FvH4_7g23891

f-box protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
18533367 .. 18535137
1771 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23891.t1

Sequence Viewer

Length: 1626 bp
ATGGATTTGCAGGCAGATCATAAAAGAAAGAGGACAGACGAAGGGAGGAAAGAAAAAAAGAGACCAAGAACAGCGGCCGACCAAAAAAGAAAGAGGACAGACGAAGGGAGGAAAGAAAAAAAGAGACCAAGAACGGCCGCCGTCGACGAGACGTTTCAGTTTCAGTCAAAAGATGTTGCCTTCGGCGGTCATCCTCGAAAAGAAAGAAGAAGAAGGTCTGACGTTGGGAACACGGAAATTTCGAGGAAAAGGAAGGTCGACCTTATCAAAGATGATAATATGTTTGATAGGTCGACTGAAGCTAGCGTTGACGAAGCTCGTAAGATTCACGCCATGCAGCGCCTCATGTCCGCCGTAAATGGCCTCATGTCCGCCGTAGATGGTGAAAGTAAGCCTGAAGATGAGATAAGTTTGACCGACGAGATTGAGTACTTTAACAAAATCCACGACAAGATTGTTGATCTGAAACAAAAGATTGTTGTTGAGCTGAAACAAAAGAGACTCAAAAAGAGAAGAAAAGCAAATTGGTCTAAGCTTCCCAATGAGCTTCTAGAGTCGATTTTGAAAAAGCTTATACCTTGTGAATTTGACATCGCTGGATTCAGACATATCCGAGAGTTTAAAGCCGTTTGTCAATCCTGGAGAGCCGCTGCAAAATCATGTAGCTCATACGTTCCTTTGCCTCGGACTCCATGTCTCTTGCTTCATGGAAAAACACCAATGTCCTTCCTCATTGATCCCATTGGAAGGAAGGAGCACACAATCAGGAACGTCCATGACTACTGTCCTAATGCCATATGTGTTGGTTCATCATATGGGTGGATTGTCATGTTTTACAGAGAAGATTATTTGGAAGACAGGAAAGCACATCTCTTCAACCCGATTACAAGAGCTAGCATTCCAATCCCAGGTAATCATACCCTTCCTGAACGTTGTCGCATACCTTCTAGAGCTATTATTTCATCCAATCCCTCTTTCAATAAGAACTTTGTTGTGGTAGTGAAATTAAATGGCATACTAGCATACTATAAACATGGAGACGAAGACAAGTCCTGGAAGATACTTAGTGTTAAAGGTGCAGATAATTATAATGTTATGGGATTCGTGTTTCATGATGACCTTTTGCTGGCATCGTCCCCGACAGTTACCAATGTTTGGGACTTCAAGGAATACCCTCCTTTACTTTGTAACCCTATACAGTCTTCATCTGGTGCAAAGTATTTTACCTATTTGATGGAGTCGTCATTGACGGGTGACATCTTACGTCTGATTAAAGAGGTGAAAAACAAGACTTTAAAGTTTAGTGTGGAAAAGCTAAATTTACGAGAAGGCGGAAAATGGGAGAATCTTCAAAGTTTAGGCGACCAGAGTTTATTCTTTTTTAACCAATTGAGTGGATGGCAACTAATGTCATTAACAAACCCGAGTTTTTTAGGATGTGAAAAGAACTCCATCTACTTTGCAGCTAGAGAATTGGATAAATACGCAACATATGATAAATATGCAAGATACGACCTTGAAAAAGGAAAAGTAAAGAGCGTGGGTGAAGAATGTACGATAATGTCATTTAGTGAAAATGTACACATTAATTTAGAACCTTTGTGGATTATTCCTAATCCATGGTGA

Protein Analysis

542

Amino Acids

62.48

Weight (kDa)

