Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000658

Physical Location & Seq

Genomic Coordinates Forward (+)

22773271 .. 22776097

Gene Structure 2827 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00018640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGATTTGCCTTCTTCAGATATAGTGACTGAAGACCACCATACCAAAAGAAAAGAGAAACGAAGGAGGACTGACGACGTCAACAAAGAAAGAAAGAGACAGAGAACGTCGACGGTCGACCGCCTGACTGAAGAGAAGAAGATTAAAAGGACTGAAGGAAGTAATGACGCCCACCCGATGAAACGAAAAGATAAAAGAACAAGAATGCCTGACAACGACCTGAAAAAGGAAAATAAGAGACAAAGAACCAAAGAGAAAAAGTTTGATCAGGTTCACACAGCCATCAAGCACCTCATGTCCGCCGTCGACGGTGGTAGTGTTCGCTCAAAAAATCGTCTCGGCTACGTGTCATTCGGCCGAGGTTACGAGTTTGCGCTGATCCGACTTCTAATCGCAGACCGTGGGCCGAGGAAGGATCGATCTCGGCCGCGGGGTTCTCTCTCGCCTTGGATGCAAGGACTTTACACGATTCTCGCTTTGCTAGCCGGAGTGTTCGTGCCGTGCAACTCGGTTCAAACAGGTAGTAGGCCTGAAGATCTTGTAAGGTTGACGGATGGCAACCCTGTGGTGGTGGAGATCAGTGAGCCCAAGTGCGTTGAGTATTTGAACAAGATACATGACCAAATTGTTGAGCTAAAACAAAATAGTTTCAAAAAAAGAAAAGCAAATTGGTCTGGGCTTCCCACTGAGCTTCTAGAGTCCATATTGAAAAAGCTTATACCTTCTGAATTTGACATCCTTGGCTTTAGACATATCCTATATTTTAAAGCCGTTTGTCATTCCTGGAGAACCGCTGCAAAATCTTGTAGCTCTTACGTTCTGTTGCCTCGAACTTCGTGTCTCTTGCATCATGAAAACAACTCCTCCCTCTTTGATCCCATAGGAAAGAAGGTGCACAAGATCAGGAACATCTGTGACTTTTTTTCTGAAGCCACCTGGGTCGGTTCATCATATGGGTGGATTGTCATGTTTTACCAAGACGAAGATTTGAAAGAATCAATGGCACATGTTTTTAACCCGATTTCAAGAGCCAGCATTCCGATCCCAGGCACAAAGACCCTTCCTAACTACAACCATGGAGACCAAATTTCTAAAGCTATTGTTTCGTCTAATCGGTCTAGCTACAACCTTGGAGACCAAATTTCTAAAGCTATTGTTTCGTCCAATCGATCTAGCAACAAGAACTATGTTGTGGTAGTGGAATATGATGGAAATCTAGCATACTATAAGCTTGGAGACGGAGACAAATCATGGAGAAAGTTGGGTGATAATAAGGGTTACAATCCCAAATGTATTATGTTTCACGATGACCAATTAATTGCATTGTCCCAGAGGTTAACTAAGATTTGGAACTTCAACGAATACCCTCCTCAACAACCTCGACATATTGAAGACTCTCCTCCCCACAGATGGGTTGAAGATACCAATTTGGTTGAAGATAATTTGGTGGAGTCATTGACGGGTGATATTTTACGTTTGGGAAGAAGTATGCAAAAAGGTAGGGATATGACTTCACAGTTTTTTGTGGAAAAGTTAAACTTAGCAGAAGGAACATGGGAAAATGTGCAAAATTTAGGCGACCAGAGCTTATACCTGTTTCGTGAGCATTTAATGTCATTGCCGAACCCATGTTTCTTAGGATGTGAGAAAAACTCAATCTACTTCATAACAACAAAAAACGAATATGGAATATACAACCTTGATGAAGCTATAGAAAGTAGGAAAGGTTCATTTAGTGAAAATGTAAATTTTAATGCTTCTCGTAAACCCTTATGGATTGTTCCTAATCCATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0014070 GO:0016567 GO:0016740 GO:0019005 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023052 GO:0023056 GO:0030163 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032870 GO:0032991 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048545 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1900457 GO:1900459 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

598

Amino Acids

68.89

Weight (kDa)

9.35

Isoelectric Point (pI)

