cut(s) | 329 |
| BspACI | CCGC | 3 cut(s) | 548, 635, 889 |
| BspANI | GGCC | 1 cut(s) | 119 |
| BspDI | ATCGAT | 2 cut(s) | 221, 774 |
| BspLI | GGNNCC | 4 cut(s) | 6, 479, 539, 987 |
| BspPI | GGATC | 5 cut(s) | 341, 532, 545, 1038, 1215 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTI | CTTAAG | 1 cut(s) | 235 |
| BsrFI | RCCGGY | 2 cut(s) | 54, 563 |
| BsrGI | TGTACA | 1 cut(s) | 387 |
| BsrI | ACTGG | 1 cut(s) | 860 |
| BssAI | RCCGGY | 2 cut(s) | 54, 563 |
| BssECI | CCNNGG | 3 cut(s) | 159, 329, 995 |
| BssMI | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 396 |
| BssT1I | CCWWGG | 1 cut(s) | 329 |
| Bst2BI | CACGAG | 1 cut(s) | 396 |
| Bst4CI | ACNGT | 4 cut(s) | 832, 1102, 1115, 1199 |
| Bst6I | CTCTTC | 3 cut(s) | 549, 655, 1163 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 235 |
| BstAUI | TGTACA | 1 cut(s) | 387 |
| BstBAI | YACGTR | 1 cut(s) | 805 |
| BstDEI | CTNAG | 3 cut(s) | 215, 809, 1063 |
| BstDSI | CCRYGG | 1 cut(s) | 329 |
| BstF5I | GGATG | 2 cut(s) | 336, 1288 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 235 |
| BstHHI | GCGC | 2 cut(s) | 7, 234 |
| BstKTI | GATC | 9 cut(s) | 221, 336, 427, 540, 969, 1033, 1090, 1147, 1223 |
| BstMAI | GTCTC | 1 cut(s) | 308 |
| BstMBI | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 805 |
| BstSFI | CTRYAG | 1 cut(s) | 727 |
| BstV1I | GCAGC | 2 cut(s) | 35, 202 |
| BstX2I | RGATCY | 3 cut(s) | 424, 537, 1087 |
| BstYI | RGATCY | 3 cut(s) | 424, 537, 1087 |
| Bsu15I | ATCGAT | 2 cut(s) | 221, 774 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1063 |
| BsuRI | GGCC | 1 cut(s) | 119 |
| BsuTUI | ATCGAT | 2 cut(s) | 221, 774 |
| BtgI | CCRYGG | 1 cut(s) | 329 |
| BtgZI | GCGATG | 1 cut(s) | 1194 |
| BtsCI | GGATG | 2 cut(s) | 336, 1288 |
| BtsIMutI | CAGTG | 2 cut(s) | 828, 867 |
| CfoI | GCGC | 2 cut(s) | 7, 234 |
| Cfr10I | RCCGGY | 2 cut(s) | 54, 563 |
| Cfr13I | GGNCC | 2 cut(s) | 490, 1234 |
| ClaI | ATCGAT | 2 cut(s) | 221, 774 |
| CseI | GACGC | 2 cut(s) | 77, 1195 |
| Csp6I | GTAC | 2 cut(s) | 197, 388 |
| CspAI | ACCGGT | 1 cut(s) | 563 |
| CviAII | CATG | 4 cut(s) | 81, 300, 330, 378 |
| CviQI | GTAC | 2 cut(s) | 197, 388 |
| DdeI | CTNAG | 3 cut(s) | 215, 809, 1063 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DpnI | GATC | 9 cut(s) | 220, 335, 426, 539, 968, 1032, 1089, 1146, 1222 |
| DpnII | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| DraI | TTTAAA | 3 cut(s) | 745, 753, 787 |
| EaeI | YGGCCR | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 3 cut(s) | 549, 655, 1163 |
| EarI | CTCTTC | 3 cut(s) | 549, 655, 1163 |
| EciI | GGCGGA | 1 cut(s) | 537 |
| Eco130I | CCWWGG | 1 cut(s) | 329 |
| Eco32I | GATATC | 1 cut(s) | 704 |
| Eco47I | GGWCC | 2 cut(s) | 490, 1234 |
| Eco47III | AGCGCT | 1 cut(s) | 233 |
| Eco81I | CCTNAGG | 1 cut(s) | 1063 |
| Eco88I | CYCGRG | 3 cut(s) | 428, 528, 994 |
| EcoRV | GATATC | 1 cut(s) | 704 |
| EcoT14I | CCWWGG | 1 cut(s) | 329 |
| EcoT22I | ATGCAT | 2 cut(s) | 75, 269 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 329 |