9.38

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 259 - 496 2e-30 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1089
AccB7I CCANNNNNTGG 1 cut(s) 1155
AccI GTMKAC 3 cut(s) 144, 258, 293
AciI CCGC 7 cut(s) 74, 138, 186, 351, 372, 648, 1332
AclI AACGTT 1 cut(s) 931
AclWI GGATC 1 cut(s) 731
AcoI YGGCCR 2 cut(s) 75, 135
AcsI RAATTY 3 cut(s) 237, 584, 1318
AcuI CTGAAG 2 cut(s) 318, 417
AfaI GTAC 3 cut(s) 431, 1555, 1581
AfiI CCNNNNNNNGG 4 cut(s) 747, 908, 1126, 1155
AgsI TTSAA 6 cut(s) 565, 877, 979, 1165, 1352, 1520
AhdI GACNNNNNGTC 1 cut(s) 693
AjnI CCWGG 3 cut(s) 638, 907, 1052
AjuI GAANNNNNNNTTGG 4 cut(s) 508, 540, 959, 991
Alw21I GWGCWC 1 cut(s) 759
Alw26I GTCTC 6 cut(s) 55, 118, 143, 493, 701, 1032
AlwI GGATC 1 cut(s) 731
Ama87I CYCGRG 1 cut(s) 1423
AoxI GGCC 3 cut(s) 75, 135, 361
ApeKI GCWGC 3 cut(s) 337, 650, 1463
ApoI RAATTY 3 cut(s) 237, 584, 1318
AseI ATTAAT 1 cut(s) 1587
AspLEI GCGC 1 cut(s) 342
AsuHPI GGTGA 4 cut(s) 395, 1265, 1291, 1556
AsuNHI GCTAGC 2 cut(s) 302, 893
AvaI CYCGRG 1 cut(s) 1423
BbsI GAAGAC 3 cut(s) 861, 1050, 1194
Bbv12I GWGCWC 1 cut(s) 759
BbvI GCAGC 3 cut(s) 349, 637, 1475
BccI CCATC 4 cut(s) 374, 1228, 1392, 1460
BceAI ACGGC 5 cut(s) 125, 150, 338, 359, 611
BciT130I CCWGG 3 cut(s) 640, 909, 1054
BcoDI GTCTC 6 cut(s) 55, 118, 143, 493, 701, 1032
BfaI CTAG 6 cut(s) 303, 551, 894, 948, 1019, 1467
BfoI RGCGCY 1 cut(s) 343
BisI GCNGC 6 cut(s) 75, 138, 338, 648, 651, 1464
BlsI GCNGC 6 cut(s) 76, 139, 339, 649, 652, 1465
BmcAI AGTACT 1 cut(s) 431
Bme1390I CCNGG 3 cut(s) 640, 909, 1054
BmeRI GACNNNNNGTC 1 cut(s) 693
BmeT110I CYCGRG 1 cut(s) 1423
BmrFI CCNGG 3 cut(s) 640, 909, 1054
BmsI GCATC 1 cut(s) 1139
BmtI GCTAGC 2 cut(s) 306, 897
BoxI GACNNNNGTC 1 cut(s) 783
BpiI GAAGAC 3 cut(s) 861, 1050, 1194
BpmI CTGGAG 1 cut(s) 661
BsaI GGTCTC 2 cut(s) 55, 118
BsaJI CCNNGG 3 cut(s) 683, 907, 1619
Bsc4I CCNNNNNNNGG 4 cut(s) 747, 908, 1126, 1155
BseBI CCWGG 3 cut(s) 640, 909, 1054
BseDI CCNNGG 3 cut(s) 683, 907, 1619
BseGI GGATG 4 cut(s) 190, 962, 1403, 1442
BseLI CCNNNNNNNGG 4 cut(s) 747, 908, 1126, 1155
BseX3I CGGCCG 2 cut(s) 75, 135
BseXI GCAGC 3 cut(s) 349, 637, 1475
BsgI GTGCAG 1 cut(s) 1098
Bsh1285I CGRYCG 2 cut(s) 78, 138
BshFI GGCC 3 cut(s) 77, 137, 363
BsiEI CGRYCG 2 cut(s) 78, 138