46.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	291 - 566	2e-34	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10110 AT1G27540 AT1G27540 AT1G27540 AT1G27580 AT1G67160 AT1G69090 AT2G03560 AT2G03580 AT2G03610 AT2G04810 AT2G04830 AT2G04840 AT2G05970 AT2G14290 AT2G14500 AT2G24080 AT2G33190 AT2G33200 AT3G03726 AT3G03726 AT3G03730 AT3G22333 AT3G22337 AT3G22345 AT4G10820 AT4G12810 AT4G12820 AT4G14165 AT4G17565 AT4G22035 AT4G22060 AT4G22165 AT4G22170 AT4G22180 AT4G22660 AT5G14160 AT5G25290 AT5G25300 AT5G38270 AT5G66830
fragaria_vesca	FvH4_1g02012 FvH4_1g02041 FvH4_1g02212 FvH4_1g02521 FvH4_1g02622 FvH4_1g23804 FvH4_7g23891
rosa_chinensis	RchiOBHm_Chr6g0254461 RchiOBHm_Chr6g0254471 RchiOBHm_Chr6g0254481
rosa_laevigata	RLG00000014912 RLG00000015833 RLG00000015855
rosa_multiflora	Rmu_sc0002296.1_g000011 Rmu_sc0009578.1_g000007 Rmu_sc0009578.1_g000009 Rmu_sc0017669.1_g000012 Rmu_ssc0000481.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018640 Rroxscaffold_2G00153700 Rroxscaffold_7G00210770
rosa_rugosa	Rorug01G0474100.1 Rorug01G0474200
rosa_samantha	Rh2BG027100 Rh2DG027600 Rh2DG027700 Rh5AG407300 Rh5BG420500 Rh6AG069500 Rh6AG069700 Rh6BG062100 Rh6BG062300
rosa_wichuraiana	Rw2G002180 Rw5G038360 Rw6G006110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	81
AccI	GTMKAC	3 cut(s)	110, 117, 306
AccII	CGCG	1 cut(s)	430
AciI	CCGC	5 cut(s)	121, 300, 428, 430, 792
AclWI	GGATC	4 cut(s)	373, 423, 869, 1036
AcoI	YGGCCR	2 cut(s)	355, 425
AcsI	RAATTY	5 cut(s)	728, 1086, 1140, 1570, 1747
AcuI	CTGAAG	5 cut(s)	51, 150, 174, 552, 948
AcyI	GRCGYC	2 cut(s)	78, 168
AfiI	CCNNNNNNNGG	5 cut(s)	226, 568, 1046, 1410, 1411
AflIII	ACRYGT	2 cut(s)	345, 1006
AjnI	CCWGG	3 cut(s)	782, 935, 1045
AjuI	GAANNNNNNNTTGG	2 cut(s)	652, 684
Alw21I	GWGCWC	1 cut(s)	897
Alw26I	GTCTC	8 cut(s)	91, 232, 341, 845, 1074, 1128, 1230, 1236
Alw44I	GTGCAC	1 cut(s)	893
AlwI	GGATC	4 cut(s)	373, 423, 869, 1036
AoxI	GGCC	4 cut(s)	355, 404, 425, 527
ApaLI	GTGCAC	1 cut(s)	893
ApeKI	GCWGC	1 cut(s)	794
ApoI	RAATTY	5 cut(s)	728, 1086, 1140, 1570, 1747
ArsI	GACNNNNNNTTYG	2 cut(s)	823, 855
AseI	ATTAAT	1 cut(s)	1316
AspLEI	GCGC	1 cut(s)	376
AspS9I	GGNCC	1 cut(s)	404
AsuHPI	GGTGA	2 cut(s)	1277, 1475
AsuNHI	GCTAGC	1 cut(s)	481
BaeGI	GKGCMC	1 cut(s)	897
BanII	GRGCYC	1 cut(s)	588