| FaeI | CATG | 4 cut(s) | 84, 303, 333, 381 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1065, 1097 |
| FatI | CATG | 4 cut(s) | 80, 299, 329, 377 |
| FbaI | TGATCA | 2 cut(s) | 966, 1144 |
| FblI | GTMKAC | 2 cut(s) | 1020, 1209 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 191 |
| FokI | GGATG | 2 cut(s) | 323, 1295 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 191 |
| FspBI | CTAG | 5 cut(s) | 102, 444, 554, 690, 1091 |
| GlaI | GCGC | 2 cut(s) | 6, 233 |
| GluI | GCNGC | 2 cut(s) | 24, 191 |
| GsuI | CTGGAG | 3 cut(s) | 48, 843, 975 |
| HaeII | RGCGCY | 2 cut(s) | 8, 235 |
| HaeIII | GGCC | 1 cut(s) | 119 |
| HapII | CCGG | 4 cut(s) | 55, 468, 564, 846 |
| HgaI | GACGC | 2 cut(s) | 77, 1195 |
| HhaI | GCGC | 2 cut(s) | 7, 234 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 4 cut(s) | 84, 303, 333, 381 |
| Hin6I | GCGC | 2 cut(s) | 5, 232 |
| HinP1I | GCGC | 2 cut(s) | 5, 232 |
| HindIII | AAGCTT | 2 cut(s) | 238, 797 |
| HpaII | CCGG | 4 cut(s) | 55, 468, 564, 846 |
| HphI | GGTGA | 2 cut(s) | 578, 1082 |
| Hpy166II | GTNNAC | 3 cut(s) | 525, 1021, 1210 |
| Hpy188I | TCNGA | 5 cut(s) | 160, 295, 607, 822, 897 |
| Hpy188III | TCNNGA | 4 cut(s) | 398, 554, 954, 1044 |
| Hpy8I | GTNNAC | 3 cut(s) | 525, 1021, 1210 |
| Hpy99I | CGWCG | 1 cut(s) | 182 |
| HpyAV | CCTTC | 2 cut(s) | 136, 817 |
| HpyCH4III | ACNGT | 4 cut(s) | 832, 1102, 1115, 1199 |
| HpyCH4IV | ACGT | 1 cut(s) | 804 |
| HpyCH4V | TGCA | 6 cut(s) | 73, 174, 267, 771, 872, 1128 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 805 |
| HpyF3I | CTNAG | 3 cut(s) | 215, 809, 1063 |
| HpySE526I | ACGT | 1 cut(s) | 804 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 4 cut(s) | 84, 303, 333, 381 |
| HspAI | GCGC | 2 cut(s) | 5, 232 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| Ksp22I | TGATCA | 2 cut(s) | 966, 1144 |
| Kzo9I | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| LmnI | GCTCC | 1 cut(s) | 229 |
| Lsp1109I | GCAGC | 2 cut(s) | 35, 202 |
| LweI | GCATC | 4 cut(s) | 82, 254, 780, 1273 |
| MaeI | CTAG | 5 cut(s) | 102, 444, 554, 690, 1091 |
| MaeII | ACGT | 1 cut(s) | 804 |
| MaeIII | GTNAC | 4 cut(s) | 398, 814, 826, 943 |
| MalI | GATC | 9 cut(s) | 220, 335, 426, 539, 968, 1032, 1089, 1146, 1222 |
| MboI | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| MboII | GAAGA | 8 cut(s) | 44, 47, 142, 536, 672, 1003, 1180, 1279 |
| MflI | RGATCY | 3 cut(s) | 424, 537, 1087 |
| MluCI | AATT | 3 cut(s) | 43, 1036, 1123 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 2 cut(s) | 457, 1180 |
| MmeI | TCCRAC | 2 cut(s) | 344, 468 |
| Mph1103I | ATGCAT | 2 cut(s) | 75, 269 |
| MseI | TTAA | 7 cut(s) | 236, 621, 744, 752, 786, 1278, 1327 |
| MslI | CAYNNNNRTG | 1 cut(s) | 776 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MspCI | CTTAAG | 1 cut(s) | 235 |
| MspI | CCGG | 4 cut(s) | 55, 468, 564, 846 |
| MssI | GTTTAAAC | 1 cut(s) | 745 |
| Mva1269I | GAATGC | 1 cut(s) | 1010 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 805 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NcoI | CCATGG | 1 cut(s) | 329 |