BsiHKAI GWGCWC 1 cut(s) 759
BsiHKCI CYCGRG 1 cut(s) 1423
BslFI GGGAC 2 cut(s) 1120, 1172
BslI CCNNNNNNNGG 4 cut(s) 747, 908, 1126, 1155
BsmAI GTCTC 6 cut(s) 55, 118, 143, 493, 701, 1032
BsmBI CGTCTC 2 cut(s) 143, 1032
BsmFI GGGAC 2 cut(s) 1120, 1172
BsmI GAATGC 1 cut(s) 897
BsnI GGCC 3 cut(s) 77, 137, 363
Bso31I GGTCTC 2 cut(s) 55, 118
BsoBI CYCGRG 1 cut(s) 1423
Bsp1286I GDGCHC 1 cut(s) 759
Bsp1407I TGTACA 1 cut(s) 1579
Bsp143I GATC 3 cut(s) 16, 460, 736
Bsp19I CCATGG 1 cut(s) 1619
BspACI CCGC 7 cut(s) 74, 138, 186, 351, 372, 648, 1332
BspANI GGCC 3 cut(s) 77, 137, 363
BspHI TCATGA 1 cut(s) 1111
BspOI GCTAGC 2 cut(s) 306, 897
BspPI GGATC 1 cut(s) 731
BspTNI GGTCTC 2 cut(s) 55, 118
BsrGI TGTACA 1 cut(s) 1579
BssECI CCNNGG 3 cut(s) 683, 907, 1619
BssMI GATC 3 cut(s) 16, 460, 736
BssT1I CCWWGG 1 cut(s) 1619
Bst2UI CCWGG 3 cut(s) 640, 909, 1054
Bst4CI ACNGT 3 cut(s) 785, 1144, 1200
Bst6I CTCTTC 1 cut(s) 878
BstAUI TGTACA 1 cut(s) 1579
BstC8I GCNNGC 4 cut(s) 12, 304, 895, 1128
BstDEI CTNAG 2 cut(s) 531, 1064
BstDSI CCRYGG 1 cut(s) 1619
BstF5I GGATG 4 cut(s) 190, 962, 1403, 1442
BstH2I RGCGCY 1 cut(s) 343
BstHHI GCGC 1 cut(s) 342
BstKTI GATC 3 cut(s) 19, 463, 739
BstMAI GTCTC 6 cut(s) 55, 118, 143, 493, 701, 1032
BstMBI GATC 3 cut(s) 16, 460, 736
BstMCI CGRYCG 2 cut(s) 78, 138
BstNI CCWGG 3 cut(s) 640, 909, 1054
BstPAI GACNNNNGTC 1 cut(s) 783
BstSCI CCNGG 3 cut(s) 638, 907, 1052
BstV1I GCAGC 3 cut(s) 349, 637, 1475
BstV2I GAAGAC 3 cut(s) 861, 1050, 1194
BstXI CCANNNNNNTGG 1 cut(s) 1394
BstZI CGGCCG 2 cut(s) 75, 135
BsuRI GGCC 3 cut(s) 77, 137, 363
BtgI CCRYGG 1 cut(s) 1619
BtgZI GCGATG 1 cut(s) 577
BtsCI GGATG 4 cut(s) 190, 962, 1403, 1442
Cac8I GCNNGC 4 cut(s) 12, 304, 895, 1128
CciI TCATGA 1 cut(s) 1111
CfoI GCGC 1 cut(s) 342
Csp6I GTAC 3 cut(s) 430, 1554, 1580
CviQI GTAC 3 cut(s) 430, 1554, 1580
DdeI CTNAG 2 cut(s) 531, 1064
DpnI GATC 3 cut(s) 18, 462, 738
DpnII GATC 3 cut(s) 16, 460, 736
DraI TTTAAA 2 cut(s) 622, 1296
DriI GACNNNNNGTC 1 cut(s) 693
EaeI YGGCCR 2 cut(s) 75, 135
EagI CGGCCG 2 cut(s) 75, 135
Eam1104I CTCTTC 1 cut(s) 878
Eam1105I GACNNNNNGTC 1 cut(s) 693
EarI CTCTTC 1 cut(s) 878
EciI GGCGGA 3 cut(s) 340, 361, 1347
EclXI CGGCCG 2 cut(s) 75, 135
Eco130I CCWWGG 1 cut(s) 1619
Eco31I GGTCTC 2 cut(s) 55, 118
Eco52I CGGCCG 2 cut(s) 75, 135