BbsI	GAAGAC	2 cut(s)	39, 1398
Bbv12I	GWGCWC	1 cut(s)	897
BbvI	GCAGC	1 cut(s)	781
BccI	CCATC	4 cut(s)	290, 548, 1202, 1404
BceAI	ACGGC	3 cut(s)	287, 484, 755
BciT130I	CCWGG	3 cut(s)	784, 937, 1047
BclI	TGATCA	1 cut(s)	265
BcoDI	GTCTC	8 cut(s)	91, 232, 341, 845, 1074, 1128, 1230, 1236
BfaI	CTAG	5 cut(s)	482, 695, 1119, 1173, 1217
BfmI	CTRYAG	1 cut(s)	1710
BglII	AGATCT	1 cut(s)	535
BisI	GCNGC	2 cut(s)	428, 795
BlsI	GCNGC	2 cut(s)	429, 796
Bme1390I	CCNGG	3 cut(s)	784, 937, 1047
BmgT120I	GGNCC	1 cut(s)	404
BmrFI	CCNGG	3 cut(s)	784, 937, 1047
BmsI	GCATC	2 cut(s)	441, 856
BmtI	GCTAGC	1 cut(s)	485
BpiI	GAAGAC	2 cut(s)	39, 1398
BplI	GAGNNNNNCTC	2 cut(s)	1637, 1669
BpmI	CTGGAG	1 cut(s)	805
Bsa29I	ATCGAT	2 cut(s)	418, 1168
BsaAI	YACGTR	1 cut(s)	346
BsaBI	GATNNNNATC	1 cut(s)	1212
BsaHI	GRCGYC	2 cut(s)	78, 168
BsaI	GGTCTC	2 cut(s)	1074, 1128
BsaXI	ACNNNNNCTCC	4 cut(s)	480, 510, 848, 878
Bsc4I	CCNNNNNNNGG	5 cut(s)	226, 568, 1046, 1410, 1411
Bse3DI	GCAATG	1 cut(s)	1616
Bse8I	GATNNNNATC	1 cut(s)	1212
BseBI	CCWGG	3 cut(s)	784, 937, 1047
BseCI	ATCGAT	2 cut(s)	418, 1168
BseGI	GGATG	4 cut(s)	456, 559, 735, 1646
BseJI	GATNNNNATC	1 cut(s)	1212
BseLI	CCNNNNNNNGG	5 cut(s)	226, 568, 1046, 1410, 1411
BseMI	GCAATG	1 cut(s)	1616
BseMII	CTCAG	1 cut(s)	678
BseRI	GAGGAG	3 cut(s)	853, 1359, 1389
BseSI	GKGCMC	1 cut(s)	897
BseX3I	CGGCCG	2 cut(s)	355, 425
BseXI	GCAGC	1 cut(s)	781
Bsh1236I	CGCG	1 cut(s)	430
Bsh1285I	CGRYCG	4 cut(s)	117, 121, 358, 428
BshFI	GGCC	4 cut(s)	357, 406, 427, 529
BshVI	ATCGAT	2 cut(s)	418, 1168
BsiEI	CGRYCG	4 cut(s)	117, 121, 358, 428
BsiHKAI	GWGCWC	1 cut(s)	897
BsiSI	CCGG	1 cut(s)	486
BslFI	GGGAC	1 cut(s)	1312
BslI	CCNNNNNNNGG	5 cut(s)	226, 568, 1046, 1410, 1411
BsmAI	GTCTC	8 cut(s)	91, 232, 341, 845, 1074, 1128, 1230, 1236
BsmBI	CGTCTC	2 cut(s)	341, 1230
BsmFI	GGGAC	1 cut(s)	1312
BsmI	GAATGC	2 cut(s)	210, 1035
BsnI	GGCC	4 cut(s)	357, 406, 427, 529
Bso31I	GGTCTC	2 cut(s)	1074, 1128
Bsp1286I	GDGCHC	2 cut(s)	588, 897
Bsp19I	CCATGG	2 cut(s)	1075, 1790
BspACI	CCGC	5 cut(s)	121, 300, 428, 430, 792
BspANI	GGCC	4 cut(s)	357, 406, 427, 529
BspCNI	CTCAG	1 cut(s)	679
BspDI	ATCGAT	2 cut(s)	418, 1168
BspFNI	CGCG	1 cut(s)	430
BspHI	TCATGA	1 cut(s)	850
BspOI	GCTAGC	1 cut(s)	485
BspPI	GGATC	4 cut(s)	373, 423, 869, 1036