| NdeII | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| NlaIII | CATG | 4 cut(s) | 84, 303, 333, 381 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 479, 539, 987 |
| NmuCI | GTSAC | 3 cut(s) | 398, 826, 943 |
| NsiI | ATGCAT | 2 cut(s) | 75, 269 |
| PaeR7I | CTCGAG | 1 cut(s) | 528 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1106, 1203 |
| PctI | GAATGC | 1 cut(s) | 1010 |
| PinAI | ACCGGT | 1 cut(s) | 563 |
| PkrI | GCNGC | 2 cut(s) | 25, 192 |
| PleI | GAGTC | 2 cut(s) | 456, 1179 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PmeI | GTTTAAAC | 1 cut(s) | 745 |
| PpsI | GAGTC | 2 cut(s) | 456, 1179 |
| Ppu21I | YACGTR | 1 cut(s) | 805 |
| PsiI | TTATAA | 1 cut(s) | 912 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 479, 539, 987 |
| PspPI | GGNCC | 2 cut(s) | 490, 1234 |
| PspXI | VCTCGAGB | 1 cut(s) | 528 |
| PsuI | RGATCY | 3 cut(s) | 424, 537, 1087 |
| PvuII | CAGCTG | 1 cut(s) | 26 |
| RsaI | GTAC | 2 cut(s) | 198, 389 |
| RsaNI | GTAC | 2 cut(s) | 197, 388 |
| RseI | CAYNNNNRTG | 1 cut(s) | 776 |
| SaqAI | TTAA | 7 cut(s) | 236, 621, 744, 752, 786, 1278, 1327 |
| SatI | GCNGC | 2 cut(s) | 24, 191 |
| Sau3AI | GATC | 9 cut(s) | 218, 333, 424, 537, 966, 1030, 1087, 1144, 1220 |
| Sau96I | GGNCC | 2 cut(s) | 490, 1234 |
| SchI | GAGTC | 2 cut(s) | 457, 1180 |
| SfaNI | GCATC | 4 cut(s) | 82, 254, 780, 1273 |
| SfcI | CTRYAG | 1 cut(s) | 727 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| Sfr274I | CTCGAG | 1 cut(s) | 528 |
| SinI | GGWCC | 2 cut(s) | 490, 1234 |
| SlaI | CTCGAG | 1 cut(s) | 528 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 776 |
| SmlI | CTYRAG | 4 cut(s) | 18, 235, 528, 918 |
| SmoI | CTYRAG | 4 cut(s) | 18, 235, 528, 918 |
| Sse9I | AATT | 3 cut(s) | 43, 1036, 1123 |
| SsiI | CCGC | 3 cut(s) | 548, 635, 889 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspI | AATATT | 1 cut(s) | 685 |
| SspMI | CTAG | 5 cut(s) | 102, 444, 554, 690, 1091 |
| StyI | CCWWGG | 1 cut(s) | 329 |
| TaaI | ACNGT | 4 cut(s) | 832, 1102, 1115, 1199 |
| TaiI | ACGT | 1 cut(s) | 807 |
| TaqI | TCGA | 6 cut(s) | 221, 256, 529, 774, 1219, 1265 |
| TasI | AATT | 3 cut(s) | 43, 1036, 1123 |
| TatI | WGTACW | 2 cut(s) | 196, 387 |
| Tru1I | TTAA | 7 cut(s) | 236, 621, 744, 752, 786, 1278, 1327 |
| Tru9I | TTAA | 7 cut(s) | 236, 621, 744, 752, 786, 1278, 1327 |
| TscAI | CASTG | 2 cut(s) | 835, 867 |
| TseFI | GTSAC | 3 cut(s) | 398, 826, 943 |
| TseI | GCWGC | 2 cut(s) | 23, 190 |
| Tsp45I | GTSAC | 3 cut(s) | 398, 826, 943 |
| TspDTI | ATGAA | 9 cut(s) | 242, 366, 497, 609, 735, 1029, 1065, 1133, 1142 |
| TspRI | CASTG | 2 cut(s) | 835, 867 |
| Vha464I | CTTAAG | 1 cut(s) | 235 |
| VpaK11BI | GGWCC | 2 cut(s) | 490, 1234 |
| XbaI | TCTAGA | 1 cut(s) | 553 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 327 |
| XhoI | CTCGAG | 1 cut(s) | 528 |
| XmiI | GTMKAC | 2 cut(s) | 1020, 1209 |
| XspI | CTAG | 5 cut(s) | 102, 444, 554, 690, 1091 |
| Zsp2I | ATGCAT | 2 cut(s) | 75, 269 |