Eco57I CTGAAG 2 cut(s) 318, 417
Eco88I CYCGRG 1 cut(s) 1423
EcoRII CCWGG 3 cut(s) 638, 907, 1052
EcoT14I CCWWGG 1 cut(s) 1619
ErhI CCWWGG 1 cut(s) 1619
Esp3I CGTCTC 2 cut(s) 143, 1032
FaqI GGGAC 2 cut(s) 1120, 1172
FauNDI CATATG 3 cut(s) 797, 814, 1492
FblI GTMKAC 3 cut(s) 144, 258, 293
Fnu4HI GCNGC 6 cut(s) 75, 138, 338, 648, 651, 1464
FokI GGATG 4 cut(s) 177, 949, 1410, 1449
Fsp4HI GCNGC 6 cut(s) 75, 138, 338, 648, 651, 1464
FspBI CTAG 6 cut(s) 303, 551, 894, 948, 1019, 1467
GlaI GCGC 1 cut(s) 341
GluI GCNGC 6 cut(s) 75, 138, 338, 648, 651, 1464
GsuI CTGGAG 1 cut(s) 661
HaeII RGCGCY 1 cut(s) 343
HaeIII GGCC 3 cut(s) 77, 137, 363
HhaI GCGC 1 cut(s) 342
Hin6I GCGC 1 cut(s) 340
HinP1I GCGC 1 cut(s) 340
HincII GTYRAC 4 cut(s) 145, 259, 294, 310
HindII GTYRAC 4 cut(s) 145, 259, 294, 310
HindIII AAGCTT 2 cut(s) 533, 569
HinfI GANTC 8 cut(s) 325, 501, 554, 600, 688, 1101, 1238, 1345
HphI GGTGA 4 cut(s) 395, 1265, 1291, 1556
Hpy166II GTNNAC 5 cut(s) 145, 259, 294, 310, 1582
Hpy188I TCNGA 6 cut(s) 220, 465, 605, 614, 687, 1269
Hpy188III TCNNGA 5 cut(s) 551, 766, 926, 948, 1112
Hpy8I GTNNAC 5 cut(s) 145, 259, 294, 310, 1582
Hpy99I CGWCG 3 cut(s) 146, 149, 422
HpyCH4III ACNGT 3 cut(s) 785, 1144, 1200
HpyCH4IV ACGT 6 cut(s) 152, 222, 672, 771, 931, 1264
HpyCH4V TGCA 7 cut(s) 10, 337, 653, 1079, 1214, 1463, 1505
HpyF3I CTNAG 2 cut(s) 531, 1064
HpySE526I ACGT 6 cut(s) 152, 222, 672, 771, 931, 1264
HspAI GCGC 1 cut(s) 340
Kzo9I GATC 3 cut(s) 16, 460, 736
LmnI GCTCC 1 cut(s) 754
Lsp1109I GCAGC 3 cut(s) 349, 637, 1475
LweI GCATC 1 cut(s) 1139
MaeI CTAG 6 cut(s) 303, 551, 894, 948, 1019, 1467
MaeII ACGT 6 cut(s) 152, 222, 672, 771, 931, 1264
MaeIII GTNAC 3 cut(s) 1144, 1187, 1253
MalI GATC 3 cut(s) 18, 462, 738
MboI GATC 3 cut(s) 16, 460, 736
MfeI CAATTG 1 cut(s) 1388
MhlI GDGCHC 1 cut(s) 759
MluCI AATT 9 cut(s) 237, 523, 584, 1004, 1084, 1318, 1388, 1472, 1588
MlyI GAGTC 4 cut(s) 495, 563, 682, 1247
MseI TTAA 9 cut(s) 435, 621, 1007, 1071, 1272, 1295, 1383, 1415, 1587
MslI CAYNNNNRTG 1 cut(s) 817
MspA1I CMGCKG 2 cut(s) 74, 650
MspR9I CCNGG 3 cut(s) 640, 909, 1054
MunI CAATTG 1 cut(s) 1388
Mva1269I GAATGC 1 cut(s) 897
MvaI CCWGG 3 cut(s) 640, 909, 1054
NcoI CCATGG 1 cut(s) 1619
NdeI CATATG 3 cut(s) 797, 814, 1492