BspTNI	GGTCTC	2 cut(s)	1074, 1128
BsrDI	GCAATG	1 cut(s)	1616
BssNI	GRCGYC	2 cut(s)	78, 168
BssT1I	CCWWGG	5 cut(s)	446, 739, 1075, 1129, 1790
Bst2UI	CCWGG	3 cut(s)	784, 937, 1047
Bst4CI	ACNGT	4 cut(s)	115, 311, 401, 1518
Bst6I	CTCTTC	1 cut(s)	126
BstACI	GRCGYC	2 cut(s)	78, 168
BstBAI	YACGTR	1 cut(s)	346
BstC8I	GCNNGC	2 cut(s)	483, 1033
BstDEI	CTNAG	4 cut(s)	687, 1341, 1540, 1636
BstDSI	CCRYGG	4 cut(s)	400, 428, 1075, 1790
BstENI	CCTNNNNNAGG	1 cut(s)	224
BstF5I	GGATG	4 cut(s)	456, 559, 735, 1646
BstFNI	CGCG	1 cut(s)	430
BstHHI	GCGC	1 cut(s)	376
BstMAI	GTCTC	8 cut(s)	91, 232, 341, 845, 1074, 1128, 1230, 1236
BstMCI	CGRYCG	4 cut(s)	117, 121, 358, 428
BstMWI	GCNNNNNNNGC	3 cut(s)	451, 482, 1584
BstNI	CCWGG	3 cut(s)	784, 937, 1047
BstNSI	RCATGY	1 cut(s)	1010
BstSCI	CCNGG	3 cut(s)	782, 935, 1045
BstSFI	CTRYAG	1 cut(s)	1710
BstSLI	GKGCMC	1 cut(s)	897
BstUI	CGCG	1 cut(s)	430
BstV1I	GCAGC	1 cut(s)	781
BstV2I	GAAGAC	2 cut(s)	39, 1398
BstX2I	RGATCY	1 cut(s)	535
BstYI	RGATCY	1 cut(s)	535
BstZI	CGGCCG	2 cut(s)	355, 425
Bsu15I	ATCGAT	2 cut(s)	418, 1168
BsuRI	GGCC	4 cut(s)	357, 406, 427, 529
BsuTUI	ATCGAT	2 cut(s)	418, 1168
BtgI	CCRYGG	4 cut(s)	400, 428, 1075, 1790
BtsCI	GGATG	4 cut(s)	456, 559, 735, 1646
BtsIMutI	CAGTG	2 cut(s)	586, 684
Cac8I	GCNNGC	2 cut(s)	483, 1033
CciI	TCATGA	1 cut(s)	850
CfoI	GCGC	1 cut(s)	376
Cfr13I	GGNCC	1 cut(s)	404
Cfr42I	CCGCGG	1 cut(s)	431
ClaI	ATCGAT	2 cut(s)	418, 1168
CseI	GACGC	1 cut(s)	176
DdeI	CTNAG	4 cut(s)	687, 1341, 1540, 1636
DraI	TTTAAA	1 cut(s)	766
EaeI	YGGCCR	2 cut(s)	355, 425
EagI	CGGCCG	2 cut(s)	355, 425
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
EciI	GGCGGA	1 cut(s)	289
EclXI	CGGCCG	2 cut(s)	355, 425
Eco130I	CCWWGG	5 cut(s)	446, 739, 1075, 1129, 1790
Eco147I	AGGCCT	1 cut(s)	529
Eco24I	GRGCYC	1 cut(s)	588
Eco31I	GGTCTC	2 cut(s)	1074, 1128
Eco52I	CGGCCG	2 cut(s)	355, 425
Eco57I	CTGAAG	5 cut(s)	51, 150, 174, 552, 948
EcoNI	CCTNNNNNAGG	1 cut(s)	224
EcoRII	CCWGG	3 cut(s)	782, 935, 1045
EcoT14I	CCWWGG	5 cut(s)	446, 739, 1075, 1129, 1790
EcoT38I	GRGCYC	1 cut(s)	588
ErhI	CCWWGG	5 cut(s)	446, 739, 1075, 1129, 1790
Esp3I	CGTCTC	2 cut(s)	341, 1230
FalI	AAGNNNNNCTT	2 cut(s)	1523, 1555
FaqI	GGGAC	1 cut(s)	1312
FauI	CCCGC	1 cut(s)	423
FauNDI	CATATG	1 cut(s)	952
FbaI	TGATCA	1 cut(s)	265