NdeII GATC 3 cut(s) 16, 460, 736
NheI GCTAGC 2 cut(s) 302, 893
NmuCI GTSAC 1 cut(s) 1253
PagI TCATGA 1 cut(s) 1111
PcsI WCGNNNNNNNCGW 1 cut(s) 239
PctI GAATGC 1 cut(s) 897
PfeI GAWTC 4 cut(s) 325, 600, 1101, 1345
PflMI CCANNNNNTGG 1 cut(s) 1155
PfoI TCCNGGA 2 cut(s) 638, 1052
PkrI GCNGC 6 cut(s) 76, 139, 339, 649, 652, 1465
PleI GAGTC 4 cut(s) 495, 562, 682, 1246
PpsI GAGTC 4 cut(s) 495, 562, 682, 1246
PshAI GACNNNNGTC 1 cut(s) 783
PshBI ATTAAT 1 cut(s) 1587
PsiI TTATAA 1 cut(s) 1089
Psp1406I AACGTT 1 cut(s) 931
Psp6I CCWGG 3 cut(s) 638, 907, 1052
PspGI CCWGG 3 cut(s) 638, 907, 1052
PsrI GAACNNNNNNTAC 2 cut(s) 1439, 1471
RsaI GTAC 3 cut(s) 431, 1555, 1581
RsaNI GTAC 3 cut(s) 430, 1554, 1580
RseI CAYNNNNRTG 1 cut(s) 817
SalI GTCGAC 3 cut(s) 143, 257, 292
SaqAI TTAA 9 cut(s) 435, 621, 1007, 1071, 1272, 1295, 1383, 1415, 1587
SatI GCNGC 6 cut(s) 75, 138, 338, 648, 651, 1464
Sau3AI GATC 3 cut(s) 16, 460, 736
ScaI AGTACT 1 cut(s) 431
SchI GAGTC 4 cut(s) 495, 563, 682, 1247
ScrFI CCNGG 3 cut(s) 640, 909, 1054
SduI GDGCHC 1 cut(s) 759
SfaNI GCATC 1 cut(s) 1139
SgrDI CGTCGACG 1 cut(s) 143
SmiMI CAYNNNNRTG 1 cut(s) 817
Sse9I AATT 9 cut(s) 237, 523, 584, 1004, 1084, 1318, 1388, 1472, 1588
SsiI CCGC 7 cut(s) 74, 138, 186, 351, 372, 648, 1332
SspMI CTAG 6 cut(s) 303, 551, 894, 948, 1019, 1467
StyD4I CCNGG 3 cut(s) 638, 907, 1052
StyI CCWWGG 1 cut(s) 1619
TaaI ACNGT 3 cut(s) 785, 1144, 1200
TaiI ACGT 6 cut(s) 155, 225, 675, 774, 934, 1267
TaqI TCGA 6 cut(s) 144, 196, 242, 258, 293, 557
TaqII GACCGA 1 cut(s) 431
TasI AATT 9 cut(s) 237, 523, 584, 1004, 1084, 1318, 1388, 1472, 1588
TatI WGTACW 2 cut(s) 429, 1579
TauI GCSGC 3 cut(s) 77, 140, 650
TfiI GAWTC 4 cut(s) 325, 600, 1101, 1345
Tru1I TTAA 9 cut(s) 435, 621, 1007, 1071, 1272, 1295, 1383, 1415, 1587
Tru9I TTAA 9 cut(s) 435, 621, 1007, 1071, 1272, 1295, 1383, 1415, 1587
TseFI GTSAC 1 cut(s) 1253
TseI GCWGC 3 cut(s) 337, 650, 1463
Tsp45I GTSAC 1 cut(s) 1253
TspDTI ATGAA 5 cut(s) 695, 798, 951, 1100, 1194
TspGWI ACGGA 1 cut(s) 248
Van91I CCANNNNNTGG 1 cut(s) 1155
VspI ATTAAT 1 cut(s) 1587
XapI RAATTY 3 cut(s) 237, 584, 1318
XbaI TCTAGA 2 cut(s) 550, 947
XmiI GTMKAC 3 cut(s) 144, 258, 293
XspI CTAG 6 cut(s) 303, 551, 894, 948, 1019, 1467
ZrmI AGTACT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.