FblI	GTMKAC	3 cut(s)	110, 117, 306
Fnu4HI	GCNGC	2 cut(s)	428, 795
FokI	GGATG	4 cut(s)	463, 566, 722, 1653
FriOI	GRGCYC	1 cut(s)	588
Fsp4HI	GCNGC	2 cut(s)	428, 795
FspBI	CTAG	5 cut(s)	482, 695, 1119, 1173, 1217
GlaI	GCGC	1 cut(s)	375
GluI	GCNGC	2 cut(s)	428, 795
GsuI	CTGGAG	1 cut(s)	805
HaeIII	GGCC	4 cut(s)	357, 406, 427, 529
HapII	CCGG	1 cut(s)	486
HgaI	GACGC	1 cut(s)	176
HhaI	GCGC	1 cut(s)	376
Hin1I	GRCGYC	2 cut(s)	78, 168
Hin6I	GCGC	1 cut(s)	374
HinP1I	GCGC	1 cut(s)	374
HincII	GTYRAC	6 cut(s)	82, 111, 118, 307, 549, 1338
HindII	GTYRAC	6 cut(s)	82, 111, 118, 307, 549, 1338
HindIII	AAGCTT	2 cut(s)	713, 1229
HinfI	GANTC	5 cut(s)	469, 698, 995, 1394, 1451
HpaI	GTTAAC	1 cut(s)	1338
HpaII	CCGG	1 cut(s)	486
HphI	GGTGA	2 cut(s)	1277, 1475
Hpy166II	GTNNAC	9 cut(s)	82, 111, 118, 274, 307, 549, 895, 1338, 1766
Hpy188I	TCNGA	5 cut(s)	19, 383, 727, 928, 1041
Hpy188III	TCNNGA	6 cut(s)	695, 851, 904, 1026, 1304, 1601
Hpy8I	GTNNAC	9 cut(s)	82, 111, 118, 274, 307, 549, 895, 1338, 1766
Hpy99I	CGWCG	5 cut(s)	80, 112, 115, 308, 311
HpyAV	CCTTC	8 cut(s)	21, 57, 149, 406, 732, 883, 1070, 1541
HpyCH4III	ACNGT	4 cut(s)	115, 311, 401, 1518
HpyCH4IV	ACGT	5 cut(s)	78, 107, 345, 816, 1474
HpyCH4V	TGCA	8 cut(s)	454, 504, 797, 847, 895, 1322, 1492, 1567
HpyF10VI	GCNNNNNNNGC	3 cut(s)	451, 482, 1584
HpyF3I	CTNAG	4 cut(s)	687, 1341, 1540, 1636
HpySE526I	ACGT	5 cut(s)	78, 107, 345, 816, 1474
Hsp92I	GRCGYC	2 cut(s)	78, 168
HspAI	GCGC	1 cut(s)	374
Ksp22I	TGATCA	1 cut(s)	265
KspAI	GTTAAC	1 cut(s)	1338
KspI	CCGCGG	1 cut(s)	431
Lsp1109I	GCAGC	1 cut(s)	781
LweI	GCATC	2 cut(s)	441, 856
MaeI	CTAG	5 cut(s)	482, 695, 1119, 1173, 1217
MaeII	ACGT	5 cut(s)	78, 107, 345, 816, 1474
MaeIII	GTNAC	4 cut(s)	25, 362, 914, 1277
MflI	RGATCY	1 cut(s)	535
MhlI	GDGCHC	2 cut(s)	588, 897
MlyI	GAGTC	3 cut(s)	707, 1388, 1460
MmeI	TCCRAC	1 cut(s)	406
MseI	TTAA	8 cut(s)	144, 765, 1014, 1316, 1337, 1535, 1610, 1752
MslI	CAYNNNNRTG	1 cut(s)	955
MspA1I	CMGCKG	2 cut(s)	430, 794
MspI	CCGG	1 cut(s)	486
MspR9I	CCNGG	3 cut(s)	784, 937, 1047
Mva1269I	GAATGC	2 cut(s)	210, 1035
MvaI	CCWGG	3 cut(s)	784, 937, 1047
MvnI	CGCG	1 cut(s)	430
MwoI	GCNNNNNNNGC	3 cut(s)	451, 482, 1584
NcoI	CCATGG	2 cut(s)	1075, 1790
NdeI	CATATG	1 cut(s)	952
NheI	GCTAGC	1 cut(s)	481
NmeAIII	GCCGAG	4 cut(s)	318, 383, 403, 432
NmuCI	GTSAC	2 cut(s)	25, 914
NspI	RCATGY	1 cut(s)	1010
PagI	TCATGA	1 cut(s)	850
PceI	AGGCCT	1 cut(s)	529
PciI	ACATGT	1 cut(s)	1006
PctI	GAATGC	2 cut(s)	210, 1035
PfeI	GAWTC	2 cut(s)	469, 995
PflFI	GACNNNGTC	1 cut(s)	77
PfoI	TCCNGGA	1 cut(s)	782
PkrI	GCNGC	2 cut(s)	429, 796
PleI	GAGTC	3 cut(s)	706, 1388, 1459
PpsI	GAGTC	3 cut(s)	706, 1388, 1459
Ppu21I	YACGTR	1 cut(s)	346
PscI	ACATGT	1 cut(s)	1006
PshBI	ATTAAT	1 cut(s)	1316
Psp6I	CCWGG	3 cut(s)	782, 935, 1045
PspGI	CCWGG	3 cut(s)	782, 935, 1045
PspPI	GGNCC	1 cut(s)	404
PsrI	GAACNNNNNNTAC	2 cut(s)	1711, 1743
PsuI	RGATCY	1 cut(s)	535
PsyI	GACNNNGTC	1 cut(s)	77
RseI	CAYNNNNRTG	1 cut(s)	955
SacII	CCGCGG	1 cut(s)	431
SalI	GTCGAC	3 cut(s)	109, 116, 305
SaqAI	TTAA	8 cut(s)	144, 765, 1014, 1316, 1337, 1535, 1610, 1752
SatI	GCNGC	2 cut(s)	428, 795
Sau96I	GGNCC	1 cut(s)	404
SchI	GAGTC	3 cut(s)	707, 1388, 1460
ScrFI	CCNGG	3 cut(s)	784, 937, 1047
SduI	GDGCHC	2 cut(s)	588, 897
SfaNI	GCATC	2 cut(s)	441, 856
SfcI	CTRYAG	1 cut(s)	1710
Sfr303I	CCGCGG	1 cut(s)	431
SgrBI	CCGCGG	1 cut(s)	431
SgrDI	CGTCGACG	2 cut(s)	109, 305
SmiMI	CAYNNNNRTG	1 cut(s)	955
SseBI	AGGCCT	1 cut(s)	529
SsiI	CCGC	5 cut(s)	121, 300, 428, 430, 792
SspMI	CTAG	5 cut(s)	482, 695, 1119, 1173, 1217
StuI	AGGCCT	1 cut(s)	529
StyD4I	CCNGG	3 cut(s)	782, 935, 1045
StyI	CCWWGG	5 cut(s)	446, 739, 1075, 1129, 1790
TaaI	ACNGT	4 cut(s)	115, 311, 401, 1518
TaiI	ACGT	5 cut(s)	81, 110, 348, 819, 1477
TaqI	TCGA	7 cut(s)	110, 117, 306, 418, 829, 1168, 1381
TaqII	GACCGA	1 cut(s)	1104
TauI	GCSGC	1 cut(s)	430
TfiI	GAWTC	2 cut(s)	469, 995
Tru1I	TTAA	8 cut(s)	144, 765, 1014, 1316, 1337, 1535, 1610, 1752
Tru9I	TTAA	8 cut(s)	144, 765, 1014, 1316, 1337, 1535, 1610, 1752
TscAI	CASTG	2 cut(s)	586, 691
TseFI	GTSAC	2 cut(s)	25, 914
TseI	GCWGC	1 cut(s)	794
Tsp45I	GTSAC	2 cut(s)	25, 914
TspDTI	ATGAA	6 cut(s)	194, 867, 936, 1654, 1719, 1719
TspGWI	ACGGA	2 cut(s)	566, 1254
TspRI	CASTG	2 cut(s)	586, 691
Tth111I	GACNNNGTC	1 cut(s)	77
VneI	GTGCAC	1 cut(s)	893
VspI	ATTAAT	1 cut(s)	1316
XagI	CCTNNNNNAGG	1 cut(s)	224
XapI	RAATTY	5 cut(s)	728, 1086, 1140, 1570, 1747
XbaI	TCTAGA	1 cut(s)	694
XceI	RCATGY	1 cut(s)	1010
XmiI	GTMKAC	3 cut(s)	110, 117, 306
XspI	CTAG	5 cut(s)	482, 695, 1119, 1173, 1217
ZraI	GACGTC	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.